Clone Name	rbasd0e10
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	391	e-106
2	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	391	e-106
3	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	391	e-106
4	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	391	e-106
5	gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome...	383	e-103
6	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	383	e-103
7	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	383	e-103
8	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	383	e-103
9	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	383	e-103
10	gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom...	383	e-103
11	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	383	e-103
12	emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4,...	383	e-103
13	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	383	e-103
14	gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N...	383	e-103
15	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	383	e-103
16	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	383	e-103
17	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	383	e-103
18	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	383	e-103
19	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	383	e-103
20	gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen...	383	e-103
21	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	383	e-103
22	dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clon...	383	e-103
23	dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clon...	383	e-103
24	dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clon...	383	e-103
25	dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clon...	383	e-103
26	dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clon...	383	e-103
27	dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clon...	383	e-103
28	dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clon...	383	e-103
29	dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clon...	383	e-103
30	dbj|AK058625.1| Oryza sativa (japonica cultivar-group) cDNA clon...	383	e-103
31	dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clon...	383	e-103
32	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	383	e-103
33	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	383	e-103
34	gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genom...	375	e-101
35	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	367	1e-98
36	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	367	1e-98
37	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	367	1e-98
38	emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa...	367	1e-98
39	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	359	3e-96
40	emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon	359	3e-96
41	emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribo...	359	3e-96
42	ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothet...	293	1e-76
43	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	264	1e-67
44	dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic D...	264	1e-67
45	dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic D...	264	1e-67
46	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	220	2e-54
47	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	220	2e-54
48	gb|DQ481232.1| Populus suaveolens unknown gene	212	4e-52
49	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	212	4e-52
50	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	212	4e-52
51	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	212	4e-52
52	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	212	4e-52
53	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	212	4e-52
54	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	212	4e-52
55	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	212	4e-52
56	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	204	1e-49
57	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	204	1e-49
58	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	204	1e-49
59	gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence	204	1e-49
60	gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence	204	1e-49
61	gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, com...	204	1e-49
62	gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, co...	204	1e-49
63	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	204	1e-49
64	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	204	1e-49
65	gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA...	204	1e-49
66	emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl...	196	2e-47
67	gb|AY582139.1| Panax ginseng chloroplast, complete genome	196	2e-47
68	gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome...	194	9e-47
69	dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome	192	4e-46
70	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	188	6e-45
71	gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5...	186	2e-44
72	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	186	2e-44
73	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	182	4e-43
74	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	182	4e-43
75	gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-2...	182	4e-43
76	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	182	4e-43
77	gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosom...	182	4e-43
78	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	182	4e-43
79	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	182	4e-43
80	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	182	4e-43
81	gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl...	182	4e-43
82	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	182	4e-43
83	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	182	4e-43
84	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	182	4e-43
85	emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ...	182	4e-43
86	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	180	1e-42
87	gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial ...	180	1e-42
88	gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete se...	180	1e-42
89	gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete se...	174	9e-41
90	gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete se...	174	9e-41
91	gb|AC093544.8| Medicago truncatula chloroplast, complete genome,...	174	9e-41
92	gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, comple...	174	9e-41
93	gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complet...	172	3e-40
94	gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, comp...	165	8e-38
95	gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rr...	165	8e-38
96	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	165	8e-38
97	emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5...	163	3e-37
98	gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes	163	3e-37
99	emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single r...	159	5e-36
100	gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA	159	5e-36
101	gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Me...	157	2e-35
102	dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D...	155	8e-35
103	dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic D...	155	8e-35
104	emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of p...	153	3e-34
105	gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete g...	149	5e-33
106	gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge...	149	5e-33
107	emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4,...	149	5e-33
108	emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4,...	149	5e-33
109	emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon...	149	5e-33
110	dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete g...	143	3e-31
111	emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA	141	1e-30
112	gb|AY660566.1| Huperzia lucidula chloroplast, complete genome	141	1e-30
113	dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ...	141	1e-30
114	gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA ...	135	8e-29
115	dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, comple...	135	8e-29
116	dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete ge...	135	8e-29
117	dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S rib...	135	8e-29
118	gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (r...	133	3e-28
119	gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA ...	131	1e-27
120	gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl)...	117	2e-23
121	emb|X59768.1|CA23SRR C.americana 23S rRNA gene	103	3e-19
122	gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal...	101	1e-18
123	gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (r...	101	1e-18
124	gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subun...	98	2e-17
125	gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome	96	6e-17
126	gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl...	94	3e-16
127	gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome	92	1e-15
128	gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subun...	90	4e-15
129	gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (...	88	2e-14
130	gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal R...	88	2e-14
131	gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RN...	88	2e-14
132	emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial se...	86	6e-14
133	gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosoma...	84	2e-13
134	gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (...	84	2e-13
135	gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subu...	82	1e-12
136	gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subu...	82	1e-12
137	gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subu...	82	1e-12
138	gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subu...	82	1e-12
139	gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subu...	82	1e-12
140	gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subu...	82	1e-12
141	gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subu...	82	1e-12
142	gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subu...	82	1e-12
143	gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subun...	82	1e-12
144	gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subun...	82	1e-12
145	gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subun...	82	1e-12
146	gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subun...	82	1e-12
147	gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subun...	82	1e-12
148	gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subun...	82	1e-12
149	gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subun...	82	1e-12
150	gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subun...	82	1e-12
151	gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, comp...	82	1e-12
152	gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribo...	80	4e-12
153	gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosom...	80	4e-12
154	gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal R...	80	4e-12
155	gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subuni...	80	4e-12
156	gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ...	80	4e-12
157	gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal ...	78	2e-11
158	gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, comple...	78	2e-11
159	gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA ...	76	6e-11
160	gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete g...	76	6e-11
161	gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit rib...	76	6e-11
162	gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit rib...	76	6e-11
163	gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete g...	74	2e-10
164	gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosom...	74	2e-10
165	gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subu...	74	2e-10
166	gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome	74	2e-10
167	gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ri...	74	2e-10
168	gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribos...	74	2e-10
169	gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit riboso...	74	2e-10
170	gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (...	74	2e-10
171	gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (...	74	2e-10
172	gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (...	74	2e-10
173	gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl)...	74	2e-10
174	emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA ...	74	2e-10
175	gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA...	72	9e-10
176	gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (...	72	9e-10
177	gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1...	72	9e-10
178	emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gen...	72	9e-10
179	gb|AY033325.1| Uncultured alpha proteobacteria MB13F01 16S ribos...	70	4e-09
180	gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, co...	70	4e-09
181	gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete g...	70	4e-09
182	gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, compl...	70	4e-09
183	gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal R...	70	4e-09
184	emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (...	70	4e-09
185	gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosoma...	68	1e-08
186	gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, pa...	68	1e-08
187	gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-s...	68	1e-08
188	gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subu...	68	1e-08
189	gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-...	68	1e-08
190	gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large sub...	68	1e-08
191	gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large s...	68	1e-08
192	gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large sub...	68	1e-08
193	gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large...	68	1e-08
194	gb|L44123.1|CMJCPRGOL Chlorococcum echinozygotum chloroplast lar...	68	1e-08
195	gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large s...	68	1e-08
196	gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-...	68	1e-08
197	dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome	68	1e-08
198	emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL ...	68	1e-08
199	emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene...	68	1e-08
200	emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene...	68	1e-08
201	emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrn...	68	1e-08
202	emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL ...	68	1e-08
203	gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA g...	68	1e-08
204	gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g...	66	6e-08
205	gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, p...	66	6e-08
206	gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, p...	66	6e-08
207	gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast,...	66	6e-08
208	gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S riboso...	66	6e-08
209	gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S riboso...	66	6e-08
210	gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosoma...	66	6e-08
211	gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA...	66	6e-08
212	gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 ...	66	6e-08
213	gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150...	66	6e-08
214	gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome	66	6e-08
215	emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se...	66	6e-08
216	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	66	6e-08
217	gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subuni...	66	6e-08
218	gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large ...	66	6e-08
219	gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large ...	66	6e-08
220	gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast ...	66	6e-08
221	gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit riboso...	66	6e-08
222	gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast l...	66	6e-08
223	gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit r...	66	6e-08
224	tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloropl...	66	6e-08
225	gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rr...	66	6e-08
226	emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL g...	66	6e-08
227	emb|X68924.1|CHCSRRNX2 Chloroplast Chlamydomonas sp. 66.72 rrnL ...	66	6e-08
228	emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and ...	66	6e-08
229	emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (...	66	6e-08
230	gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome	66	6e-08
231	gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene...	64	2e-07
232	gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large ...	64	2e-07
233	gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large ...	64	2e-07
234	gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ri...	64	2e-07
235	dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome	64	2e-07
236	emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL g...	64	2e-07
237	emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL g...	64	2e-07
238	gb|CP000110.1| Synechococcus sp. CC9605, complete genome	62	9e-07
239	gb|CP000097.1| Synechococcus sp. CC9902, complete genome	62	9e-07
240	gb|AY033324.1| Uncultured alpha proteobacterium MB11C09 16S ribo...	62	9e-07
241	gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosoma...	62	9e-07
242	gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal ...	62	9e-07
243	gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosoma...	62	9e-07
244	gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosom...	62	9e-07
245	gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S riboso...	62	9e-07
246	gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple...	62	9e-07
247	gb|AY264666.1| Arsenophonus endosymbiont of Aleyrodes elevatus 1...	62	9e-07
248	emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast part...	62	9e-07
249	emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen...	62	9e-07
250	emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA...	62	9e-07
251	gb|AF476108.1| Secondary endosymbiont of Planococcus ficus 16S r...	62	9e-07
252	gb|AF476107.1| Secondary endosymbiont of Planococcus citri 16S r...	62	9e-07
253	gb|AE006010.1| Caulobacter crescentus CB15 section 336 of 359 of...	62	9e-07
254	gb|AE005930.1| Caulobacter crescentus CB15 section 256 of 359 of...	62	9e-07
255	gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large s...	62	9e-07
256	gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribos...	62	9e-07
257	gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subu...	62	9e-07
258	gb|AF086621.2|PHYTORNA1 Loofah witches'-broom phytoplasma tRNA-I...	62	9e-07
259	gb|AF410947.1| Bartonella weissi 23S ribosomal RNA gene, partial...	62	9e-07
260	gb|AF410945.1| Bartonella sp. Deer 159/660/1 23S ribosomal RNA g...	62	9e-07
261	dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome	62	9e-07
262	emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp...	62	9e-07
263	emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL ge...	62	9e-07
264	gb|AE015451.1| Pseudomonas putida KT2440 complete genome	62	9e-07
265	gb|U77924.1|SEU77924 Salmonella enterica IIIa 51:z4,z23:- 23S ri...	62	9e-07
266	gb|U77923.1|SEU77923 Salmonella enterica IIIa 23S ribosomal RNA ...	62	9e-07
267	emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA ge...	62	9e-07
268	dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete ge...	62	9e-07
269	gb|L39095.1|BAORG23S Bartonella bacilliformis 23S ribosomal RNA ...	62	9e-07
270	gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribo...	60	4e-06
271	gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S riboso...	60	4e-06
272	gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, ...	60	4e-06
273	gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA ge...	60	4e-06
274	gb|AY587142.1| Arsenophonus endosymbiont of Aleurodicus dugesii ...	60	4e-06
275	gb|AY587141.1| Arsenophonus endosymbiont of Aleyrodes proletella...	60	4e-06
276	gb|AY587140.1| Arsenophonus endosymbiont of Trialeurodes hutchin...	60	4e-06
277	gb|AY264677.1| Arsenophonus endosymbiont of Bemisia sp. 16S ribo...	60	4e-06
278	gb|AY264674.1| Arsenophonus nasoniae 16S ribosomal RNA gene, par...	60	4e-06
279	gb|AY264673.1| Arsenophonus endosymbiont of Australiococcus grev...	60	4e-06
280	gb|AY264671.1| Arsenophonus endosymbiont of Tetraleurodes mori 1...	60	4e-06
281	gb|AY264670.1| Arsenophonus endosymbiont of Tetraleurodes acacia...	60	4e-06
282	gb|AY264669.1| Arsenophonus endosymbiont of Siphoninus phillyrea...	60	4e-06
283	gb|AY264668.1| Arsenophonus endosymbiont of Neomaskellia andropo...	60	4e-06
284	gb|AY264667.1| Arsenophonus endosymbiont of Dialeurodes hongkong...	60	4e-06
285	gb|AY264665.1| Arsenophonus endosymbiont of Aleuroplatus gelatin...	60	4e-06
286	gb|AY264664.1| Arsenophonus endosymbiont of Aleurodicus dispersu...	60	4e-06
287	gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome	60	4e-06
288	gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast larg...	60	4e-06
289	gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-su...	60	4e-06
290	gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast lar...	60	4e-06
291	gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-s...	60	4e-06
292	gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal ...	60	4e-06
293	gb|AF263562.1| Secondary endosymbiont of Heteropsylla texana 16S...	60	4e-06
294	gb|AF263561.1| Secondary endosymbiont of Glycaspis brimblecombei...	60	4e-06
295	gb|AF410938.1| Bartonella clarridgeiae 23S ribosomal RNA gene, p...	60	4e-06
296	dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisu...	60	4e-06
297	dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete...	60	4e-06
298	gb|AY744382.1| Buchnera aphidicola (Cinara cedri) genomic sequence	60	4e-06
299	gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribos...	58	1e-05
300	gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene,...	58	1e-05
301	emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;...	58	1e-05
302	emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;...	58	1e-05
303	emb|BX251412.1| Tropheryma whipplei TW08/27, complete genome; se...	58	1e-05
304	gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-...	58	1e-05
305	gb|L43500.1|RTCCPRRNL Carteria olivieri	58	1e-05
306	gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subun...	58	1e-05
307	gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit rib...	58	1e-05
308	gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribo...	58	1e-05
309	gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ...	58	1e-05
310	gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal...	58	1e-05
311	gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA...	58	1e-05
312	gb|AF207786.1|AF207786 Sinorhizobium meliloti strain LMG 6133 23...	58	1e-05
313	gb|AF190688.1|AF190688 Tropheryma whippelii from patient 3 ribos...	58	1e-05
314	gb|AF190687.1|AF190687 Tropheryma whippelii from patient 2 ribos...	58	1e-05
315	dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complet...	58	1e-05
316	emb|X99636.2|TW16S23S Tropheryma whippelii 16S rRNA, 23S rRNA, 5...	58	1e-05
317	gb|AE014184.1| Tropheryma whipplei str. Twist, complete genome	58	1e-05
318	emb|X68896.1|CHCIRRNX4 Chloroplast Chlamydomonas indica rrnL gen...	58	1e-05
319	emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL g...	58	1e-05
320	emb|X68915.1|CHCMRRNX3 Chloroplast C.moewusii rrnL gene, exon 3	58	1e-05
321	emb|Z17234.1|CHCERRNL Chloroplast Chlamydomonas eugametos rrnL gene	58	1e-05
322	dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome	58	1e-05
323	gb|AY389864.1| Uncultured phototrophic eukaryote large subunit r...	56	6e-05
324	dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g...	56	6e-05
325	emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flankin...	56	6e-05
326	emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (p...	56	6e-05
327	emb|AJ879830.1| Uncultured organism 23S rRNA gene, clone LP4-148	56	6e-05
328	gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome	56	6e-05
329	gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome	54	2e-04
330	gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome	54	2e-04
331	gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA...	54	2e-04
332	gb|AE008594.1| Rickettsia conorii str. Malish 7, section 26 of 1...	54	2e-04
333	gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, co...	54	2e-04
334	gb|DQ499016.1| Clavibacter michiganensis subsp. tessellarius 23S...	54	2e-04
335	gb|AY116931.1| Klebsiella pneumoniae strain ATCC 15830 23S ribos...	54	2e-04
336	gb|AE009348.1| Agrobacterium tumefaciens str. C58 linear chromos...	54	2e-04
337	gb|AE009325.1| Agrobacterium tumefaciens str. C58 linear chromos...	54	2e-04
338	gb|AE009200.1| Agrobacterium tumefaciens str. C58 circular chrom...	54	2e-04
339	gb|AE008980.1| Agrobacterium tumefaciens str. C58 circular chrom...	54	2e-04
340	gb|AE008290.2| Agrobacterium tumefaciens str. C58 linear chromos...	54	2e-04
341	gb|AE008265.2| Agrobacterium tumefaciens str. C58 linear chromos...	54	2e-04
342	gb|U65012.1|PSU65012 Pseudomonas stutzeri 16S rRNA, 23S rRNA, 5S...	54	2e-04
343	gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl...	54	2e-04
344	gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete...	54	2e-04
345	gb|AF268236.2| Uncultured proteobacterium EBAC37G09 16S ribosoma...	54	2e-04
346	gb|AF268216.2| Uncultured proteobacterium EBAC39D12 16S ribosoma...	54	2e-04
347	gb|AF268221.2| Uncultured proteobacterium EBAC46D07 16S ribosoma...	54	2e-04
348	gb|AY033298.1| Uncultured alpha proteobacterium MB11B03 16S ribo...	54	2e-04
349	gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp...	54	2e-04
350	gb|AY458630.1| Uncultured bacterium 106 clone EBAC750-01B07 geno...	54	2e-04
351	gb|AY316688.1| Reichenowia pictae 23S large subunit ribosomal RN...	54	2e-04
352	gb|AY316687.1| Reichenowia ornatae 23S large subunit ribosomal R...	54	2e-04
353	gb|AY316686.1| Reichenowia parasiticae 23S large subunit ribosom...	54	2e-04
354	emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete ch...	54	2e-04
355	emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete ch...	54	2e-04
356	gb|AF548141.1| Primary endosymbiont of Sitophilus zeamais 16S-23...	54	2e-04
357	gb|AF548140.1| Primary endosymbiont of Sitophilus zeamais 16S-23...	54	2e-04
358	gb|AF548139.1| Primary endosymbiont of Sitophilus oryzae 16S-23S...	54	2e-04
359	gb|AF548138.1| Primary endosymbiont of Sitophilus oryzae 16S-23S...	54	2e-04
360	gb|AF548137.1| Primary endosymbiont of Sitophilus oryzae 16S-23S...	54	2e-04
361	gb|AE014075.1| Escherichia coli CFT073, complete genome	54	2e-04
362	gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome	54	2e-04
363	gb|CP000243.1| Escherichia coli UTI89, complete genome	54	2e-04
364	gb|U00096.2| Escherichia coli K-12 MG1655, complete genome	54	2e-04
365	gb|U00006.1|ECOUW89 E. coli chromosomal region from 89.2 to 92.8...	54	2e-04
366	gb|CP000087.1| Rickettsia bellii RML369-C, complete genome	54	2e-04
367	emb|Y13122.2|RCY13122 Rickettsia conorii fmt gene (partial) and ...	54	2e-04
368	gb|AE008895.1| Salmonella typhimurium LT2, section 199 of 220 of...	54	2e-04
369	gb|AE008893.1| Salmonella typhimurium LT2, section 197 of 220 of...	54	2e-04
370	gb|AE008886.1| Salmonella typhimurium LT2, section 190 of 220 of...	54	2e-04
371	gb|AE008881.1| Salmonella typhimurium LT2, section 185 of 220 of...	54	2e-04
372	gb|AE008856.1| Salmonella typhimurium LT2, section 160 of 220 of...	54	2e-04
373	gb|AE008820.1| Salmonella typhimurium LT2, section 124 of 220 of...	54	2e-04
374	gb|AE008706.1| Salmonella typhimurium LT2, section 14 of 220 of ...	54	2e-04
375	emb|AL627278.1| Salmonella enterica serovar Typhi (Salmonella ty...	54	2e-04
376	emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella ty...	54	2e-04
377	emb|AL627282.1| Salmonella enterica serovar Typhi (Salmonella ty...	54	2e-04
378	emb|AL627280.1| Salmonella enterica serovar Typhi (Salmonella ty...	54	2e-04
379	emb|AL627279.1| Salmonella enterica serovar Typhi (Salmonella ty...	54	2e-04
380	emb|AL627266.1| Salmonella enterica serovar Typhi (Salmonella ty...	54	2e-04
381	gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome	54	2e-04
382	gb|L19201.1|ECOUW87 E. coli chromosomal region from 87.2 to 89.2...	54	2e-04
383	gb|AF476109.1| Secondary endosymbiont of Paracoccus nothofagicol...	54	2e-04
384	gb|AF476106.1| Secondary endosymbiont of Melanococcus albizziae ...	54	2e-04
385	gb|AF476099.1| Secondary endosymbiont of Australicoccus greville...	54	2e-04
386	dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome	54	2e-04
387	emb|X06765.1|RARRN23S Ruminobacter amylophilus 23S rRNA	54	2e-04
388	gb|CP000133.1| Rhizobium etli CFN 42, complete genome	54	2e-04
389	gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome	54	2e-04
390	gb|DQ312921.1| Uncultured bacterium clone 3M10E 23S ribosomal RN...	54	2e-04
391	gb|U47356.1|RLU47356 Rhizobium leguminosarum bv. phaseoli 23S ri...	54	2e-04
392	gb|U47355.1|RMU47355 Rhizobium meliloti 23S ribosomal RNA gene, ...	54	2e-04
393	gb|U47354.1|RLU47354 Rhizobium leguminosarum bv. trifolii 23S ri...	54	2e-04
394	gb|U47353.1|RLU47353 Rhizobium leguminosarum bv. trifolii 23S ri...	54	2e-04
395	gb|U47352.1|RLU47352 Rhizobium leguminosarum bv. trifolii 23S ri...	54	2e-04
396	gb|U47349.1|RMU47349 Rhizobium meliloti 23S ribosomal RNA gene, ...	54	2e-04
397	gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple...	54	2e-04
398	gb|CP000249.1| Frankia sp. CcI3, complete genome	54	2e-04
399	gb|AY244382.1| Sinorhizobium kostiense strain USDA 4905 23S ribo...	54	2e-04
400	gb|AY244381.1| Sinorhizobium arboris strain USDA 4878 23S riboso...	54	2e-04
401	gb|AY244378.1| Mycoplana dimorpha strain NRRL B-1091 23S ribosom...	54	2e-04
402	gb|AY244377.1| Rhizobium rhizogenes strain IAM 13570 23S ribosom...	54	2e-04
403	gb|AY244376.1| Rhizobium rubi strain IAM 13569 23S ribosomal RNA...	54	2e-04
404	gb|AY244375.1| Rhizobium huautlense strain USDA 4900 23S ribosom...	54	2e-04
405	gb|AY244374.1| Rhizobium vitis strain IAM 14140 23S ribosomal RN...	54	2e-04
406	gb|AY244373.1| Agrobacterium tumefaciens strain IAM 13129 23S ri...	54	2e-04
407	gb|AY244372.1| Rhizobium etli strain USDA 9032 23S ribosomal RNA...	54	2e-04
408	gb|AY244371.1| Rhizobium tropici strain USDA 9030 23S ribosomal ...	54	2e-04
409	gb|AY244370.1| Rhizobium vitis strain ATCC 49767 23S ribosomal R...	54	2e-04
410	gb|AY244369.1| Sinorhizobium terangae strain USDA 4894 23S ribos...	54	2e-04
411	gb|AY244368.1| Sinorhizobium saheli strain USDA 4893 23S ribosom...	54	2e-04
412	gb|AY244365.1| Rhizobium galegae strain USDA 4128 23S ribosomal ...	54	2e-04
413	gb|AY244362.1| Rhizobium gallicum strain USDA 2918 23S ribosomal...	54	2e-04
414	gb|AY244361.1| Rhizobium leguminosarum strain USDA 2370 23S ribo...	54	2e-04
415	gb|AY244360.1| Sinorhizobium fredii strain USDA 205 23S ribosoma...	54	2e-04
416	emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, co...	54	2e-04
417	emb|AJ549515.2|ECL549515 Enterobacter cloacae partial 23S rRNA g...	54	2e-04
418	emb|AJ549514.1|PAG549514 Pantoea agglomerans partial 23S rRNA ge...	54	2e-04
419	emb|AJ549513.1|KOX549513 Klebsiella oxytoca partial 23S rRNA gen...	54	2e-04
420	emb|AJ549512.1|KPN549512 Klebsiella pneumoniae subsp. pneumoniae...	54	2e-04
421	emb|AJ549511.1|SEN549511 Salmonella enterica subsp. enterica par...	54	2e-04
422	emb|AJ549510.1|CFR549510 Citrobacter freundii partial 23S rRNA g...	54	2e-04
423	emb|AJ549509.1|CDI549509 Citrobacter diversus partial 23S rRNA g...	54	2e-04
424	emb|AJ549508.1|ECO549508 Escherichia coli partial 23S rRNA gene,...	54	2e-04
425	gb|DQ295237.1| Uncultured marine bacterium Ant4D3, partial genom...	54	2e-04
426	gb|AY296732.1| Candidatus Serratia symbiotica 16S ribosomal RNA ...	54	2e-04
427	gb|AY870455.1| Uncultured Francisella sp. clone CB15WT 23S ribos...	54	2e-04
428	gb|AY870454.1| Uncultured Francisella sp. clone K54_5WT 23S ribo...	54	2e-04
429	gb|AY870453.1| Uncultured Francisella sp. clone K58_2HL 23S ribo...	54	2e-04
430	gb|AY870452.1| Uncultured Francisella sp. clone SQ155_15HL 23S r...	54	2e-04
431	gb|AY870451.1| Uncultured Francisella sp. clone CC13_1HL 23S rib...	54	2e-04
432	gb|AY870450.1| Uncultured Francisella sp. clone CC7_3HL 23S ribo...	54	2e-04
433	gb|AY870449.1| Uncultured Francisella sp. clone CC13_2HL 23S rib...	54	2e-04
434	gb|AY870448.1| Uncultured Francisella sp. clone CC11_6HL 23S rib...	54	2e-04
435	emb|AJ626720.1| Acetobacter pasteurianus partial ITS1, strain CC...	54	2e-04
436	dbj|AB102735.2| Agrobacterium tumefaciens rrnD operon genes for ...	54	2e-04
437	dbj|AB102734.2| Agrobacterium tumefaciens rrnC operon genes for ...	54	2e-04
438	dbj|AB102733.2| Agrobacterium tumefaciens rrnB operon genes for ...	54	2e-04
439	dbj|AB102732.2| Agrobacterium tumefaciens rrnA operon genes for ...	54	2e-04
440	gb|AF277076.1|AF277076 Canadian peach X phytoplasma 23S ribosoma...	54	2e-04
441	gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome	54	2e-04
442	gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome	54	2e-04
443	gb|AF209077.1|AF209077 Sinorhizobium meliloti strain alpha18 23S...	54	2e-04
444	gb|AF209076.1|AF209076 Agrobacterium vitis strain Ag 162 23S rib...	54	2e-04
445	gb|AF209075.1|AF209075 Agrobacterium radiobacter strain K84 23S ...	54	2e-04
446	gb|AF209074.1|AF209074 Agrobacterium radiobacter strain 32/1 23S...	54	2e-04
447	gb|AF209073.1|AF209073 Agrobacterium tumefaciens strain 8/1 23S ...	54	2e-04
448	gb|AF209072.1|AF209072 Agrobacterium tumefaciens strain K27 23S ...	54	2e-04
449	gb|AF209071.1|AF209071 Agrobacterium vitis strain LMG 8750 23S r...	54	2e-04
450	gb|AF208483.1|AF208483 Agrobacterium rubi 23S ribosomal RNA gene...	54	2e-04
451	gb|AF208482.1|AF208482 Agrobacterium tumefaciens strain AT4 23S ...	54	2e-04
452	gb|AF208481.1|AF208481 Agrobacterium tumefaciens strain 46 23S r...	54	2e-04
453	gb|AF208480.1|AF208480 Agrobacterium rhizogenes 23S ribosomal RN...	54	2e-04
454	gb|AF208479.1|AF208479 Rhizobium tropici 23S ribosomal RNA gene,...	54	2e-04
455	gb|AF207785.1|AF207785 Rhizobium leguminosarum strain LMG 8820 2...	54	2e-04
456	gb|AF207784.1|AF207784 Agrobacterium radiobacter strain g-114-3-...	54	2e-04
457	gb|AF207783.1|AF207783 Rhizobium galegae strain LMG 6214 23S rib...	54	2e-04
458	gb|AF207782.1|AF207782 Rhizobium leguminosarum 23S ribosomal RNA...	54	2e-04
459	gb|AF205373.1|AF205373 Agrobacterium tumefaciens strain B6 23S r...	54	2e-04
460	gb|AF211871.1|AF211871 Zymobacter palmae 16S ribosomal RNA gene,...	54	2e-04
461	gb|AY146952.1| Francisella tularensis subsp. novicida 23S riboso...	54	2e-04
462	gb|AY146951.1| Francisella tularensis subsp. holarctica 23S ribo...	54	2e-04
463	gb|AY146950.1| Francisella tularensis subsp. tularensis 23S ribo...	54	2e-04
464	gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat...	54	2e-04
465	gb|AF134705.1|AF134705 Pseudomonas fluorescens ribosomal RNA ope...	54	2e-04
466	gb|AF134704.1|AF134704 Pseudomonas fluorescens ribosomal RNA ope...	54	2e-04
467	dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome	54	2e-04
468	dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome	54	2e-04
469	gb|AY309492.1| Roseobacter sp. KT0917 23S ribosomal RNA gene, pa...	54	2e-04
470	gb|AY309491.1| Sphingomonas sp. KT0216 23S ribosomal RNA gene, p...	54	2e-04
471	gb|AY309489.1| Unknown marine alpha proteobacterium JP88.1 23S r...	54	2e-04
472	gb|AY309484.1| Erythrobacter sp. JP13.1 23S ribosomal RNA gene, ...	54	2e-04
473	emb|AJ133712.1|RCA133712 Rickettsia canada 23S rRNA gene, partial	54	2e-04
474	emb|AJ133711.1|RAU133711 Rickettsia australis 23S rRNA gene, par...	54	2e-04
475	emb|Y13129.2|RAY13129 Rickettsia akari fmt gene (partial) and 23...	54	2e-04
476	emb|Y13128.2|RRY13128 Rickettsia rhipicephali fmt gene (partial)...	54	2e-04
477	emb|Y13125.2|RRY13125 Rickettsia rickettsii fmt gene (partial) a...	54	2e-04
478	emb|Y13124.2|RSY13124 Rickettsia sibirica fmt gene (partial) and...	54	2e-04
479	emb|Y13123.2|RPY13123 Rickettsia parkeri fmt gene (partial) and ...	54	2e-04
480	emb|Y10819.1|PFY10819 P. freudenreichii subsp. shermanii partial...	54	2e-04
481	emb|AJ278710.1|ECO278710 Escherichia coli 23S rRNA gene, strain ...	54	2e-04
482	emb|V00348.1|ECRRNBZ E. coli ribosomal operon rrnB encoding the ...	54	2e-04
483	emb|V00331.1|ECRNA3 E. coli gene rrnB (codes for 23S ribosomal RNA)	54	2e-04
484	emb|AJ306884.1|HSA306884 Halomonas salina partial 23S rRNA gene,...	54	2e-04
485	emb|AJ306880.1|HMA306880 Halomonas marina partial 23S rRNA gene,...	54	2e-04
486	emb|AJ306876.1|HDE306876 Halomonas desiderata partial 23S rRNA g...	54	2e-04
487	emb|AJ306875.1|HCU306875 Halomonas cupida partial 23S rRNA gene,...	54	2e-04
488	emb|X89812.1|AX23SRRNA Acetobacter xylinus DNA for 23S ribosomal...	54	2e-04
489	dbj|AK110485.1| Oryza sativa (japonica cultivar-group) cDNA clon...	54	2e-04
490	gb|AF170176.1|STYSTMF1 Salmonella typhimurium fragment STMF1	54	2e-04
491	gb|AF233324.1|STYSTMD1 Salmonella typhimurium fragment STMD1	54	2e-04
492	dbj|AK107373.1| Oryza sativa (japonica cultivar-group) cDNA clon...	54	2e-04
493	gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, ...	54	2e-04
494	gb|AF053968.1|AF053968 Escherichia coli strain A 8190 rrlC opero...	54	2e-04
495	gb|AF053967.1|AF053967 Escherichia coli strain ECOR 24 rrlB oper...	54	2e-04
496	gb|AF053966.1|AF053966 Escherichia coli rrlD operon, complete se...	54	2e-04
497	gb|AF053965.1|AF053965 Escherichia coli strain ECOR 40 rrlB oper...	54	2e-04
498	gb|AF053964.1|AF053964 Escherichia coli strain ECOR 52 rrlD oper...	54	2e-04
499	gb|AF053963.1|AF053963 Escherichia coli strain ECOR 35 rrlC oper...	54	2e-04
500	gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region fro...	54	2e-04

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  391 bits (197), Expect = e-106
 Identities = 203/205 (99%)
 Strand = Plus / Plus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43135 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 43194

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 43195 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 43254

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 43255 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 43314

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 43315 gcagcgcttggtactcggacctcgg 43339



 Score =  391 bits (197), Expect = e-106
 Identities = 203/205 (99%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21982 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 21923

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 21922 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 21863

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 21862 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 21803

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 21802 gcagcgcttggtactcggacctcgg 21778



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 43102 aatagccccgtaacttcggg-ag-aaggggtgccccct 43067



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 22015 aatagccccgtaacttcggg-ag-aaggggtgccccct 22050

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  391 bits (197), Expect = e-106
 Identities = 203/205 (99%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121975 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 122034

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 122035 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 122094

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 122095 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 122154

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 122155 gcagcgcttggtactcggacctcgg 122179



 Score =  391 bits (197), Expect = e-106
 Identities = 203/205 (99%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100862 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 100803

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 100802 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 100743

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 100742 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 100683

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 100682 gcagcgcttggtactcggacctcgg 100658



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 121942 aatagccccgtaacttcggg-ag-aaggggtgccccct 121907



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 100895 aatagccccgtaacttcggg-ag-aaggggtgccccct 100930

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  391 bits (197), Expect = e-106
 Identities = 203/205 (99%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122692 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 122751

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 122752 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 122811

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 122812 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 122871

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 122872 gcagcgcttggtactcggacctcgg 122896



 Score =  391 bits (197), Expect = e-106
 Identities = 203/205 (99%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101539 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 101480

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 101479 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 101420

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 101419 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 101360

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 101359 gcagcgcttggtactcggacctcgg 101335



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 122659 aatagccccgtaacttcggg-ag-aaggggtgccccct 122624



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 101572 aatagccccgtaacttcggg-ag-aaggggtgccccct 101607

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  391 bits (197), Expect = e-106
 Identities = 203/205 (99%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118311 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 118370

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 118371 gaaggtcgttcgagcttttcctgggagtatggcatcagttacatacttcagcgccgtagc 118430

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 118431 gcctggtatgagcctcgtggagaagcaatcgctagtccacggggctcatacttcagcgct 118490

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 118491 gcagcgcttggtactcggacctcgg 118515



 Score =  391 bits (197), Expect = e-106
 Identities = 203/205 (99%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96583 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 96524

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 96523 gaaggtcgttcgagcttttcctgggagtatggcatcagttacatacttcagcgccgtagc 96464

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 96463 gcctggtatgagcctcgtggagaagcaatcgctagtccacggggctcatacttcagcgct 96404

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 96403 gcagcgcttggtactcggacctcgg 96379



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 118278 aatagccccgtaacttcggg-ag-aaggggtgccccct 118243



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 96616 aatagccccgtaacttcggg-ag-aaggggtgccccct 96651

---

>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11,
              complete sequence
          Length = 120228

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 117092 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 117151

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 117152 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 117211

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 117212 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 117271

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 117272 gcagcgcttggtactcggacctcgg 117296



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 117059 aatagccccgtaacttcggg-ag-aaggggtgccccct 117024

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
              complete genome
          Length = 134551

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 118176 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 118235

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118236 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 118295

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 118296 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 118355

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 118356 gcagcgcttggtactcggacctcgg 118380



 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 96980 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 96921

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96920 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 96861

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 96860 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 96801

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 96800 gcagcgcttggtactcggacctcgg 96776



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 118143 aatagccccgtaacttcggg-ag-aaggggtgccccct 118108



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 97013 aatagccccgtaacttcggg-ag-aaggggtgccccct 97048

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
              complete genome
          Length = 134551

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 118176 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 118235

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118236 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 118295

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 118296 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 118355

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 118356 gcagcgcttggtactcggacctcgg 118380



 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 96980 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 96921

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96920 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 96861

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 96860 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 96801

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 96800 gcagcgcttggtactcggacctcgg 96776



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 118143 aatagccccgtaacttcggg-ag-aaggggtgccccct 118108



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 97013 aatagccccgtaacttcggg-ag-aaggggtgccccct 97048

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete
              genome
          Length = 134496

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 118125 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 118184

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118185 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 118244

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 118245 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 118304

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 118305 gcagcgcttggtactcggacctcgg 118329



 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 96925 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 96866

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96865 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 96806

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 96805 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 96746

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 96745 gcagcgcttggtactcggacctcgg 96721



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 118092 aatagccccgtaacttcggg-ag-aaggggtgccccct 118057



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 96958 aatagccccgtaacttcggg-ag-aaggggtgccccct 96993

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                            
Query: 52       cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 31509558 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 31509499

                                                                            
Query: 112      gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 31509498 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 31509439

                                                                            
Query: 172      gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 31509438 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 31509379

                                         
Query: 232      gcagcgcttggtactcggacctcgg 256
                |||||||||||||||||||||||||
Sbjct: 31509378 gcagcgcttggtactcggacctcgg 31509354



 Score =  375 bits (189), Expect = e-101
 Identities = 201/205 (98%)
 Strand = Plus / Plus

                                                                            
Query: 52       cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 27319992 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 27320051

                                                                            
Query: 112      gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 27320052 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 27320111

                                                                            
Query: 172      gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 27320112 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 27320171

                                         
Query: 232      gcagcgcttggtactcggacctcgg 256
                |||| ||||||||||||||||||||
Sbjct: 27320172 gcagtgcttggtactcggacctcgg 27320196



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                      
Query: 19       aatagccccgtaacttcgggnagnaaggggtgccccct 56
                |||||||||||||||||||| || ||||||||||||||
Sbjct: 31509591 aatagccccgtaacttcggg-ag-aaggggtgccccct 31509626

---

>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
             sequence
          Length = 133449

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Plus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 83038 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 83097

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 83098 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 83157

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 83158 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 83217

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 83218 gcagcgcttggtactcggacctcgg 83242



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 83005 aatagccccgtaacttcggg-ag-aaggggtgccccct 82970

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
              complete sequence
          Length = 145980

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 124021 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 123962

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 123961 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 123902

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 123901 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 123842

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 123841 gcagcgcttggtactcggacctcgg 123817



 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 15747 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 15688

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 15687 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 15628

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 15627 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 15568

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 15567 gcagcgcttggtactcggacctcgg 15543



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 124054 aatagccccgtaacttcggg-ag-aaggggtgccccct 124089



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 15780 aatagccccgtaacttcggg-ag-aaggggtgccccct 15815

---

>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21,
              complete sequence
          Length = 167113

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 142555 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 142496

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 142495 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 142436

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 142435 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 142376

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 142375 gcagcgcttggtactcggacctcgg 142351



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 142588 aatagccccgtaacttcggg-ag-aaggggtgccccct 142623

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 95151 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 95092

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 95091 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 95032

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 95031 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 94972

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 94971 gcagcgcttggtactcggacctcgg 94947



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 95184 aatagccccgtaacttcggg-ag-aaggggtgccccct 95219

---

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Plus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 56864 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 56923

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 56924 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 56983

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 56984 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 57043

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 57044 gcagcgcttggtactcggacctcgg 57068



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 56831 aatagccccgtaacttcggg-ag-aaggggtgccccct 56796

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 29215 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 29156

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 29155 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 29096

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 29095 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 29036

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 29035 gcagcgcttggtactcggacctcgg 29011



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 29248 aatagccccgtaacttcggg-ag-aaggggtgccccct 29283

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                           
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
               ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9269907 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 9269848

                                                                           
Query: 112     gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9269847 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 9269788

                                                                           
Query: 172     gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
               ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9269787 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 9269728

                                        
Query: 232     gcagcgcttggtactcggacctcgg 256
               |||||||||||||||||||||||||
Sbjct: 9269727 gcagcgcttggtactcggacctcgg 9269703



 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                           
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
               ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9229407 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 9229348

                                                                           
Query: 112     gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9229347 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 9229288

                                                                           
Query: 172     gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
               ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9229287 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 9229228

                                        
Query: 232     gcagcgcttggtactcggacctcgg 256
               |||||||||||||||||||||||||
Sbjct: 9229227 gcagcgcttggtactcggacctcgg 9229203



 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                           
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
               ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9165995 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 9165936

                                                                           
Query: 112     gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9165935 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 9165876

                                                                           
Query: 172     gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
               ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9165875 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 9165816

                                        
Query: 232     gcagcgcttggtactcggacctcgg 256
               |||||||||||||||||||||||||
Sbjct: 9165815 gcagcgcttggtactcggacctcgg 9165791



 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                           
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
               ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9057821 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 9057762

                                                                           
Query: 112     gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9057761 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 9057702

                                                                           
Query: 172     gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
               ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9057701 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 9057642

                                        
Query: 232     gcagcgcttggtactcggacctcgg 256
               |||||||||||||||||||||||||
Sbjct: 9057641 gcagcgcttggtactcggacctcgg 9057617



 Score =  149 bits (75), Expect = 5e-33
 Identities = 93/99 (93%)
 Strand = Plus / Minus

                                                                            
Query: 158      ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 217
                ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||||
Sbjct: 25661870 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 25661811

                                                       
Query: 218      catacttcagcgctgcagcgcttggtactcggacctcgg 256
                ||||||||||||| ||||||||||||||||| |||||||
Sbjct: 25661810 catacttcagcgccgcagcgcttggtactcgaacctcgg 25661772



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                     
Query: 19      aatagccccgtaacttcgggnagnaaggggtgccccct 56
               |||||||||||||||||||| || ||||||||||||||
Sbjct: 9269940 aatagccccgtaacttcggg-ag-aaggggtgccccct 9269975



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                     
Query: 19      aatagccccgtaacttcgggnagnaaggggtgccccct 56
               |||||||||||||||||||| || ||||||||||||||
Sbjct: 9229440 aatagccccgtaacttcggg-ag-aaggggtgccccct 9229475



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                     
Query: 19      aatagccccgtaacttcgggnagnaaggggtgccccct 56
               |||||||||||||||||||| || ||||||||||||||
Sbjct: 9166028 aatagccccgtaacttcggg-ag-aaggggtgccccct 9166063



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                     
Query: 19      aatagccccgtaacttcgggnagnaaggggtgccccct 56
               |||||||||||||||||||| || ||||||||||||||
Sbjct: 9057854 aatagccccgtaacttcggg-ag-aaggggtgccccct 9057889

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                            
Query: 52       cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 19939892 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 19939833

                                                                            
Query: 112      gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 19939832 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 19939773

                                                                            
Query: 172      gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 19939772 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 19939713

                                         
Query: 232      gcagcgcttggtactcggacctcgg 256
                |||||||||||||||||||||||||
Sbjct: 19939712 gcagcgcttggtactcggacctcgg 19939688



 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                            
Query: 52       cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10388759 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 10388700

                                                                            
Query: 112      gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10388699 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 10388640

                                                                            
Query: 172      gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 10388639 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 10388580

                                         
Query: 232      gcagcgcttggtactcggacctcgg 256
                |||||||||||||||||||||||||
Sbjct: 10388579 gcagcgcttggtactcggacctcgg 10388555



 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Plus

                                                                            
Query: 52       cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10275539 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 10275598

                                                                            
Query: 112      gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10275599 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 10275658

                                                                            
Query: 172      gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 10275659 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 10275718

                                         
Query: 232      gcagcgcttggtactcggacctcgg 256
                |||||||||||||||||||||||||
Sbjct: 10275719 gcagcgcttggtactcggacctcgg 10275743



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                      
Query: 19       aatagccccgtaacttcgggnagnaaggggtgccccct 56
                |||||||||||||||||||| || ||||||||||||||
Sbjct: 19939925 aatagccccgtaacttcggg-ag-aaggggtgccccct 19939960



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                      
Query: 19       aatagccccgtaacttcgggnagnaaggggtgccccct 56
                |||||||||||||||||||| || ||||||||||||||
Sbjct: 10388792 aatagccccgtaacttcggg-ag-aaggggtgccccct 10388827



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                      
Query: 19       aatagccccgtaacttcgggnagnaaggggtgccccct 56
                |||||||||||||||||||| || ||||||||||||||
Sbjct: 10275506 aatagccccgtaacttcggg-ag-aaggggtgccccct 10275471

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Plus

                                                                           
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
               ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9240374 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 9240433

                                                                           
Query: 112     gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9240434 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 9240493

                                                                           
Query: 172     gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
               ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9240494 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 9240553

                                        
Query: 232     gcagcgcttggtactcggacctcgg 256
               |||||||||||||||||||||||||
Sbjct: 9240554 gcagcgcttggtactcggacctcgg 9240578



 Score =  155 bits (78), Expect = 8e-35
 Identities = 156/182 (85%), Gaps = 5/182 (2%)
 Strand = Plus / Plus

                                                                           
Query: 72      acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 131
               ||||||||||||| ||||| |||||| |||| ||||||||||||||| || |||||||||
Sbjct: 3579634 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 3579693

                                                                           
Query: 132     ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 191
               |||  |||||||||| |     ||||||||||| | || ||  ||||| |||||||||||
Sbjct: 3579694 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 3579748

                                                                           
Query: 192     agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 251
                 ||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||
Sbjct: 3579749 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 3579808

                 
Query: 252     ct 253
               ||
Sbjct: 3579809 ct 3579810



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                     
Query: 19      aatagccccgtaacttcgggnagnaaggggtgccccct 56
               |||||||||||||||||||| || ||||||||||||||
Sbjct: 9240341 aatagccccgtaacttcggg-ag-aaggggtgccccct 9240306

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                            
Query: 52       cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 31600074 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 31600015

                                                                            
Query: 112      gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 31600014 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 31599955

                                                                            
Query: 172      gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 31599954 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 31599895

                                         
Query: 232      gcagcgcttggtactcggacctcgg 256
                |||||||||||||||||||||||||
Sbjct: 31599894 gcagcgcttggtactcggacctcgg 31599870



 Score =  375 bits (189), Expect = e-101
 Identities = 201/205 (98%)
 Strand = Plus / Plus

                                                                            
Query: 52       cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 27411315 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 27411374

                                                                            
Query: 112      gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 27411375 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 27411434

                                                                            
Query: 172      gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 27411435 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 27411494

                                         
Query: 232      gcagcgcttggtactcggacctcgg 256
                |||| ||||||||||||||||||||
Sbjct: 27411495 gcagtgcttggtactcggacctcgg 27411519



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                      
Query: 19       aatagccccgtaacttcgggnagnaaggggtgccccct 56
                |||||||||||||||||||| || ||||||||||||||
Sbjct: 31600107 aatagccccgtaacttcggg-ag-aaggggtgccccct 31600142

---

>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Plus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 46151 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 46210

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 46211 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 46270

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 46271 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 46330

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 46331 gcagcgcttggtactcggacctcgg 46355



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 46118 aatagccccgtaacttcggg-ag-aaggggtgccccct 46083

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Plus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 51587 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 51646

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 51647 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 51706

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 51707 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 51766

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 51767 gcagcgcttggtactcggacctcgg 51791



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 51554 aatagccccgtaacttcggg-ag-aaggggtgccccct 51519

---

>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full
           insert sequence
          Length = 1809

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                       
Query: 52  cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 413 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 354

                                                                       
Query: 112 gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 353 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 294

                                                                       
Query: 172 gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 293 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 234

                                    
Query: 232 gcagcgcttggtactcggacctcgg 256
           |||||||||||||||||||||||||
Sbjct: 233 gcagcgcttggtactcggacctcgg 209



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                 
Query: 19  aatagccccgtaacttcgggnagnaaggggtgccccct 56
           |||||||||||||||||||| || ||||||||||||||
Sbjct: 446 aatagccccgtaacttcggg-ag-aaggggtgccccct 481

---

>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full
           insert sequence
          Length = 1345

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                       
Query: 52  cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 633 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 574

                                                                       
Query: 112 gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 573 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 514

                                                                       
Query: 172 gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 513 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 454

                                    
Query: 232 gcagcgcttggtactcggacctcgg 256
           |||||||||||||||||||||||||
Sbjct: 453 gcagcgcttggtactcggacctcgg 429



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                 
Query: 19  aatagccccgtaacttcgggnagnaaggggtgccccct 56
           |||||||||||||||||||| || ||||||||||||||
Sbjct: 666 aatagccccgtaacttcggg-ag-aaggggtgccccct 701

---

>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full
           insert sequence
          Length = 2146

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                       
Query: 52  cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 829 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 770

                                                                       
Query: 112 gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 769 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 710

                                                                       
Query: 172 gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 709 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 650

                                    
Query: 232 gcagcgcttggtactcggacctcgg 256
           |||||||||||||||||||||||||
Sbjct: 649 gcagcgcttggtactcggacctcgg 625



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                 
Query: 19  aatagccccgtaacttcgggnagnaaggggtgccccct 56
           |||||||||||||||||||| || ||||||||||||||
Sbjct: 862 aatagccccgtaacttcggg-ag-aaggggtgccccct 897

---

>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full
            insert sequence
          Length = 2390

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1554 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 1495

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1494 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 1435

                                                                        
Query: 172  gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1434 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 1375

                                     
Query: 232  gcagcgcttggtactcggacctcgg 256
            |||||||||||||||||||||||||
Sbjct: 1374 gcagcgcttggtactcggacctcgg 1350



 Score = 48.1 bits (24), Expect = 0.014
 Identities = 38/40 (95%), Gaps = 2/40 (5%)
 Strand = Plus / Plus

                                                    
Query: 19   aatagccccgtaacttcgggnagnaaggggtgccccctag 58
            |||||||||||||||||||| || ||||||||||||||||
Sbjct: 1587 aatagccccgtaacttcggg-ag-aaggggtgccccctag 1624

---

>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full
           insert sequence
          Length = 2509

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                       
Query: 52  cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 698 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 639

                                                                       
Query: 112 gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 638 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 579

                                                                       
Query: 172 gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 578 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 519

                                    
Query: 232 gcagcgcttggtactcggacctcgg 256
           |||||||||||||||||||||||||
Sbjct: 518 gcagcgcttggtactcggacctcgg 494



 Score = 46.1 bits (23), Expect = 0.054
 Identities = 37/39 (94%), Gaps = 2/39 (5%)
 Strand = Plus / Plus

                                                  
Query: 19  aatagccccgtaacttcgggnagnaaggggtgcccccta 57
           |||||||||||||||||||| || |||||||||||||||
Sbjct: 731 aatagccccgtaacttcggg-ag-aaggggtgcccccta 767

---

>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full
            insert sequence
          Length = 2589

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1425 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 1366

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1365 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 1306

                                                                        
Query: 172  gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1305 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 1246

                                     
Query: 232  gcagcgcttggtactcggacctcgg 256
            |||||||||||||||||||||||||
Sbjct: 1245 gcagcgcttggtactcggacctcgg 1221



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1458 aatagccccgtaacttcggg 1477

---

>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full
            insert sequence
          Length = 1896

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1554 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 1495

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1494 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 1435

                                                                        
Query: 172  gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1434 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 1375

                                     
Query: 232  gcagcgcttggtactcggacctcgg 256
            |||||||||||||||||||||||||
Sbjct: 1374 gcagcgcttggtactcggacctcgg 1350



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                  
Query: 19   aatagccccgtaacttcgggnagnaaggggtgccccct 56
            |||||||||||||||||||| || ||||||||||||||
Sbjct: 1587 aatagccccgtaacttcggg-ag-aaggggtgccccct 1622

---

>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full
           insert sequence
          Length = 1383

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                       
Query: 52  cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 642 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 583

                                                                       
Query: 112 gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 582 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 523

                                                                       
Query: 172 gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 522 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 463

                                    
Query: 232 gcagcgcttggtactcggacctcgg 256
           |||||||||||||||||||||||||
Sbjct: 462 gcagcgcttggtactcggacctcgg 438



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                 
Query: 19  aatagccccgtaacttcgggnagnaaggggtgccccct 56
           |||||||||||||||||||| || ||||||||||||||
Sbjct: 675 aatagccccgtaacttcggg-ag-aaggggtgccccct 710

---

>dbj|AK058625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C02, full
           insert sequence
          Length = 425

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                       
Query: 52  cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 219 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 160

                                                                       
Query: 112 gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 159 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 100

                                                                       
Query: 172 gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 99  gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 40

                                    
Query: 232 gcagcgcttggtactcggacctcgg 256
           |||||||||||||||||||||||||
Sbjct: 39  gcagcgcttggtactcggacctcgg 15



 Score = 46.1 bits (23), Expect = 0.054
 Identities = 37/39 (94%), Gaps = 2/39 (5%)
 Strand = Plus / Plus

                                                  
Query: 19  aatagccccgtaacttcgggnagnaaggggtgcccccta 57
           |||||||||||||||||||| || |||||||||||||||
Sbjct: 252 aatagccccgtaacttcggg-ag-aaggggtgcccccta 288

---

>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full
            insert sequence
          Length = 1310

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1177 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 1118

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1117 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 1058

                                                                        
Query: 172  gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1057 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 998

                                     
Query: 232  gcagcgcttggtactcggacctcgg 256
            |||||||||||||||||||||||||
Sbjct: 997  gcagcgcttggtactcggacctcgg 973



 Score = 46.1 bits (23), Expect = 0.054
 Identities = 37/39 (94%), Gaps = 2/39 (5%)
 Strand = Plus / Plus

                                                   
Query: 19   aatagccccgtaacttcgggnagnaaggggtgcccccta 57
            |||||||||||||||||||| || |||||||||||||||
Sbjct: 1210 aatagccccgtaacttcggg-ag-aaggggtgcccccta 1246

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                            
Query: 52       cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 19951168 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 19951109

                                                                            
Query: 112      gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 19951108 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 19951049

                                                                            
Query: 172      gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 19951048 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 19950989

                                         
Query: 232      gcagcgcttggtactcggacctcgg 256
                |||||||||||||||||||||||||
Sbjct: 19950988 gcagcgcttggtactcggacctcgg 19950964



 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                            
Query: 52       cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10394798 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 10394739

                                                                            
Query: 112      gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10394738 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 10394679

                                                                            
Query: 172      gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 10394678 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 10394619

                                         
Query: 232      gcagcgcttggtactcggacctcgg 256
                |||||||||||||||||||||||||
Sbjct: 10394618 gcagcgcttggtactcggacctcgg 10394594



 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Plus

                                                                            
Query: 52       cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10281578 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 10281637

                                                                            
Query: 112      gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10281638 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 10281697

                                                                            
Query: 172      gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 10281698 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 10281757

                                         
Query: 232      gcagcgcttggtactcggacctcgg 256
                |||||||||||||||||||||||||
Sbjct: 10281758 gcagcgcttggtactcggacctcgg 10281782



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                      
Query: 19       aatagccccgtaacttcgggnagnaaggggtgccccct 56
                |||||||||||||||||||| || ||||||||||||||
Sbjct: 19951201 aatagccccgtaacttcggg-ag-aaggggtgccccct 19951236



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                      
Query: 19       aatagccccgtaacttcgggnagnaaggggtgccccct 56
                |||||||||||||||||||| || ||||||||||||||
Sbjct: 10394831 aatagccccgtaacttcggg-ag-aaggggtgccccct 10394866



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                      
Query: 19       aatagccccgtaacttcgggnagnaaggggtgccccct 56
                |||||||||||||||||||| || ||||||||||||||
Sbjct: 10281545 aatagccccgtaacttcggg-ag-aaggggtgccccct 10281510

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 118119 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 118178

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118179 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 118238

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 118239 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 118298

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 118299 gcagcgcttggtactcggacctcgg 118323



 Score =  383 bits (193), Expect = e-103
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 96920 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 96861

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96860 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 96801

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 96800 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 96741

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 96740 gcagcgcttggtactcggacctcgg 96716



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 118086 aatagccccgtaacttcggg-ag-aaggggtgccccct 118051



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 96953 aatagccccgtaacttcggg-ag-aaggggtgccccct 96988

---

>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
             sequence
          Length = 138345

 Score =  375 bits (189), Expect = e-101
 Identities = 201/205 (98%)
 Strand = Plus / Plus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 20199 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 20258

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 20259 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagc 20318

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 20319 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 20378

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||| ||||||||||||||||||||
Sbjct: 20379 gcagtgcttggtactcggacctcgg 20403

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  367 bits (185), Expect = 1e-98
 Identities = 201/205 (98%), Gaps = 1/205 (0%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 118146 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 118205

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 118206 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttca-cgccgtagc 118264

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 118265 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 118324

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 118325 gcagcgcttggtactcggacctcgg 118349



 Score =  367 bits (185), Expect = 1e-98
 Identities = 201/205 (98%), Gaps = 1/205 (0%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 96972 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 96913

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 96912 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttca-cgccgtagc 96854

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 96853 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgct 96794

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 96793 gcagcgcttggtactcggacctcgg 96769



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 118113 aatagccccgtaacttcggg-ag-aaggggtgccccct 118078



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 97005 aatagccccgtaacttcggg-ag-aaggggtgccccct 97040

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  367 bits (185), Expect = 1e-98
 Identities = 200/205 (97%)
 Strand = Plus / Plus

                                                                           
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
               ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5634058 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 5634117

                                                                           
Query: 112     gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 5634118 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcaccgtagc 5634177

                                                                           
Query: 172     gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
               |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5634178 gcctggtatgagcctcgtcgagaagcaatggctagtccacggggctcatacttcagcgct 5634237

                                        
Query: 232     gcagcgcttggtactcggacctcgg 256
               |||||||||||||||||||||||||
Sbjct: 5634238 gcagcgcttggtactcggacctcgg 5634262



 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 46/47 (97%)
 Strand = Plus / Plus

                                                               
Query: 210      acggggctcatacttcagcgctgcagcgcttggtactcggacctcgg 256
                |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 13417087 acggggctcatacttcagcgctgcagtgcttggtactcggacctcgg 13417133



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 19      aatagccccgtaacttcggg 38
               ||||||||||||||||||||
Sbjct: 5634025 aatagccccgtaacttcggg 5634006

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  367 bits (185), Expect = 1e-98
 Identities = 200/205 (97%)
 Strand = Plus / Plus

                                                                           
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
               ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5634047 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 5634106

                                                                           
Query: 112     gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 5634107 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcaccgtagc 5634166

                                                                           
Query: 172     gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
               |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5634167 gcctggtatgagcctcgtcgagaagcaatggctagtccacggggctcatacttcagcgct 5634226

                                        
Query: 232     gcagcgcttggtactcggacctcgg 256
               |||||||||||||||||||||||||
Sbjct: 5634227 gcagcgcttggtactcggacctcgg 5634251



 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 46/47 (97%)
 Strand = Plus / Plus

                                                               
Query: 210      acggggctcatacttcagcgctgcagcgcttggtactcggacctcgg 256
                |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 13371361 acggggctcatacttcagcgctgcagtgcttggtactcggacctcgg 13371407



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 19      aatagccccgtaacttcggg 38
               ||||||||||||||||||||
Sbjct: 5634014 aatagccccgtaacttcggg 5633995

---

>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 139684

 Score =  367 bits (185), Expect = 1e-98
 Identities = 200/205 (97%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 18827 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 18768

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 18767 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcaccgtagc 18708

                                                                         
Query: 172   gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
             |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 18707 gcctggtatgagcctcgtcgagaagcaatggctagtccacggggctcatacttcagcgct 18648

                                      
Query: 232   gcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||
Sbjct: 18647 gcagcgcttggtactcggacctcgg 18623



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aatagccccgtaacttcggg 38
             ||||||||||||||||||||
Sbjct: 18860 aatagccccgtaacttcggg 18879

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  359 bits (181), Expect = 3e-96
 Identities = 200/205 (97%), Gaps = 1/205 (0%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121918 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 121977

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 121978 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttc-gcgccgtagc 122036

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||
Sbjct: 122037 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactttcgcgct 122096

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 122097 gcagcgcttggtactcggacctcgg 122121



 Score =  359 bits (181), Expect = 3e-96
 Identities = 200/205 (97%), Gaps = 1/205 (0%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100819 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 100760

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 100759 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttc-gcgccgtagc 100701

                                                                          
Query: 172    gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
              ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||
Sbjct: 100700 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactttcgcgct 100641

                                       
Query: 232    gcagcgcttggtactcggacctcgg 256
              |||||||||||||||||||||||||
Sbjct: 100640 gcagcgcttggtactcggacctcgg 100616



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 121885 aatagccccgtaacttcggg-ag-aaggggtgccccct 121850



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 100852 aatagccccgtaacttcggg-ag-aaggggtgccccct 100887

---

>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon
          Length = 8862

 Score =  359 bits (181), Expect = 3e-96
 Identities = 200/205 (97%), Gaps = 1/205 (0%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7172 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 7113

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 7112 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttc-gcgccgtagc 7054

                                                                        
Query: 172  gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
            ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||
Sbjct: 7053 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactttcgcgct 6994

                                     
Query: 232  gcagcgcttggtactcggacctcgg 256
            |||||||||||||||||||||||||
Sbjct: 6993 gcagcgcttggtactcggacctcgg 6969



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                  
Query: 19   aatagccccgtaacttcgggnagnaaggggtgccccct 56
            |||||||||||||||||||| || ||||||||||||||
Sbjct: 7205 aatagccccgtaacttcggg-ag-aaggggtgccccct 7240

---

>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA
          Length = 3079

 Score =  359 bits (181), Expect = 3e-96
 Identities = 200/205 (97%), Gaps = 1/205 (0%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1760 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 1701

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 1700 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttc-gcgccgtagc 1642

                                                                        
Query: 172  gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgct 231
            ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||
Sbjct: 1641 gcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactttcgcgct 1582

                                     
Query: 232  gcagcgcttggtactcggacctcgg 256
            |||||||||||||||||||||||||
Sbjct: 1581 gcagcgcttggtactcggacctcgg 1557



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                  
Query: 19   aatagccccgtaacttcgggnagnaaggggtgccccct 56
            |||||||||||||||||||| || ||||||||||||||
Sbjct: 1793 aatagccccgtaacttcggg-ag-aaggggtgccccct 1828

---

>ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0075K12.8), mRNA
          Length = 858

 Score =  293 bits (148), Expect = 1e-76
 Identities = 157/160 (98%)
 Strand = Plus / Plus

                                                                       
Query: 97  aggtacccttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacata 156
           |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 630 aggtacccctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacata 689

                                                                       
Query: 157 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggc 216
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 690 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggc 749

                                                   
Query: 217 tcatacttcagcgctgcagcgcttggtactcggacctcgg 256
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tcatacttcagcgctgcagcgcttggtactcggacctcgg 789

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score =  264 bits (133), Expect = 1e-67
 Identities = 142/145 (97%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 814542 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 814483

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 814482 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagt 814423

                                       
Query: 172    gcctggtatgagcctcgtggagaag 196
              |||||||||||||||||||||||||
Sbjct: 814422 gcctggtatgagcctcgtggagaag 814398



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 814575 aatagccccgtaacttcggg-ag-aaggggtgccccct 814610



 Score = 42.1 bits (21), Expect = 0.84
 Identities = 40/46 (86%), Gaps = 4/46 (8%)
 Strand = Plus / Minus

                                                              
Query: 185      ctcgtggagaagcaattgctagt----ccacggggctcatacttca 226
                |||||||||||||||| ||||||    | |||||||||||||||||
Sbjct: 30471823 ctcgtggagaagcaatggctagtctagctacggggctcatacttca 30471778

---

>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1442_E05
          Length = 162407

 Score =  264 bits (133), Expect = 1e-67
 Identities = 142/145 (97%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23750 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 23691

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 23690 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagt 23631

                                      
Query: 172   gcctggtatgagcctcgtggagaag 196
             |||||||||||||||||||||||||
Sbjct: 23630 gcctggtatgagcctcgtggagaag 23606



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 23783 aatagccccgtaacttcggg-ag-aaggggtgccccct 23818

---

>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0036E06
          Length = 137926

 Score =  264 bits (133), Expect = 1e-67
 Identities = 142/145 (97%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 92673 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgtt 92614

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 92613 gaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagt 92554

                                      
Query: 172   gcctggtatgagcctcgtggagaag 196
             |||||||||||||||||||||||||
Sbjct: 92553 gcctggtatgagcctcgtggagaag 92529



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                   
Query: 19    aatagccccgtaacttcgggnagnaaggggtgccccct 56
             |||||||||||||||||||| || ||||||||||||||
Sbjct: 92706 aatagccccgtaacttcggg-ag-aaggggtgccccct 92741

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  220 bits (111), Expect = 2e-54
 Identities = 124/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131093 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 131152

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||||||||||||    |||||||||||||||||
Sbjct: 131153 gaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagc 131208

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 131209 gcctggta 131216



 Score =  220 bits (111), Expect = 2e-54
 Identities = 124/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105785 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 105726

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||||||||||||    |||||||||||||||||
Sbjct: 105725 gaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagc 105670

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 105669 gcctggta 105662



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 131060 aatagccccgtaacttcggg 131041



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 105818 aatagccccgtaacttcggg 105837

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  220 bits (111), Expect = 2e-54
 Identities = 124/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131086 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 131145

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||||||||||||    |||||||||||||||||
Sbjct: 131146 gaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagc 131201

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 131202 gcctggta 131209



 Score =  220 bits (111), Expect = 2e-54
 Identities = 124/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105783 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 105724

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||||||||||||    |||||||||||||||||
Sbjct: 105723 gaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagc 105668

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 105667 gcctggta 105660



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 131053 aatagccccgtaacttcggg 131034



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 105816 aatagccccgtaacttcggg 105835

---

>gb|DQ481232.1| Populus suaveolens unknown gene
          Length = 854

 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                       
Query: 52  cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 574

                                                                       
Query: 112 gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
           ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 573 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 518

                   
Query: 172 gcctggta 179
           ||||||||
Sbjct: 517 gcctggta 510



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 19  aatagccccgtaacttcggg 38
           ||||||||||||||||||||
Sbjct: 666 aatagccccgtaacttcggg 685

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134219 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 134278

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 134279 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 134334

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 134335 gcctggta 134342



 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107687 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 107628

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 107627 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 107572

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 107571 gcctggta 107564



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 134186 aatagccccgtaacttcggg 134167



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 107720 aatagccccgtaacttcggg 107739

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138676 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 138735

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 138736 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 138791

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 138792 gcctggta 138799



 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111384 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111325

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 111324 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 111269

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 111268 gcctggta 111261



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 138643 aatagccccgtaacttcggg 138624



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 111417 aatagccccgtaacttcggg 111436

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137897 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 137956

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 137957 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 138012

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 138013 gcctggta 138020



 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112048 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111989

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 111988 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 111933

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 111932 gcctggta 111925



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 220    tacttcagcgctgcagcgcttggtactcggac 251
              ||||||||||| | ||||| ||||||||||||
Sbjct: 137996 tacttcagcgccgtagcgcctggtactcggac 138027



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 137864 aatagccccgtaacttcggg 137845



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 112081 aatagccccgtaacttcggg 112100



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 220    tacttcagcgctgcagcgcttggtactcggac 251
              ||||||||||| | ||||| ||||||||||||
Sbjct: 111949 tacttcagcgccgtagcgcctggtactcggac 111918

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133305 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 133364

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 133365 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 133420

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 133421 gcctggta 133428



 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106977 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 106918

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 106917 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 106862

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 106861 gcctggta 106854



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 220    tacttcagcgctgcagcgcttggtactcggac 251
              ||||||||||| | ||||| ||||||||||||
Sbjct: 133404 tacttcagcgccgtagcgcctggtactcggac 133435



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 133272 aatagccccgtaacttcggg 133253



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 107010 aatagccccgtaacttcggg 107029



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 220    tacttcagcgctgcagcgcttggtactcggac 251
              ||||||||||| | ||||| ||||||||||||
Sbjct: 106878 tacttcagcgccgtagcgcctggtactcggac 106847

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 130110 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgtt 130169

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||||||||||||    |||||||||||||||||
Sbjct: 130170 gaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagc 130225

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 130226 gcctggta 130233



 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 103335 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgtt 103276

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||||||||||||    |||||||||||||||||
Sbjct: 103275 gaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagc 103220

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 103219 gcctggta 103212



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 130077 aatagccccgtaacttcggg-ag-aaggggtgccccct 130042



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                    
Query: 19     aatagccccgtaacttcgggnagnaaggggtgccccct 56
              |||||||||||||||||||| || ||||||||||||||
Sbjct: 103368 aatagccccgtaacttcggg-ag-aaggggtgccccct 103403

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134498 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 134557

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 134558 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 134613

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 134614 gcctggta 134621



 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107909 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 107850

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 107849 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 107794

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 107793 gcctggta 107786



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 134465 aatagccccgtaacttcggg 134446



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 107942 aatagccccgtaacttcggg 107961

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138027 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 138086

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 138087 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 138142

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 138143 gcctggta 138150



 Score =  212 bits (107), Expect = 4e-52
 Identities = 123/128 (96%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111272 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111213

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 111212 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 111157

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 111156 gcctggta 111149



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 137994 aatagccccgtaacttcggg 137975



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 111305 aatagccccgtaacttcggg 111324

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137822 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 137881

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||| |||| |||    |||||||||||||||||
Sbjct: 137882 gaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagc 137937

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 137938 gcctggta 137945



 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111275 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111216

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||| |||| |||    |||||||||||||||||
Sbjct: 111215 gaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagc 111160

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 111159 gcctggta 111152



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 137789 aatagccccgtaacttcggg 137770



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 111308 aatagccccgtaacttcggg 111327

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129985 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 130044

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||| ||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 130045 gaaggccgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 130100

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 130101 gcctggta 130108



 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104650 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 104591

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||| ||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 104590 gaaggccgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 104535

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 104534 gcctggta 104527



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 129952 aatagccccgtaacttcggg 129933



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 104683 aatagccccgtaacttcggg 104702

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 140420 cccctaggtattctctacctacccacctgtgttggtttcgggtacaggtacccttttgtt 140479

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 140480 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 140535

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 140536 gcctggta 140543



 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 113237 cccctaggtattctctacctacccacctgtgttggtttcgggtacaggtacccttttgtt 113178

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 113177 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 113122

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 113121 gcctggta 113114



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 220    tacttcagcgctgcagcgcttggtactcggac 251
              ||||||||||| | ||||| ||||||||||||
Sbjct: 140519 tacttcagcgccgtagcgcctggtactcggac 140550



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 140387 aatagccccgtaacttcggg 140368



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 113270 aatagccccgtaacttcggg 113289



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 220    tacttcagcgctgcagcgcttggtactcggac 251
              ||||||||||| | ||||| ||||||||||||
Sbjct: 113138 tacttcagcgccgtagcgcctggtactcggac 113107

---

>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence
          Length = 1750

 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 1622

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            |||||||||||||||||||||||||||||| |||| |||    |||||||||||||||||
Sbjct: 1621 gaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagc 1566

                    
Query: 172  gcctggta 179
            ||||||||
Sbjct: 1565 gcctggta 1558



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1714 aatagccccgtaacttcggg 1733

---

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131316 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 131375

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||| |||| |||    |||||||||||||||||
Sbjct: 131376 gaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagc 131431

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 131432 gcctggta 131439



 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105448 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 105389

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||| |||| |||    |||||||||||||||||
Sbjct: 105388 gaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagc 105333

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 105332 gcctggta 105325



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 131283 aatagccccgtaacttcggg 131264



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 105481 aatagccccgtaacttcggg 105500

---

>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2867

 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1700 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 1641

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            ||||||||||||||||||||||||||||||||||| |||    ||||||||||||||| |
Sbjct: 1640 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtatc 1585

                    
Query: 172  gcctggta 179
            ||||||||
Sbjct: 1584 gcctggta 1577



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                  
Query: 19   aatagccccgtaacttcgggnagnaaggggtgccccct 56
            |||||||||||||||||||| || ||||||||||||||
Sbjct: 1733 aatagccccgtaacttcggg-ag-aaggggtgccccct 1768

---

>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast
            gene for chloroplast product
          Length = 3322

 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2177 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgtt 2118

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 2117 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 2062

                    
Query: 172  gcctggta 179
            ||||||||
Sbjct: 2061 gcctggta 2054



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                  
Query: 19   aatagccccgtaacttcgggnagnaaggggtgccccct 56
            |||||||||||||||||||| || ||||||||||||||
Sbjct: 2210 aatagccccgtaacttcggg-ag-aaggggtgccccct 2245

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132541 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 132600

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               |||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 132601 aaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 132656

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 132657 gcctggta 132664



 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105430 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 105371

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               |||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 105370 aaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 105315

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 105314 gcctggta 105307



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 220    tacttcagcgctgcagcgcttggtactcggac 251
              ||||||||||| | ||||| ||||||||||||
Sbjct: 132640 tacttcagcgccgtagcgcctggtactcggac 132671



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 132508 aatagccccgtaacttcggg 132489



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 105463 aatagccccgtaacttcggg 105482



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 220    tacttcagcgctgcagcgcttggtactcggac 251
              ||||||||||| | ||||| ||||||||||||
Sbjct: 105331 tacttcagcgccgtagcgcctggtactcggac 105300

---

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
              strain:Columbia
          Length = 154478

 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132277 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 132336

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||| |||| |||    |||||||||||||||||
Sbjct: 132337 gaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagc 132392

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 132393 gcctggta 132400



 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106372 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 106313

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||||||||||||| |||| |||    |||||||||||||||||
Sbjct: 106312 gaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagc 106257

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 106256 gcctggta 106249



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 132244 aatagccccgtaacttcggg 132225



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 106405 aatagccccgtaacttcggg 106424

---

>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene
          Length = 2811

 Score =  204 bits (103), Expect = 1e-49
 Identities = 122/128 (95%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1683 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgtt 1624

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 1623 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 1568

                    
Query: 172  gcctggta 179
            ||||||||
Sbjct: 1567 gcctggta 1560



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1716 aatagccccgtaacttcggg 1735

---

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence
          Length = 163935

 Score =  196 bits (99), Expect = 2e-47
 Identities = 121/128 (94%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 141197 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgtt 141256

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 141257 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 141312

                      
Query: 172    gcctggta 179
              || |||||
Sbjct: 141313 gcttggta 141320



 Score =  196 bits (99), Expect = 2e-47
 Identities = 121/128 (94%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 112131 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgtt 112072

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 112071 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 112016

                      
Query: 172    gcctggta 179
              || |||||
Sbjct: 112015 gcttggta 112008



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                   
Query: 220    tacttcagcgctgcagcgcttggtactcggacctcgg 256
              ||||||||||| | |||||||||||||||||||||||
Sbjct: 141296 tacttcagcgccgtagcgcttggtactcggacctcgg 141332



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                   
Query: 220    tacttcagcgctgcagcgcttggtactcggacctcgg 256
              ||||||||||| | |||||||||||||||||||||||
Sbjct: 112032 tacttcagcgccgtagcgcttggtactcggacctcgg 111996



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 141164 aatagccccgtaacttcggg 141145



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 112164 aatagccccgtaacttcggg 112183

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  196 bits (99), Expect = 2e-47
 Identities = 121/128 (94%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 134910 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgtt 134969

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||| | |||    |||||||||||||||||
Sbjct: 134970 gaaggtcgttcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagc 135025

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 135026 gcctggta 135033



 Score =  196 bits (99), Expect = 2e-47
 Identities = 121/128 (94%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 107515 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgtt 107456

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||||||||||||| | |||    |||||||||||||||||
Sbjct: 107455 gaaggtcgttcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagc 107400

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 107399 gcctggta 107392



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 134877 aatagccccgtaacttcggg 134858



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 107548 aatagccccgtaacttcggg 107567

---

>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0073M15, complete sequence
          Length = 143071

 Score =  194 bits (98), Expect = 9e-47
 Identities = 104/106 (98%)
 Strand = Plus / Minus

                                                                         
Query: 106   tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 165
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 24880 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 24821

                                                           
Query: 166   cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccac 211
             ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 24820 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccac 24775

---

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  192 bits (97), Expect = 4e-46
 Identities = 120/126 (95%), Gaps = 5/126 (3%)
 Strand = Plus / Plus

                                                                          
Query: 55     ctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc-ttttgttga 113
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 128850 ctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttttgttga 128909

                                                                          
Query: 114    aggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgc 173
              ||||||||||||||||||||||||||||||||| |||    |||||||||||||||||||
Sbjct: 128910 aggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgc 128965

                    
Query: 174    ctggta 179
              ||||||
Sbjct: 128966 ctggta 128971



 Score =  192 bits (97), Expect = 4e-46
 Identities = 120/126 (95%), Gaps = 5/126 (3%)
 Strand = Plus / Minus

                                                                          
Query: 55     ctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc-ttttgttga 113
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 103606 ctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttttgttga 103547

                                                                          
Query: 114    aggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgc 173
              ||||||||||||||||||||||||||||||||| |||    |||||||||||||||||||
Sbjct: 103546 aggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgc 103491

                    
Query: 174    ctggta 179
              ||||||
Sbjct: 103490 ctggta 103485



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 128814 aatagccccgtaacttcggg 128795



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 103642 aatagccccgtaacttcggg 103661

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  188 bits (95), Expect = 6e-45
 Identities = 120/128 (93%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 126185 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgtt 126244

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||| ||||||| ||| |||    |||||||||||||||||
Sbjct: 126245 gaaggtcgttcgagcttttcctgagagtatgacatgggt----tacttcagcgccgtagc 126300

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 126301 gcctggta 126308



 Score =  188 bits (95), Expect = 6e-45
 Identities = 120/128 (93%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 108737 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgtt 108678

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||||||| ||||||| ||| |||    |||||||||||||||||
Sbjct: 108677 gaaggtcgttcgagcttttcctgagagtatgacatgggt----tacttcagcgccgtagc 108622

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 108621 gcctggta 108614



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 220    tacttcagcgctgcagcgcttggtactcggac 251
              ||||||||||| | ||||| ||||||||||||
Sbjct: 126284 tacttcagcgccgtagcgcctggtactcggac 126315



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 126152 aatagccccgtaacttcggg 126133



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 108770 aatagccccgtaacttcggg 108789



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 220    tacttcagcgctgcagcgcttggtactcggac 251
              ||||||||||| | ||||| ||||||||||||
Sbjct: 108638 tacttcagcgccgtagcgcctggtactcggac 108607

---

>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA
            genes, complete sequence; chloroplast
          Length = 3069

 Score =  186 bits (94), Expect = 2e-44
 Identities = 119/127 (93%), Gaps = 4/127 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1697 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgtt 1638

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            |||||||||||||||||||||||||||||||||   |||    |||||||||||||||||
Sbjct: 1637 gaaggtcgttcgagcttttcctgggagtatggctagggt----tacttcagcgccgtagc 1582

                   
Query: 172  gcctggt 178
            |||||||
Sbjct: 1581 gcctggt 1575



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1730 aatagccccgtaacttcggg 1749

---

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  186 bits (94), Expect = 2e-44
 Identities = 100/102 (98%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 90027 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgtt 89968

                                                       
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttac 153
             ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 89967 gaaggtcgttcgagcttttcctgggagtatggcatgggttac 89926



 Score = 48.1 bits (24), Expect = 0.014
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 220   tacttcagcgctgcagcgcttggtactcggac 251
             ||||||||||||| ||||||| ||||||||||
Sbjct: 89928 tacttcagcgctgtagcgcttagtactcggac 89897



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aatagccccgtaacttcggg 38
             ||||||||||||||||||||
Sbjct: 90060 aatagccccgtaacttcggg 90079

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 134618 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 134677

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 134678 caaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 134733

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 134734 gcctggtat 134742



 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 108012 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 107953

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 107952 caaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 107897

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 107896 gcctggtat 107888



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 134585 aatagccccgtaacttcggg 134566



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 108045 aatagccccgtaacttcggg 108064

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 135256 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 135315

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 135316 caaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 135371

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 135372 gcctggtat 135380



 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 108301 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 108242

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 108241 caaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 108186

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 108185 gcctggtat 108177



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 135223 aatagccccgtaacttcggg 135204



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 108334 aatagccccgtaacttcggg 108353

---

>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA
            intergenic spacer region and 23S ribosomal RNA gene,
            partial sequences
          Length = 3735

 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 3206 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 3147

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 3146 caaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 3091

                     
Query: 172  gcctggtat 180
            |||||||||
Sbjct: 3090 gcctggtat 3082



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 3239 aatagccccgtaacttcggg 3258

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 133864 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 133923

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 133924 taacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 133979

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 133980 gcctggtat 133988



 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 107172 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 107113

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 107112 taacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 107057

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 107056 gcctggtat 107048



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 133831 aatagccccgtaacttcggg 133812



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 107205 aatagccccgtaacttcggg 107224

---

>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S
            ribosomal RNA genes, complete sequence; chloroplast genes
            for chloroplast products
          Length = 5157

 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 3451 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 3392

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 3391 caaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 3336

                     
Query: 172  gcctggtat 180
            |||||||||
Sbjct: 3335 gcctggtat 3327



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 3484 aatagccccgtaacttcggg 3503

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 133999 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 134058

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 134059 taacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 134114

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 134115 gcctggtat 134123



 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 107344 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 107285

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 107284 taacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 107229

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 107228 gcctggtat 107220



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 133966 aatagccccgtaacttcggg 133947



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 107377 aatagccccgtaacttcggg 107396

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 133997 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 134056

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 134057 taacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 134112

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 134113 gcctggtat 134121



 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 107341 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 107282

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 107281 taacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 107226

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 107225 gcctggtat 107217



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 133964 aatagccccgtaacttcggg 133945



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 107374 aatagccccgtaacttcggg 107393

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 133909 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 133968

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 133969 taacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 134024

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 134025 gcctggtat 134033



 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 107219 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 107160

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 107159 taacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 107104

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 107103 gcctggtat 107095



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 133876 aatagccccgtaacttcggg 133857



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 107252 aatagccccgtaacttcggg 107271

---

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  182 bits (92), Expect = 4e-43
 Identities = 117/125 (93%), Gaps = 4/125 (3%)
 Strand = Plus / Plus

                                                                          
Query: 55     ctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaa 114
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 130188 ctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccatttgttgaa 130247

                                                                          
Query: 115    ggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcc 174
              |||||||||||||||||||||||||||||||| | |    ||||||||||| ||||||||
Sbjct: 130248 ggtcgttcgagcttttcctgggagtatggcatggat----tacttcagcgctgtagcgcc 130303

                   
Query: 175    tggta 179
              |||||
Sbjct: 130304 tggta 130308



 Score =  182 bits (92), Expect = 4e-43
 Identities = 117/125 (93%), Gaps = 4/125 (3%)
 Strand = Plus / Minus

                                                                          
Query: 55     ctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaa 114
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 105206 ctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccatttgttgaa 105147

                                                                          
Query: 115    ggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcc 174
              |||||||||||||||||||||||||||||||| | |    ||||||||||| ||||||||
Sbjct: 105146 ggtcgttcgagcttttcctgggagtatggcatggat----tacttcagcgctgtagcgcc 105091

                   
Query: 175    tggta 179
              |||||
Sbjct: 105090 tggta 105086



 Score = 42.1 bits (21), Expect = 0.84
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 220    tacttcagcgctgcagcgcttggtactcg 248
              ||||||||||||| ||||| |||||||||
Sbjct: 130284 tacttcagcgctgtagcgcctggtactcg 130312



 Score = 42.1 bits (21), Expect = 0.84
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 220    tacttcagcgctgcagcgcttggtactcg 248
              ||||||||||||| ||||| |||||||||
Sbjct: 105110 tacttcagcgctgtagcgcctggtactcg 105082



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 130152 aatagccccgtaacttcggg 130133



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 105242 aatagccccgtaacttcggg 105261

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 134616 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 134675

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 134676 caaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 134731

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 134732 gcctggtat 134740



 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 108010 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 107951

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 107950 caaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 107895

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 107894 gcctggtat 107886



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 134583 aatagccccgtaacttcggg 134564



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 108043 aatagccccgtaacttcggg 108062

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 134347 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 134406

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 134407 caaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 134462

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 134463 gcctggtat 134471



 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 107791 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 107732

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 107731 caaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 107676

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 107675 gcctggtat 107667



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 134314 aatagccccgtaacttcggg 134295



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 107824 aatagccccgtaacttcggg 107843

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 133876 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 133935

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 133936 taacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 133991

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 133992 gcctggtat 134000



 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 107186 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 107127

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 107126 taacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 107071

                       
Query: 172    gcctggtat 180
              |||||||||
Sbjct: 107070 gcctggtat 107062



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 133843 aatagccccgtaacttcggg 133824



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 107219 aatagccccgtaacttcggg 107238

---

>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA
            gene, 23S rRNA gene (partial) and 5S rRNA gene
          Length = 6689

 Score =  182 bits (92), Expect = 4e-43
 Identities = 120/129 (93%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 1142 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 1083

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             || ||||||||||||||||||||||||||||||| |||    |||||||||||||||||
Sbjct: 1082 caaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagc 1027

                     
Query: 172  gcctggtat 180
            |||||||||
Sbjct: 1026 gcctggtat 1018



 Score =  155 bits (78), Expect = 8e-35
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                        
Query: 69   cctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagctt 128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1702 cctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagctt 1643

                              
Query: 129  ttcctgggagtatggcat 146
            ||||||||||||||||||
Sbjct: 1642 ttcctgggagtatggcat 1625



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1754 aatagccccgtaacttcggg 1773



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1175 aatagccccgtaacttcggg 1194

---

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  180 bits (91), Expect = 1e-42
 Identities = 119/128 (92%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 87939 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccatttgtt 87880

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||||||||||||||||||| |||    ||||||||||| |||||
Sbjct: 87879 gaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgctgtagc 87824

                     
Query: 172   gcctggta 179
             || |||||
Sbjct: 87823 gcttggta 87816



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 220   tacttcagcgctgcagcgcttggtactcggac 251
             ||||||||||||| ||||||||||||||||||
Sbjct: 87840 tacttcagcgctgtagcgcttggtactcggac 87809



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aatagccccgtaacttcggg 38
             ||||||||||||||||||||
Sbjct: 87972 aatagccccgtaacttcggg 87991

---

>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene
           for chloroplast product
          Length = 1041

 Score =  180 bits (91), Expect = 1e-42
 Identities = 94/95 (98%)
 Strand = Plus / Minus

                                                                       
Query: 52  cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 949 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccatttgtt 890

                                              
Query: 112 gaaggtcgttcgagcttttcctgggagtatggcat 146
           |||||||||||||||||||||||||||||||||||
Sbjct: 889 gaaggtcgttcgagcttttcctgggagtatggcat 855



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 982  aatagccccgtaacttcggg 1001

---

>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast
            gene for chloroplast product
          Length = 2873

 Score =  180 bits (91), Expect = 1e-42
 Identities = 101/103 (98%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc-ttttgt 110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1703 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttttgt 1644

                                                       
Query: 111  tgaaggtcgttcgagcttttcctgggagtatggcatcggttac 153
            |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1643 tgaaggtcgttcgagcttttcctgggagtatggcattggttac 1601



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                  
Query: 19   aatagccccgtaacttcgggnagnaaggggtgccccct 56
            |||||||||||||||||||| || ||||||||||||||
Sbjct: 1736 aatagccccgtaacttcggg-ag-aaggggtgccccct 1771

---

>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence
          Length = 116699

 Score =  174 bits (88), Expect = 9e-41
 Identities = 94/96 (97%)
 Strand = Plus / Plus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77297 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 77356

                                                 
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatc 147
              ||||||||||||||||||| |||||||||||||||
Sbjct: 77357 taaggtcgttcgagcttttcttgggagtatggcatc 77392



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    aatagccccgtaacttcggg 38
             ||||||||||||||||||||
Sbjct: 77264 aatagccccgtaacttcggg 77245

---

>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence
          Length = 110949

 Score =  174 bits (88), Expect = 9e-41
 Identities = 94/96 (97%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5903 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 5844

                                                
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatc 147
             ||||||||||||||||||| |||||||||||||||
Sbjct: 5843 taaggtcgttcgagcttttcttgggagtatggcatc 5808



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 5936 aatagccccgtaacttcggg 5955

---

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  174 bits (88), Expect = 9e-41
 Identities = 94/96 (97%)
 Strand = Plus / Plus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22022 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 22081

                                                 
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatc 147
              ||||||||||||||||||| |||||||||||||||
Sbjct: 22082 taaggtcgttcgagcttttcttgggagtatggcatc 22117



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    aatagccccgtaacttcggg 38
             ||||||||||||||||||||
Sbjct: 21989 aatagccccgtaacttcggg 21970

---

>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2894

 Score =  174 bits (88), Expect = 9e-41
 Identities = 95/96 (98%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1720 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 1661

                                                
Query: 112  gaaggtcgttcg-agcttttcctgggagtatggcat 146
            |||||||||||| |||||||||||||||||||||||
Sbjct: 1660 gaaggtcgttcgaagcttttcctgggagtatggcat 1625



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                  
Query: 19   aatagccccgtaacttcgggnagnaaggggtgccccct 56
            |||||||||||||||||||| || ||||||||||||||
Sbjct: 1753 aatagccccgtaacttcggg-ag-aaggggtgccccct 1788

---

>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2883

 Score =  172 bits (87), Expect = 3e-40
 Identities = 94/95 (98%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1714 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta-ccttttgtt 1656

                                               
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcat 146
            |||||||||||||||||||||||||||||||||||
Sbjct: 1655 gaaggtcgttcgagcttttcctgggagtatggcat 1621



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                  
Query: 19   aatagccccgtaacttcgggnagnaaggggtgccccct 56
            |||||||||||||||||||| || ||||||||||||||
Sbjct: 1747 aatagccccgtaacttcggg-ag-aaggggtgccccct 1782

---

>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2902

 Score =  165 bits (83), Expect = 8e-38
 Identities = 99/103 (96%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1732 cccctaggtattctctacctacccacctgtgtcggtttcgggtaaaggtaaccttttgtt 1673

                                                       
Query: 112  gaaggtcgttcg-agcttttcctgggagtatggcatcggttac 153
            |||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 1672 gaaggtcgttcgaagcttttcctgggagtatggcatgggttac 1630



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                  
Query: 19   aatagccccgtaacttcgggnagnaaggggtgccccct 56
            |||||||||||||||||||| || ||||||||||||||
Sbjct: 1765 aatagccccgtaacttcggg-ag-aaggggtgccccct 1800

---

>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3033

 Score =  165 bits (83), Expect = 8e-38
 Identities = 117/128 (91%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||
Sbjct: 1693 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgtt 1634

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            |||||||||||||||||||| ||||||| |||||| |||    ||||||||| |||||||
Sbjct: 1633 gaaggtcgttcgagcttttcttgggagtgtggcatgggt----tacttcagcaccgtagc 1578

                    
Query: 172  gcctggta 179
            ||||||||
Sbjct: 1577 gcctggta 1570



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1726 aatagccccgtaacttcggg 1745

---

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score =  165 bits (83), Expect = 8e-38
 Identities = 114/124 (91%), Gaps = 4/124 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 126754 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccacttgtt 126813

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||||||||||| |||||||||| ||| |||    |||||||||||| ||||
Sbjct: 126814 gaaggtcgttcgagcttttcttgggagtatgacatgggt----tacttcagcgccatagc 126869

                  
Query: 172    gcct 175
              ||||
Sbjct: 126870 gcct 126873



 Score =  165 bits (83), Expect = 8e-38
 Identities = 114/124 (91%), Gaps = 4/124 (3%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 96693 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccacttgtt 96634

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             |||||||||||||||||||| |||||||||| ||| |||    |||||||||||| ||||
Sbjct: 96633 gaaggtcgttcgagcttttcttgggagtatgacatgggt----tacttcagcgccatagc 96578

                 
Query: 172   gcct 175
             ||||
Sbjct: 96577 gcct 96574



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 126721 aatagccccgtaacttcggg 126702



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aatagccccgtaacttcggg 38
             ||||||||||||||||||||
Sbjct: 96726 aatagccccgtaacttcggg 96745

---

>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA
            (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and
            Ile) genes
          Length = 9493

 Score =  163 bits (82), Expect = 3e-37
 Identities = 88/90 (97%)
 Strand = Plus / Plus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4876 cccctaggtattttctacctacctacctgtgtcggtttcgggtacaggtacccttttgtt 4935

                                          
Query: 112  gaaggtcgttcgagcttttcctgggagtat 141
            ||||||||||||||||||||||||||||||
Sbjct: 4936 gaaggtcgttcgagcttttcctgggagtat 4965



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 4843 aatagccccgtaacttcggg 4824

---

>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes
          Length = 3166

 Score =  163 bits (82), Expect = 3e-37
 Identities = 97/102 (95%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 1777 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgct 1718

                                                      
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttac 153
             || ||||||||||||||||||||||||||||||| ||||||
Sbjct: 1717 caaagtcgttcgagcttttcctgggagtatggcatgggttac 1676



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1810 aatagccccgtaacttcggg 1829

---

>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon
          Length = 7920

 Score =  159 bits (80), Expect = 5e-36
 Identities = 92/96 (95%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 6189 cccctaggtattctctacctacccacctgtgtcggtttccggtacaggtaccctcttgtt 6130

                                                
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatc 147
            | ||||||||||| ||||||||||||||||||||||
Sbjct: 6129 gtaggtcgttcgaacttttcctgggagtatggcatc 6094



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 6222 aatagccccgtaacttcggg 6241

---

>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA
          Length = 7920

 Score =  159 bits (80), Expect = 5e-36
 Identities = 92/96 (95%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 6189 cccctaggtattctctacctacccacctgtgtcggtttccggtacaggtaccctcttgtt 6130

                                                
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatc 147
            | ||||||||||| ||||||||||||||||||||||
Sbjct: 6129 gtaggtcgttcgaacttttcctgggagtatggcatc 6094



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 6222 aatagccccgtaacttcggg 6241

---

>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes,
            complete sequence; and atp6 pseudogene, partial sequence;
            mitochondrial
          Length = 10403

 Score =  157 bits (79), Expect = 2e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||
Sbjct: 2133 cccctaggtattctctacctacctacctgtgttagtttcgggtacaggtacccttttgtt 2192

                                               
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcat 146
            |||||||||||||||||||||| ||||||||||||
Sbjct: 2193 gaaggtcgttcgagcttttcctaggagtatggcat 2227

---

>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0577B11
          Length = 180355

 Score =  155 bits (78), Expect = 8e-35
 Identities = 156/182 (85%), Gaps = 5/182 (2%)
 Strand = Plus / Plus

                                                                         
Query: 72    acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 131
             ||||||||||||| ||||| |||||| |||| ||||||||||||||| || |||||||||
Sbjct: 58140 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 58199

                                                                         
Query: 132   ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 191
             |||  |||||||||| |     ||||||||||| | || ||  ||||| |||||||||||
Sbjct: 58200 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 58254

                                                                         
Query: 192   agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 251
               ||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||
Sbjct: 58255 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 58314

               
Query: 252   ct 253
             ||
Sbjct: 58315 ct 58316

---

>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0672D01
          Length = 146954

 Score =  155 bits (78), Expect = 8e-35
 Identities = 156/182 (85%), Gaps = 5/182 (2%)
 Strand = Plus / Plus

                                                                          
Query: 72     acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 131
              ||||||||||||| ||||| |||||| |||| ||||||||||||||| || |||||||||
Sbjct: 135351 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 135410

                                                                          
Query: 132    ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 191
              |||  |||||||||| |     ||||||||||| | || ||  ||||| |||||||||||
Sbjct: 135411 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 135465

                                                                          
Query: 192    agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 251
                ||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||
Sbjct: 135466 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 135525

                
Query: 252    ct 253
              ||
Sbjct: 135526 ct 135527

---

>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon
          Length = 2900

 Score =  153 bits (77), Expect = 3e-34
 Identities = 115/128 (89%), Gaps = 11/128 (8%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1310 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 1251

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
            |||||||||||||||       ||||||||||||| |||    |||||||||||||||||
Sbjct: 1250 gaaggtcgttcgagc-------gggagtatggcatgggt----tacttcagcgccgtagc 1202

                    
Query: 172  gcctggta 179
             |||||||
Sbjct: 1201 acctggta 1194



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1343 aatagccccgtaacttcggg 1362

---

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score =  149 bits (75), Expect = 5e-33
 Identities = 112/124 (90%), Gaps = 4/124 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| 
Sbjct: 145602 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccacttgtc 145543

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               ||||||||||||||||||| ||||||| |||||| |||    |||||| ||||||||||
Sbjct: 145542 aaaggtcgttcgagcttttcttgggagtgtggcatgggt----tacttcggcgccgtagc 145487

                  
Query: 172    gcct 175
              ||||
Sbjct: 145486 gcct 145483



 Score =  149 bits (75), Expect = 5e-33
 Identities = 112/124 (90%), Gaps = 4/124 (3%)
 Strand = Plus / Plus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| 
Sbjct: 87249 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccacttgtc 87308

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||| ||||||| |||||| |||    |||||| ||||||||||
Sbjct: 87309 aaaggtcgttcgagcttttcttgggagtgtggcatgggt----tacttcggcgccgtagc 87364

                 
Query: 172   gcct 175
             ||||
Sbjct: 87365 gcct 87368

---

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score =  149 bits (75), Expect = 5e-33
 Identities = 116/128 (90%), Gaps = 5/128 (3%)
 Strand = Plus / Plus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttg-t 110
             ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |
Sbjct: 50997 cccctaggtattctctacctacccacctgtgtcggtttcaggtacaggtgcccttttgtt 51056

                                                                         
Query: 111   tgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtag 170
             | |||| ||||||||||||||| ||||||||||| | |||    ||||||||||||||||
Sbjct: 51057 taaaggccgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgccgtag 51112

                     
Query: 171   cgcctggt 178
             ||||||||
Sbjct: 51113 cgcctggt 51120



 Score =  149 bits (75), Expect = 5e-33
 Identities = 116/128 (90%), Gaps = 5/128 (3%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttg-t 110
             ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |
Sbjct: 38831 cccctaggtattctctacctacccacctgtgtcggtttcaggtacaggtgcccttttgtt 38772

                                                                         
Query: 111   tgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtag 170
             | |||| ||||||||||||||| ||||||||||| | |||    ||||||||||||||||
Sbjct: 38771 taaaggccgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgccgtag 38716

                     
Query: 171   cgcctggt 178
             ||||||||
Sbjct: 38715 cgcctggt 38708

---

>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16,
             complete sequence
          Length = 130718

 Score =  149 bits (75), Expect = 5e-33
 Identities = 93/99 (93%)
 Strand = Plus / Minus

                                                                         
Query: 158   ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 217
             ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||||
Sbjct: 41597 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 41538

                                                    
Query: 218   catacttcagcgctgcagcgcttggtactcggacctcgg 256
             ||||||||||||| ||||||||||||||||| |||||||
Sbjct: 41537 catacttcagcgccgcagcgcttggtactcgaacctcgg 41499

---

>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05,
              complete sequence
          Length = 158601

 Score =  149 bits (75), Expect = 5e-33
 Identities = 93/99 (93%)
 Strand = Plus / Minus

                                                                          
Query: 158    ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 217
              ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||||
Sbjct: 148068 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 148009

                                                     
Query: 218    catacttcagcgctgcagcgcttggtactcggacctcgg 256
              ||||||||||||| ||||||||||||||||| |||||||
Sbjct: 148008 catacttcagcgccgcagcgcttggtactcgaacctcgg 147970

---

>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes
          Length = 7395

 Score =  149 bits (75), Expect = 5e-33
 Identities = 116/128 (90%), Gaps = 5/128 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttg-t 110
            ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |
Sbjct: 5759 cccctaggtattctctacctacccacctgtgtcggtttcaggtacaggtgcccttttgtt 5700

                                                                        
Query: 111  tgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtag 170
            | |||| ||||||||||||||| ||||||||||| | |||    ||||||||||||||||
Sbjct: 5699 taaaggccgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgccgtag 5644

                    
Query: 171  cgcctggt 178
            ||||||||
Sbjct: 5643 cgcctggt 5636

---

>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome
          Length = 144170

 Score =  143 bits (72), Expect = 3e-31
 Identities = 112/125 (89%), Gaps = 4/125 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||||||||||||||||||| |||||||||||||  | |||
Sbjct: 137574 cccctaggtattctctacctacccacctgtgtcggtttcaggtacaggtacccactcgtt 137633

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              |||||||||||| ||||||| ||||||| ||||||  ||    |||||||||||||||||
Sbjct: 137634 gaaggtcgttcgggcttttcttgggagtgtggcatgagt----tacttcagcgccgtagc 137689

                   
Query: 172    gcctg 176
              |||||
Sbjct: 137690 gcctg 137694



 Score =  143 bits (72), Expect = 3e-31
 Identities = 112/125 (89%), Gaps = 4/125 (3%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||||||||||||||||||| |||||||||||||  | |||
Sbjct: 84303 cccctaggtattctctacctacccacctgtgtcggtttcaggtacaggtacccactcgtt 84244

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             |||||||||||| ||||||| ||||||| ||||||  ||    |||||||||||||||||
Sbjct: 84243 gaaggtcgttcgggcttttcttgggagtgtggcatgagt----tacttcagcgccgtagc 84188

                  
Query: 172   gcctg 176
             |||||
Sbjct: 84187 gcctg 84183

---

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score =  141 bits (71), Expect = 1e-30
 Identities = 89/95 (93%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||
Sbjct: 114521 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgtt 114580

                                                 
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcat 146
               ||||||||||||||||||| ||||||| ||||||
Sbjct: 114581 taaggtcgttcgagcttttcttgggagtgtggcat 114615



 Score =  141 bits (71), Expect = 1e-30
 Identities = 89/95 (93%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||
Sbjct: 87599 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgtt 87540

                                                
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcat 146
              ||||||||||||||||||| ||||||| ||||||
Sbjct: 87539 taaggtcgttcgagcttttcttgggagtgtggcat 87505



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 114488 aatagccccgtaacttcggg 114469



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aatagccccgtaacttcggg 38
             ||||||||||||||||||||
Sbjct: 87632 aatagccccgtaacttcggg 87651

---

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score =  141 bits (71), Expect = 1e-30
 Identities = 89/95 (93%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||| |||||||||||||||||||||||||||||  | |||
Sbjct: 144863 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccactcgtt 144922

                                                 
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcat 146
              |||||||||||||||||||| ||||||| ||||||
Sbjct: 144923 gaaggtcgttcgagcttttcttgggagtgtggcat 144957



 Score =  141 bits (71), Expect = 1e-30
 Identities = 89/95 (93%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||| |||||||||||||||||||||||||||||  | |||
Sbjct: 113599 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccactcgtt 113540

                                                 
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcat 146
              |||||||||||||||||||| ||||||| ||||||
Sbjct: 113539 gaaggtcgttcgagcttttcttgggagtgtggcat 113505



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 144830 aatagccccgtaacttcggg 144811



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 113632 aatagccccgtaacttcggg 113651

---

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score =  141 bits (71), Expect = 1e-30
 Identities = 114/128 (89%), Gaps = 4/128 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||
Sbjct: 116458 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgtt 116517

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               ||||||||||||||||||| ||| ||| |||||| | |    ||||||||| |||||||
Sbjct: 116518 aaaggtcgttcgagcttttcttggaagtgtggcattgat----tacttcagcaccgtagc 116573

                      
Query: 172    gcctggta 179
              ||||||||
Sbjct: 116574 gcctggta 116581



 Score =  141 bits (71), Expect = 1e-30
 Identities = 114/128 (89%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                         
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
             ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||
Sbjct: 91644 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgtt 91585

                                                                         
Query: 112   gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
              ||||||||||||||||||| ||| ||| |||||| | |    ||||||||| |||||||
Sbjct: 91584 aaaggtcgttcgagcttttcttggaagtgtggcattgat----tacttcagcaccgtagc 91529

                     
Query: 172   gcctggta 179
             ||||||||
Sbjct: 91528 gcctggta 91521



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 116425 aatagccccgtaacttcggg 116406



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aatagccccgtaacttcggg 38
             ||||||||||||||||||||
Sbjct: 91677 aatagccccgtaacttcggg 91696

---

>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 8235

 Score =  135 bits (68), Expect = 8e-29
 Identities = 114/129 (88%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||
Sbjct: 5581 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgtt 5522

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||| ||||||| ||||||  ||    |||||||||||||||||
Sbjct: 5521 aaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagc 5466

                     
Query: 172  gcctggtat 180
             ||| ||||
Sbjct: 5465 acctagtat 5457



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 5614 aatagccccgtaacttcggg 5633

---

>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence
          Length = 2819

 Score =  135 bits (68), Expect = 8e-29
 Identities = 114/129 (88%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||
Sbjct: 1691 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgtt 1632

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||| ||||||| ||||||  ||    |||||||||||||||||
Sbjct: 1631 aaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagc 1576

                     
Query: 172  gcctggtat 180
             ||| ||||
Sbjct: 1575 acctagtat 1567



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1724 aatagccccgtaacttcggg 1743

---

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score =  135 bits (68), Expect = 8e-29
 Identities = 114/129 (88%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||
Sbjct: 149554 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgtt 149613

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               ||||||||||||||||||| ||||||| ||||||  ||    |||||||||||||||||
Sbjct: 149614 aaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagc 149669

                       
Query: 172    gcctggtat 180
               ||| ||||
Sbjct: 149670 acctagtat 149678



 Score =  135 bits (68), Expect = 8e-29
 Identities = 114/129 (88%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                          
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
              ||||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||
Sbjct: 119112 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgtt 119053

                                                                          
Query: 112    gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
               ||||||||||||||||||| ||||||| ||||||  ||    |||||||||||||||||
Sbjct: 119052 aaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagc 118997

                       
Query: 172    gcctggtat 180
               ||| ||||
Sbjct: 118996 acctagtat 118988



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 149521 aatagccccgtaacttcggg 149502



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 119145 aatagccccgtaacttcggg 119164

---

>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete
            sequence
          Length = 3503

 Score =  135 bits (68), Expect = 8e-29
 Identities = 114/129 (88%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||
Sbjct: 1691 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgtt 1632

                                                                        
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagc 171
             ||||||||||||||||||| ||||||| ||||||  ||    |||||||||||||||||
Sbjct: 1631 aaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagc 1576

                     
Query: 172  gcctggtat 180
             ||| ||||
Sbjct: 1575 acctagtat 1567



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1724 aatagccccgtaacttcggg 1743

---

>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2945

 Score =  133 bits (67), Expect = 3e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||| |
Sbjct: 1652 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgct 1593

                                               
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcat 146
             ||||||||||||||||||| ||||||| ||||||
Sbjct: 1592 taaggtcgttcgagcttttcttgggagtgtggcat 1558



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1685 aatagccccgtaacttcggg 1704



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 220  tacttcagcgctgcagcgcttggtactcggac 251
            ||||||||| | | ||||||||||||||||||
Sbjct: 1553 tacttcagcaccgtagcgcttggtactcggac 1522

---

>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3020

 Score =  131 bits (66), Expect = 1e-27
 Identities = 93/102 (91%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||
Sbjct: 1691 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgtt 1632

                                                      
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcatcggttac 153
             | ||||||||||||||||| ||| ||| |||||| ||||||
Sbjct: 1631 aatggtcgttcgagcttttcttggaagtgtggcattggttac 1590



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1724 aatagccccgtaacttcggg 1743

---

>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2989

 Score =  117 bits (59), Expect = 2e-23
 Identities = 86/95 (90%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||||||||||||||||||| |||||||||||||||||||||||||||||  | | |
Sbjct: 1697 cccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccactcgct 1638

                                               
Query: 112  gaaggtcgttcgagcttttcctgggagtatggcat 146
             |||||||||||||||||||  |||||| ||||||
Sbjct: 1637 taaggtcgttcgagcttttctcgggagtgtggcat 1603



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1730 aatagccccgtaacttcggg 1749

---

>emb|X59768.1|CA23SRR C.americana 23S rRNA gene
          Length = 2902

 Score =  103 bits (52), Expect = 3e-19
 Identities = 58/60 (96%)
 Strand = Plus / Minus

                                                                        
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 111
            ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1699 cccctagatattctctacctacccacctgtgttggtttcgggtacaggtacccttttgtt 1640



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 58/66 (87%), Gaps = 4/66 (6%)
 Strand = Plus / Minus

                                                                        
Query: 113  aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 172
            |||||| ||||||||||||||||||||||||| | |||    |||||||||||||||| |
Sbjct: 1625 aaggtcattcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagtg 1570

                  
Query: 173  cctggt 178
            ||||||
Sbjct: 1569 cctggt 1564

---

>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2669

 Score =  101 bits (51), Expect = 1e-18
 Identities = 51/51 (100%)
 Strand = Plus / Minus

                                                               
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1710 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 1660

---

>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2825

 Score =  101 bits (51), Expect = 1e-18
 Identities = 51/51 (100%)
 Strand = Plus / Minus

                                                               
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1723 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 1673

---

>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2754

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1671 cccctaggtattctctacctacctacctgtgttggtttcgggtacaggtaccctttt 1615

---

>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 51/52 (98%)
 Strand = Plus / Minus

                                                                
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 103
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1848 cccctaggtattctcaacctacccacctgtgtcggtttcgggtacaggtacc 1797

---

>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2674

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 50/51 (98%)
 Strand = Plus / Minus

                                                               
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
            ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1578 cccctaggtattctctacctacccacctgtgtcggtttcaggtacaggtac 1528

---

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 49/50 (98%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2007 cccctaggtattctctacctacccacctgtgtcggtttctggtacaggta 1958

---

>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2737

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 1664 cccctaggtattctctacctacctacctgtgttggttttgggtacaggtaccctttt 1608



 Score = 46.1 bits (23), Expect = 0.054
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 120  ttcgagcttttcctgggagtatggcat 146
            |||||||||||||||||||||| ||||
Sbjct: 1588 ttcgagcttttcctgggagtatagcat 1562

---

>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2886

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1648 cccctaggtattctctacctacccacctgtgtcggttttgggtacagg 1601



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1681 aatagccccgtaacttcggg 1700

---

>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes,
            complete sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 6131

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4682 cccctaggtattctctacctacccacctgtgtcggttttgggtacagg 4635



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 4715 aatagccccgtaacttcggg 4734

---

>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene,
            complete sequence; chloroplast gene for chloroplast
            product
          Length = 2888

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1648 cccctaggtattctctacctacccacctgtgtcggttttgggtacagg 1601



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1681 aatagccccgtaacttcggg 1700

---

>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 104259

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 46/47 (97%)
 Strand = Plus / Minus

                                                            
Query: 210   acggggctcatacttcagcgctgcagcgcttggtactcggacctcgg 256
             |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 15893 acggggctcatacttcagcgctgcagtgcttggtactcggacctcgg 15847

---

>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2665

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1695 ccccttggtattctctacctacctacctgtgtcggtttcgggtacaggta 1646

---

>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; and large subunit ribosomal RNA
            (rrl) gene, partial sequence; chloroplast genes for
            chloroplast products
          Length = 4577

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3464 ccccttggtattctctacctacctacctgtgtcggtttcgggtacaggta 3415

---

>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1615 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1614 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558

---

>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2716

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            ||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||
Sbjct: 1639 cccctaggtattctctacctacctacttgtgttggtttcgggtataggtaccctttt 1583



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 120  ttcgagcttttcctgggagtat 141
            ||||||||||||||||||||||
Sbjct: 1572 ttcgagcttttcctgggagtat 1551

---

>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1615 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1615 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1615 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1615 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2696

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1614 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558

---

>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1615 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1615 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1614 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558

---

>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1615 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1615 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1615 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1614 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558

---

>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 1615 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2913

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 108
            |||| |||||||||||||||||||||||||||||||||| |||| | ||||||||||
Sbjct: 1746 cccccaggtattctctacctacccacctgtgtcggtttctggtaaaagtaccctttt 1690

---

>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2604

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 1641 cccctaggtattctctacccacccacctgtgtcggtctcgggtacagg 1594

---

>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene,
            complete sequence; chloroplast gene for chloroplast
            product
          Length = 2901

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 1654 cccctaggtattctctacccacccacctgtgtcggtctcgggtacagg 1607

---

>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) gene, complete sequence; and 5S
            ribosomal RNA (rrf) gene, partial sequence; chloroplast
            genes for chloroplast products
          Length = 7627

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 6228 cccctaggtattctctacccacccacctgtgtcggtctcgggtacagg 6181

---

>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA
            (rrl) gene, complete sequence; chloroplast gene for
            chloroplast product
          Length = 2875

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 1654 cccctaggtattctctacctacctacctgtgtcggtttcaggtacagg 1607



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 116  gtcgttcgagcttttcctgggagtatggcatcggttac 153
            |||||||||||||||| |||||||||||||| ||||||
Sbjct: 1589 gtcgttcgagcttttcttgggagtatggcataggttac 1552

---

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                              
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
              ||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 123611 cccctaggtattctctacctacctacctgtgtcggtttcaggtacagg 123658



 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                             
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
             ||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 96255 cccctaggtattctctacctacctacctgtgtcggtttcaggtacagg 96208



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                    
Query: 116    gtcgttcgagcttttcctgggagtatggcatcggttac 153
              |||||||||||||||| |||||||||||||| ||||||
Sbjct: 123676 gtcgttcgagcttttcttgggagtatggcataggttac 123713



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 116   gtcgttcgagcttttcctgggagtatggcatcggttac 153
             |||||||||||||||| |||||||||||||| ||||||
Sbjct: 96190 gtcgttcgagcttttcttgggagtatggcataggttac 96153

---

>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 2571

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                               
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
            ||||| ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 1652 ccccttggtatactctacctacctacctgtgtcggtttcgggtacaggtac 1602



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1685 aatagccccgtaacttcggg 1704

---

>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome
          Length = 118360

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                                 
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
              ||||| ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 114011 ccccttggtatactctacctacctacctgtgtcggtttcgggtacaggtac 114061



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                                
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
             ||||| ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 87977 ccccttggtatactctacctacctacctgtgtcggtttcgggtacaggtac 87927



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 113978 aatagccccgtaacttcggg 113959



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aatagccccgtaacttcggg 38
             ||||||||||||||||||||
Sbjct: 88010 aatagccccgtaacttcggg 88029

---

>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial
            sequence; and rrnL and putative site-specific DNA
            endonuclease (rrnL) genes, complete cds; chloroplast
            genes for chloroplast products
          Length = 4502

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                      
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1690 gtattctctacctacctacctgtgtcggtttcgggtacaggt 1649

---

>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome
          Length = 195867

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                        
Query: 59     gtattctctacctacccacctgtgtcggtttcgggtacaggt 100
              |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 193520 gtattctctacctacctacctgtgtcggtttcgggtacaggt 193479



 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                        
Query: 59     gtattctctacctacccacctgtgtcggtttcgggtacaggt 100
              |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 143262 gtattctctacctacctacctgtgtcggtttcgggtacaggt 143303

---

>gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2610

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                      
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1649 gtattctctacctacctacctgtgtcggtttcgggtacaggt 1608

---

>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2704

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||||||||| ||||||| ||| ||||||||||||||||||||||||||
Sbjct: 1743 cccctaggtatactctacccacctacctgtgtcggtttcgggtacaggta 1694

---

>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome
          Length = 200799

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                           
Query: 56     taggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
              |||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 169799 taggtattctctacttacctacctgtgtcggtttcgggtacaggt 169843



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                           
Query: 56     taggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
              |||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 123127 taggtattctctacttacctacctgtgtcggtttcgggtacaggt 123083

---

>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial
            sequence
          Length = 2340

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                         
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
            ||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 1188 ccccttggtattctctacctccccacctgtgtcggtttcgggtac 1144

---

>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc 104
            |||||||||||||||||||| || |||||||| |||||| |||||||||||||
Sbjct: 1615 cccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccc 1563

---

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                            
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
               ||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 2050281 cccctaggtatcctctacccacccacctgtgtcggtttcgggtac 2050325



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                            
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
               ||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 1451220 cccctaggtatcctctacccacccacctgtgtcggtttcgggtac 1451176

---

>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2571

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                         
Query: 56   taggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 1622 taggtattctctacctacctacctgtgtcggtttagggtacaggt 1578

---

>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial
            sequence; chloroplast
          Length = 2661

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                             
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||||||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct: 1708 cccctaggtatactctacccacctacctgtgtcggtttcgggtacaggt 1660

---

>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2937

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                         
Query: 56   taggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            |||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 1718 taggtattctctacttacctacctgtgtcggtttcgggtacaggt 1674

---

>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3349

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc 104
            ||||||||||||||||||||||| ||||||||||||||  |||||||| ||||
Sbjct: 1661 cccctaggtattctctacctacctacctgtgtcggttttaggtacaggcaccc 1609



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1694 aatagccccgtaacttcggg 1713

---

>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 7651

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc 104
            ||||||||||||||||||||||| ||||||||||||||  |||||||| ||||
Sbjct: 5699 cccctaggtattctctacctacctacctgtgtcggtttgaggtacaggcaccc 5647



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 5732 aatagccccgtaacttcggg 5751

---

>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3257

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc 104
            ||||||||||||||||||||||| ||||||||||||||  |||||||| ||||
Sbjct: 1666 cccctaggtattctctacctacctacctgtgtcggtttgaggtacaggcaccc 1614



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1699 aatagccccgtaacttcggg 1718

---

>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3277

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc 104
            ||||||||||||||||||||||| ||||||||||||||  |||||||| ||||
Sbjct: 1666 cccctaggtattctctacctacctacctgtgtcggtttgaggtacaggcaccc 1614



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 1699 aatagccccgtaacttcggg 1718

---

>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene
          Length = 4870

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                             
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 3400 ccccttggtatactctacctacctacctgtgtcggtttcgggtacaggt 3352

---

>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial
            sequence
          Length = 2451

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||| |||||||||||||  |||||||||||||||||||||||||||
Sbjct: 1269 cccctcggtattctctaccaccccacctgtgtcggtttcgggtacagg 1222

---

>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2840

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||||||||||||||||||||| ||||||||||||||  ||||||||
Sbjct: 1621 cccctaggtattctctacctacctacctgtgtcggttttaggtacagg 1574

---

>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                              
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
              ||||| |||||||||||||  |||||||||||||||||||||||||||
Sbjct: 357110 cccctcggtattctctaccaccccacctgtgtcggtttcgggtacagg 357063

---

>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94
          Length = 4290

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||| ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 3195 ccccttggtatactctacctacctacctgtgtcggtttcgggtacagg 3148



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 3228 aatagccccgtaacttcggg 3247

---

>gb|AY033325.1| Uncultured alpha proteobacteria MB13F01 16S ribosomal RNA gene,
            partial sequence; tRNA-Ile and tRNA-Ala genes, complete
            sequence; and 23S ribosomal RNA gene, partial sequence
          Length = 3663

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 58   ggtattctctacctacccacctgtgtcggtttcgggtac 96
            |||||||||||||| ||||||||||||||||||||||||
Sbjct: 3397 ggtattctctacctgcccacctgtgtcggtttcgggtac 3359

---

>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome
          Length = 105309

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 59    gtattctctacctacccacctgtgtcggtttcgggtacaggta 101
             ||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 17408 gtattctctacttacccacctgtgtcggtttagggtacaggta 17450



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 3458 gtattctctacttacccacctgtgtcggtttagggtacaggta 3416

---

>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome
          Length = 151933

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                         
Query: 59     gtattctctacctacccacctgtgtcggtttcgggtacaggta 101
              |||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 138160 gtatactctacctacccacctgtgtcggtttagggtacaggta 138118



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 59    gtattctctacctacccacctgtgtcggtttcgggtacaggta 101
             |||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 47384 gtatactctacctacccacctgtgtcggtttagggtacaggta 47426

---

>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2927

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 45/47 (95%), Gaps = 1/47 (2%)
 Strand = Plus / Minus

                                                           
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacag 98
            ||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 1754 cccctaggtattctctacctacctacctgtgtc-gtttcgggtacag 1709



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 36/38 (94%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                  
Query: 19   aatagccccgtaacttcgggnagnaaggggtgccccct 56
            |||||||||||||||||||| || ||||||||||||||
Sbjct: 1787 aatagccccgtaacttcggg-ag-aaggggtgccccct 1822

---

>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2691

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacag 98
            ||||||||||||||| ||||||||||||||||||||||  |||||||
Sbjct: 1592 cccctaggtattctcaacctacccacctgtgtcggttttaggtacag 1546

---

>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain SAG 34.90
          Length = 4586

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtaca 97
            ||||||||||||||||||||||||||||||| |||||||
Sbjct: 3502 gtattctctacctacccacctgtgtcggtttggggtaca 3464

---

>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial
            sequence
          Length = 2446

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||| |||| || ||||||||||||||||||||||||||
Sbjct: 1263 ccccttggtattctcaacctccctacctgtgtcggtttcgggtacaggta 1214

---

>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence
          Length = 2441

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||||||||||| || |||||||||||||||||||||||||
Sbjct: 1254 gtattctctaccttcctacctgtgtcggtttcgggtacaggt 1213

---

>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA (rrnL)
            gene
          Length = 3403

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 1894 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1845

---

>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL)
            gene
          Length = 5398

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||| ||||||||||| ||||||||||||||||||||| ||||
Sbjct: 1828 ccccttggtatactctacctacctacctgtgtcggtttcgggtacgggta 1779

---

>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA
            (rrnL) gene
          Length = 3875

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            |||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 1688 gtattctctaccaacccacctgtgtcggtttggggtacaggt 1647

---

>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL),
            site-specific DNA endonuclease I-CkoI genes
          Length = 5105

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 3117 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 3068

---

>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL),
            site-specific DNA endonuclease I-CcaI genes
          Length = 5999

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 3842 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 3793

---

>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4038

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 1738 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1689

---

>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 3923

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 1748 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1699

---

>gb|L44123.1|CMJCPRGOL Chlorococcum echinozygotum chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CecI gene
          Length = 7283

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 1974 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1925

---

>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 2792

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 1819 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1770

---

>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CmuI gene
          Length = 3744

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 1740 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1691

---

>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                         
Query: 59      gtattctctacctacccacctgtgtcggtttcgggtacaggt 100
               ||||||||||||| || |||||||||||||||||||||||||
Sbjct: 3328651 gtattctctaccttcctacctgtgtcggtttcgggtacaggt 3328610



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                         
Query: 59      gtattctctacctacccacctgtgtcggtttcgggtacaggt 100
               ||||||||||||| || |||||||||||||||||||||||||
Sbjct: 2450077 gtattctctaccttcctacctgtgtcggtttcgggtacaggt 2450118

---

>emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL gene, exon 1
          Length = 2676

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 1748 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1699

---

>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1
          Length = 2572

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 1738 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1689

---

>emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene, exon 2
          Length = 659

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 52  cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
           ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 393 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 344

---

>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene
          Length = 3017

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 1787 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1738

---

>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene
          Length = 2904

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 1687 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1638

---

>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence
          Length = 3359

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            ||||||||||| ||||||| ||| |||||||||||||| |||||||||||
Sbjct: 2076 cccctaggtatactctacccacctacctgtgtcggtttggggtacaggta 2027

---

>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                           
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
              ||||| |||||||||||||  ||||||||||||||||||||||||
Sbjct: 321234 cccctcggtattctctaccaccccacctgtgtcggtttcgggtac 321190

---

>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence;
            internal transcribed spacer 1, complete sequence;
            tRNA-Ile gene, complete sequence; and 23S ribosomal RNA
            gene, partial sequence
          Length = 3320

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||||||||| | |||||||||||||||||||||||||||
Sbjct: 3167 gtattctctacttccccacctgtgtcggtttcgggtacagg 3127

---

>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence;
            tRNA-Ile gene and 16S-23S ribosomal RNA intergenic
            spacer, complete sequences; and 23S ribosomal RNA gene,
            partial sequence
          Length = 3321

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||||||||| | |||||||||||||||||||||||||||
Sbjct: 3168 gtattctctacttccccacctgtgtcggtttcgggtacagg 3128

---

>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome
          Length = 161452

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                               
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
              ||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 154504 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 154552



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                              
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
             ||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 79388 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 79340

---

>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene,
            partial sequence; tRNA-Ile and tRNA-Ala genes, complete
            sequence; and 23S ribosomal RNA gene, partial sequence
          Length = 3916

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
            ||||| |||||||||||||  ||||||||||||||||||||||||
Sbjct: 3657 cccctcggtattctctaccaccccacctgtgtcggtttcgggtac 3613

---

>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene,
            partial sequence; tRNA-Ile and tRNA-Ala genes, complete
            sequence; and 23S ribosomal RNA gene, partial sequence
          Length = 3917

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
            ||||| |||||||||||||  ||||||||||||||||||||||||
Sbjct: 3658 cccctcggtattctctaccaccccacctgtgtcggtttcgggtac 3614

---

>gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosomal RNA gene, partial
            sequence; tRNA-Ile and tRNA-Ala genes, complete sequence;
            and 23S ribosomal RNA gene, partial sequence
          Length = 4141

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
            ||||| |||||||||||||  ||||||||||||||||||||||||
Sbjct: 3882 cccctcggtattctctaccaccccacctgtgtcggtttcgggtac 3838

---

>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial
            sequence
          Length = 2435

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||||||||| | |||||||||||||||||||||||||||
Sbjct: 1251 gtattctctacttccccacctgtgtcggtttcgggtacagg 1211

---

>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence
          Length = 38521

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                          
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
             ||||| |||||||||||||  ||||||||||||||||||||||||
Sbjct: 19223 cccctcggtattctctaccaccccacctgtgtcggtttcgggtac 19267

---

>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence
          Length = 37884

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                         
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
            ||||| |||||||||||||  ||||||||||||||||||||||||
Sbjct: 977  cccctcggtattctctaccaccccacctgtgtcggtttcgggtac 1021

---

>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                            
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
               ||||| |||||||||||||  ||||||||||||||||||||||||
Sbjct: 1667109 cccctcggtattctctaccaccccacctgtgtcggtttcgggtac 1667065

---

>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5
          Length = 349742

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                           
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
              ||||| |||||||||||||  ||||||||||||||||||||||||
Sbjct: 316723 cccctcggtattctctaccaccccacctgtgtcggtttcgggtac 316679

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                            
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
               ||||| ||||| ||||||| |||||||||||||||||||||||||
Sbjct: 2313871 cccctcggtatcctctacccacccacctgtgtcggtttcgggtac 2313827



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                            
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
               ||||| ||||| ||||||| |||||||||||||||||||||||||
Sbjct: 1107976 cccctcggtatcctctacccacccacctgtgtcggtttcgggtac 1108020

---

>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene
          Length = 3334

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||| ||||||||||||||||| || |||||| |||||||||||||||
Sbjct: 1669 ccccttggtattctctacctacctacttgtgtcagtttcgggtacaggt 1621

---

>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CmoI genes
          Length = 8176

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 2110 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 2062

---

>gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4406

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 1688 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 1640

---

>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 5575

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 2530 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 2482

---

>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2568

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||| |||||||||||||| |||||||||||||||||  |||||||||
Sbjct: 1618 ccccttggtattctctacctccccacctgtgtcggtttatggtacaggt 1570

---

>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 3397

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 1949 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 1901

---

>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2552

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||| ||||||||||||||||| || |||||| |||||||||||||||
Sbjct: 1601 ccccttggtattctctacctacctacttgtgtcagtttcgggtacaggt 1553

---

>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome
          Length = 203828

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                               
Query: 52     cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
              ||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 150703 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 150751



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                              
Query: 52    cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
             ||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 43500 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 43452

---

>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) gene, complete sequence; and putative site-specific
            DNA endonuclease (orf167) gene, complete cds; chloroplast
            genes for chloroplast products
          Length = 5476

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||| ||||||||||||||||| || |||||| |||||||||||||||
Sbjct: 3407 ccccttggtattctctacctacctacttgtgtcagtttcgggtacaggt 3359

---

>emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL gene, exon 1
          Length = 1964

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 1688 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 1640

---

>emb|X68924.1|CHCSRRNX2 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 2
          Length = 1291

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 52  cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
           ||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 683 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 635

---

>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA
          Length = 2603

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 100
            ||||| ||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 1672 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 1624

---

>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain M 0880
          Length = 4934

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtac 96
            ||||| |||||||||||||  ||||||||||||||||||||||||
Sbjct: 3849 cccctcggtattctctaccaccccacctgtgtcggtttcgggtac 3805

---

>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
          Length = 135599

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                       
Query: 59     gtattctctacctacccacctgtgtcggtttcgggtacagg 99
              ||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 113755 gtattctctacttacccacctgtgtcggttttgggtacagg 113795



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 3762 gtattctctacttacccacctgtgtcggttttgggtacagg 3722



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatagccccgtaacttcggg 38
              ||||||||||||||||||||
Sbjct: 113715 aatagccccgtaacttcggg 113696



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatagccccgtaacttcggg 38
            ||||||||||||||||||||
Sbjct: 3802 aatagccccgtaacttcggg 3821

---

>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence
          Length = 2435

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||| ||||||||| |||| || ||||||||||||||||||||||||
Sbjct: 1259 ccccttggtattctcaacctccctacctgtgtcggtttcgggtacagg 1212

---

>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4181

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||
Sbjct: 1706 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacagg 1659

---

>gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 3498

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||
Sbjct: 1741 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacagg 1694

---

>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2664

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
            ||||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 1709 gtattctctacttgcccacctgtgtcggtttggggtacaggtac 1666

---

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                   
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 103
               ||||| ||||||||| |||| || ||||||||||||||||||||| ||||||
Sbjct: 5943820 ccccttggtattctcaacctccctacctgtgtcggtttcgggtacgggtacc 5943871



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                   
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 103
               ||||| ||||||||| |||| || ||||||||||||||||||||| ||||||
Sbjct: 4916176 ccccttggtattctcaacctccctacctgtgtcggtttcgggtacgggtacc 4916227



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                   
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 103
               ||||| ||||||||| |||| || ||||||||||||||||||||| ||||||
Sbjct: 2504120 ccccttggtattctcaacctccctacctgtgtcggtttcgggtacgggtacc 2504069



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                   
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 103
               ||||| ||||||||| |||| || ||||||||||||||||||||| ||||||
Sbjct: 2380800 ccccttggtattctcaacctccctacctgtgtcggtttcgggtacgggtacc 2380749

---

>emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL gene, exon 1
          Length = 2668

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||
Sbjct: 1741 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacagg 1694

---

>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1
          Length = 1965

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 99
            ||||| ||||||||||||| ||| ||||||||||||||| ||||||||
Sbjct: 1706 ccccttggtattctctaccaacctacctgtgtcggtttcaggtacagg 1659

---

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                      
Query: 58      ggtattctctacctacccacctgtgtcggtttcgggtac 96
               |||||||||||||  ||||||||||||||||||||||||
Sbjct: 2137161 ggtattctctaccaccccacctgtgtcggtttcgggtac 2137199



 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                     
Query: 58     ggtattctctacctacccacctgtgtcggtttcgggtac 96
              |||||||||||||  ||||||||||||||||||||||||
Sbjct: 477699 ggtattctctaccaccccacctgtgtcggtttcgggtac 477661

---

>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                      
Query: 58      ggtattctctacctacccacctgtgtcggtttcgggtac 96
               |||||||||||||  ||||||||||||||||||||||||
Sbjct: 1774859 ggtattctctaccaccccacctgtgtcggtttcgggtac 1774897



 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                     
Query: 58     ggtattctctacctacccacctgtgtcggtttcgggtac 96
              |||||||||||||  ||||||||||||||||||||||||
Sbjct: 377210 ggtattctctaccaccccacctgtgtcggtttcgggtac 377172

---

>gb|AY033324.1| Uncultured alpha proteobacterium MB11C09 16S ribosomal RNA gene,
            partial sequence; tRNA-Ile and tRNA-Ala genes, complete
            sequence; and 23S ribosomal RNA gene, partial sequence
          Length = 4073

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 58   ggtattctctacctacccacctgtgtcggtttcgggtac 96
            ||||||||||||||| |||||||||||||||| ||||||
Sbjct: 3806 ggtattctctacctatccacctgtgtcggtttagggtac 3768

---

>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial
            sequence; tRNA-Ile and tRNA-Ala genes, complete sequence;
            and 23S ribosomal RNA gene, partial sequence
          Length = 4137

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 58   ggtattctctacctacccacctgtgtcggtttcgggtac 96
            |||||||||||||  ||||||||||||||||||||||||
Sbjct: 3873 ggtattctctaccaccccacctgtgtcggtttcgggtac 3835

---

>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial
            sequence
          Length = 2381

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
            ||||| ||||| |||||||  || |||||||||||||||||||||||||||
Sbjct: 1206 cccctcggtatactctaccaccctacctgtgtcggtttcgggtacaggtac 1156

---

>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial
            sequence
          Length = 2381

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
            ||||| ||||| |||||||  || |||||||||||||||||||||||||||
Sbjct: 1206 cccctcggtatactctaccaccctacctgtgtcggtttcgggtacaggtac 1156

---

>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial
            sequence
          Length = 2390

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
            ||||| ||||||||| |||| || ||||||||||||||||||||| |||||
Sbjct: 1206 ccccttggtattctcaacctccctacctgtgtcggtttcgggtacgggtac 1156

---

>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene,
            partial sequence
          Length = 2389

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 52   cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
            ||||| ||||||||| |||| || ||||||||||||||||||||| |||||
Sbjct: 1206 ccccttggtattctcaacctccctacctgtgtcggtttcgggtacgggtac 1156

---

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                  
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
               ||||| ||||||||| |||| || ||||||||||||||||||||| |||||
Sbjct: 5433777 ccccttggtattctcaacctccctacctgtgtcggtttcgggtacgggtac 5433827



 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                  
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
               ||||| ||||||||| |||| || ||||||||||||||||||||| |||||
Sbjct: 3897661 ccccttggtattctcaacctccctacctgtgtcggtttcgggtacgggtac 3897611



 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                  
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
               ||||| ||||||||| |||| || ||||||||||||||||||||| |||||
Sbjct: 2806498 ccccttggtattctcaacctccctacctgtgtcggtttcgggtacgggtac 2806548



 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                  
Query: 52      cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 102
               ||||| ||||||||| |||| || ||||||||||||||||||||| |||||
Sbjct: 1006504 ccccttggtattctcaacctccctacctgtgtcggtttcgggtacgggtac 1006454

---

>gb|AY264666.1| Arsenophonus endosymbiont of Aleyrodes elevatus 16S ribosomal RNA
            gene, partial sequence; tRNA-Glu gene, complete sequence;
            and 23S ribosomal RNA gene, partial sequence
          Length = 4613

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtaca 97
            |||||||||||||| |||||||||||||||| |||||||
Sbjct: 3695 gtattctctacctaaccacctgtgtcggtttggggtaca 3657

---

>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome
          Length = 22085

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                       
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            |||| ||||||||||||||||||||||||||  ||||||||||
Sbjct: 7394 gtatactctacctacccacctgtgtcggtttatggtacaggta 7352

---

>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7
          Length = 349122

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 58     ggtattctctacctacccacctgtgtcggtttcgggtac 96
              |||||||||||||  ||||||||||||||||||||||||
Sbjct: 338414 ggtattctctaccaccccacctgtgtcggtttcgggtac 338452



 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 58     ggtattctctacctacccacctgtgtcggtttcgggtac 96
              |||||||||||||  ||||||||||||||||||||||||
Sbjct: 131474 ggtattctctaccaccccacctgtgtcggtttcgggtac 131512

---

>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA
            genecluster
          Length = 5001

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                       
Query: 59   gtattctctacctacccacctgtgtcggtttcgggtacaggta 101
            |||| ||||||||||||||||||||||||||  ||||||||||
Sbjct: 4455 gtatactctacctacccacctgtgtcggtttatggtacaggta 4413


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,147,528
Number of Sequences: 3902068
Number of extensions: 1147528
Number of successful extensions: 22037
Number of sequences better than 10.0: 1005
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 18639
Number of HSP's gapped (non-prelim): 3113
length of query: 256
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 234
effective length of database: 17,147,199,772
effective search space: 4012444746648
effective search space used: 4012444746648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---