>OPN4_HUMAN (Q9UHM6) Melanopsin (Opsin-4)|
          Length = 478

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 11/27 (40%), Positives = 21/27 (77%)
 Frame = -2

Query: 172 TPKKLFLLDLAVNRFIIFFTSSPLFLS 92
           TP  +F+++LAV+ F++ FT +P+F +
Sbjct: 103 TPANMFIINLAVSDFLMSFTQAPVFFT 129

>OPN4_FELCA (Q5YKK9) Melanopsin (Opsin-4)|
          Length = 487

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -2

Query: 172 TPKKLFLLDLAVNRFIIFFTSSPLFLS 92
           TP  +F+++LAV+ F + FT +P+F +
Sbjct: 98  TPANMFIINLAVSDFFMSFTQAPVFFA 124

>OPN4_RAT (Q8R456) Melanopsin (Opsin-4)|
          Length = 474

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -2

Query: 172 TPKKLFLLDLAVNRFIIFFTSSPLFLS 92
           TP  + +++LAV+ F++ FT +P+F +
Sbjct: 103 TPANMLIINLAVSDFLMSFTQAPVFFA 129

>OPN4_PHOSU (Q5XXP2) Melanopsin (Opsin-4)|
          Length = 469

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -2

Query: 172 TPKKLFLLDLAVNRFIIFFTSSPLFLS 92
           TP  + +++LAV+ F++ FT +P+F +
Sbjct: 102 TPANMLIINLAVSDFLMSFTQAPVFFA 128

>CEMA_SPIOL (Q9M3L4) Chloroplast envelope membrane protein|
          Length = 229

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -1

Query: 350 WFMYLEFSKSIKSW*LDWLHIEHTK 276
           W++YL F KS++SW   W + + ++
Sbjct: 21  WWIYLSFQKSLESWVTTWWNTKQSE 45

>OPN4_MOUSE (Q9QXZ9) Melanopsin (Opsin-4)|
          Length = 521

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -2

Query: 172 TPKKLFLLDLAVNRFIIFFTSSPLFLS 92
           TP  +F+++LAV+ F++  T +P+F +
Sbjct: 102 TPANMFIINLAVSDFLMSVTQAPVFFA 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,401,557
Number of Sequences: 219361
Number of extensions: 1196093
Number of successful extensions: 2698
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2698
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)