ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd0e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|M74077.1|WHTUBICP T.aestivum ubiquitin carrier protein mRNA 860 0.0
2dbj|AK112030.1| Oryza sativa (japonica cultivar-group) cDNA clon... 321 1e-84
3dbj|AK104148.1| Oryza sativa (japonica cultivar-group) cDNA clon... 321 1e-84
4dbj|AK099038.1| Oryza sativa (japonica cultivar-group) cDNA clon... 321 1e-84
5ref|NM_190524.1| Oryza sativa (japonica cultivar-group), predic... 309 5e-81
6dbj|AK098861.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 9e-49
7emb|AJ002959.1|ZMAJ2959 Zea mays mRNA for ubiquitin carrier prot... 200 4e-48
8gb|AY103605.1| Zea mays PCO117734 mRNA sequence 200 4e-48
9ref|XM_475366.1| Oryza sativa (japonica cultivar-group), predic... 194 2e-46
10dbj|AK111999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
11dbj|AK111857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
12gb|BT016440.1| Zea mays clone Contig273 mRNA sequence 192 9e-46
13gb|BT019147.1| Zea mays clone Contig802.F mRNA sequence 190 3e-45
14gb|AF032468.1|AF032468 Zea mays ubiquitin-conjugating enzyme pro... 190 3e-45
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
16dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
17dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
18ref|NM_125320.1| Arabidopsis thaliana UBC7; ubiquitin conjugatin... 103 6e-19
19gb|AY080733.1| Arabidopsis thaliana putative E2, ubiquitin-conju... 103 6e-19
20emb|BX833817.1|CNS0A23A Arabidopsis thaliana Full-length cDNA Co... 103 6e-19
21gb|BT005798.1| Arabidopsis thaliana clone C105469 putative E2, u... 103 6e-19
22ref|NM_115396.2| Arabidopsis thaliana ubiquitin conjugating enzy... 96 2e-16
23gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome... 96 2e-16
24gb|AY117262.1| Arabidopsis thaliana putative E2 ubiquitin-conjug... 96 2e-16
25emb|X72625.1|ATUCEE2A A.thaliana UbcAT3 mRNA for ubiquitin conju... 96 2e-16
26gb|AY045883.1| Arabidopsis thaliana putative E2, ubiquitin-conju... 96 2e-16
27gb|AF462205.1| Narcissus pseudonarcissus putative ubiquitin conj... 96 2e-16
28dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
29emb|BX825254.1|CNS0A53C Arabidopsis thaliana Full-length cDNA Co... 96 2e-16
30gb|AY086490.1| Arabidopsis thaliana clone 25382 mRNA, complete s... 96 2e-16
31gb|DQ027028.1| Arabidopsis thaliana ubiquitinating enzyme (At3g5... 96 2e-16
32emb|BX833254.1|CNS0A238 Arabidopsis thaliana Full-length cDNA Co... 92 2e-15
33ref|NM_114513.3| Arabidopsis thaliana ubiquitin conjugating enzy... 82 2e-12
34gb|AY094040.1| Arabidopsis thaliana AT3g46460/F18L15_180 mRNA, c... 82 2e-12
35gb|AY050368.1| Arabidopsis thaliana AT3g46460/F18L15_180 mRNA, c... 82 2e-12
36gb|DQ027027.1| Arabidopsis thaliana ubiquitinating enzyme (At3g4... 82 2e-12
37gb|DQ284482.1| Solanum tuberosum clone 178D03 ubiquitin-conjugat... 76 1e-10
38gb|DQ284455.1| Solanum tuberosum clone 007A03 putative E2 ubiqui... 76 1e-10
39gb|DQ252513.1| Solanum tuberosum clone 089D04 ubiquitin-conjugat... 76 1e-10
40emb|BX825758.1|CNS0A66U Arabidopsis thaliana Full-length cDNA Co... 74 6e-10
41emb|BX842105.1|CNS09YES Arabidopsis thaliana Full-length cDNA Co... 74 6e-10
42gb|U33759.1|ATU33759 Arabidopsis ubiquitin conjugating enzyme E2... 68 3e-08
43emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, B... 68 3e-08
44emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, B... 66 1e-07
45gb|U33758.1|ATU33758 Arabidopsis ubiquitin conjugating enzyme E2... 66 1e-07
46ref|XM_824383.1| Trypanosoma brucei TREU927 ubiquitin-conjugatin... 64 5e-07
47dbj|AK102646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
48ref|XM_661133.1| Cryptosporidium hominis TU502 ubiquitin conjuga... 58 3e-05
49ref|XM_627901.1| Cryptosporidium parvum Iowa II ubiquitin conjug... 58 3e-05
50dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 58 3e-05
51gb|U33757.1|ATU33757 Arabidopsis thaliana ubiquitin conjugating ... 58 3e-05
52ref|XM_618072.2| PREDICTED: Bos taurus similar to ubiquitin-conj... 48 0.032
53ref|XM_872923.1| PREDICTED: Bos taurus similar to ubiquitin-conj... 48 0.032
54ref|XM_843428.1| PREDICTED: Canis familiaris similar to ubiquiti... 48 0.032
55ref|XM_718691.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 48 0.032
56ref|XM_661132.1| Cryptosporidium hominis TU502 hypothetical prot... 48 0.032
57gb|AY261360.1| African swine fever virus isolate Kenya 1950, com... 46 0.12
58ref|XM_673209.1| Plasmodium berghei strain ANKA ubiquitin conjug... 44 0.49
59gb|BC101493.1| Homo sapiens endoplasmic reticulum protein 29, tr... 42 1.9
60gb|BC101495.1| Homo sapiens endoplasmic reticulum protein 29, tr... 42 1.9
61ref|NM_006817.3| Homo sapiens endoplasmic reticulum protein 29 (... 42 1.9
62gb|M77121.1|ASVI226R African swine fever virus I226R protein, pu... 42 1.9
63ref|XM_864044.1| PREDICTED: Bos taurus similar to endoplasmic re... 42 1.9
64gb|AY261366.1| African swine fever virus isolate Warthog, comple... 42 1.9
65gb|AY261365.1| African swine fever virus isolate Warmbaths, comp... 42 1.9
66gb|AC146033.2| Pan troglodytes BAC clone RP43-14B18 from 7, comp... 42 1.9
67gb|AC124544.4| Mus musculus BAC clone RP23-266K17 from 8, comple... 42 1.9
68gb|AC006463.4| Homo sapiens BAC clone RP11-395G17 from 7, comple... 42 1.9
69gb|DQ148252.1| Macaca mulatta clone sl1_e22_t7_490 ERp28 protein... 42 1.9
70gb|DQ148154.1| Macaca mulatta clone sl1_a03_t7_369 endoplasmic r... 42 1.9
71emb|X94910.1|HSERP28 Homo sapiens mRNA for ERp28 protein 42 1.9
72emb|AL445065.1|TACID3 Thermoplasma acidophilum complete genome; ... 42 1.9
73emb|CR625433.1| full-length cDNA clone CS0DK008YM02 of HeLa cell... 42 1.9
74emb|CR623789.1| full-length cDNA clone CS0DI079YL05 of Placenta ... 42 1.9
75emb|CR617833.1| full-length cDNA clone CS0DL010YA17 of B cells (... 42 1.9
76emb|CR617687.1| full-length cDNA clone CS0DL001YK02 of B cells (... 42 1.9
77emb|CR611287.1| full-length cDNA clone CS0DI072YH08 of Placenta ... 42 1.9
78emb|CR604444.1| full-length cDNA clone CS0DI043YB01 of Placenta ... 42 1.9
79emb|CR603906.1| full-length cDNA clone CS0DH002YC21 of T cells (... 42 1.9
80emb|CR602804.1| full-length cDNA clone CS0DC009YD12 of Neuroblas... 42 1.9
81emb|CR602432.1| full-length cDNA clone CS0DF036YH02 of Fetal bra... 42 1.9
82emb|CR600542.1| full-length cDNA clone CS0DI006YC12 of Placenta ... 42 1.9
83emb|CR594614.1| full-length cDNA clone CS0DJ008YF23 of T cells (... 42 1.9
84gb|AC069307.7| Homo sapiens BAC clone RP11-738E22 from 4, comple... 42 1.9
85emb|CR541667.1| Homo sapiens full open reading frame cDNA clone ... 42 1.9
86gb|AC073575.30| Homo sapiens 12 PAC RP1-267L14 (Roswell Park Can... 42 1.9
87emb|AL928641.14| Mouse DNA sequence from clone RP23-272N6 on chr... 42 1.9
88gb|AC133195.4| Mus musculus BAC clone RP23-133F6 from 8, complet... 42 1.9
89gb|U18466.1|ASU18466 African swine fever virus, complete genome 42 1.9
90ref|XM_520535.1| PREDICTED: Pan troglodytes similar to ubiquitin... 40 7.7
91ref|XM_422648.1| PREDICTED: Gallus gallus similar to ubiquitin-c... 40 7.7
92ref|XM_864424.1| PREDICTED: Bos taurus similar to ubiquitin-conj... 40 7.7
93ref|XM_872974.1| PREDICTED: Bos taurus similar to ubiquitin-conj... 40 7.7
94ref|XM_872892.1| PREDICTED: Bos taurus similar to ubiquitin-conj... 40 7.7
95ref|XM_872790.1| PREDICTED: Bos taurus similar to ubiquitin-conj... 40 7.7
96gb|BC004862.2| Homo sapiens ubiquitin-conjugating enzyme E2R 2, ... 40 7.7
97ref|NM_017811.3| Homo sapiens ubiquitin-conjugating enzyme E2R 2... 40 7.7
98gb|AY261364.1| African swine fever virus isolate Tengani 62, com... 40 7.7
99ref|XM_001002125.1| PREDICTED: Mus musculus ubiquitin-conjugatin... 40 7.7
100ref|XM_849513.1| PREDICTED: Canis familiaris similar to ubiquiti... 40 7.7
101gb|BC028294.1| Homo sapiens mRNA similar to keratin 1 (epidermol... 40 7.7
102emb|AL732583.5| Human DNA sequence from clone XX-111B on chromos... 40 7.7
103emb|AL139113.21| Human DNA sequence from clone RP11-176F3 on chr... 40 7.7
104emb|CR457233.1| Homo sapiens full open reading frame cDNA clone ... 40 7.7
105gb|BC047584.1| Homo sapiens ubiquitin-conjugating enzyme E2R 2, ... 40 7.7
106emb|AJ240087.1|HSA240087 Homo sapiens mRNA for ubiquitin-coniuga... 40 7.7
107emb|AJ240086.1|MMU240086 Mus musculus mRNA for ubiquitin coniuga... 40 7.7
108gb|AC007922.13| Homo sapiens chromosome 18, clone RP11-178F10, c... 40 7.7
109gb|AC023983.11| Homo sapiens chromosome 18, clone RP11-621L6, co... 40 7.7
110gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, com... 40 7.7
111dbj|AK003550.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 7.7
112dbj|AK007517.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 40 7.7
113dbj|AK075714.1| Mus musculus adult male liver cDNA, RIKEN full-l... 40 7.7
114dbj|AK075703.1| Mus musculus adult male lung cDNA, RIKEN full-le... 40 7.7
115gb|AC009275.8| Homo sapiens chromosome 7 clone RP11-38M8, comple... 40 7.7
116gb|AY261362.1| African swine fever virus isolate Mkuzi 1979, com... 40 7.7
117gb|AY830100.1| Phytophthora infestans copia-like retrotransposon... 40 7.7
118dbj|AK000426.1| Homo sapiens cDNA FLJ20419 fis, clone KAT02435 40 7.7
119gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, co... 40 7.7
120gb|BC011112.1| Mus musculus ubiquitin-conjugating enzyme E2R 2, ... 40 7.7
121emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-9... 40 7.7
122gb|AC115692.6| Mus musculus chromosome 18, clone RP23-463G11, co... 40 7.7
123emb|AL807823.6| Mouse DNA sequence from clone RP23-328E6 on chro... 40 7.7
124ref|NM_026275.2| Mus musculus ubiquitin-conjugating enzyme E2R 2... 40 7.7
125gb|U58652.1|OCU58652 Oryctolagus cuniculus ubiquitin-conjugating... 40 7.7

>gb|M74077.1|WHTUBICP T.aestivum ubiquitin carrier protein mRNA
          Length = 802

 Score =  860 bits (434), Expect = 0.0
 Identities = 537/566 (94%), Gaps = 8/566 (1%)
 Strand = Plus / Minus

                                                                       
Query: 2   ttgatagccgaagcn-cacaattacaacaaccaggcccttagaataagggttgcgttttc 60
           ||||||||||||||  |||||||||||||||||  ||||||||||| | |||||||||||
Sbjct: 773 ttgatagccgaagccacacaattacaacaaccaaacccttagaatatgtgttgcgttttc 714

                                                                       
Query: 61  agagccaaaaccaagacctccacaggagacaggccaatggaaaatatacaggggagaagt 120
           |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 713 agagtcaaaaccaagacctccacaggagacaggctaatggaaaatatacaggggagaagt 654

                                                                       
Query: 121 gaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctccacacctgaaa 180
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 653 gaaattgctagtgtcggatggacatttggagatcaacagcaaaaccctccacacctgaaa 594

                                                                       
Query: 181 tggcatggctaacttccccggtactcccattttattcagagcatttcctgggatttcctt 240
           ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 593 tggcatggctaacttccccagtactcccattttattcagagcatttcctgggatttccgt 534

                                                                       
Query: 241 acggcacgcctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgct 300
           ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 533 acggcgcgcctgaccttcttcttgaactcatcctgcttctctctccagtccttagctgct 474

                                                                       
Query: 301 tcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatact 360
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 473 tcaatatttgccggtgattcatcatttggactagaaagcatcgaaatgatgcttaatact 414

                                                                       
Query: 361 atactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgg 420
           ||||||||||||||||||||   ||||||||||||||||| |||||||| |||||||| |
Sbjct: 413 atactctcaaccgtatggac--tggtgtccaacgctcacttgcgagctcatatccgtttg 356

                                                                       
Query: 421 gatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccggataaacattag 480
           ||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||
Sbjct: 355 gatcatcaccaggtggat---gaatagaaatgcatacccgcccatctggataaacattag 299

                                                                       
Query: 481 gatgccacatttcaagaagtgaatctaactgttggagggctgttcggataatttttgtgg 540
           ||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 298 gatgccacatttc-agaagtgaatctgactgttggagggctgttcggataa-ttttgtgg 241

                                     
Query: 541 gaagctcataatagcattgaaatagc 566
           |||||||||||| |||||||||||||
Sbjct: 240 gaagctcataattgcattgaaatagc 215



to top

>dbj|AK112030.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E11, full
           insert sequence
          Length = 1158

 Score =  321 bits (162), Expect = 1e-84
 Identities = 383/449 (85%), Gaps = 7/449 (1%)
 Strand = Plus / Minus

                                                                       
Query: 111 ggggagaagtgaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctcc 170
           ||||||||||||| |||||||||||   || ||||||||| ||||||||| ||| | | |
Sbjct: 855 ggggagaagtgaa-ttgctagtgtcaactg-acatttggaaatcgacagccaaatcatgc 798

                                                                       
Query: 171 acacctgaaatggcatggctaactt-ccccggtactcccattttattcagagcatttcct 229
           |||  |||  ||| |||| |||||| |||| ||||| ||  ||| ||||||||||||| |
Sbjct: 797 acatgtgacgtggtatggttaactttccccagtactgccggtttcttcagagcatttctt 738

                                                                       
Query: 230 gggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagt 289
           | |||||||||||    ||||||||||| |||||||| ||||||  |||||||||||| |
Sbjct: 737 gtgatttccttacaaggcgcctaacctttttcttgaagtcatccctcttctctctccatt 678

                                                                       
Query: 290 cctttgctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatga 349
           |||| ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||
Sbjct: 677 ccttagctgcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatga 618

                                                                       
Query: 350 tgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctc 409
           |||| |  ||||| |||||||||||||| ||   |||||||||||||||||||| |||||
Sbjct: 617 tgctcagaactatgctctcaaccgtatgcac--tggtgtccaacgctcactcgcaagctc 560

                                                                       
Query: 410 gtatccgttgggatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccgg 469
            || || ||||||||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 559 ataaccattgggatcatcaccaggcggatgaagaatagaaatgcatacacgtccatccgg 500

                                                                       
Query: 470 ataaacattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggat 529
           ||||||||| ||||||||||||||  || || ||||| || |||||||| ||||| ||||
Sbjct: 499 ataaacatttggatgccacatttc-tgaggtaaatctgacagttggaggactgttaggat 441

                                        
Query: 530 aatttttgtgggaagctcataatagcatt 558
           || || ||||| |||||||| || |||||
Sbjct: 440 aa-ttctgtggaaagctcattattgcatt 413



to top

>dbj|AK104148.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-B05, full
           insert sequence
          Length = 1123

 Score =  321 bits (162), Expect = 1e-84
 Identities = 383/449 (85%), Gaps = 7/449 (1%)
 Strand = Plus / Minus

                                                                       
Query: 111 ggggagaagtgaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctcc 170
           ||||||||||||| |||||||||||   || ||||||||| ||||||||| ||| | | |
Sbjct: 767 ggggagaagtgaa-ttgctagtgtcaactg-acatttggaaatcgacagccaaatcatgc 710

                                                                       
Query: 171 acacctgaaatggcatggctaactt-ccccggtactcccattttattcagagcatttcct 229
           |||  |||  ||| |||| |||||| |||| ||||| ||  ||| ||||||||||||| |
Sbjct: 709 acatgtgacgtggtatggttaactttccccagtactgccggtttcttcagagcatttctt 650

                                                                       
Query: 230 gggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagt 289
           | |||||||||||    ||||||||||| |||||||| ||||||  |||||||||||| |
Sbjct: 649 gtgatttccttacaaggcgcctaacctttttcttgaagtcatccctcttctctctccatt 590

                                                                       
Query: 290 cctttgctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatga 349
           |||| ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||
Sbjct: 589 ccttagctgcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatga 530

                                                                       
Query: 350 tgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctc 409
           |||| |  ||||| |||||||||||||| ||   |||||||||||||||||||| |||||
Sbjct: 529 tgctcagaactatgctctcaaccgtatgcac--tggtgtccaacgctcactcgcaagctc 472

                                                                       
Query: 410 gtatccgttgggatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccgg 469
            || || ||||||||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 471 ataaccattgggatcatcaccaggcggatgaagaatagaaatgcatacacgtccatccgg 412

                                                                       
Query: 470 ataaacattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggat 529
           ||||||||| ||||||||||||||  || || ||||| || |||||||| ||||| ||||
Sbjct: 411 ataaacatttggatgccacatttc-tgaggtaaatctgacagttggaggactgttaggat 353

                                        
Query: 530 aatttttgtgggaagctcataatagcatt 558
           || || ||||| |||||||| || |||||
Sbjct: 352 aa-ttctgtggaaagctcattattgcatt 325



to top

>dbj|AK099038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135H01, full
           insert sequence
          Length = 1111

 Score =  321 bits (162), Expect = 1e-84
 Identities = 383/449 (85%), Gaps = 7/449 (1%)
 Strand = Plus / Minus

                                                                       
Query: 111 ggggagaagtgaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctcc 170
           ||||||||||||| |||||||||||   || ||||||||| ||||||||| ||| | | |
Sbjct: 810 ggggagaagtgaa-ttgctagtgtcaactg-acatttggaaatcgacagccaaatcatgc 753

                                                                       
Query: 171 acacctgaaatggcatggctaactt-ccccggtactcccattttattcagagcatttcct 229
           |||  |||  ||| |||| |||||| |||| ||||| ||  ||| ||||||||||||| |
Sbjct: 752 acatgtgacgtggtatggttaactttccccagtactgccggtttcttcagagcatttctt 693

                                                                       
Query: 230 gggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagt 289
           | |||||||||||    ||||||||||| |||||||| ||||||  |||||||||||| |
Sbjct: 692 gtgatttccttacaaggcgcctaacctttttcttgaagtcatccctcttctctctccatt 633

                                                                       
Query: 290 cctttgctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatga 349
           |||| ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||
Sbjct: 632 ccttagctgcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatga 573

                                                                       
Query: 350 tgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctc 409
           |||| |  ||||| |||||||||||||| ||   |||||||||||||||||||| |||||
Sbjct: 572 tgctcagaactatgctctcaaccgtatgcac--tggtgtccaacgctcactcgcaagctc 515

                                                                       
Query: 410 gtatccgttgggatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccgg 469
            || || ||||||||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 514 ataaccattgggatcatcaccaggcggatgaagaatagaaatgcatacacgtccatccgg 455

                                                                       
Query: 470 ataaacattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggat 529
           ||||||||| ||||||||||||||  || || ||||| || |||||||| ||||| ||||
Sbjct: 454 ataaacatttggatgccacatttc-tgaggtaaatctgacagttggaggactgttaggat 396

                                        
Query: 530 aatttttgtgggaagctcataatagcatt 558
           || || ||||| |||||||| || |||||
Sbjct: 395 aa-ttctgtggaaagctcattattgcatt 368



to top

>ref|NM_190524.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 510

 Score =  309 bits (156), Expect = 5e-81
 Identities = 299/343 (87%), Gaps = 4/343 (1%)
 Strand = Plus / Minus

                                                                       
Query: 216 tcagagcatttcctgggatttccttacggcacgcctaaccttcttcttgaactcatcctg 275
           |||||||||||| || |||||||||||    ||||||||||| |||||||| ||||||  
Sbjct: 510 tcagagcatttcttgtgatttccttacaaggcgcctaacctttttcttgaagtcatccct 451

                                                                       
Query: 276 cttctctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactaga 335
           |||||||||||| ||||| ||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 450 cttctctctccattccttagctgcttcaatatttgctggtgattcatcatttggaccaga 391

                                                                       
Query: 336 aagcatcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgc 395
           |||||||||||||||||| |  ||||| |||||||||||||| ||   ||||||||||||
Sbjct: 390 aagcatcgaaatgatgctcagaactatgctctcaaccgtatgcac--tggtgtccaacgc 333

                                                                       
Query: 396 tcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcat 455
           |||||||| ||||| || || ||||||||||||||||| |||||||||||||||||||||
Sbjct: 332 tcactcgcaagctcataaccattgggatcatcaccaggcggatgaagaatagaaatgcat 273

                                                                       
Query: 456 acccgcccatccggataaacattaggatgccacatttcaagaagtgaatctaactgttgg 515
           || || ||||||||||||||||| ||||||||||||||  || || ||||| || |||||
Sbjct: 272 acacgtccatccggataaacatttggatgccacatttc-tgaggtaaatctgacagttgg 214

                                                      
Query: 516 agggctgttcggataatttttgtgggaagctcataatagcatt 558
           ||| ||||| |||||| || ||||| |||||||| || |||||
Sbjct: 213 aggactgttaggataa-ttctgtggaaagctcattattgcatt 172



to top

>dbj|AK098861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O01, full
           insert sequence
          Length = 912

 Score =  202 bits (102), Expect = 9e-49
 Identities = 207/241 (85%), Gaps = 2/241 (0%)
 Strand = Plus / Minus

                                                                       
Query: 250 ctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatattt 309
           |||||||| |||||||| || |||  ||| |||||||| ||||| || ||||||||||||
Sbjct: 596 ctaacctttttcttgaaatcgtccctcttttctctccaatccttagccgcttcaatattt 537

                                                                       
Query: 310 gccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctca 369
           || || || |||||||| |||||||| ||||||||||||||||| |  |||||||| |||
Sbjct: 536 gctggagactcatcatttggactagagagcatcgaaatgatgctcagaactatactttca 477

                                                                       
Query: 370 accgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcac 429
           || ||||| ||   ||||||||||| || ||||| ||||| || ||||||||||| || |
Sbjct: 476 actgtatgcaca--ggtgtccaacgttcgctcgcaagctcataaccgttgggatcttcgc 419

                                                                       
Query: 430 caggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccaca 489
           ||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 418 caggtggatgaaggatagaaatgcatacgcgcccatcaggataaacatttggatgccaca 359

            
Query: 490 t 490
           |
Sbjct: 358 t 358



to top

>emb|AJ002959.1|ZMAJ2959 Zea mays mRNA for ubiquitin carrier protein UBC7
          Length = 780

 Score =  200 bits (101), Expect = 4e-48
 Identities = 319/388 (82%), Gaps = 4/388 (1%)
 Strand = Plus / Minus

                                                                       
Query: 174 cctgaaatggcatggctaacttccccggtactcccattttattcagagcatttcctggga 233
           ||||| ||||||||| ||||||| || | ||||||||||  |||||| ||||||||| ||
Sbjct: 631 cctgacatggcatggttaacttcaccagcactcccatttccttcagaacatttcctgtga 572

                                                                       
Query: 234 tttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagtcctt 293
           |||||  |||   ||||||||||| |||||||| || |||  ||  || ||||| |||||
Sbjct: 571 tttccgcacgatgcgcctaacctttttcttgaaatcctccctctgttccctccattcctt 512

                                                                       
Query: 294 tgctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgct 353
            ||||| ||||| ||||| || || |||||||| |||||||| ||||| || || |||||
Sbjct: 511 agctgcctcaatgtttgctggagactcatcatttggactagagagcattgatataatgct 452

                                                                       
Query: 354 taatactatactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctcgtat 413
            |  ||||| || || || || || ||   |||||||| |||||||| |||||||| || 
Sbjct: 451 cagaactatgctttctactgtgtgcaca--ggtgtccatcgctcacttgcgagctcataa 394

                                                                       
Query: 414 ccgttgggatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccggataa 473
           ||||| ||||| ||||||||||||||||||||||| || || ||||||||||| ||||| 
Sbjct: 393 ccgtttggatcttcaccaggtggatgaagaatagagatacaaacccgcccatcaggatag 334

                                                                       
Query: 474 acattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggataatt 533
           ||||| |||||||||||||| ||| || ||||| |||| ||| |||||||| || ||| |
Sbjct: 333 acatttggatgccacatttc-agaggtaaatctgactgatggcgggctgtttgggtaa-t 276

                                       
Query: 534 tttgtgggaagctcataatagcattgaa 561
           |||||||||||||||| || ||||||||
Sbjct: 275 tttgtgggaagctcattattgcattgaa 248



to top

>gb|AY103605.1| Zea mays PCO117734 mRNA sequence
          Length = 1205

 Score =  200 bits (101), Expect = 4e-48
 Identities = 319/388 (82%), Gaps = 4/388 (1%)
 Strand = Plus / Minus

                                                                       
Query: 174 cctgaaatggcatggctaacttccccggtactcccattttattcagagcatttcctggga 233
           ||||| ||||||||| ||||||| || | ||||||||||  |||||| ||||||||| ||
Sbjct: 810 cctgagatggcatggttaacttcgccaggactcccatttccttcagaacatttcctgtga 751

                                                                       
Query: 234 tttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagtcctt 293
           |||||  |||   ||||||||||| |||||||| || |||  ||  || ||||| |||||
Sbjct: 750 tttccgcacgatgcgcctaacctttttcttgaaatcctccctctgttccctccattcctt 691

                                                                       
Query: 294 tgctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgct 353
            ||||| ||||| ||||| || || |||||||| |||||||| ||||| || || |||||
Sbjct: 690 agctgcctcaatgtttgctggagactcatcatttggactagagagcattgatataatgct 631

                                                                       
Query: 354 taatactatactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctcgtat 413
            |  ||||| || || || || || ||   |||||||| |||||||| |||||||| || 
Sbjct: 630 cagaactatgctttctactgtgtgcaca--ggtgtccatcgctcacttgcgagctcataa 573

                                                                       
Query: 414 ccgttgggatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccggataa 473
           ||||| ||||| ||||||||||||||||||||||| || || ||||||||||| ||||| 
Sbjct: 572 ccgtttggatcttcaccaggtggatgaagaatagagatacaaacccgcccatcaggatag 513

                                                                       
Query: 474 acattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggataatt 533
           ||||| |||||||||||||| ||| || ||||| |||| ||| |||||||| || ||| |
Sbjct: 512 acatttggatgccacatttc-agaggtaaatctgactgatggcgggctgtttgggtaa-t 455

                                       
Query: 534 tttgtgggaagctcataatagcattgaa 561
           |||||||||||||||| || ||||||||
Sbjct: 454 tttgtgggaagctcattattgcattgaa 427



to top

>ref|XM_475366.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 510

 Score =  194 bits (98), Expect = 2e-46
 Identities = 206/241 (85%), Gaps = 2/241 (0%)
 Strand = Plus / Minus

                                                                       
Query: 250 ctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatattt 309
           |||||||| |||||||| || |||  ||| |||||||| ||||| || ||||||||||||
Sbjct: 476 ctaacctttttcttgaaatcgtccctcttttctctccaatccttagccgcttcaatattt 417

                                                                       
Query: 310 gccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctca 369
           || || || |||||||| |||||||| ||||||||||||||||| |  |||||||| |||
Sbjct: 416 gctggagactcatcatttggactagagagcatcgaaatgatgctcagaactatactttca 357

                                                                       
Query: 370 accgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcac 429
           || ||||| ||   |||||||| || || ||||| ||||| || ||||||||||| || |
Sbjct: 356 actgtatgcaca--ggtgtccaccgttcgctcgcaagctcataaccgttgggatcttcgc 299

                                                                       
Query: 430 caggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccaca 489
           ||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 298 caggtggatgaaggatagaaatgcatacgcgcccatcaggataaacatttggatgccaca 239

            
Query: 490 t 490
           |
Sbjct: 238 t 238



to top

>dbj|AK111999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F08, full
           insert sequence
          Length = 1037

 Score =  194 bits (98), Expect = 2e-46
 Identities = 206/241 (85%), Gaps = 2/241 (0%)
 Strand = Plus / Minus

                                                                       
Query: 250 ctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatattt 309
           |||||||| |||||||| || |||  ||| |||||||| ||||| || ||||||||||||
Sbjct: 595 ctaacctttttcttgaaatcgtccctcttttctctccaatccttagccgcttcaatattt 536

                                                                       
Query: 310 gccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctca 369
           || || || |||||||| |||||||| ||||||||||||||||| |  |||||||| |||
Sbjct: 535 gctggagactcatcatttggactagagagcatcgaaatgatgctcagaactatactttca 476

                                                                       
Query: 370 accgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcac 429
           || ||||| ||   |||||||| || || ||||| ||||| || ||||||||||| || |
Sbjct: 475 actgtatgcaca--ggtgtccaccgttcgctcgcaagctcataaccgttgggatcttcgc 418

                                                                       
Query: 430 caggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccaca 489
           ||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 417 caggtggatgaaggatagaaatgcatacgcgcccatcaggataaacatttggatgccaca 358

            
Query: 490 t 490
           |
Sbjct: 357 t 357



to top

>dbj|AK111857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021F14, full
           insert sequence
          Length = 1125

 Score =  194 bits (98), Expect = 2e-46
 Identities = 206/241 (85%), Gaps = 2/241 (0%)
 Strand = Plus / Minus

                                                                       
Query: 250 ctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatattt 309
           |||||||| |||||||| || |||  ||| |||||||| ||||| || ||||||||||||
Sbjct: 585 ctaacctttttcttgaaatcgtccctcttttctctccaatccttagccgcttcaatattt 526

                                                                       
Query: 310 gccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctca 369
           || || || |||||||| |||||||| ||||||||||||||||| |  |||||||| |||
Sbjct: 525 gctggagactcatcatttggactagagagcatcgaaatgatgctcagaactatactttca 466

                                                                       
Query: 370 accgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcac 429
           || ||||| ||   |||||||| || || ||||| ||||| || ||||||||||| || |
Sbjct: 465 actgtatgcaca--ggtgtccaccgttcgctcgcaagctcataaccgttgggatcttcgc 408

                                                                       
Query: 430 caggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccaca 489
           ||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 407 caggtggatgaaggatagaaatgcatacgcgcccatcaggataaacatttggatgccaca 348

            
Query: 490 t 490
           |
Sbjct: 347 t 347



to top

>gb|BT016440.1| Zea mays clone Contig273 mRNA sequence
          Length = 1135

 Score =  192 bits (97), Expect = 9e-46
 Identities = 318/388 (81%), Gaps = 4/388 (1%)
 Strand = Plus / Minus

                                                                       
Query: 174 cctgaaatggcatggctaacttccccggtactcccattttattcagagcatttcctggga 233
           ||||| ||||||||| ||||||| || | ||||||||||  |||||| ||||||||| ||
Sbjct: 796 cctgacatggcatggttaacttcaccaggactcccatttccttcagaacatttcctgtga 737

                                                                       
Query: 234 tttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagtcctt 293
           |||||  |||   ||||||||||| |||||||| || |||  ||  || ||||| |||||
Sbjct: 736 tttccgcacgatgcgcctaacctttttcttgaaatcctccctctgttccctccattcctt 677

                                                                       
Query: 294 tgctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgct 353
            ||||| ||||| ||||| || || |||||||| |||||||| ||||| || || |||||
Sbjct: 676 agctgcctcaatgtttgctggagactcatcatttggactagagagcattgatataatgct 617

                                                                       
Query: 354 taatactatactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctcgtat 413
            |  ||||| || || || || || ||   |||||||| |||||||| || ||||| || 
Sbjct: 616 cagaactatgctttctactgtgtgcaca--ggtgtccatcgctcacttgctagctcataa 559

                                                                       
Query: 414 ccgttgggatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccggataa 473
           ||||| ||||| ||||||||||||||||||||||| || || ||||||||||| ||||| 
Sbjct: 558 ccgtttggatcttcaccaggtggatgaagaatagagatacaaacccgcccatcaggatag 499

                                                                       
Query: 474 acattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggataatt 533
           ||||| |||||||||||||| ||| || ||||| |||| ||| |||||||| || ||| |
Sbjct: 498 acatttggatgccacatttc-agaggtaaatctgactgatggcgggctgtttgggtaa-t 441

                                       
Query: 534 tttgtgggaagctcataatagcattgaa 561
           |||||||||||||||| || ||||||||
Sbjct: 440 tttgtgggaagctcattattgcattgaa 413



to top

>gb|BT019147.1| Zea mays clone Contig802.F mRNA sequence
          Length = 902

 Score =  190 bits (96), Expect = 3e-45
 Identities = 238/283 (84%), Gaps = 3/283 (1%)
 Strand = Plus / Plus

                                                                       
Query: 248 gcctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatat 307
           |||| ||||| ||||||||||||||| |||| |||||||| ||||| || ||||| ||||
Sbjct: 325 gccttacctttttcttgaactcatcccgcttttctctccaatccttggcagcttcgatat 384

                                                                       
Query: 308 ttgccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactct 367
           | || || || || ||||| |||||||| ||||||||||||||||| |  |||||||| |
Sbjct: 385 tcgctggagactcgtcatttggactagagagcatcgaaatgatgctcagaactatacttt 444

                                                                       
Query: 368 caaccgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatc 427
           ||||||| || ||   |||||||| || || || || ||||| || || |||||||| ||
Sbjct: 445 caaccgtgtgcact--ggtgtccatcgttcgcttgcaagctcataaccattgggatcttc 502

                                                                       
Query: 428 accaggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487
           ||||||||||||||||||||||||||| || || ||||| ||||||||||| ||||||||
Sbjct: 503 accaggtggatgaagaatagaaatgcaaacacgtccatcaggataaacattcggatgcca 562

                                                      
Query: 488 catttcaagaagtgaatctaactgttggagggctgttcggata 530
           ||| || |||||| ||||| |||| ||| |||||||| |||||
Sbjct: 563 catctc-agaagtaaatcttactgatggcgggctgttgggata 604



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  aatggaaaatatacagggga 115
           ||||||||||||||||||||
Sbjct: 199 aatggaaaatatacagggga 218



to top

>gb|AF032468.1|AF032468 Zea mays ubiquitin-conjugating enzyme protein E2 (ubc7) mRNA,
           complete cds
          Length = 776

 Score =  190 bits (96), Expect = 3e-45
 Identities = 238/283 (84%), Gaps = 3/283 (1%)
 Strand = Plus / Minus

                                                                       
Query: 248 gcctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatat 307
           |||| ||||| ||||||||||||||| |||| |||||||| ||||| || ||||| ||||
Sbjct: 498 gccttacctttttcttgaactcatcccgcttttctctccaatccttggcagcttcgatat 439

                                                                       
Query: 308 ttgccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactct 367
           | || || || || ||||| |||||||| ||||||||||||||||| |  |||||||| |
Sbjct: 438 tcgctggagactcgtcatttggactagagagcatcgaaatgatgctcagaactatacttt 379

                                                                       
Query: 368 caaccgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatc 427
           ||||||| || ||   |||||||| || || || || ||||| || || |||||||| ||
Sbjct: 378 caaccgtgtgcac--tggtgtccatcgttcgcttgcaagctcataaccattgggatcttc 321

                                                                       
Query: 428 accaggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487
           ||||||||||||||||||||||||||| || || ||||| ||||||||||| ||||||||
Sbjct: 320 accaggtggatgaagaatagaaatgcaaacacgtccatcaggataaacattcggatgcca 261

                                                      
Query: 488 catttcaagaagtgaatctaactgttggagggctgttcggata 530
           ||| || |||||| ||||| |||| ||| |||||||| |||||
Sbjct: 260 catctc-agaagtaaatcttactgatggcgggctgttgggata 219



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 96  aatggaaaatatacagggga 115
           ||||||||||||||||||||
Sbjct: 624 aatggaaaatatacagggga 605



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  127 bits (64), Expect = 4e-26
 Identities = 85/92 (92%)
 Strand = Plus / Plus

                                                                            
Query: 384      ggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaaga 443
                |||||||||||||||||||| ||||| || || ||||||||||||||||| |||||||||
Sbjct: 36012331 ggtgtccaacgctcactcgcaagctcataaccattgggatcatcaccaggcggatgaaga 36012390

                                                
Query: 444      atagaaatgcatacccgcccatccggataaac 475
                |||||||||||||| || ||||||||||||||
Sbjct: 36012391 atagaaatgcatacacgtccatccggataaac 36012422



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                            
Query: 295      gctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgctt 354
                ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| 
Sbjct: 36011442 gctgcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatgatgctc 36011501

                                  
Query: 355      aatactatactctcaacc 372
                |  ||||| |||||||||
Sbjct: 36011502 agaactatgctctcaacc 36011519



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 151/184 (82%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                            
Query: 111      ggggagaagtgaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctcc 170
                ||||||||||||| |||||||||||   || ||||||||| ||||||||| ||| | | |
Sbjct: 36010820 ggggagaagtgaa-ttgctagtgtcaactg-acatttggaaatcgacagccaaatcatgc 36010877

                                                                            
Query: 171      acacctgaaatggcatggctaactt-ccccggtactcccattttattcagagcatttcct 229
                |||  |||  ||| |||| |||||| |||| ||||| ||  ||| ||||||||||||| |
Sbjct: 36010878 acatgtgacgtggtatggttaactttccccagtactgccggtttcttcagagcatttctt 36010937

                                                                            
Query: 230      gggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagt 289
                | |||||||||||    ||||||||||| |||||||| ||||||  |||||||||||| |
Sbjct: 36010938 gtgatttccttacaaggcgcctaacctttttcttgaagtcatccctcttctctctccatt 36010997

                    
Query: 290      cctt 293
                ||||
Sbjct: 36010998 cctt 36011001



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 70/84 (83%), Gaps = 2/84 (2%)
 Strand = Plus / Plus

                                                                            
Query: 475      cattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggataattt 534
                |||| ||||||||||||||  || || ||||| || |||||||| ||||| |||||| ||
Sbjct: 36012506 catttggatgccacatttc-tgaggtaaatctgacagttggaggactgttaggataa-tt 36012563

                                        
Query: 535      ttgtgggaagctcataatagcatt 558
                 ||||| |||||||| || |||||
Sbjct: 36012564 ctgtggaaagctcattattgcatt 36012587



to top

>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0408C03
          Length = 141273

 Score =  127 bits (64), Expect = 4e-26
 Identities = 85/92 (92%)
 Strand = Plus / Plus

                                                                         
Query: 384   ggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaaga 443
             |||||||||||||||||||| ||||| || || ||||||||||||||||| |||||||||
Sbjct: 25056 ggtgtccaacgctcactcgcaagctcataaccattgggatcatcaccaggcggatgaaga 25115

                                             
Query: 444   atagaaatgcatacccgcccatccggataaac 475
             |||||||||||||| || ||||||||||||||
Sbjct: 25116 atagaaatgcatacacgtccatccggataaac 25147



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                         
Query: 295   gctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgctt 354
             ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| 
Sbjct: 24167 gctgcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatgatgctc 24226

                               
Query: 355   aatactatactctcaacc 372
             |  ||||| |||||||||
Sbjct: 24227 agaactatgctctcaacc 24244



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 151/184 (82%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                         
Query: 111   ggggagaagtgaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctcc 170
             ||||||||||||| |||||||||||   || ||||||||| ||||||||| ||| | | |
Sbjct: 23545 ggggagaagtgaa-ttgctagtgtcaactg-acatttggaaatcgacagccaaatcatgc 23602

                                                                         
Query: 171   acacctgaaatggcatggctaactt-ccccggtactcccattttattcagagcatttcct 229
             |||  |||  ||| |||| |||||| |||| ||||| ||  ||| ||||||||||||| |
Sbjct: 23603 acatgtgacgtggtatggttaactttccccagtactgccggtttcttcagagcatttctt 23662

                                                                         
Query: 230   gggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagt 289
             | |||||||||||    ||||||||||| |||||||| ||||||  |||||||||||| |
Sbjct: 23663 gtgatttccttacaaggcgcctaacctttttcttgaagtcatccctcttctctctccatt 23722

                 
Query: 290   cctt 293
             ||||
Sbjct: 23723 cctt 23726



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 70/84 (83%), Gaps = 2/84 (2%)
 Strand = Plus / Plus

                                                                         
Query: 475   cattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggataattt 534
             |||| ||||||||||||||  || || ||||| || |||||||| ||||| |||||| ||
Sbjct: 25231 catttggatgccacatttc-tgaggtaaatctgacagttggaggactgttaggataa-tt 25288

                                     
Query: 535   ttgtgggaagctcataatagcatt 558
              ||||| |||||||| || |||||
Sbjct: 25289 ctgtggaaagctcattattgcatt 25312



to top

>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0031D11
          Length = 138108

 Score =  127 bits (64), Expect = 4e-26
 Identities = 85/92 (92%)
 Strand = Plus / Plus

                                                                          
Query: 384    ggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaaga 443
              |||||||||||||||||||| ||||| || || ||||||||||||||||| |||||||||
Sbjct: 111009 ggtgtccaacgctcactcgcaagctcataaccattgggatcatcaccaggcggatgaaga 111068

                                              
Query: 444    atagaaatgcatacccgcccatccggataaac 475
              |||||||||||||| || ||||||||||||||
Sbjct: 111069 atagaaatgcatacacgtccatccggataaac 111100



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                          
Query: 295    gctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgctt 354
              ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| 
Sbjct: 110120 gctgcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatgatgctc 110179

                                
Query: 355    aatactatactctcaacc 372
              |  ||||| |||||||||
Sbjct: 110180 agaactatgctctcaacc 110197



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 151/184 (82%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                          
Query: 111    ggggagaagtgaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctcc 170
              ||||||||||||| |||||||||||   || ||||||||| ||||||||| ||| | | |
Sbjct: 109498 ggggagaagtgaa-ttgctagtgtcaactg-acatttggaaatcgacagccaaatcatgc 109555

                                                                          
Query: 171    acacctgaaatggcatggctaactt-ccccggtactcccattttattcagagcatttcct 229
              |||  |||  ||| |||| |||||| |||| ||||| ||  ||| ||||||||||||| |
Sbjct: 109556 acatgtgacgtggtatggttaactttccccagtactgccggtttcttcagagcatttctt 109615

                                                                          
Query: 230    gggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagt 289
              | |||||||||||    ||||||||||| |||||||| ||||||  |||||||||||| |
Sbjct: 109616 gtgatttccttacaaggcgcctaacctttttcttgaagtcatccctcttctctctccatt 109675

                  
Query: 290    cctt 293
              ||||
Sbjct: 109676 cctt 109679



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 70/84 (83%), Gaps = 2/84 (2%)
 Strand = Plus / Plus

                                                                          
Query: 475    cattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggataattt 534
              |||| ||||||||||||||  || || ||||| || |||||||| ||||| |||||| ||
Sbjct: 111184 catttggatgccacatttc-tgaggtaaatctgacagttggaggactgttaggataa-tt 111241

                                      
Query: 535    ttgtgggaagctcataatagcatt 558
               ||||| |||||||| || |||||
Sbjct: 111242 ctgtggaaagctcattattgcatt 111265



to top

>ref|NM_125320.1| Arabidopsis thaliana UBC7; ubiquitin conjugating enzyme AT5G59300
           (UBC7) mRNA, complete cds
          Length = 597

 Score =  103 bits (52), Expect = 6e-19
 Identities = 190/235 (80%), Gaps = 2/235 (0%)
 Strand = Plus / Minus

                                                                       
Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315
           |||||||||||||||||   ||| |||| ||| || || || ||||||| |||||| || 
Sbjct: 557 ttcttcttgaactcatctctcttatctcgccattctttggcagcttcaacatttgctgga 498

                                                                       
Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375
           || ||||| || |||| ||||||||| || ||||| || || |  ||||||||||| |||
Sbjct: 497 gactcatcgttaggaccagaaagcattgatatgatactcaacataatactctcaactgta 438

                                                                       
Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435
           || ||   || ||||||||||| || || ||||| || ||| | ||||||||||| || |
Sbjct: 437 tgaaca--ggagtccaacgctcgcttgcaagctcataaccgctaggatcatcaccgggag 380

                                                                  
Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccacat 490
           ||||||||||||| ||||| || || ||||| | |||||| ||||||||||||||
Sbjct: 379 gatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccacat 325



to top

>gb|AY080733.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC7
           (At5g59300) mRNA, partial cds
          Length = 852

 Score =  103 bits (52), Expect = 6e-19
 Identities = 190/235 (80%), Gaps = 2/235 (0%)
 Strand = Plus / Minus

                                                                       
Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315
           |||||||||||||||||   ||| |||| ||| || || || ||||||| |||||| || 
Sbjct: 525 ttcttcttgaactcatctctcttatctcgccattctttggcagcttcaacatttgctgga 466

                                                                       
Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375
           || ||||| || |||| ||||||||| || ||||| || || |  ||||||||||| |||
Sbjct: 465 gactcatcgttaggaccagaaagcattgatatgatactcaacataatactctcaactgta 406

                                                                       
Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435
           || ||   || ||||||||||| || || ||||| || ||| | ||||||||||| || |
Sbjct: 405 tgaaca--ggagtccaacgctcgcttgcaagctcataaccgctaggatcatcaccgggag 348

                                                                  
Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccacat 490
           ||||||||||||| ||||| || || ||||| | |||||| ||||||||||||||
Sbjct: 347 gatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccacat 293



to top

>emb|BX833817.1|CNS0A23A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL78ZH07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 740

 Score =  103 bits (52), Expect = 6e-19
 Identities = 190/235 (80%), Gaps = 2/235 (0%)
 Strand = Plus / Minus

                                                                       
Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315
           |||||||||||||||||   ||| |||| ||| || || || ||||||| |||||| || 
Sbjct: 483 ttcttcttgaactcatctctcttatctcgccattctttggcagcttcaacatttgctgga 424

                                                                       
Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375
           || ||||| || |||| ||||||||| || ||||| || || |  ||||||||||| |||
Sbjct: 423 gactcatcgttaggaccagaaagcattgatatgatactcaacataatactctcaactgta 364

                                                                       
Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435
           || ||   || ||||||||||| || || ||||| || ||| | ||||||||||| || |
Sbjct: 363 tgaaca--ggagtccaacgctcgcttgcaagctcataaccgctaggatcatcaccgggag 306

                                                                  
Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccacat 490
           ||||||||||||| ||||| || || ||||| | |||||| ||||||||||||||
Sbjct: 305 gatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccacat 251



to top

>gb|BT005798.1| Arabidopsis thaliana clone C105469 putative E2,
           ubiquitin-conjugating enzyme UBC7 (At5g59300) mRNA,
           complete cds
          Length = 643

 Score =  103 bits (52), Expect = 6e-19
 Identities = 190/235 (80%), Gaps = 2/235 (0%)
 Strand = Plus / Minus

                                                                       
Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315
           |||||||||||||||||   ||| |||| ||| || || || ||||||| |||||| || 
Sbjct: 572 ttcttcttgaactcatctctcttatctcgccattctttggcagcttcaacatttgctgga 513

                                                                       
Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375
           || ||||| || |||| ||||||||| || ||||| || || |  ||||||||||| |||
Sbjct: 512 gactcatcgttaggaccagaaagcattgatatgatactcaacataatactctcaactgta 453

                                                                       
Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435
           || ||   || ||||||||||| || || ||||| || ||| | ||||||||||| || |
Sbjct: 452 tgaaca--ggagtccaacgctcgcttgcaagctcataaccgctaggatcatcaccgggag 395

                                                                  
Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccacat 490
           ||||||||||||| ||||| || || ||||| | |||||| ||||||||||||||
Sbjct: 394 gatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccacat 340



to top

>ref|NM_115396.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT3G55380 mRNA, complete cds
          Length = 883

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 171/211 (81%), Gaps = 2/211 (0%)
 Strand = Plus / Minus

                                                                       
Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339
           |||||||| |||||||| ||||| | ||| || ||||| ||||| || ||||  || |||
Sbjct: 541 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 482

                                                                       
Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399
           ||||| ||||| || || || || || || |||||||||||  ||||  |||||| ||| 
Sbjct: 481 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 424

                                                                       
Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459
             || ||||||||||| |  |||||||||||||| |||||||||||||||||||| ||  
Sbjct: 423 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 364

                                          
Query: 460 gcccatccggataaacattaggatgccacat 490
             ||||| | |||||||||||||||||||||
Sbjct: 363 ttccatcagaataaacattaggatgccacat 333



to top

>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05,
             complete sequence
          Length = 163130

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 384   ggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaaga 443
             |||||||| || || ||||| ||||| || ||||||||||| || |||||||||||||| 
Sbjct: 62927 ggtgtccaccgttcgctcgcaagctcataaccgttgggatcttcgccaggtggatgaagg 62868

                                             
Query: 444   atagaaatgcatacccgcccatccggataaac 475
             |||||||||||||| |||||||| ||||||||
Sbjct: 62867 atagaaatgcatacgcgcccatcaggataaac 62836



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 298   gcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgcttaat 357
             |||||||||||||| || || |||||||| |||||||| ||||||||||||||||| |  
Sbjct: 63532 gcttcaatatttgctggagactcatcatttggactagagagcatcgaaatgatgctcaga 63473

                            
Query: 358   actatactctcaacc 372
             |||||||| ||||||
Sbjct: 63472 actatactttcaacc 63458



to top

>gb|AY117262.1| Arabidopsis thaliana putative E2 ubiquitin-conjugating enzyme UBC14
           (At3g55380) mRNA, complete cds
          Length = 535

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 171/211 (81%), Gaps = 2/211 (0%)
 Strand = Plus / Minus

                                                                       
Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339
           |||||||| |||||||| ||||| | ||| || ||||| ||||| || ||||  || |||
Sbjct: 440 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 381

                                                                       
Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399
           ||||| ||||| || || || || || || |||||||||||  ||||  |||||| ||| 
Sbjct: 380 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 323

                                                                       
Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459
             || ||||||||||| |  |||||||||||||| |||||||||||||||||||| ||  
Sbjct: 322 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 263

                                          
Query: 460 gcccatccggataaacattaggatgccacat 490
             ||||| | |||||||||||||||||||||
Sbjct: 262 ttccatcagaataaacattaggatgccacat 232



to top

>emb|X72625.1|ATUCEE2A A.thaliana UbcAT3 mRNA for ubiquitin conjugating enzyme E2
          Length = 887

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 171/211 (81%), Gaps = 2/211 (0%)
 Strand = Plus / Minus

                                                                       
Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339
           |||||||| |||||||| ||||| | ||| || ||||| ||||| || ||||  || |||
Sbjct: 535 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 476

                                                                       
Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399
           ||||| ||||| || || || || || || |||||||||||  ||||  |||||| ||| 
Sbjct: 475 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 418

                                                                       
Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459
             || ||||||||||| |  |||||||||||||| |||||||||||||||||||| ||  
Sbjct: 417 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 358

                                          
Query: 460 gcccatccggataaacattaggatgccacat 490
             ||||| | |||||||||||||||||||||
Sbjct: 357 ttccatcagaataaacattaggatgccacat 327



to top

>gb|AY045883.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme
           UBC14 (At3g55380) mRNA, complete cds
          Length = 898

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 171/211 (81%), Gaps = 2/211 (0%)
 Strand = Plus / Minus

                                                                       
Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339
           |||||||| |||||||| ||||| | ||| || ||||| ||||| || ||||  || |||
Sbjct: 549 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 490

                                                                       
Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399
           ||||| ||||| || || || || || || |||||||||||  ||||  |||||| ||| 
Sbjct: 489 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 432

                                                                       
Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459
             || ||||||||||| |  |||||||||||||| |||||||||||||||||||| ||  
Sbjct: 431 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 372

                                          
Query: 460 gcccatccggataaacattaggatgccacat 490
             ||||| | |||||||||||||||||||||
Sbjct: 371 ttccatcagaataaacattaggatgccacat 341



to top

>gb|AF462205.1| Narcissus pseudonarcissus putative ubiquitin conjugating enzyme
           mRNA, partial cds
          Length = 498

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 216/271 (79%), Gaps = 2/271 (0%)
 Strand = Plus / Minus

                                                                       
Query: 220 agcatttcctgggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttc 279
           ||||||||||| |||||||| |||   || || || ||||||||||| || ||| || | 
Sbjct: 290 agcatttcctgagatttcctgacgatgcggcttactttcttcttgaaatcgtcccgccta 231

                                                                       
Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339
           |||||||| || || || |||||||||||||| || ||||||||||| ||||| ||||||
Sbjct: 230 tctctccattctttggcggcttcaatatttgcaggagattcatcattgggactggaaagc 171

                                                                       
Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399
           || || || || || || |  || |||||||||||||| ||   ||||||||||| ||||
Sbjct: 170 atggatataatactcaaaagaatgctctcaaccgtatgcac--aggtgtccaacgttcac 113

                                                                       
Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459
           | || || || || ||  | |||||||| |||||||  || || || || ||||| || |
Sbjct: 112 ttgcaagttcatagccacttggatcatctccaggtgcgtgcaggattgagatgcaaacac 53

                                          
Query: 460 gcccatccggataaacattaggatgccacat 490
           ||||||| ||||| ||||| |||||||||||
Sbjct: 52  gcccatcgggatacacatttggatgccacat 22



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                            
Query: 384      ggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaaga 443
                |||||||| || || ||||| ||||| || ||||||||||| || |||||||||||||| 
Sbjct: 22473520 ggtgtccaccgttcgctcgcaagctcataaccgttgggatcttcgccaggtggatgaagg 22473461

                                                
Query: 444      atagaaatgcatacccgcccatccggataaac 475
                |||||||||||||| |||||||| ||||||||
Sbjct: 22473460 atagaaatgcatacgcgcccatcaggataaac 22473429



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                            
Query: 298      gcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgcttaat 357
                |||||||||||||| || || |||||||| |||||||| ||||||||||||||||| |  
Sbjct: 22474125 gcttcaatatttgctggagactcatcatttggactagagagcatcgaaatgatgctcaga 22474066

                               
Query: 358      actatactctcaacc 372
                |||||||| ||||||
Sbjct: 22474065 actatactttcaacc 22474051



to top

>emb|BX825254.1|CNS0A53C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL23ZB03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 842

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 171/211 (81%), Gaps = 2/211 (0%)
 Strand = Plus / Minus

                                                                       
Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339
           |||||||| |||||||| ||||| | ||| || ||||| ||||| || ||||  || |||
Sbjct: 520 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 461

                                                                       
Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399
           ||||| ||||| || || || || || || |||||||||||  ||||  |||||| ||| 
Sbjct: 460 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 403

                                                                       
Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459
             || ||||||||||| |  |||||||||||||| |||||||||||||||||||| ||  
Sbjct: 402 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 343

                                          
Query: 460 gcccatccggataaacattaggatgccacat 490
             ||||| | |||||||||||||||||||||
Sbjct: 342 ttccatcagaataaacattaggatgccacat 312



to top

>gb|AY086490.1| Arabidopsis thaliana clone 25382 mRNA, complete sequence
          Length = 785

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 171/211 (81%), Gaps = 2/211 (0%)
 Strand = Plus / Minus

                                                                       
Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339
           |||||||| |||||||| ||||| | ||| || ||||| ||||| || ||||  || |||
Sbjct: 465 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 406

                                                                       
Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399
           ||||| ||||| || || || || || || |||||||||||  ||||  |||||| ||| 
Sbjct: 405 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 348

                                                                       
Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459
             || ||||||||||| |  |||||||||||||| |||||||||||||||||||| ||  
Sbjct: 347 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 288

                                          
Query: 460 gcccatccggataaacattaggatgccacat 490
             ||||| | |||||||||||||||||||||
Sbjct: 287 ttccatcagaataaacattaggatgccacat 257



to top

>gb|DQ027028.1| Arabidopsis thaliana ubiquitinating enzyme (At3g55380) mRNA,
           complete cds
          Length = 504

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 171/211 (81%), Gaps = 2/211 (0%)
 Strand = Plus / Minus

                                                                       
Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339
           |||||||| |||||||| ||||| | ||| || ||||| ||||| || ||||  || |||
Sbjct: 440 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 381

                                                                       
Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399
           ||||| ||||| || || || || || || |||||||||||  ||||  |||||| ||| 
Sbjct: 380 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 323

                                                                       
Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459
             || ||||||||||| |  |||||||||||||| |||||||||||||||||||| ||  
Sbjct: 322 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 263

                                          
Query: 460 gcccatccggataaacattaggatgccacat 490
             ||||| | |||||||||||||||||||||
Sbjct: 262 ttccatcagaataaacattaggatgccacat 232



to top

>emb|BX833254.1|CNS0A238 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL41ZA06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 816

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 193/241 (80%), Gaps = 2/241 (0%)
 Strand = Plus / Minus

                                                                       
Query: 250 ctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatattt 309
           ||||| |||||||||||||||||   ||  |||| ||| || || || ||||||| ||||
Sbjct: 529 ctaactttcttcttgaactcatctctctcatctcgccattctttggcagcttcaacattt 470

                                                                       
Query: 310 gccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctca 369
           || || || ||||| || |||| ||||||||| || ||||| || || |  |||||||||
Sbjct: 469 gctggagactcatcgttaggaccagaaagcattgatatgatactcaacataatactctca 410

                                                                       
Query: 370 accgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcac 429
           || ||||| ||   || || |||||||| || || ||||| || ||| | ||||||||||
Sbjct: 409 actgtatgaaca--ggagttcaacgctcgcttgcaagctcataaccgctaggatcatcac 352

                                                                       
Query: 430 caggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccaca 489
           | || |||||||||||||| ||||| || || ||||| | |||||| |||||||||||||
Sbjct: 351 cgggaggatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccaca 292

            
Query: 490 t 490
           |
Sbjct: 291 t 291



to top

>ref|NM_114513.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT3G46460 mRNA, complete cds
          Length = 857

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 185/232 (79%), Gaps = 2/232 (0%)
 Strand = Plus / Minus

                                                                       
Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315
           |||||||||||||||||   |||||||||||| || || || || ||||  ||||| || 
Sbjct: 598 ttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctgga 539

                                                                       
Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375
           ||||| || || |||| ||| ||||| || || || || || |  ||||||||||| || 
Sbjct: 538 gattcgtcgttgggaccagagagcattgatataatactcaacatgatactctcaactgtg 479

                                                                       
Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435
           || ||   || |||||||||||||| || ||||| |||||  | |||||||||||||| |
Sbjct: 478 tgaac--aggcgtccaacgctcacttgcaagctcatatccacttggatcatcaccaggag 421

                                                               
Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487
           |||| |||||||| || || || || ||||| |||||||| |||||||||||
Sbjct: 420 gatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgcca 369



to top

>gb|AY094040.1| Arabidopsis thaliana AT3g46460/F18L15_180 mRNA, complete cds
          Length = 501

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 185/232 (79%), Gaps = 2/232 (0%)
 Strand = Plus / Minus

                                                                       
Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315
           |||||||||||||||||   |||||||||||| || || || || ||||  ||||| || 
Sbjct: 461 ttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctgga 402

                                                                       
Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375
           ||||| || || |||| ||| ||||| || || || || || |  ||||||||||| || 
Sbjct: 401 gattcgtcgttgggaccagagagcattgatataatactcaacatgatactctcaactgtg 342

                                                                       
Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435
           || ||   || |||||||||||||| || ||||| |||||  | |||||||||||||| |
Sbjct: 341 tgaac--aggcgtccaacgctcacttgcaagctcatatccacttggatcatcaccaggag 284

                                                               
Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487
           |||| |||||||| || || || || ||||| |||||||| |||||||||||
Sbjct: 283 gatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgcca 232



to top

>gb|AY050368.1| Arabidopsis thaliana AT3g46460/F18L15_180 mRNA, complete cds
          Length = 780

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 185/232 (79%), Gaps = 2/232 (0%)
 Strand = Plus / Minus

                                                                       
Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315
           |||||||||||||||||   |||||||||||| || || || || ||||  ||||| || 
Sbjct: 598 ttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctgga 539

                                                                       
Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375
           ||||| || || |||| ||| ||||| || || || || || |  ||||||||||| || 
Sbjct: 538 gattcgtcgttgggaccagagagcattgatataatactcaacatgatactctcaactgtg 479

                                                                       
Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435
           || ||   || |||||||||||||| || ||||| |||||  | |||||||||||||| |
Sbjct: 478 tgaac--aggcgtccaacgctcacttgcaagctcatatccacttggatcatcaccaggag 421

                                                               
Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487
           |||| |||||||| || || || || ||||| |||||||| |||||||||||
Sbjct: 420 gatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgcca 369



to top

>gb|DQ027027.1| Arabidopsis thaliana ubiquitinating enzyme (At3g46460) mRNA,
           complete cds
          Length = 501

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 185/232 (79%), Gaps = 2/232 (0%)
 Strand = Plus / Minus

                                                                       
Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315
           |||||||||||||||||   |||||||||||| || || || || ||||  ||||| || 
Sbjct: 461 ttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctgga 402

                                                                       
Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375
           ||||| || || |||| ||| ||||| || || || || || |  ||||||||||| || 
Sbjct: 401 gattcgtcgttgggaccagagagcattgatataatactcaacatgatactctcaactgtg 342

                                                                       
Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435
           || ||   || |||||||||||||| || ||||| |||||  | |||||||||||||| |
Sbjct: 341 tgaac--aggcgtccaacgctcacttgcaagctcatatccacttggatcatcaccaggag 284

                                                               
Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487
           |||| |||||||| || || || || ||||| |||||||| |||||||||||
Sbjct: 283 gatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgcca 232



to top

>gb|DQ284482.1| Solanum tuberosum clone 178D03 ubiquitin-conjugating protein
           13-like mRNA, complete cds
          Length = 820

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 137/169 (81%), Gaps = 2/169 (1%)
 Strand = Plus / Minus

                                                                       
Query: 319 tcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgtatgg 378
           |||||||| || || |||||||| || ||||||||||| | ||||||||| ||||| |||
Sbjct: 483 tcatcattagggcttgaaagcatggatatgatgcttaaaattatactctccaccgtgtgg 424

                                                                       
Query: 379 acctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggat 438
           ||   || | |||||||||||| ||   ||| || || || |||||||||||||| || |
Sbjct: 423 aca--ggagaccaacgctcactagcatactcatagccatttggatcatcaccaggagggt 366

                                                            
Query: 439 gaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487
           ||||||| || ||||| |||  |||||| |  |||||||||||||||||
Sbjct: 365 gaagaattgagatgcaaaccttcccatcagagtaaacattaggatgcca 317



to top

>gb|DQ284455.1| Solanum tuberosum clone 007A03 putative E2 ubiquitin-conjugating
           protein UBC7-like mRNA, complete cds
          Length = 783

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 137/169 (81%), Gaps = 2/169 (1%)
 Strand = Plus / Minus

                                                                       
Query: 319 tcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgtatgg 378
           |||||||| || || |||||||| || ||||||||||| | ||||||||| ||||| |||
Sbjct: 465 tcatcattagggcttgaaagcatggatatgatgcttaaaattatactctccaccgtgtgg 406

                                                                       
Query: 379 acctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggat 438
           ||   || | |||||||||||| ||   ||| || || || ||||||||||||||||| |
Sbjct: 405 aca--ggagaccaacgctcactagcatactcatagccatttggatcatcaccaggtgggt 348

                                                            
Query: 439 gaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487
           ||||||| || ||||| |||  |||||| |  || ||||||||||||||
Sbjct: 347 gaagaattgagatgcaaaccttcccatcagagtacacattaggatgcca 299



to top

>gb|DQ252513.1| Solanum tuberosum clone 089D04 ubiquitin-conjugating enzyme E2
           7-like mRNA, complete cds
          Length = 807

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 137/169 (81%), Gaps = 2/169 (1%)
 Strand = Plus / Minus

                                                                       
Query: 319 tcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgtatgg 378
           |||||||| || || |||||||| || ||||||||||| | ||||||||| ||||| |||
Sbjct: 485 tcatcattagggcttgaaagcatggatatgatgcttaaaattatactctccaccgtgtgg 426

                                                                       
Query: 379 acctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggat 438
           ||   || | |||||||||||| ||   ||| || || || |||||||||||||| || |
Sbjct: 425 aca--ggagaccaacgctcactagcatactcatagccatttggatcatcaccaggagggt 368

                                                            
Query: 439 gaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487
           ||||||| || ||||| |||  |||||| |  |||||||||||||||||
Sbjct: 367 gaagaattgagatgcaaaccttcccatcagagtaaacattaggatgcca 319



to top

>emb|BX825758.1|CNS0A66U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL60ZE06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 799

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 184/232 (79%), Gaps = 2/232 (0%)
 Strand = Plus / Minus

                                                                       
Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315
           |||||||||||||||||   |||||||||||| || || || || ||||  ||||| || 
Sbjct: 586 ttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctgga 527

                                                                       
Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375
           ||||| || || |||| ||||||||| || || || || || |  ||||||||||| || 
Sbjct: 526 gattcgtcgttgggaccagaaagcattgatataatactcaacatgatactctcaactgtt 467

                                                                       
Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435
           |  ||   || |||||||||||| | || ||||| |||||  | |||||||||||||| |
Sbjct: 466 ttaac--aggcgtccaacgctcatttgcaagctcatatccacttggatcatcaccaggag 409

                                                               
Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487
           |||| |||||||| || || || || ||||| |||||||| |||||||||||
Sbjct: 408 gatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgcca 357



to top

>emb|BX842105.1|CNS09YES Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB14ZD06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 840

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 184/232 (79%), Gaps = 2/232 (0%)
 Strand = Plus / Minus

                                                                       
Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315
           |||||||||||||||||   |||||||||||| || || || || ||||  ||||| || 
Sbjct: 581 ttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctgga 522

                                                                       
Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375
           ||||| || || |||| ||| ||||| || || || || || |  ||||||||||| || 
Sbjct: 521 gattcgtcgttgggaccagagagcattgatataatactcaacatgatactctcaactgtg 462

                                                                       
Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435
           || ||   || |||||||||| ||| || ||||| |||||  | |||||||||||||| |
Sbjct: 461 tgaac--aggcgtccaacgctgacttgcaagctcatatccacttggatcatcaccaggag 404

                                                               
Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487
           |||| |||||||| || || || || ||||| |||||||| |||||||||||
Sbjct: 403 gatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgcca 352



to top

>gb|U33759.1|ATU33759 Arabidopsis ubiquitin conjugating enzyme E2 (UBC14) gene, complete
            cds
          Length = 2107

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 405  agctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgca 454
            ||||||||||| |  |||||||||||||| ||||||||||||||||||||
Sbjct: 1083 agctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 1034



to top

>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16
          Length = 103240

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 405   agctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgca 454
             ||||||||||| |  |||||||||||||| ||||||||||||||||||||
Sbjct: 14764 agctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 14715



to top

>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15
          Length = 100328

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                         
Query: 387   gtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaata 446
             |||||||||||||| || ||||| |||||  | |||||||||||||| ||||| ||||||
Sbjct: 82714 gtccaacgctcacttgcaagctcatatccacttggatcatcaccaggaggatgtagaata 82773

                                          
Query: 447   gaaatgcatacccgcccatccggataaac 475
             || || || || || ||||| ||||||||
Sbjct: 82774 gatatacaaacgcggccatcgggataaac 82802



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 256   ttcttcttgaactcatcctgcttctctctcca 287
             |||||||||||||||||   ||||||||||||
Sbjct: 82346 ttcttcttgaactcatctctcttctctctcca 82377



to top

>gb|U33758.1|ATU33758 Arabidopsis ubiquitin conjugating enzyme E2 (UBC13) gene, complete
            cds
          Length = 2209

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                        
Query: 387  gtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaata 446
            |||||||||||||| || ||||| |||||  | |||||||||||||| ||||| ||||||
Sbjct: 1141 gtccaacgctcacttgcaagctcatatccacttggatcatcaccaggaggatgtagaata 1082

                                         
Query: 447  gaaatgcatacccgcccatccggataaac 475
            || || || || || ||||| ||||||||
Sbjct: 1081 gatatacaaacgcggccatcgggataaac 1053



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 256  ttcttcttgaactcatcctgcttctctctcca 287
            |||||||||||||||||   ||||||||||||
Sbjct: 1509 ttcttcttgaactcatctctcttctctctcca 1478



to top

>ref|XM_824383.1| Trypanosoma brucei TREU927 ubiquitin-conjugating enzyme E2
           (Tb11.01.5790) partial mRNA
          Length = 744

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                   
Query: 432 ggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487
           ||||||||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 272 ggtggatgaagaatagaaatgcacacacgaccatcgggataaacattcgggtgcca 217



to top

>dbj|AK102646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100I12, full
            insert sequence
          Length = 2666

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 250  ctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatattt 309
            |||||||| |||||||| || |||  ||| |||||||| ||||| || ||||||||||||
Sbjct: 2332 ctaacctttttcttgaaatcgtccctcttttctctccaatccttagccgcttcaatattt 2273

                                   
Query: 310  gccggtgattcatcattcggact 332
            || || || |||||||| |||||
Sbjct: 2272 gctggagactcatcatttggact 2250



to top

>ref|XM_661133.1| Cryptosporidium hominis TU502 ubiquitin conjugating enzyme E2
           (Chro.10052) partial mRNA
          Length = 288

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 429 ccaggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccac 488
           ||||| |||||||| ||||| ||||||||    ||||| ||||| |||||||||||||||
Sbjct: 80  ccaggaggatgaagtatagatatgcatacatttccatcaggatatacattaggatgccac 21

                
Query: 489 atttc 493
           |||||
Sbjct: 20  atttc 16



to top

>ref|XM_627901.1| Cryptosporidium parvum Iowa II ubiquitin conjugating enzyme
           (cgd1_410), partial mRNA
          Length = 471

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 429 ccaggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccac 488
           ||||| |||||||| ||||| ||||||||    ||||| ||||| |||||||||||||||
Sbjct: 263 ccaggaggatgaagtatagatatgcatacatttccatcaggatatacattaggatgccac 204

                
Query: 489 atttc 493
           |||||
Sbjct: 203 atttc 199



to top

>dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC17
          Length = 75803

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                         
Query: 387   gtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaata 446
             ||||||||||| || || ||||| || ||| | ||||||||||| || ||||||||||||
Sbjct: 59558 gtccaacgctcgcttgcaagctcataaccgctaggatcatcaccgggaggatgaagaata 59617

                                          
Query: 447   gaaatgcatacccgcccatccggataaac 475
             || ||||| || || ||||| | ||||||
Sbjct: 59618 gatatgcaaacacgaccatcagaataaac 59646



to top

>gb|U33757.1|ATU33757 Arabidopsis thaliana ubiquitin conjugating enzyme E2 (UBC7) gene,
            complete cds
          Length = 2705

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 387  gtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaata 446
            ||||||||||| || || ||||| || ||| | ||||||||||| || ||||||||||||
Sbjct: 1576 gtccaacgctcgcttgcaagctcataaccgctaggatcatcaccgggaggatgaagaata 1517

                                         
Query: 447  gaaatgcatacccgcccatccggataaac 475
            || ||||| || || ||||| | ||||||
Sbjct: 1516 gatatgcaaacacgaccatcagaataaac 1488



to top

>ref|XM_618072.2| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2R
           2, transcript variant 1 (LOC537885), mRNA
          Length = 1269

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||||||||||||||| |||||||||||
Sbjct: 126 caggtggatgaagaattgaaatgcatac 99



to top

>ref|XM_872923.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2R
           2, transcript variant 3 (LOC537885), mRNA
          Length = 1126

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||||||||||||||| |||||||||||
Sbjct: 118 caggtggatgaagaattgaaatgcatac 91



to top

>ref|XM_843428.1| PREDICTED: Canis familiaris similar to ubiquitin-conjugating enzyme
           E2R 2 (LOC612749), mRNA
          Length = 1487

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||||||||||||||| |||||||||||
Sbjct: 310 caggtggatgaagaatcgaaatgcatac 283



to top

>ref|XM_718691.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03603)
           partial mRNA
          Length = 234

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 462 ccatccggataaacattaggatgccacatttc 493
           ||||| ||||||||||| ||||||||||||||
Sbjct: 185 ccatcaggataaacatttggatgccacatttc 154



to top

>ref|XM_661132.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.10053)
           partial mRNA
          Length = 276

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 462 ccatccggataaacattaggatgccacatttc 493
           ||||| ||||| ||||||||||||||||||||
Sbjct: 13  ccatcaggatatacattaggatgccacatttc 44



to top

>gb|AY261360.1| African swine fever virus isolate Kenya 1950, complete genome
          Length = 193886

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                 
Query: 444    atagaaatgcatacccgcccatccggataaacattaggatgccacatttca 494
              ||||| |||||||  | |||||| ||||| | |||||||||||||||||||
Sbjct: 178555 atagagatgcatagtctcccatcaggatagatattaggatgccacatttca 178605



to top

>ref|XM_673209.1| Plasmodium berghei strain ANKA ubiquitin conjugating enzyme E2,
           (PB000442.00.0) partial mRNA
          Length = 489

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 468 ggataaacattaggatgccacatttc 493
           ||||||||||| ||||||||||||||
Sbjct: 248 ggataaacatttggatgccacatttc 223



to top

>gb|BC101493.1| Homo sapiens endoplasmic reticulum protein 29, transcript variant
           1, mRNA (cDNA clone MGC:126542 IMAGE:8068999), complete
           cds
          Length = 881

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 280 cttgaactcatcctgcttctc 260



to top

>gb|BC101495.1| Homo sapiens endoplasmic reticulum protein 29, transcript variant
           1, mRNA (cDNA clone MGC:126544 IMAGE:8069001), complete
           cds
          Length = 875

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 280 cttgaactcatcctgcttctc 260



to top

>ref|NM_006817.3| Homo sapiens endoplasmic reticulum protein 29 (ERP29), transcript
           variant 1, mRNA
          Length = 1472

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 340 cttgaactcatcctgcttctc 320



to top

>gb|M77121.1|ASVI226R African swine fever virus I226R protein, put. transcription factor
            (I243L), I73R protein, I329L protein, I78R protein, put.
            ubiquitin conjugation protein (I215L), I177L protein,
            I196L protein (I196L) genes, complete cds
          Length = 6004

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 462  ccatccggataaacattaggatgccacatttca 494
            ||||| || |||| |||||||||||||||||||
Sbjct: 4053 ccatcagggtaaatattaggatgccacatttca 4085



to top

>ref|XM_864044.1| PREDICTED: Bos taurus similar to endoplasmic reticulum protein 29
           precursor (LOC613357), mRNA
          Length = 1217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 347 cttgaactcatcctgcttctc 327



to top

>gb|AY261366.1| African swine fever virus isolate Warthog, complete genome
          Length = 186528

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 462    ccatccggataaacattaggatgccacatttca 494
              ||||| || |||| |||||||||||||||||||
Sbjct: 170822 ccatcagggtaaatattaggatgccacatttca 170854



to top

>gb|AY261365.1| African swine fever virus isolate Warmbaths, complete genome
          Length = 190773

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 462    ccatccggataaacattaggatgccacatttca 494
              ||||| || |||| |||||||||||||||||||
Sbjct: 174117 ccatcagggtaaatattaggatgccacatttca 174149



to top

>gb|AC146033.2| Pan troglodytes BAC clone RP43-14B18 from 7, complete sequence
          Length = 170094

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 272    cctgcttctctctccagtcct 292
              |||||||||||||||||||||
Sbjct: 156936 cctgcttctctctccagtcct 156956



to top

>gb|AC124544.4| Mus musculus BAC clone RP23-266K17 from 8, complete sequence
          Length = 150266

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 266   actcatcctgcttctctctcc 286
             |||||||||||||||||||||
Sbjct: 62666 actcatcctgcttctctctcc 62686



to top

>gb|AC006463.4| Homo sapiens BAC clone RP11-395G17 from 7, complete sequence
          Length = 120984

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 272   cctgcttctctctccagtcct 292
             |||||||||||||||||||||
Sbjct: 12788 cctgcttctctctccagtcct 12768



to top

>gb|DQ148252.1| Macaca mulatta clone sl1_e22_t7_490 ERp28 protein (C12orf8) mRNA,
           partial cds
          Length = 479

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 31  cttgaactcatcctgcttctc 11



to top

>gb|DQ148154.1| Macaca mulatta clone sl1_a03_t7_369 endoplasmic reticulum lumenal
           protein ERP28 (ERP28) mRNA, partial cds
          Length = 476

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 31  cttgaactcatcctgcttctc 11



to top

>emb|X94910.1|HSERP28 Homo sapiens mRNA for ERp28 protein
          Length = 892

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 233 cttgaactcatcctgcttctc 213



to top

>emb|AL445065.1|TACID3 Thermoplasma acidophilum complete genome; segment 3/5
          Length = 316900

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 250   ctaaccttcttcttgaactcatcct 274
             |||||||||||||||| ||||||||
Sbjct: 45469 ctaaccttcttcttgatctcatcct 45493



to top

>emb|CR625433.1| full-length cDNA clone CS0DK008YM02 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1203

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 333 cttgaactcatcctgcttctc 313



to top

>emb|CR623789.1| full-length cDNA clone CS0DI079YL05 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1375

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 247 cttgaactcatcctgcttctc 227



to top

>emb|CR617833.1| full-length cDNA clone CS0DL010YA17 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1139

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 242 cttgaactcatcctgcttctc 222



to top

>emb|CR617687.1| full-length cDNA clone CS0DL001YK02 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1111

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 229 cttgaactcatcctgcttctc 209



to top

>emb|CR611287.1| full-length cDNA clone CS0DI072YH08 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1119

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 247 cttgaactcatcctgcttctc 227



to top

>emb|CR604444.1| full-length cDNA clone CS0DI043YB01 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1111

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 229 cttgaactcatcctgcttctc 209



to top

>emb|CR603906.1| full-length cDNA clone CS0DH002YC21 of T cells (Jurkat cell line)
           of Homo sapiens (human)
          Length = 1110

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 229 cttgaactcatcctgcttctc 209



to top

>emb|CR602804.1| full-length cDNA clone CS0DC009YD12 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1119

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 229 cttgaactcatcctgcttctc 209



to top

>emb|CR602432.1| full-length cDNA clone CS0DF036YH02 of Fetal brain of Homo sapiens
           (human)
          Length = 1062

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 229 cttgaactcatcctgcttctc 209



to top

>emb|CR600542.1| full-length cDNA clone CS0DI006YC12 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1152

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 292 cttgaactcatcctgcttctc 272



to top

>emb|CR594614.1| full-length cDNA clone CS0DJ008YF23 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1058

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 219 cttgaactcatcctgcttctc 199



to top

>gb|AC069307.7| Homo sapiens BAC clone RP11-738E22 from 4, complete sequence
          Length = 203474

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 278   tctctctccagtcctttgctg 298
             |||||||||||||||||||||
Sbjct: 51863 tctctctccagtcctttgctg 51883



to top

>emb|CR541667.1| Homo sapiens full open reading frame cDNA clone RZPDo834E0727D for
           gene C12orf8, chromosome 12 open reading frame 8;
           complete cds, incl. stopcodon
          Length = 786

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 261 cttgaactcatcctgcttctc 281
           |||||||||||||||||||||
Sbjct: 222 cttgaactcatcctgcttctc 202



to top

>gb|AC073575.30| Homo sapiens 12 PAC RP1-267L14 (Roswell Park Cancer Institute Human PAC
              Library) complete sequence
          Length = 173718

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 261    cttgaactcatcctgcttctc 281
              |||||||||||||||||||||
Sbjct: 161250 cttgaactcatcctgcttctc 161270



to top

>emb|AL928641.14| Mouse DNA sequence from clone RP23-272N6 on chromosome 2, complete
             sequence
          Length = 153467

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   gagaagtgaaattgctagtgt 134
             |||||||||||||||||||||
Sbjct: 91327 gagaagtgaaattgctagtgt 91307



to top

>gb|AC133195.4| Mus musculus BAC clone RP23-133F6 from 8, complete sequence
          Length = 214318

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 266  actcatcctgcttctctctcc 286
            |||||||||||||||||||||
Sbjct: 5145 actcatcctgcttctctctcc 5165



to top

>gb|U18466.1|ASU18466 African swine fever virus, complete genome
          Length = 170101

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 462    ccatccggataaacattaggatgccacatttca 494
              ||||| || |||| |||||||||||||||||||
Sbjct: 157367 ccatcagggtaaatattaggatgccacatttca 157399



to top

>ref|XM_520535.1| PREDICTED: Pan troglodytes similar to ubiquitin-conjugating enzyme
           E2-32k (LOC465050), mRNA
          Length = 1231

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 745 caggcggatgaagaatcgaaatgcatac 718



to top

>ref|XM_422648.1| PREDICTED: Gallus gallus similar to ubiquitin-conjugating enzyme
           E2G 2; ubiquitin-conjugating enzyme 7 homolog
           (LOC424837), mRNA
          Length = 667

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 407 ctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgca 454
           |||||||||  |||||||||| ||||| |  ||||||||||| |||||
Sbjct: 399 ctcgtatcccatgggatcatccccaggagcgtgaagaatagagatgca 352



to top

>ref|XM_864424.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2G 1
           (UBC7 homolog, C. elegans), transcript variant 2
           (LOC613676), mRNA
          Length = 2063

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 tgaagaatagaaatgcatac 457
           ||||||||||||||||||||
Sbjct: 639 tgaagaatagaaatgcatac 620



to top

>ref|XM_872974.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2G 1
           (UBC7 homolog, C. elegans), transcript variant 5
           (LOC613676), mRNA
          Length = 1806

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 tgaagaatagaaatgcatac 457
           ||||||||||||||||||||
Sbjct: 382 tgaagaatagaaatgcatac 363



to top

>ref|XM_872892.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2G 1
           (UBC7 homolog, C. elegans), transcript variant 4
           (LOC613676), mRNA
          Length = 1619

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 tgaagaatagaaatgcatac 457
           ||||||||||||||||||||
Sbjct: 195 tgaagaatagaaatgcatac 176



to top

>ref|XM_872790.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2G 1
           (UBC7 homolog, C. elegans), transcript variant 3
           (LOC613676), mRNA
          Length = 1916

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 tgaagaatagaaatgcatac 457
           ||||||||||||||||||||
Sbjct: 492 tgaagaatagaaatgcatac 473



to top

>gb|BC004862.2| Homo sapiens ubiquitin-conjugating enzyme E2R 2, mRNA (cDNA clone
           MGC:10481 IMAGE:3838157), complete cds
          Length = 1345

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 482 caggcggatgaagaatcgaaatgcatac 455



to top

>ref|NM_017811.3| Homo sapiens ubiquitin-conjugating enzyme E2R 2 (UBE2R2), mRNA
          Length = 4457

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 875 caggcggatgaagaatcgaaatgcatac 848



to top

>gb|AY261364.1| African swine fever virus isolate Tengani 62, complete genome
          Length = 185689

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 471    taaacattaggatgccacatttca 494
              |||| |||||||||||||||||||
Sbjct: 169508 taaatattaggatgccacatttca 169531



to top

>ref|XM_001002125.1| PREDICTED: Mus musculus ubiquitin-conjugating enzyme E2R 2
           (Ube2r2), mRNA
          Length = 3123

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 151 caggcggatgaagaattgaaatgcatac 124



to top

>ref|XM_849513.1| PREDICTED: Canis familiaris similar to ubiquitin-conjugating enzyme
           E2R 2 (LOC611799), mRNA
          Length = 3117

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 532 caggcggatgaagaatcgaaatgcatac 505



to top

>gb|BC028294.1| Homo sapiens mRNA similar to keratin 1 (epidermolytic
           hyperkeratosis) (cDNA clone IMAGE:4779138)
          Length = 3114

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 379 caggcggatgaagaatcgaaatgcatac 352



to top

>emb|AL732583.5| Human DNA sequence from clone XX-111B on chromosome 1 Contains a novel
             gene (KIAA1720) and a CpG island, complete sequence
          Length = 24695

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   tgcttctctctccagtcctt 293
             ||||||||||||||||||||
Sbjct: 15972 tgcttctctctccagtcctt 15953



to top

>emb|AL139113.21| Human DNA sequence from clone RP11-176F3 on chromosome 9 Contains the 3'
              end of the PRSS3 gene for serine protease 3 (mesotrypsin)
              (MTG, TRY3, TRY4, PRSS4), the 5' end of a novel gene, two
              novel pseudogenes, a DC2 protein pseudogene, the UBC3B gene
              for ubiquitin-conjugating enzyme, two novel genes, the 3'
              end of a novel gene (KIAA1491, FLJ22435, FLJ21704,
              FLJ22148, FLJ33002) and a CpG island, complete sequence
          Length = 193280

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 430    caggtggatgaagaatagaaatgcatac 457
              |||| ||||||||||| |||||||||||
Sbjct: 103513 caggcggatgaagaatcgaaatgcatac 103486



to top

>emb|CR457233.1| Homo sapiens full open reading frame cDNA clone RZPDo834B049D for
           gene UBE2R2, ubiquitin-conjugating enzyme E2R 2;
           complete cds, incl. stopcodon
          Length = 717

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 301 caggcggatgaagaatcgaaatgcatac 274



to top

>gb|BC047584.1| Homo sapiens ubiquitin-conjugating enzyme E2R 2, mRNA (cDNA clone
           MGC:48413 IMAGE:4827644), complete cds
          Length = 1913

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 731 caggcggatgaagaatcgaaatgcatac 704



to top

>emb|AJ240087.1|HSA240087 Homo sapiens mRNA for ubiquitin-coniugating enzyme
          Length = 1204

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 306 caggcggatgaagaatcgaaatgcatac 279



to top

>emb|AJ240086.1|MMU240086 Mus musculus mRNA for ubiquitin coniugating enzyme 3b
          Length = 1198

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 309 caggcggatgaagaattgaaatgcatac 282



to top

>gb|AC007922.13| Homo sapiens chromosome 18, clone RP11-178F10, complete sequence
          Length = 140555

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    tcctgcttctctctccagtc 290
              ||||||||||||||||||||
Sbjct: 128489 tcctgcttctctctccagtc 128508



to top

>gb|AC023983.11| Homo sapiens chromosome 18, clone RP11-621L6, complete sequence
          Length = 190225

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    tcctgcttctctctccagtc 290
              ||||||||||||||||||||
Sbjct: 173293 tcctgcttctctctccagtc 173274



to top

>gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, complete sequence
          Length = 172865

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    cattttattcagagcatttc 227
              ||||||||||||||||||||
Sbjct: 163846 cattttattcagagcatttc 163865



to top

>dbj|AK003550.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110007L03
           product:UBIQUITIN-CONJUGATING ENZYME E2-32 KDA
           COMPLEMENTING (EC 6.3.2.19) (UBIQUITIN-PROTEIN LIGASE)
           (UBIQUITIN CARRIER PROTEIN) (E2-CDC34) homolog
           [Oryctolagus cuniculus], full insert sequence
          Length = 1210

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 370 caggcggatgaagaattgaaatgcatac 343



to top

>dbj|AK007517.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810015O10
           product:UBIQUITIN-CONJUGATING ENZYME E2-32 KDA
           COMPLEMENTING (EC 6.3.2.19) (UBIQUITIN-PROTEIN LIGASE)
           (UBIQUITIN CARRIER PROTEIN) (E2-CDC34) homolog
           [Oryctolagus cuniculus], full insert sequence
          Length = 1325

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 484 caggcggatgaagaattgaaatgcatac 457



to top

>dbj|AK075714.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched
           library, clone:1300006A07 product:UBIQUITIN-CONJUGATING
           ENZYME E2-32 KDA COMPLEMENTING (EC 6.3.2.19)
           (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
           (E2-CDC34) homolog [Oryctolagus cuniculus], full insert
           sequence
          Length = 3314

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 351 caggcggatgaagaattgaaatgcatac 324



to top

>dbj|AK075703.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched
           library, clone:1200003M11 product:UBIQUITIN-CONJUGATING
           ENZYME E2-32 KDA COMPLEMENTING (EC 6.3.2.19)
           (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
           (E2-CDC34) homolog [Oryctolagus cuniculus], full insert
           sequence
          Length = 1567

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 360 caggcggatgaagaattgaaatgcatac 333



to top

>gb|AC009275.8| Homo sapiens chromosome 7 clone RP11-38M8, complete sequence
          Length = 154406

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   cctgcttctctctccagtcc 291
             ||||||||||||||||||||
Sbjct: 91329 cctgcttctctctccagtcc 91348



to top

>gb|AY261362.1| African swine fever virus isolate Mkuzi 1979, complete genome
          Length = 192714

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 471    taaacattaggatgccacatttca 494
              |||| |||||||||||||||||||
Sbjct: 176130 taaatattaggatgccacatttca 176153



to top

>gb|AY830100.1| Phytophthora infestans copia-like retrotransposon CopiaPi-3,
           complete sequence
          Length = 5469

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 255 cttcttcttgaactcatcctgcttctct 282
           ||||||||||||||| || |||||||||
Sbjct: 446 cttcttcttgaactcctcttgcttctct 419



to top

>dbj|AK000426.1| Homo sapiens cDNA FLJ20419 fis, clone KAT02435
          Length = 1673

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 492 caggcggatgaagaatcgaaatgcatac 465



to top

>gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, complete sequence
          Length = 198851

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 18     acaattacaacaaccaggccctta 41
              ||||||||||||| ||||||||||
Sbjct: 197689 acaattacaacaagcaggccctta 197666



to top

>gb|BC011112.1| Mus musculus ubiquitin-conjugating enzyme E2R 2, mRNA (cDNA clone
           MGC:19259 IMAGE:3982808), complete cds
          Length = 1246

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 358 caggcggatgaagaattgaaatgcatac 331



to top

>emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-99L13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178433

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   attaggatgccacatttcaa 495
             ||||||||||||||||||||
Sbjct: 96083 attaggatgccacatttcaa 96064



to top

>gb|AC115692.6| Mus musculus chromosome 18, clone RP23-463G11, complete sequence
          Length = 227631

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    acaattacaacaaccaggccctta 41
             ||||||||||||| ||||||||||
Sbjct: 99631 acaattacaacaagcaggccctta 99654



to top

>emb|AL807823.6| Mouse DNA sequence from clone RP23-328E6 on chromosome 4, complete
              sequence
          Length = 216239

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 430    caggtggatgaagaatagaaatgcatac 457
              |||| ||||||||||| |||||||||||
Sbjct: 212715 caggcggatgaagaattgaaatgcatac 212742



to top

>ref|NM_026275.2| Mus musculus ubiquitin-conjugating enzyme E2R 2 (Ube2r2), mRNA
          Length = 3314

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 351 caggcggatgaagaattgaaatgcatac 324



to top

>gb|U58652.1|OCU58652 Oryctolagus cuniculus ubiquitin-conjugating enzyme E2-32k mRNA,
           partial cds
          Length = 961

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 caggtggatgaagaatagaaatgcatac 457
           |||| ||||||||||| |||||||||||
Sbjct: 337 caggcggatgaagaatcgaaatgcatac 310


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,000,141
Number of Sequences: 3902068
Number of extensions: 5000141
Number of successful extensions: 92694
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92396
Number of HSP's gapped (non-prelim): 250
length of query: 566
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 543
effective length of database: 17,143,297,704
effective search space: 9308810653272
effective search space used: 9308810653272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top