ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd0e04 |
|---|---|
| Clone Library Name | barley_pub |
>RL171_HORVU (P35266) 60S ribosomal protein L17-1| Length = 170 Score = 114 bits (284), Expect = 8e-26 Identities = 55/57 (96%), Positives = 55/57 (96%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIARKA 197 YISHIQVNQAQK RRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAES IARKA Sbjct: 114 YISHIQVNQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESHIARKA 170
>RL172_HORVU (P35267) 60S ribosomal protein L17-2| Length = 172 Score = 105 bits (263), Expect = 2e-23 Identities = 52/58 (89%), Positives = 55/58 (94%), Gaps = 1/58 (1%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIA-RKA 197 YISHIQVNQAQK RRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEA++ +A RKA Sbjct: 114 YISHIQVNQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEADNVVAPRKA 171
>RL171_ARATH (Q93VI3) 60S ribosomal protein L17-1| Length = 176 Score = 104 bits (260), Expect = 5e-23 Identities = 49/57 (85%), Positives = 53/57 (92%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIARKA 197 +ISHIQVNQA K RRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKE E+Q+A K+ Sbjct: 114 FISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKS 170
>RL172_ARATH (P51413) 60S ribosomal protein L17-2| Length = 175 Score = 104 bits (260), Expect = 5e-23 Identities = 49/57 (85%), Positives = 53/57 (92%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIARKA 197 +ISHIQVNQA K RRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKE E+Q+A K+ Sbjct: 114 FISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKS 170
>RL17_MAIZE (O48557) 60S ribosomal protein L17| Length = 171 Score = 102 bits (255), Expect = 2e-22 Identities = 47/56 (83%), Positives = 53/56 (94%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIARK 200 Y+SHIQVNQAQK RRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEA++ +A + Sbjct: 114 YVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAAR 169
>RL17B_YEAST (P46990) 60S ribosomal protein L17-B (YL17-B)| Length = 183 Score = 83.6 bits (205), Expect = 1e-16 Identities = 39/61 (63%), Positives = 48/61 (78%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIARKA*RR 188 Y+SHIQVNQA K RRRTYRAHGRIN Y S+P HIEL+++EKEE V K AE ++ R R+ Sbjct: 112 YVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAAEKKVVRLTSRQ 171 Query: 187 K 185 + Sbjct: 172 R 172
>RL17A_YEAST (P05740) 60S ribosomal protein L17-A (YL17-A)| Length = 183 Score = 83.6 bits (205), Expect = 1e-16 Identities = 39/61 (63%), Positives = 48/61 (78%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIARKA*RR 188 Y+SHIQVNQA K RRRTYRAHGRIN Y S+P HIEL+++EKEE V K AE ++ R R+ Sbjct: 112 YVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAAEKKVVRLTSRQ 171 Query: 187 K 185 + Sbjct: 172 R 172
>RL17_ASPFU (Q6MY48) 60S ribosomal protein L17| Length = 194 Score = 82.0 bits (201), Expect = 3e-16 Identities = 37/46 (80%), Positives = 41/46 (89%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKK 227 + HIQVNQA K RRRTYRAHGRINPYM+NPCHIELIL+E EE V+K Sbjct: 121 VKHIQVNQAPKGRRRTYRAHGRINPYMTNPCHIELILTEGEETVQK 166
>RL17_RAT (P24049) 60S ribosomal protein L17 (L23) (Amino acid| starvation-induced protein) (ASI) Length = 183 Score = 82.0 bits (201), Expect = 3e-16 Identities = 39/55 (70%), Positives = 47/55 (85%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIARK 200 I HIQVN+A K RRRTYRAHGRINPYMS+PCHIE+IL+EKE+ V K E ++A+K Sbjct: 113 IEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQK 166
>RL17_MOUSE (Q9CPR4) 60S ribosomal protein L17 (L23)| Length = 183 Score = 82.0 bits (201), Expect = 3e-16 Identities = 39/55 (70%), Positives = 47/55 (85%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIARK 200 I HIQVN+A K RRRTYRAHGRINPYMS+PCHIE+IL+EKE+ V K E ++A+K Sbjct: 113 IEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQK 166
>RL17_HUMAN (P18621) 60S ribosomal protein L17 (L23)| Length = 183 Score = 82.0 bits (201), Expect = 3e-16 Identities = 39/55 (70%), Positives = 47/55 (85%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIARK 200 I HIQVN+A K RRRTYRAHGRINPYMS+PCHIE+IL+EKE+ V K E ++A+K Sbjct: 113 IEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQK 166
>RL17_FELCA (Q5XTY7) 60S ribosomal protein L17| Length = 183 Score = 82.0 bits (201), Expect = 3e-16 Identities = 39/55 (70%), Positives = 47/55 (85%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIARK 200 I HIQVN+A K RRRTYRAHGRINPYMS+PCHIE+IL+EKE+ V K E ++A+K Sbjct: 113 IEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQK 166
>RL17_NEUCR (Q9HE25) 60S ribosomal protein L17| Length = 186 Score = 82.0 bits (201), Expect = 3e-16 Identities = 37/46 (80%), Positives = 41/46 (89%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKK 227 + HIQVNQA K RRRTYRAHGRINPYMSNPCHIELIL+E +E V+K Sbjct: 114 VKHIQVNQAPKQRRRTYRAHGRINPYMSNPCHIELILTEADEVVQK 159
>RL17_PODCA (P37380) 60S ribosomal protein L17 (L23)| Length = 183 Score = 81.3 bits (199), Expect = 5e-16 Identities = 38/61 (62%), Positives = 47/61 (77%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIARKA*RRK 185 I HIQVN+A RRRTYRAHGRINPYMS+PCHIE+I+SEKE+ V + E +K ++K Sbjct: 114 IDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEMIVSEKEQVVPRAEEEVEVKKVSKKK 173 Query: 184 L 182 L Sbjct: 174 L 174
>RL17_DEBHA (Q6BM53) 60S ribosomal protein L17| Length = 185 Score = 79.3 bits (194), Expect = 2e-15 Identities = 37/54 (68%), Positives = 44/54 (81%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIAR 203 +SHIQVNQA K RRRTYRAHGRIN Y S+PCHIELIL+E+ E V+K +S+ R Sbjct: 114 VSHIQVNQAPKQRRRTYRAHGRINAYQSSPCHIELILTEENEAVEKADDSKKVR 167
>RL17_YARLI (Q6CBS7) 60S ribosomal protein L17| Length = 184 Score = 77.0 bits (188), Expect = 1e-14 Identities = 38/60 (63%), Positives = 45/60 (75%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIARKA*RRK 185 ISHIQVNQA K RRRTYRAHGRIN Y S+P HIELILSE E + K E+ +A + R++ Sbjct: 114 ISHIQVNQAPKQRRRTYRAHGRINAYQSSPSHIELILSEPAEEIAKAKETSLAHISSRQR 173
>RL17B_SCHPO (O59794) 60S ribosomal protein L17-B| Length = 187 Score = 66.6 bits (161), Expect = 1e-11 Identities = 29/46 (63%), Positives = 37/46 (80%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKK 227 I H+QVN A K RRRTYRAHGR+ Y+S+P HIE+I++E+EE V K Sbjct: 114 IKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVAEEEEAVPK 159
>RL17A_SCHPO (O14339) 60S ribosomal protein L17-A| Length = 187 Score = 66.6 bits (161), Expect = 1e-11 Identities = 29/46 (63%), Positives = 37/46 (80%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKK 227 I H+QVN A K RRRTYRAHGR+ Y+S+P HIE+I++E+EE V K Sbjct: 114 IKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVAEEEEAVPK 159
>RK22_NYMAL (Q6EW12) Chloroplast 50S ribosomal protein L22| Length = 125 Score = 33.5 bits (75), Expect = 0.13 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEK 245 +IS +VN+ +R RA GR P CHI ++LSE+ Sbjct: 77 FISKAEVNEGVIVKRLKPRARGRSYPIKRPTCHITIVLSER 117
>RK22_PEA (P23408) 50S ribosomal protein L22, chloroplast precursor (CL22)| Length = 204 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAES 215 +IS +VN+ + +R RA GR N + CHI + + + KE S Sbjct: 153 FISKAEVNEGKTLKRVRARAQGRANQILKRTCHITITVRGLPDESDKEENS 203
>RL22_METKA (Q8TX36) 50S ribosomal protein L22P| Length = 159 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEK 245 YI HI ++ + R RA GR P+ + HIE+IL E+ Sbjct: 119 YIKHIAAHKGRVIRGWIPRAFGRATPFNTPTTHIEVILEER 159
>RK22_MARPO (P06388) Chloroplast 50S ribosomal protein L22| Length = 119 Score = 32.0 bits (71), Expect = 0.38 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILS 251 +IS IQVN+ +R RA GR P CHI ++L+ Sbjct: 77 FISEIQVNKGTFFKRFQPRAQGRGYPIHKPTCHITIVLN 115
>RK22_PICAB (O62952) Chloroplast 50S ribosomal protein L22| Length = 142 Score = 32.0 bits (71), Expect = 0.38 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSE 248 +S ++VN+ +R RA GR P CHI ++L E Sbjct: 81 VSRVEVNEGAVFKRVQPRAQGRGYPIQKPTCHITIVLEE 119
>RK22_ARATH (P56795) Chloroplast 50S ribosomal protein L22| Length = 160 Score = 31.6 bits (70), Expect = 0.50 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSE 248 IS +VNQ ++ RA GR P + CHI ++L + Sbjct: 81 ISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLED 119
>CACB2_BOVIN (Q9MZL5) Voltage-dependent L-type calcium channel beta-2 subunit| (CAB2) (Calcium channel, voltage-dependent, beta 2 subunit) Length = 603 Score = 31.2 bits (69), Expect = 0.65 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -1 Query: 328 RRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQ 212 RRR ++G + Y S P ++ L E E V++EAE Q Sbjct: 9 RRRARVSYGSADSYTSRPSDSDVSLEEDREAVRREAERQ 47
>RL22_METJA (P54033) 50S ribosomal protein L22P| Length = 156 Score = 30.8 bits (68), Expect = 0.84 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSE 248 I HI N+ +R RA GR P HI++IL E Sbjct: 116 IKHISTNKGITIKRYMPRAFGRATPKFQETVHIQVILEE 154
>RL22_LACJO (Q74L84) 50S ribosomal protein L22| Length = 117 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEE 239 Y+S VN+ +R RA G +P H+ +++SEK + Sbjct: 75 YVSEAYVNEGATLKRFRPRAKGMASPINKRTSHVVVVVSEKND 117
>RK22_MEDSA (P49163) 50S ribosomal protein L22, chloroplast precursor (CL22)| Length = 200 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIEL 260 IS +VN+ + +R RA GR N + CHI + Sbjct: 150 ISKAEVNEGRTMKRTRPRAQGRANRILKRTCHITI 184
>RL22_METMP (P62649) 50S ribosomal protein L22P| Length = 153 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSE 248 I HI N+ +R RA GR +P HI++IL E Sbjct: 113 IKHISSNRGFTIKRYMPRAFGRASPKNQETIHIQVILEE 151
>CYAA_USTMA (P49606) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)| (Adenylyl cyclase) Length = 2493 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +1 Query: 124 HSAKPXATKXSNE*VDR*CXASFSRPSWQ-SGTQPPSSPALPSQTRSA 264 HS++P T S+ R A++SRP ++ + TQPP+ P Q RS+ Sbjct: 72 HSSQPDITASSSTLSSRLVSANYSRPRFEHAHTQPPT----PDQDRSS 115
>ITSN1_MOUSE (Q9Z0R4) Intersectin-1 (EH and SH3 domains protein 1)| Length = 1714 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPY----MSNPCHIELILSEKEEP 236 I + VN + + R+HG+ NPY M + CHI + + P Sbjct: 1588 IGRLMVNVVEGIELKPCRSHGKSNPYCEVTMGSQCHITKTIQDTLNP 1634
>ITSN1_HUMAN (Q15811) Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)| Length = 1721 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPY----MSNPCHIELILSEKEEP 236 I + VN + + R+HG+ NPY M + CHI + + P Sbjct: 1595 IGRLMVNVVEGIELKPCRSHGKSNPYCEVTMGSQCHITKTIQDTLNP 1641
>RK22_OENHO (Q9MTI6) Chloroplast 50S ribosomal protein L22| Length = 137 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSE 248 IS +VN+ ++ RA GR P CHI ++L + Sbjct: 78 ISKAEVNEGTTVKKLKPRARGRSYPIRRPTCHIRIVLQD 116
>ARNT_RAT (P41739) Aryl hydrocarbon receptor nuclear translocator (ARNT| protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta) Length = 800 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 4/32 (12%) Frame = +1 Query: 193 SRPSWQSGTQPPSSPALPSQ----TRSAQCGM 276 S P+W S T+P S LP+Q TRS+Q G+ Sbjct: 647 SAPTWTSSTRPGFSAQLPTQATAKTRSSQFGV 678
>RL22_MYCMS (Q6MSN0) 50S ribosomal protein L22| Length = 111 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKE 242 Y+ I VN+ +R RAHGR H+ +++S+++ Sbjct: 70 YVKTIFVNEGPTLKRFRPRAHGRAYEIFKRTSHVVIVVSDEK 111
>RL22_MYCCT (P10139) 50S ribosomal protein L22| Length = 111 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKE 242 Y+ I VN+ +R RAHGR H+ +++S+++ Sbjct: 70 YVKTIFVNEGPTLKRFRPRAHGRAYEIFKRTSHVVIVVSDEK 111
>MEP2_YEAST (P41948) Ammonium transporter MEP2| Length = 499 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Frame = -1 Query: 136 VWLSGMXCPVICRXXTASSXFVKVSXNGFDSGLC------XGNIFHRILMG 2 +W++ + CP+ C A VK+ + GLC G + + +++G Sbjct: 159 LWMTIVYCPIACWVWNAEGWLVKLGSLDYAGGLCVHLTSGHGGLVYALILG 209
>MEGF6_HUMAN (O75095) Multiple epidermal growth factor-like domains 6 precursor| (EGF-like domain-containing protein 3) (Multiple EGF-like domain protein 3) Length = 1229 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = +1 Query: 259 SAQCGMGWTCRG*CVHEHGRSCAXASGPGSLGCA 360 S CG+GWT GR C A PG G A Sbjct: 1084 SCSCGLGWT---------GRHCELACPPGRYGAA 1108
>RDRP_SMYEA (P28897) RNA replication protein (150 kDa protein) (ORF 1 protein)| [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); Helicase (EC 3.6.1.-)] Length = 1323 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +1 Query: 217 TQPPSSPALPSQTRSAQCGMGWTCRG*CVHEHG 315 T PP+SPA P+ QC W + +HG Sbjct: 475 TTPPASPAAPADAEYTQCWAAWDT---VIRKHG 504
>RK22_PINTH (P52771) Chloroplast 50S ribosomal protein L22| Length = 142 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELI---LSEKEEPV 233 + ++VN+ +R RA GR P CHI ++ +S +P+ Sbjct: 81 VGRVEVNEGAVFKRIQPRAQGRGYPIQKPTCHITIVSEEISRSNDPI 127
>RK22_PINKO (Q85WY9) Chloroplast 50S ribosomal protein L22| Length = 142 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELI---LSEKEEPV 233 + ++VN+ +R RA GR P CHI ++ +S +P+ Sbjct: 81 VGRVEVNEGAVLKRIQPRAQGRGYPIQKPTCHITIVSEEISRSNDPI 127
>RK22_CALFE (Q7YJT9) Chloroplast 50S ribosomal protein L22| Length = 140 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEE 239 +IS +VN ++ RA GR P CHI ++L ++ + Sbjct: 84 FISKAEVNGGTIVKKFKPRAKGRSYPIKRPTCHITIVLKDRSK 126
>XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-)| Length = 915 Score = 28.1 bits (61), Expect = 5.5 Identities = 10/27 (37%), Positives = 12/27 (44%) Frame = +1 Query: 286 CRG*CVHEHGRSCAXASGPGSLGCAKC 366 C G C G+ C GPG + C C Sbjct: 448 CSGLCTIPEGKQCPSGEGPGWVCCLDC 474
>RL22_THEAC (Q9HIR4) 50S ribosomal protein L22P| Length = 151 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/42 (28%), Positives = 24/42 (57%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEE 239 I HI N+ + ++ T +A+GR + ++E+I++E E Sbjct: 110 IKHIAANKGRMIKKYTPKAYGRAGANFKDLINLEIIVTEGSE 151
>RL22_PSESM (Q889W6) 50S ribosomal protein L22| Length = 110 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/40 (30%), Positives = 23/40 (57%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEK 245 +S + VN+ + +R RA GR + + CHI + +++K Sbjct: 71 VSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVADK 110
>RL22_PSEPK (Q88QN0) 50S ribosomal protein L22| Length = 110 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/40 (30%), Positives = 23/40 (57%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEK 245 +S + VN+ + +R RA GR + + CHI + +++K Sbjct: 71 VSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVADK 110
>RL22_PSEAE (Q9HWE0) 50S ribosomal protein L22| Length = 110 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/40 (30%), Positives = 23/40 (57%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEK 245 +S + VN+ + +R RA GR + + CHI + +++K Sbjct: 71 VSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVADK 110
>RL22_TREPA (O83224) 50S ribosomal protein L22| Length = 124 Score = 27.7 bits (60), Expect = 7.2 Identities = 10/40 (25%), Positives = 22/40 (55%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSE 248 ++ IQ+++ + +R R GR + + CHI +++ E Sbjct: 75 FVRDIQIDEGPRLKRLWCRGRGRGDVQLKRMCHITVVVEE 114
>RL22_SPIKU (Q6XYY1) 50S ribosomal protein L22| Length = 112 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEE 239 +I I VN+ +R RAHGR + HI + +S+ ++ Sbjct: 70 FIKEIFVNEGPTLKRFRPRAHGRAYEILKRTSHITVTVSDGQQ 112
>RK22_PELHO (P24283) Chloroplast 50S ribosomal protein L22| Length = 137 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSE 248 IS +VN+ ++ RA G+ P + CHI ++L + Sbjct: 81 ISKAEVNEGPTAKKFKPRAKGQSYPIKRSTCHITIVLRD 119
>RL22_HALMA (P10970) 50S ribosomal protein L22P (Hmal22) (Hl23)| Length = 154 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKE 242 I H+ ++ + + R RA GR + + S +ELIL E E Sbjct: 111 IKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEPE 151
>RL22_MYCPU (Q98PY6) 50S ribosomal protein L22| Length = 110 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/41 (24%), Positives = 22/41 (53%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEK 245 Y+S++ VN+ +R + GR + H+ +++SE+ Sbjct: 70 YVSNVMVNEGPTLKRFQPHSQGRATRILKRTSHLSVMVSER 110
>AGRN_HUMAN (O00468) Agrin precursor| Length = 2045 Score = 27.3 bits (59), Expect = 9.3 Identities = 17/55 (30%), Positives = 24/55 (43%) Frame = +1 Query: 199 PSWQSGTQPPSSPALPSQTRSAQCGMGWTCRG*CVHEHGRSCAXASGPGSLGCAK 363 PS G +PP+ P S C G TC+ + G +C+ +G G C K Sbjct: 1315 PSRVPGRRPPAPQQPPKPCDSQPCFHGGTCQDWAL-GGGFTCSCPAGRGGAVCEK 1368
>RL22_SPICI (O31160) 50S ribosomal protein L22| Length = 112 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -1 Query: 367 YISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEE 239 +I I VN+ +R RAHGR + HI + +S+ ++ Sbjct: 70 FIKEIFVNERPTLKRFRPRAHGRAYEILKRTSHITVTVSDGQQ 112
>RL22_LACLA (Q9CDW7) 50S ribosomal protein L22| Length = 115 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSEKE 242 +S +N+ +R RA G +P HI ++++EKE Sbjct: 75 VSETFINEGPTMKRFRPRAKGSASPINKRTAHITVVVAEKE 115
>RK22_TOBAC (P06389) Chloroplast 50S ribosomal protein L22| Length = 155 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSE 248 IS +VN ++ RA GR P + CHI +++ + Sbjct: 77 ISKAEVNGGTTVKKLKPRARGRSFPIKRSTCHITIVMKD 115
>RK22_ATRBE (Q8S8V4) Chloroplast 50S ribosomal protein L22| Length = 155 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = -1 Query: 364 ISHIQVNQAQKXRRRTYRAHGRINPYMSNPCHIELILSE 248 IS +VN ++ RA GR P + CHI +++ + Sbjct: 77 ISKAEVNGGTTVKKLKPRARGRSFPIKRSTCHITIVMKD 115
>ATG16_EMENI (Q5BH90) Autophagy protein 16| Length = 202 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/42 (28%), Positives = 26/42 (61%) Frame = -1 Query: 343 QAQKXRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAE 218 + +K RRR + RI+ S H++L L +++E ++++A+ Sbjct: 106 ELEKLRRRNIQNGKRISSMESEITHLQLRLKDRDEELREKAK 147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,485,682 Number of Sequences: 219361 Number of extensions: 645205 Number of successful extensions: 2124 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 2071 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2124 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
