Clone Name | rbasd0e01 |
---|---|
Clone Library Name | barley_pub |
>gb|M74077.1|WHTUBICP T.aestivum ubiquitin carrier protein mRNA Length = 802 Score = 860 bits (434), Expect = 0.0 Identities = 537/566 (94%), Gaps = 8/566 (1%) Strand = Plus / Minus Query: 2 ttgatagccgaagcn-cacaattacaacaaccaggcccttagaataagggttgcgttttc 60 |||||||||||||| ||||||||||||||||| ||||||||||| | ||||||||||| Sbjct: 773 ttgatagccgaagccacacaattacaacaaccaaacccttagaatatgtgttgcgttttc 714 Query: 61 agagccaaaaccaagacctccacaggagacaggccaatggaaaatatacaggggagaagt 120 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 713 agagtcaaaaccaagacctccacaggagacaggctaatggaaaatatacaggggagaagt 654 Query: 121 gaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctccacacctgaaa 180 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 653 gaaattgctagtgtcggatggacatttggagatcaacagcaaaaccctccacacctgaaa 594 Query: 181 tggcatggctaacttccccggtactcccattttattcagagcatttcctgggatttcctt 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 593 tggcatggctaacttccccagtactcccattttattcagagcatttcctgggatttccgt 534 Query: 241 acggcacgcctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgct 300 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 533 acggcgcgcctgaccttcttcttgaactcatcctgcttctctctccagtccttagctgct 474 Query: 301 tcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatact 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 473 tcaatatttgccggtgattcatcatttggactagaaagcatcgaaatgatgcttaatact 414 Query: 361 atactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgg 420 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| | Sbjct: 413 atactctcaaccgtatggac--tggtgtccaacgctcacttgcgagctcatatccgtttg 356 Query: 421 gatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccggataaacattag 480 |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 355 gatcatcaccaggtggat---gaatagaaatgcatacccgcccatctggataaacattag 299 Query: 481 gatgccacatttcaagaagtgaatctaactgttggagggctgttcggataatttttgtgg 540 ||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 298 gatgccacatttc-agaagtgaatctgactgttggagggctgttcggataa-ttttgtgg 241 Query: 541 gaagctcataatagcattgaaatagc 566 |||||||||||| ||||||||||||| Sbjct: 240 gaagctcataattgcattgaaatagc 215
>dbj|AK112030.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E11, full insert sequence Length = 1158 Score = 321 bits (162), Expect = 1e-84 Identities = 383/449 (85%), Gaps = 7/449 (1%) Strand = Plus / Minus Query: 111 ggggagaagtgaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctcc 170 ||||||||||||| ||||||||||| || ||||||||| ||||||||| ||| | | | Sbjct: 855 ggggagaagtgaa-ttgctagtgtcaactg-acatttggaaatcgacagccaaatcatgc 798 Query: 171 acacctgaaatggcatggctaactt-ccccggtactcccattttattcagagcatttcct 229 ||| ||| ||| |||| |||||| |||| ||||| || ||| ||||||||||||| | Sbjct: 797 acatgtgacgtggtatggttaactttccccagtactgccggtttcttcagagcatttctt 738 Query: 230 gggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagt 289 | ||||||||||| ||||||||||| |||||||| |||||| |||||||||||| | Sbjct: 737 gtgatttccttacaaggcgcctaacctttttcttgaagtcatccctcttctctctccatt 678 Query: 290 cctttgctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatga 349 |||| ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||| Sbjct: 677 ccttagctgcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatga 618 Query: 350 tgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctc 409 |||| | ||||| |||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 617 tgctcagaactatgctctcaaccgtatgcac--tggtgtccaacgctcactcgcaagctc 560 Query: 410 gtatccgttgggatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccgg 469 || || ||||||||||||||||| ||||||||||||||||||||||| || |||||||| Sbjct: 559 ataaccattgggatcatcaccaggcggatgaagaatagaaatgcatacacgtccatccgg 500 Query: 470 ataaacattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggat 529 ||||||||| |||||||||||||| || || ||||| || |||||||| ||||| |||| Sbjct: 499 ataaacatttggatgccacatttc-tgaggtaaatctgacagttggaggactgttaggat 441 Query: 530 aatttttgtgggaagctcataatagcatt 558 || || ||||| |||||||| || ||||| Sbjct: 440 aa-ttctgtggaaagctcattattgcatt 413
>dbj|AK104148.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-B05, full insert sequence Length = 1123 Score = 321 bits (162), Expect = 1e-84 Identities = 383/449 (85%), Gaps = 7/449 (1%) Strand = Plus / Minus Query: 111 ggggagaagtgaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctcc 170 ||||||||||||| ||||||||||| || ||||||||| ||||||||| ||| | | | Sbjct: 767 ggggagaagtgaa-ttgctagtgtcaactg-acatttggaaatcgacagccaaatcatgc 710 Query: 171 acacctgaaatggcatggctaactt-ccccggtactcccattttattcagagcatttcct 229 ||| ||| ||| |||| |||||| |||| ||||| || ||| ||||||||||||| | Sbjct: 709 acatgtgacgtggtatggttaactttccccagtactgccggtttcttcagagcatttctt 650 Query: 230 gggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagt 289 | ||||||||||| ||||||||||| |||||||| |||||| |||||||||||| | Sbjct: 649 gtgatttccttacaaggcgcctaacctttttcttgaagtcatccctcttctctctccatt 590 Query: 290 cctttgctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatga 349 |||| ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||| Sbjct: 589 ccttagctgcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatga 530 Query: 350 tgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctc 409 |||| | ||||| |||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 529 tgctcagaactatgctctcaaccgtatgcac--tggtgtccaacgctcactcgcaagctc 472 Query: 410 gtatccgttgggatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccgg 469 || || ||||||||||||||||| ||||||||||||||||||||||| || |||||||| Sbjct: 471 ataaccattgggatcatcaccaggcggatgaagaatagaaatgcatacacgtccatccgg 412 Query: 470 ataaacattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggat 529 ||||||||| |||||||||||||| || || ||||| || |||||||| ||||| |||| Sbjct: 411 ataaacatttggatgccacatttc-tgaggtaaatctgacagttggaggactgttaggat 353 Query: 530 aatttttgtgggaagctcataatagcatt 558 || || ||||| |||||||| || ||||| Sbjct: 352 aa-ttctgtggaaagctcattattgcatt 325
>dbj|AK099038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135H01, full insert sequence Length = 1111 Score = 321 bits (162), Expect = 1e-84 Identities = 383/449 (85%), Gaps = 7/449 (1%) Strand = Plus / Minus Query: 111 ggggagaagtgaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctcc 170 ||||||||||||| ||||||||||| || ||||||||| ||||||||| ||| | | | Sbjct: 810 ggggagaagtgaa-ttgctagtgtcaactg-acatttggaaatcgacagccaaatcatgc 753 Query: 171 acacctgaaatggcatggctaactt-ccccggtactcccattttattcagagcatttcct 229 ||| ||| ||| |||| |||||| |||| ||||| || ||| ||||||||||||| | Sbjct: 752 acatgtgacgtggtatggttaactttccccagtactgccggtttcttcagagcatttctt 693 Query: 230 gggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagt 289 | ||||||||||| ||||||||||| |||||||| |||||| |||||||||||| | Sbjct: 692 gtgatttccttacaaggcgcctaacctttttcttgaagtcatccctcttctctctccatt 633 Query: 290 cctttgctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatga 349 |||| ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||| Sbjct: 632 ccttagctgcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatga 573 Query: 350 tgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctc 409 |||| | ||||| |||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 572 tgctcagaactatgctctcaaccgtatgcac--tggtgtccaacgctcactcgcaagctc 515 Query: 410 gtatccgttgggatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccgg 469 || || ||||||||||||||||| ||||||||||||||||||||||| || |||||||| Sbjct: 514 ataaccattgggatcatcaccaggcggatgaagaatagaaatgcatacacgtccatccgg 455 Query: 470 ataaacattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggat 529 ||||||||| |||||||||||||| || || ||||| || |||||||| ||||| |||| Sbjct: 454 ataaacatttggatgccacatttc-tgaggtaaatctgacagttggaggactgttaggat 396 Query: 530 aatttttgtgggaagctcataatagcatt 558 || || ||||| |||||||| || ||||| Sbjct: 395 aa-ttctgtggaaagctcattattgcatt 368
>ref|NM_190524.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 510 Score = 309 bits (156), Expect = 5e-81 Identities = 299/343 (87%), Gaps = 4/343 (1%) Strand = Plus / Minus Query: 216 tcagagcatttcctgggatttccttacggcacgcctaaccttcttcttgaactcatcctg 275 |||||||||||| || ||||||||||| ||||||||||| |||||||| |||||| Sbjct: 510 tcagagcatttcttgtgatttccttacaaggcgcctaacctttttcttgaagtcatccct 451 Query: 276 cttctctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactaga 335 |||||||||||| ||||| ||||||||||||||||| |||||||||||||| |||| ||| Sbjct: 450 cttctctctccattccttagctgcttcaatatttgctggtgattcatcatttggaccaga 391 Query: 336 aagcatcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgc 395 |||||||||||||||||| | ||||| |||||||||||||| || |||||||||||| Sbjct: 390 aagcatcgaaatgatgctcagaactatgctctcaaccgtatgcac--tggtgtccaacgc 333 Query: 396 tcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcat 455 |||||||| ||||| || || ||||||||||||||||| ||||||||||||||||||||| Sbjct: 332 tcactcgcaagctcataaccattgggatcatcaccaggcggatgaagaatagaaatgcat 273 Query: 456 acccgcccatccggataaacattaggatgccacatttcaagaagtgaatctaactgttgg 515 || || ||||||||||||||||| |||||||||||||| || || ||||| || ||||| Sbjct: 272 acacgtccatccggataaacatttggatgccacatttc-tgaggtaaatctgacagttgg 214 Query: 516 agggctgttcggataatttttgtgggaagctcataatagcatt 558 ||| ||||| |||||| || ||||| |||||||| || ||||| Sbjct: 213 aggactgttaggataa-ttctgtggaaagctcattattgcatt 172
>dbj|AK098861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O01, full insert sequence Length = 912 Score = 202 bits (102), Expect = 9e-49 Identities = 207/241 (85%), Gaps = 2/241 (0%) Strand = Plus / Minus Query: 250 ctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatattt 309 |||||||| |||||||| || ||| ||| |||||||| ||||| || |||||||||||| Sbjct: 596 ctaacctttttcttgaaatcgtccctcttttctctccaatccttagccgcttcaatattt 537 Query: 310 gccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctca 369 || || || |||||||| |||||||| ||||||||||||||||| | |||||||| ||| Sbjct: 536 gctggagactcatcatttggactagagagcatcgaaatgatgctcagaactatactttca 477 Query: 370 accgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcac 429 || ||||| || ||||||||||| || ||||| ||||| || ||||||||||| || | Sbjct: 476 actgtatgcaca--ggtgtccaacgttcgctcgcaagctcataaccgttgggatcttcgc 419 Query: 430 caggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccaca 489 ||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 418 caggtggatgaaggatagaaatgcatacgcgcccatcaggataaacatttggatgccaca 359 Query: 490 t 490 | Sbjct: 358 t 358
>emb|AJ002959.1|ZMAJ2959 Zea mays mRNA for ubiquitin carrier protein UBC7 Length = 780 Score = 200 bits (101), Expect = 4e-48 Identities = 319/388 (82%), Gaps = 4/388 (1%) Strand = Plus / Minus Query: 174 cctgaaatggcatggctaacttccccggtactcccattttattcagagcatttcctggga 233 ||||| ||||||||| ||||||| || | |||||||||| |||||| ||||||||| || Sbjct: 631 cctgacatggcatggttaacttcaccagcactcccatttccttcagaacatttcctgtga 572 Query: 234 tttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagtcctt 293 ||||| ||| ||||||||||| |||||||| || ||| || || ||||| ||||| Sbjct: 571 tttccgcacgatgcgcctaacctttttcttgaaatcctccctctgttccctccattcctt 512 Query: 294 tgctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgct 353 ||||| ||||| ||||| || || |||||||| |||||||| ||||| || || ||||| Sbjct: 511 agctgcctcaatgtttgctggagactcatcatttggactagagagcattgatataatgct 452 Query: 354 taatactatactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctcgtat 413 | ||||| || || || || || || |||||||| |||||||| |||||||| || Sbjct: 451 cagaactatgctttctactgtgtgcaca--ggtgtccatcgctcacttgcgagctcataa 394 Query: 414 ccgttgggatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccggataa 473 ||||| ||||| ||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 393 ccgtttggatcttcaccaggtggatgaagaatagagatacaaacccgcccatcaggatag 334 Query: 474 acattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggataatt 533 ||||| |||||||||||||| ||| || ||||| |||| ||| |||||||| || ||| | Sbjct: 333 acatttggatgccacatttc-agaggtaaatctgactgatggcgggctgtttgggtaa-t 276 Query: 534 tttgtgggaagctcataatagcattgaa 561 |||||||||||||||| || |||||||| Sbjct: 275 tttgtgggaagctcattattgcattgaa 248
>gb|AY103605.1| Zea mays PCO117734 mRNA sequence Length = 1205 Score = 200 bits (101), Expect = 4e-48 Identities = 319/388 (82%), Gaps = 4/388 (1%) Strand = Plus / Minus Query: 174 cctgaaatggcatggctaacttccccggtactcccattttattcagagcatttcctggga 233 ||||| ||||||||| ||||||| || | |||||||||| |||||| ||||||||| || Sbjct: 810 cctgagatggcatggttaacttcgccaggactcccatttccttcagaacatttcctgtga 751 Query: 234 tttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagtcctt 293 ||||| ||| ||||||||||| |||||||| || ||| || || ||||| ||||| Sbjct: 750 tttccgcacgatgcgcctaacctttttcttgaaatcctccctctgttccctccattcctt 691 Query: 294 tgctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgct 353 ||||| ||||| ||||| || || |||||||| |||||||| ||||| || || ||||| Sbjct: 690 agctgcctcaatgtttgctggagactcatcatttggactagagagcattgatataatgct 631 Query: 354 taatactatactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctcgtat 413 | ||||| || || || || || || |||||||| |||||||| |||||||| || Sbjct: 630 cagaactatgctttctactgtgtgcaca--ggtgtccatcgctcacttgcgagctcataa 573 Query: 414 ccgttgggatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccggataa 473 ||||| ||||| ||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 572 ccgtttggatcttcaccaggtggatgaagaatagagatacaaacccgcccatcaggatag 513 Query: 474 acattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggataatt 533 ||||| |||||||||||||| ||| || ||||| |||| ||| |||||||| || ||| | Sbjct: 512 acatttggatgccacatttc-agaggtaaatctgactgatggcgggctgtttgggtaa-t 455 Query: 534 tttgtgggaagctcataatagcattgaa 561 |||||||||||||||| || |||||||| Sbjct: 454 tttgtgggaagctcattattgcattgaa 427
>ref|XM_475366.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 510 Score = 194 bits (98), Expect = 2e-46 Identities = 206/241 (85%), Gaps = 2/241 (0%) Strand = Plus / Minus Query: 250 ctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatattt 309 |||||||| |||||||| || ||| ||| |||||||| ||||| || |||||||||||| Sbjct: 476 ctaacctttttcttgaaatcgtccctcttttctctccaatccttagccgcttcaatattt 417 Query: 310 gccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctca 369 || || || |||||||| |||||||| ||||||||||||||||| | |||||||| ||| Sbjct: 416 gctggagactcatcatttggactagagagcatcgaaatgatgctcagaactatactttca 357 Query: 370 accgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcac 429 || ||||| || |||||||| || || ||||| ||||| || ||||||||||| || | Sbjct: 356 actgtatgcaca--ggtgtccaccgttcgctcgcaagctcataaccgttgggatcttcgc 299 Query: 430 caggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccaca 489 ||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 298 caggtggatgaaggatagaaatgcatacgcgcccatcaggataaacatttggatgccaca 239 Query: 490 t 490 | Sbjct: 238 t 238
>dbj|AK111999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F08, full insert sequence Length = 1037 Score = 194 bits (98), Expect = 2e-46 Identities = 206/241 (85%), Gaps = 2/241 (0%) Strand = Plus / Minus Query: 250 ctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatattt 309 |||||||| |||||||| || ||| ||| |||||||| ||||| || |||||||||||| Sbjct: 595 ctaacctttttcttgaaatcgtccctcttttctctccaatccttagccgcttcaatattt 536 Query: 310 gccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctca 369 || || || |||||||| |||||||| ||||||||||||||||| | |||||||| ||| Sbjct: 535 gctggagactcatcatttggactagagagcatcgaaatgatgctcagaactatactttca 476 Query: 370 accgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcac 429 || ||||| || |||||||| || || ||||| ||||| || ||||||||||| || | Sbjct: 475 actgtatgcaca--ggtgtccaccgttcgctcgcaagctcataaccgttgggatcttcgc 418 Query: 430 caggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccaca 489 ||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 417 caggtggatgaaggatagaaatgcatacgcgcccatcaggataaacatttggatgccaca 358 Query: 490 t 490 | Sbjct: 357 t 357
>dbj|AK111857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021F14, full insert sequence Length = 1125 Score = 194 bits (98), Expect = 2e-46 Identities = 206/241 (85%), Gaps = 2/241 (0%) Strand = Plus / Minus Query: 250 ctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatattt 309 |||||||| |||||||| || ||| ||| |||||||| ||||| || |||||||||||| Sbjct: 585 ctaacctttttcttgaaatcgtccctcttttctctccaatccttagccgcttcaatattt 526 Query: 310 gccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctca 369 || || || |||||||| |||||||| ||||||||||||||||| | |||||||| ||| Sbjct: 525 gctggagactcatcatttggactagagagcatcgaaatgatgctcagaactatactttca 466 Query: 370 accgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcac 429 || ||||| || |||||||| || || ||||| ||||| || ||||||||||| || | Sbjct: 465 actgtatgcaca--ggtgtccaccgttcgctcgcaagctcataaccgttgggatcttcgc 408 Query: 430 caggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccaca 489 ||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 407 caggtggatgaaggatagaaatgcatacgcgcccatcaggataaacatttggatgccaca 348 Query: 490 t 490 | Sbjct: 347 t 347
>gb|BT016440.1| Zea mays clone Contig273 mRNA sequence Length = 1135 Score = 192 bits (97), Expect = 9e-46 Identities = 318/388 (81%), Gaps = 4/388 (1%) Strand = Plus / Minus Query: 174 cctgaaatggcatggctaacttccccggtactcccattttattcagagcatttcctggga 233 ||||| ||||||||| ||||||| || | |||||||||| |||||| ||||||||| || Sbjct: 796 cctgacatggcatggttaacttcaccaggactcccatttccttcagaacatttcctgtga 737 Query: 234 tttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagtcctt 293 ||||| ||| ||||||||||| |||||||| || ||| || || ||||| ||||| Sbjct: 736 tttccgcacgatgcgcctaacctttttcttgaaatcctccctctgttccctccattcctt 677 Query: 294 tgctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgct 353 ||||| ||||| ||||| || || |||||||| |||||||| ||||| || || ||||| Sbjct: 676 agctgcctcaatgtttgctggagactcatcatttggactagagagcattgatataatgct 617 Query: 354 taatactatactctcaaccgtatggacctgggtgtccaacgctcactcgcgagctcgtat 413 | ||||| || || || || || || |||||||| |||||||| || ||||| || Sbjct: 616 cagaactatgctttctactgtgtgcaca--ggtgtccatcgctcacttgctagctcataa 559 Query: 414 ccgttgggatcatcaccaggtggatgaagaatagaaatgcatacccgcccatccggataa 473 ||||| ||||| ||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 558 ccgtttggatcttcaccaggtggatgaagaatagagatacaaacccgcccatcaggatag 499 Query: 474 acattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggataatt 533 ||||| |||||||||||||| ||| || ||||| |||| ||| |||||||| || ||| | Sbjct: 498 acatttggatgccacatttc-agaggtaaatctgactgatggcgggctgtttgggtaa-t 441 Query: 534 tttgtgggaagctcataatagcattgaa 561 |||||||||||||||| || |||||||| Sbjct: 440 tttgtgggaagctcattattgcattgaa 413
>gb|BT019147.1| Zea mays clone Contig802.F mRNA sequence Length = 902 Score = 190 bits (96), Expect = 3e-45 Identities = 238/283 (84%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 248 gcctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatat 307 |||| ||||| ||||||||||||||| |||| |||||||| ||||| || ||||| |||| Sbjct: 325 gccttacctttttcttgaactcatcccgcttttctctccaatccttggcagcttcgatat 384 Query: 308 ttgccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactct 367 | || || || || ||||| |||||||| ||||||||||||||||| | |||||||| | Sbjct: 385 tcgctggagactcgtcatttggactagagagcatcgaaatgatgctcagaactatacttt 444 Query: 368 caaccgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatc 427 ||||||| || || |||||||| || || || || ||||| || || |||||||| || Sbjct: 445 caaccgtgtgcact--ggtgtccatcgttcgcttgcaagctcataaccattgggatcttc 502 Query: 428 accaggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487 ||||||||||||||||||||||||||| || || ||||| ||||||||||| |||||||| Sbjct: 503 accaggtggatgaagaatagaaatgcaaacacgtccatcaggataaacattcggatgcca 562 Query: 488 catttcaagaagtgaatctaactgttggagggctgttcggata 530 ||| || |||||| ||||| |||| ||| |||||||| ||||| Sbjct: 563 catctc-agaagtaaatcttactgatggcgggctgttgggata 604 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 aatggaaaatatacagggga 115 |||||||||||||||||||| Sbjct: 199 aatggaaaatatacagggga 218
>gb|AF032468.1|AF032468 Zea mays ubiquitin-conjugating enzyme protein E2 (ubc7) mRNA, complete cds Length = 776 Score = 190 bits (96), Expect = 3e-45 Identities = 238/283 (84%), Gaps = 3/283 (1%) Strand = Plus / Minus Query: 248 gcctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatat 307 |||| ||||| ||||||||||||||| |||| |||||||| ||||| || ||||| |||| Sbjct: 498 gccttacctttttcttgaactcatcccgcttttctctccaatccttggcagcttcgatat 439 Query: 308 ttgccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactct 367 | || || || || ||||| |||||||| ||||||||||||||||| | |||||||| | Sbjct: 438 tcgctggagactcgtcatttggactagagagcatcgaaatgatgctcagaactatacttt 379 Query: 368 caaccgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatc 427 ||||||| || || |||||||| || || || || ||||| || || |||||||| || Sbjct: 378 caaccgtgtgcac--tggtgtccatcgttcgcttgcaagctcataaccattgggatcttc 321 Query: 428 accaggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487 ||||||||||||||||||||||||||| || || ||||| ||||||||||| |||||||| Sbjct: 320 accaggtggatgaagaatagaaatgcaaacacgtccatcaggataaacattcggatgcca 261 Query: 488 catttcaagaagtgaatctaactgttggagggctgttcggata 530 ||| || |||||| ||||| |||| ||| |||||||| ||||| Sbjct: 260 catctc-agaagtaaatcttactgatggcgggctgttgggata 219 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 aatggaaaatatacagggga 115 |||||||||||||||||||| Sbjct: 624 aatggaaaatatacagggga 605
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 384 ggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaaga 443 |||||||||||||||||||| ||||| || || ||||||||||||||||| ||||||||| Sbjct: 36012331 ggtgtccaacgctcactcgcaagctcataaccattgggatcatcaccaggcggatgaaga 36012390 Query: 444 atagaaatgcatacccgcccatccggataaac 475 |||||||||||||| || |||||||||||||| Sbjct: 36012391 atagaaatgcatacacgtccatccggataaac 36012422 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 295 gctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgctt 354 ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| Sbjct: 36011442 gctgcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatgatgctc 36011501 Query: 355 aatactatactctcaacc 372 | ||||| ||||||||| Sbjct: 36011502 agaactatgctctcaacc 36011519 Score = 79.8 bits (40), Expect = 9e-12 Identities = 151/184 (82%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 111 ggggagaagtgaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctcc 170 ||||||||||||| ||||||||||| || ||||||||| ||||||||| ||| | | | Sbjct: 36010820 ggggagaagtgaa-ttgctagtgtcaactg-acatttggaaatcgacagccaaatcatgc 36010877 Query: 171 acacctgaaatggcatggctaactt-ccccggtactcccattttattcagagcatttcct 229 ||| ||| ||| |||| |||||| |||| ||||| || ||| ||||||||||||| | Sbjct: 36010878 acatgtgacgtggtatggttaactttccccagtactgccggtttcttcagagcatttctt 36010937 Query: 230 gggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagt 289 | ||||||||||| ||||||||||| |||||||| |||||| |||||||||||| | Sbjct: 36010938 gtgatttccttacaaggcgcctaacctttttcttgaagtcatccctcttctctctccatt 36010997 Query: 290 cctt 293 |||| Sbjct: 36010998 cctt 36011001 Score = 40.1 bits (20), Expect = 7.7 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand = Plus / Plus Query: 475 cattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggataattt 534 |||| |||||||||||||| || || ||||| || |||||||| ||||| |||||| || Sbjct: 36012506 catttggatgccacatttc-tgaggtaaatctgacagttggaggactgttaggataa-tt 36012563 Query: 535 ttgtgggaagctcataatagcatt 558 ||||| |||||||| || ||||| Sbjct: 36012564 ctgtggaaagctcattattgcatt 36012587
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 384 ggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaaga 443 |||||||||||||||||||| ||||| || || ||||||||||||||||| ||||||||| Sbjct: 25056 ggtgtccaacgctcactcgcaagctcataaccattgggatcatcaccaggcggatgaaga 25115 Query: 444 atagaaatgcatacccgcccatccggataaac 475 |||||||||||||| || |||||||||||||| Sbjct: 25116 atagaaatgcatacacgtccatccggataaac 25147 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 295 gctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgctt 354 ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| Sbjct: 24167 gctgcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatgatgctc 24226 Query: 355 aatactatactctcaacc 372 | ||||| ||||||||| Sbjct: 24227 agaactatgctctcaacc 24244 Score = 79.8 bits (40), Expect = 9e-12 Identities = 151/184 (82%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 111 ggggagaagtgaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctcc 170 ||||||||||||| ||||||||||| || ||||||||| ||||||||| ||| | | | Sbjct: 23545 ggggagaagtgaa-ttgctagtgtcaactg-acatttggaaatcgacagccaaatcatgc 23602 Query: 171 acacctgaaatggcatggctaactt-ccccggtactcccattttattcagagcatttcct 229 ||| ||| ||| |||| |||||| |||| ||||| || ||| ||||||||||||| | Sbjct: 23603 acatgtgacgtggtatggttaactttccccagtactgccggtttcttcagagcatttctt 23662 Query: 230 gggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagt 289 | ||||||||||| ||||||||||| |||||||| |||||| |||||||||||| | Sbjct: 23663 gtgatttccttacaaggcgcctaacctttttcttgaagtcatccctcttctctctccatt 23722 Query: 290 cctt 293 |||| Sbjct: 23723 cctt 23726 Score = 40.1 bits (20), Expect = 7.7 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand = Plus / Plus Query: 475 cattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggataattt 534 |||| |||||||||||||| || || ||||| || |||||||| ||||| |||||| || Sbjct: 25231 catttggatgccacatttc-tgaggtaaatctgacagttggaggactgttaggataa-tt 25288 Query: 535 ttgtgggaagctcataatagcatt 558 ||||| |||||||| || ||||| Sbjct: 25289 ctgtggaaagctcattattgcatt 25312
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 384 ggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaaga 443 |||||||||||||||||||| ||||| || || ||||||||||||||||| ||||||||| Sbjct: 111009 ggtgtccaacgctcactcgcaagctcataaccattgggatcatcaccaggcggatgaaga 111068 Query: 444 atagaaatgcatacccgcccatccggataaac 475 |||||||||||||| || |||||||||||||| Sbjct: 111069 atagaaatgcatacacgtccatccggataaac 111100 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 295 gctgcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgctt 354 ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| Sbjct: 110120 gctgcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatgatgctc 110179 Query: 355 aatactatactctcaacc 372 | ||||| ||||||||| Sbjct: 110180 agaactatgctctcaacc 110197 Score = 79.8 bits (40), Expect = 9e-12 Identities = 151/184 (82%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 111 ggggagaagtgaaattgctagtgtcggatggacatttggagatcgacagcaaaaccctcc 170 ||||||||||||| ||||||||||| || ||||||||| ||||||||| ||| | | | Sbjct: 109498 ggggagaagtgaa-ttgctagtgtcaactg-acatttggaaatcgacagccaaatcatgc 109555 Query: 171 acacctgaaatggcatggctaactt-ccccggtactcccattttattcagagcatttcct 229 ||| ||| ||| |||| |||||| |||| ||||| || ||| ||||||||||||| | Sbjct: 109556 acatgtgacgtggtatggttaactttccccagtactgccggtttcttcagagcatttctt 109615 Query: 230 gggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttctctctccagt 289 | ||||||||||| ||||||||||| |||||||| |||||| |||||||||||| | Sbjct: 109616 gtgatttccttacaaggcgcctaacctttttcttgaagtcatccctcttctctctccatt 109675 Query: 290 cctt 293 |||| Sbjct: 109676 cctt 109679 Score = 40.1 bits (20), Expect = 7.7 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand = Plus / Plus Query: 475 cattaggatgccacatttcaagaagtgaatctaactgttggagggctgttcggataattt 534 |||| |||||||||||||| || || ||||| || |||||||| ||||| |||||| || Sbjct: 111184 catttggatgccacatttc-tgaggtaaatctgacagttggaggactgttaggataa-tt 111241 Query: 535 ttgtgggaagctcataatagcatt 558 ||||| |||||||| || ||||| Sbjct: 111242 ctgtggaaagctcattattgcatt 111265
>ref|NM_125320.1| Arabidopsis thaliana UBC7; ubiquitin conjugating enzyme AT5G59300 (UBC7) mRNA, complete cds Length = 597 Score = 103 bits (52), Expect = 6e-19 Identities = 190/235 (80%), Gaps = 2/235 (0%) Strand = Plus / Minus Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315 ||||||||||||||||| ||| |||| ||| || || || ||||||| |||||| || Sbjct: 557 ttcttcttgaactcatctctcttatctcgccattctttggcagcttcaacatttgctgga 498 Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375 || ||||| || |||| ||||||||| || ||||| || || | ||||||||||| ||| Sbjct: 497 gactcatcgttaggaccagaaagcattgatatgatactcaacataatactctcaactgta 438 Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435 || || || ||||||||||| || || ||||| || ||| | ||||||||||| || | Sbjct: 437 tgaaca--ggagtccaacgctcgcttgcaagctcataaccgctaggatcatcaccgggag 380 Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccacat 490 ||||||||||||| ||||| || || ||||| | |||||| |||||||||||||| Sbjct: 379 gatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccacat 325
>gb|AY080733.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC7 (At5g59300) mRNA, partial cds Length = 852 Score = 103 bits (52), Expect = 6e-19 Identities = 190/235 (80%), Gaps = 2/235 (0%) Strand = Plus / Minus Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315 ||||||||||||||||| ||| |||| ||| || || || ||||||| |||||| || Sbjct: 525 ttcttcttgaactcatctctcttatctcgccattctttggcagcttcaacatttgctgga 466 Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375 || ||||| || |||| ||||||||| || ||||| || || | ||||||||||| ||| Sbjct: 465 gactcatcgttaggaccagaaagcattgatatgatactcaacataatactctcaactgta 406 Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435 || || || ||||||||||| || || ||||| || ||| | ||||||||||| || | Sbjct: 405 tgaaca--ggagtccaacgctcgcttgcaagctcataaccgctaggatcatcaccgggag 348 Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccacat 490 ||||||||||||| ||||| || || ||||| | |||||| |||||||||||||| Sbjct: 347 gatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccacat 293
>emb|BX833817.1|CNS0A23A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL78ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 740 Score = 103 bits (52), Expect = 6e-19 Identities = 190/235 (80%), Gaps = 2/235 (0%) Strand = Plus / Minus Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315 ||||||||||||||||| ||| |||| ||| || || || ||||||| |||||| || Sbjct: 483 ttcttcttgaactcatctctcttatctcgccattctttggcagcttcaacatttgctgga 424 Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375 || ||||| || |||| ||||||||| || ||||| || || | ||||||||||| ||| Sbjct: 423 gactcatcgttaggaccagaaagcattgatatgatactcaacataatactctcaactgta 364 Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435 || || || ||||||||||| || || ||||| || ||| | ||||||||||| || | Sbjct: 363 tgaaca--ggagtccaacgctcgcttgcaagctcataaccgctaggatcatcaccgggag 306 Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccacat 490 ||||||||||||| ||||| || || ||||| | |||||| |||||||||||||| Sbjct: 305 gatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccacat 251
>gb|BT005798.1| Arabidopsis thaliana clone C105469 putative E2, ubiquitin-conjugating enzyme UBC7 (At5g59300) mRNA, complete cds Length = 643 Score = 103 bits (52), Expect = 6e-19 Identities = 190/235 (80%), Gaps = 2/235 (0%) Strand = Plus / Minus Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315 ||||||||||||||||| ||| |||| ||| || || || ||||||| |||||| || Sbjct: 572 ttcttcttgaactcatctctcttatctcgccattctttggcagcttcaacatttgctgga 513 Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375 || ||||| || |||| ||||||||| || ||||| || || | ||||||||||| ||| Sbjct: 512 gactcatcgttaggaccagaaagcattgatatgatactcaacataatactctcaactgta 453 Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435 || || || ||||||||||| || || ||||| || ||| | ||||||||||| || | Sbjct: 452 tgaaca--ggagtccaacgctcgcttgcaagctcataaccgctaggatcatcaccgggag 395 Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccacat 490 ||||||||||||| ||||| || || ||||| | |||||| |||||||||||||| Sbjct: 394 gatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccacat 340
>ref|NM_115396.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G55380 mRNA, complete cds Length = 883 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/211 (81%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339 |||||||| |||||||| ||||| | ||| || ||||| ||||| || |||| || ||| Sbjct: 541 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 482 Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399 ||||| ||||| || || || || || || ||||||||||| |||| |||||| ||| Sbjct: 481 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 424 Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459 || ||||||||||| | |||||||||||||| |||||||||||||||||||| || Sbjct: 423 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 364 Query: 460 gcccatccggataaacattaggatgccacat 490 ||||| | ||||||||||||||||||||| Sbjct: 363 ttccatcagaataaacattaggatgccacat 333
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 384 ggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaaga 443 |||||||| || || ||||| ||||| || ||||||||||| || |||||||||||||| Sbjct: 62927 ggtgtccaccgttcgctcgcaagctcataaccgttgggatcttcgccaggtggatgaagg 62868 Query: 444 atagaaatgcatacccgcccatccggataaac 475 |||||||||||||| |||||||| |||||||| Sbjct: 62867 atagaaatgcatacgcgcccatcaggataaac 62836 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 298 gcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgcttaat 357 |||||||||||||| || || |||||||| |||||||| ||||||||||||||||| | Sbjct: 63532 gcttcaatatttgctggagactcatcatttggactagagagcatcgaaatgatgctcaga 63473 Query: 358 actatactctcaacc 372 |||||||| |||||| Sbjct: 63472 actatactttcaacc 63458
>gb|AY117262.1| Arabidopsis thaliana putative E2 ubiquitin-conjugating enzyme UBC14 (At3g55380) mRNA, complete cds Length = 535 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/211 (81%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339 |||||||| |||||||| ||||| | ||| || ||||| ||||| || |||| || ||| Sbjct: 440 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 381 Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399 ||||| ||||| || || || || || || ||||||||||| |||| |||||| ||| Sbjct: 380 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 323 Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459 || ||||||||||| | |||||||||||||| |||||||||||||||||||| || Sbjct: 322 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 263 Query: 460 gcccatccggataaacattaggatgccacat 490 ||||| | ||||||||||||||||||||| Sbjct: 262 ttccatcagaataaacattaggatgccacat 232
>emb|X72625.1|ATUCEE2A A.thaliana UbcAT3 mRNA for ubiquitin conjugating enzyme E2 Length = 887 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/211 (81%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339 |||||||| |||||||| ||||| | ||| || ||||| ||||| || |||| || ||| Sbjct: 535 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 476 Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399 ||||| ||||| || || || || || || ||||||||||| |||| |||||| ||| Sbjct: 475 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 418 Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459 || ||||||||||| | |||||||||||||| |||||||||||||||||||| || Sbjct: 417 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 358 Query: 460 gcccatccggataaacattaggatgccacat 490 ||||| | ||||||||||||||||||||| Sbjct: 357 ttccatcagaataaacattaggatgccacat 327
>gb|AY045883.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC14 (At3g55380) mRNA, complete cds Length = 898 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/211 (81%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339 |||||||| |||||||| ||||| | ||| || ||||| ||||| || |||| || ||| Sbjct: 549 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 490 Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399 ||||| ||||| || || || || || || ||||||||||| |||| |||||| ||| Sbjct: 489 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 432 Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459 || ||||||||||| | |||||||||||||| |||||||||||||||||||| || Sbjct: 431 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 372 Query: 460 gcccatccggataaacattaggatgccacat 490 ||||| | ||||||||||||||||||||| Sbjct: 371 ttccatcagaataaacattaggatgccacat 341
>gb|AF462205.1| Narcissus pseudonarcissus putative ubiquitin conjugating enzyme mRNA, partial cds Length = 498 Score = 95.6 bits (48), Expect = 2e-16 Identities = 216/271 (79%), Gaps = 2/271 (0%) Strand = Plus / Minus Query: 220 agcatttcctgggatttccttacggcacgcctaaccttcttcttgaactcatcctgcttc 279 ||||||||||| |||||||| ||| || || || ||||||||||| || ||| || | Sbjct: 290 agcatttcctgagatttcctgacgatgcggcttactttcttcttgaaatcgtcccgccta 231 Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339 |||||||| || || || |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 230 tctctccattctttggcggcttcaatatttgcaggagattcatcattgggactggaaagc 171 Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399 || || || || || || | || |||||||||||||| || ||||||||||| |||| Sbjct: 170 atggatataatactcaaaagaatgctctcaaccgtatgcac--aggtgtccaacgttcac 113 Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459 | || || || || || | |||||||| ||||||| || || || || ||||| || | Sbjct: 112 ttgcaagttcatagccacttggatcatctccaggtgcgtgcaggattgagatgcaaacac 53 Query: 460 gcccatccggataaacattaggatgccacat 490 ||||||| ||||| ||||| ||||||||||| Sbjct: 52 gcccatcgggatacacatttggatgccacat 22
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 384 ggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaaga 443 |||||||| || || ||||| ||||| || ||||||||||| || |||||||||||||| Sbjct: 22473520 ggtgtccaccgttcgctcgcaagctcataaccgttgggatcttcgccaggtggatgaagg 22473461 Query: 444 atagaaatgcatacccgcccatccggataaac 475 |||||||||||||| |||||||| |||||||| Sbjct: 22473460 atagaaatgcatacgcgcccatcaggataaac 22473429 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 298 gcttcaatatttgccggtgattcatcattcggactagaaagcatcgaaatgatgcttaat 357 |||||||||||||| || || |||||||| |||||||| ||||||||||||||||| | Sbjct: 22474125 gcttcaatatttgctggagactcatcatttggactagagagcatcgaaatgatgctcaga 22474066 Query: 358 actatactctcaacc 372 |||||||| |||||| Sbjct: 22474065 actatactttcaacc 22474051
>emb|BX825254.1|CNS0A53C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL23ZB03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 842 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/211 (81%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339 |||||||| |||||||| ||||| | ||| || ||||| ||||| || |||| || ||| Sbjct: 520 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 461 Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399 ||||| ||||| || || || || || || ||||||||||| |||| |||||| ||| Sbjct: 460 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 403 Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459 || ||||||||||| | |||||||||||||| |||||||||||||||||||| || Sbjct: 402 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 343 Query: 460 gcccatccggataaacattaggatgccacat 490 ||||| | ||||||||||||||||||||| Sbjct: 342 ttccatcagaataaacattaggatgccacat 312
>gb|AY086490.1| Arabidopsis thaliana clone 25382 mRNA, complete sequence Length = 785 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/211 (81%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339 |||||||| |||||||| ||||| | ||| || ||||| ||||| || |||| || ||| Sbjct: 465 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 406 Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399 ||||| ||||| || || || || || || ||||||||||| |||| |||||| ||| Sbjct: 405 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 348 Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459 || ||||||||||| | |||||||||||||| |||||||||||||||||||| || Sbjct: 347 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 288 Query: 460 gcccatccggataaacattaggatgccacat 490 ||||| | ||||||||||||||||||||| Sbjct: 287 ttccatcagaataaacattaggatgccacat 257
>gb|DQ027028.1| Arabidopsis thaliana ubiquitinating enzyme (At3g55380) mRNA, complete cds Length = 504 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/211 (81%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 280 tctctccagtcctttgctgcttcaatatttgccggtgattcatcattcggactagaaagc 339 |||||||| |||||||| ||||| | ||| || ||||| ||||| || |||| || ||| Sbjct: 440 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 381 Query: 340 atcgaaatgatgcttaatactatactctcaaccgtatggacctgggtgtccaacgctcac 399 ||||| ||||| || || || || || || ||||||||||| |||| |||||| ||| Sbjct: 380 atcgatatgatactcaacacaatgctttctaccgtatggacaggggt--ccaacgttcag 323 Query: 400 tcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgcataccc 459 || ||||||||||| | |||||||||||||| |||||||||||||||||||| || Sbjct: 322 aggcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgcaaactt 263 Query: 460 gcccatccggataaacattaggatgccacat 490 ||||| | ||||||||||||||||||||| Sbjct: 262 ttccatcagaataaacattaggatgccacat 232
>emb|BX833254.1|CNS0A238 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 816 Score = 91.7 bits (46), Expect = 2e-15 Identities = 193/241 (80%), Gaps = 2/241 (0%) Strand = Plus / Minus Query: 250 ctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatattt 309 ||||| ||||||||||||||||| || |||| ||| || || || ||||||| |||| Sbjct: 529 ctaactttcttcttgaactcatctctctcatctcgccattctttggcagcttcaacattt 470 Query: 310 gccggtgattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctca 369 || || || ||||| || |||| ||||||||| || ||||| || || | ||||||||| Sbjct: 469 gctggagactcatcgttaggaccagaaagcattgatatgatactcaacataatactctca 410 Query: 370 accgtatggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcac 429 || ||||| || || || |||||||| || || ||||| || ||| | |||||||||| Sbjct: 409 actgtatgaaca--ggagttcaacgctcgcttgcaagctcataaccgctaggatcatcac 352 Query: 430 caggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccaca 489 | || |||||||||||||| ||||| || || ||||| | |||||| ||||||||||||| Sbjct: 351 cgggaggatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccaca 292 Query: 490 t 490 | Sbjct: 291 t 291
>ref|NM_114513.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G46460 mRNA, complete cds Length = 857 Score = 81.8 bits (41), Expect = 2e-12 Identities = 185/232 (79%), Gaps = 2/232 (0%) Strand = Plus / Minus Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315 ||||||||||||||||| |||||||||||| || || || || |||| ||||| || Sbjct: 598 ttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctgga 539 Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375 ||||| || || |||| ||| ||||| || || || || || | ||||||||||| || Sbjct: 538 gattcgtcgttgggaccagagagcattgatataatactcaacatgatactctcaactgtg 479 Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435 || || || |||||||||||||| || ||||| ||||| | |||||||||||||| | Sbjct: 478 tgaac--aggcgtccaacgctcacttgcaagctcatatccacttggatcatcaccaggag 421 Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487 |||| |||||||| || || || || ||||| |||||||| ||||||||||| Sbjct: 420 gatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgcca 369
>gb|AY094040.1| Arabidopsis thaliana AT3g46460/F18L15_180 mRNA, complete cds Length = 501 Score = 81.8 bits (41), Expect = 2e-12 Identities = 185/232 (79%), Gaps = 2/232 (0%) Strand = Plus / Minus Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315 ||||||||||||||||| |||||||||||| || || || || |||| ||||| || Sbjct: 461 ttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctgga 402 Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375 ||||| || || |||| ||| ||||| || || || || || | ||||||||||| || Sbjct: 401 gattcgtcgttgggaccagagagcattgatataatactcaacatgatactctcaactgtg 342 Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435 || || || |||||||||||||| || ||||| ||||| | |||||||||||||| | Sbjct: 341 tgaac--aggcgtccaacgctcacttgcaagctcatatccacttggatcatcaccaggag 284 Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487 |||| |||||||| || || || || ||||| |||||||| ||||||||||| Sbjct: 283 gatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgcca 232
>gb|AY050368.1| Arabidopsis thaliana AT3g46460/F18L15_180 mRNA, complete cds Length = 780 Score = 81.8 bits (41), Expect = 2e-12 Identities = 185/232 (79%), Gaps = 2/232 (0%) Strand = Plus / Minus Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315 ||||||||||||||||| |||||||||||| || || || || |||| ||||| || Sbjct: 598 ttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctgga 539 Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375 ||||| || || |||| ||| ||||| || || || || || | ||||||||||| || Sbjct: 538 gattcgtcgttgggaccagagagcattgatataatactcaacatgatactctcaactgtg 479 Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435 || || || |||||||||||||| || ||||| ||||| | |||||||||||||| | Sbjct: 478 tgaac--aggcgtccaacgctcacttgcaagctcatatccacttggatcatcaccaggag 421 Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487 |||| |||||||| || || || || ||||| |||||||| ||||||||||| Sbjct: 420 gatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgcca 369
>gb|DQ027027.1| Arabidopsis thaliana ubiquitinating enzyme (At3g46460) mRNA, complete cds Length = 501 Score = 81.8 bits (41), Expect = 2e-12 Identities = 185/232 (79%), Gaps = 2/232 (0%) Strand = Plus / Minus Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315 ||||||||||||||||| |||||||||||| || || || || |||| ||||| || Sbjct: 461 ttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctgga 402 Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375 ||||| || || |||| ||| ||||| || || || || || | ||||||||||| || Sbjct: 401 gattcgtcgttgggaccagagagcattgatataatactcaacatgatactctcaactgtg 342 Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435 || || || |||||||||||||| || ||||| ||||| | |||||||||||||| | Sbjct: 341 tgaac--aggcgtccaacgctcacttgcaagctcatatccacttggatcatcaccaggag 284 Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487 |||| |||||||| || || || || ||||| |||||||| ||||||||||| Sbjct: 283 gatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgcca 232
>gb|DQ284482.1| Solanum tuberosum clone 178D03 ubiquitin-conjugating protein 13-like mRNA, complete cds Length = 820 Score = 75.8 bits (38), Expect = 1e-10 Identities = 137/169 (81%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 319 tcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgtatgg 378 |||||||| || || |||||||| || ||||||||||| | ||||||||| ||||| ||| Sbjct: 483 tcatcattagggcttgaaagcatggatatgatgcttaaaattatactctccaccgtgtgg 424 Query: 379 acctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggat 438 || || | |||||||||||| || ||| || || || |||||||||||||| || | Sbjct: 423 aca--ggagaccaacgctcactagcatactcatagccatttggatcatcaccaggagggt 366 Query: 439 gaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487 ||||||| || ||||| ||| |||||| | ||||||||||||||||| Sbjct: 365 gaagaattgagatgcaaaccttcccatcagagtaaacattaggatgcca 317
>gb|DQ284455.1| Solanum tuberosum clone 007A03 putative E2 ubiquitin-conjugating protein UBC7-like mRNA, complete cds Length = 783 Score = 75.8 bits (38), Expect = 1e-10 Identities = 137/169 (81%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 319 tcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgtatgg 378 |||||||| || || |||||||| || ||||||||||| | ||||||||| ||||| ||| Sbjct: 465 tcatcattagggcttgaaagcatggatatgatgcttaaaattatactctccaccgtgtgg 406 Query: 379 acctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggat 438 || || | |||||||||||| || ||| || || || ||||||||||||||||| | Sbjct: 405 aca--ggagaccaacgctcactagcatactcatagccatttggatcatcaccaggtgggt 348 Query: 439 gaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487 ||||||| || ||||| ||| |||||| | || |||||||||||||| Sbjct: 347 gaagaattgagatgcaaaccttcccatcagagtacacattaggatgcca 299
>gb|DQ252513.1| Solanum tuberosum clone 089D04 ubiquitin-conjugating enzyme E2 7-like mRNA, complete cds Length = 807 Score = 75.8 bits (38), Expect = 1e-10 Identities = 137/169 (81%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 319 tcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgtatgg 378 |||||||| || || |||||||| || ||||||||||| | ||||||||| ||||| ||| Sbjct: 485 tcatcattagggcttgaaagcatggatatgatgcttaaaattatactctccaccgtgtgg 426 Query: 379 acctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggat 438 || || | |||||||||||| || ||| || || || |||||||||||||| || | Sbjct: 425 aca--ggagaccaacgctcactagcatactcatagccatttggatcatcaccaggagggt 368 Query: 439 gaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487 ||||||| || ||||| ||| |||||| | ||||||||||||||||| Sbjct: 367 gaagaattgagatgcaaaccttcccatcagagtaaacattaggatgcca 319
>emb|BX825758.1|CNS0A66U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZE06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 799 Score = 73.8 bits (37), Expect = 6e-10 Identities = 184/232 (79%), Gaps = 2/232 (0%) Strand = Plus / Minus Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315 ||||||||||||||||| |||||||||||| || || || || |||| ||||| || Sbjct: 586 ttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctgga 527 Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375 ||||| || || |||| ||||||||| || || || || || | ||||||||||| || Sbjct: 526 gattcgtcgttgggaccagaaagcattgatataatactcaacatgatactctcaactgtt 467 Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435 | || || |||||||||||| | || ||||| ||||| | |||||||||||||| | Sbjct: 466 ttaac--aggcgtccaacgctcatttgcaagctcatatccacttggatcatcaccaggag 409 Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487 |||| |||||||| || || || || ||||| |||||||| ||||||||||| Sbjct: 408 gatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgcca 357
>emb|BX842105.1|CNS09YES Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZD06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 840 Score = 73.8 bits (37), Expect = 6e-10 Identities = 184/232 (79%), Gaps = 2/232 (0%) Strand = Plus / Minus Query: 256 ttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatatttgccggt 315 ||||||||||||||||| |||||||||||| || || || || |||| ||||| || Sbjct: 581 ttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctgga 522 Query: 316 gattcatcattcggactagaaagcatcgaaatgatgcttaatactatactctcaaccgta 375 ||||| || || |||| ||| ||||| || || || || || | ||||||||||| || Sbjct: 521 gattcgtcgttgggaccagagagcattgatataatactcaacatgatactctcaactgtg 462 Query: 376 tggacctgggtgtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtg 435 || || || |||||||||| ||| || ||||| ||||| | |||||||||||||| | Sbjct: 461 tgaac--aggcgtccaacgctgacttgcaagctcatatccacttggatcatcaccaggag 404 Query: 436 gatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487 |||| |||||||| || || || || ||||| |||||||| ||||||||||| Sbjct: 403 gatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgcca 352
>gb|U33759.1|ATU33759 Arabidopsis ubiquitin conjugating enzyme E2 (UBC14) gene, complete cds Length = 2107 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 405 agctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgca 454 ||||||||||| | |||||||||||||| |||||||||||||||||||| Sbjct: 1083 agctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 1034
>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16 Length = 103240 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 405 agctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgca 454 ||||||||||| | |||||||||||||| |||||||||||||||||||| Sbjct: 14764 agctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 14715
>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15 Length = 100328 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 387 gtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaata 446 |||||||||||||| || ||||| ||||| | |||||||||||||| ||||| |||||| Sbjct: 82714 gtccaacgctcacttgcaagctcatatccacttggatcatcaccaggaggatgtagaata 82773 Query: 447 gaaatgcatacccgcccatccggataaac 475 || || || || || ||||| |||||||| Sbjct: 82774 gatatacaaacgcggccatcgggataaac 82802 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 256 ttcttcttgaactcatcctgcttctctctcca 287 ||||||||||||||||| |||||||||||| Sbjct: 82346 ttcttcttgaactcatctctcttctctctcca 82377
>gb|U33758.1|ATU33758 Arabidopsis ubiquitin conjugating enzyme E2 (UBC13) gene, complete cds Length = 2209 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 387 gtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaata 446 |||||||||||||| || ||||| ||||| | |||||||||||||| ||||| |||||| Sbjct: 1141 gtccaacgctcacttgcaagctcatatccacttggatcatcaccaggaggatgtagaata 1082 Query: 447 gaaatgcatacccgcccatccggataaac 475 || || || || || ||||| |||||||| Sbjct: 1081 gatatacaaacgcggccatcgggataaac 1053 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 256 ttcttcttgaactcatcctgcttctctctcca 287 ||||||||||||||||| |||||||||||| Sbjct: 1509 ttcttcttgaactcatctctcttctctctcca 1478
>ref|XM_824383.1| Trypanosoma brucei TREU927 ubiquitin-conjugating enzyme E2 (Tb11.01.5790) partial mRNA Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 432 ggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgcca 487 ||||||||||||||||||||||| || || ||||| ||||||||||| || ||||| Sbjct: 272 ggtggatgaagaatagaaatgcacacacgaccatcgggataaacattcgggtgcca 217
>dbj|AK102646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100I12, full insert sequence Length = 2666 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 250 ctaaccttcttcttgaactcatcctgcttctctctccagtcctttgctgcttcaatattt 309 |||||||| |||||||| || ||| ||| |||||||| ||||| || |||||||||||| Sbjct: 2332 ctaacctttttcttgaaatcgtccctcttttctctccaatccttagccgcttcaatattt 2273 Query: 310 gccggtgattcatcattcggact 332 || || || |||||||| ||||| Sbjct: 2272 gctggagactcatcatttggact 2250
>ref|XM_661133.1| Cryptosporidium hominis TU502 ubiquitin conjugating enzyme E2 (Chro.10052) partial mRNA Length = 288 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 429 ccaggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccac 488 ||||| |||||||| ||||| |||||||| ||||| ||||| ||||||||||||||| Sbjct: 80 ccaggaggatgaagtatagatatgcatacatttccatcaggatatacattaggatgccac 21 Query: 489 atttc 493 ||||| Sbjct: 20 atttc 16
>ref|XM_627901.1| Cryptosporidium parvum Iowa II ubiquitin conjugating enzyme (cgd1_410), partial mRNA Length = 471 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 429 ccaggtggatgaagaatagaaatgcatacccgcccatccggataaacattaggatgccac 488 ||||| |||||||| ||||| |||||||| ||||| ||||| ||||||||||||||| Sbjct: 263 ccaggaggatgaagtatagatatgcatacatttccatcaggatatacattaggatgccac 204 Query: 489 atttc 493 ||||| Sbjct: 203 atttc 199
>dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC17 Length = 75803 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 387 gtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaata 446 ||||||||||| || || ||||| || ||| | ||||||||||| || |||||||||||| Sbjct: 59558 gtccaacgctcgcttgcaagctcataaccgctaggatcatcaccgggaggatgaagaata 59617 Query: 447 gaaatgcatacccgcccatccggataaac 475 || ||||| || || ||||| | |||||| Sbjct: 59618 gatatgcaaacacgaccatcagaataaac 59646
>gb|U33757.1|ATU33757 Arabidopsis thaliana ubiquitin conjugating enzyme E2 (UBC7) gene, complete cds Length = 2705 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 387 gtccaacgctcactcgcgagctcgtatccgttgggatcatcaccaggtggatgaagaata 446 ||||||||||| || || ||||| || ||| | ||||||||||| || |||||||||||| Sbjct: 1576 gtccaacgctcgcttgcaagctcataaccgctaggatcatcaccgggaggatgaagaata 1517 Query: 447 gaaatgcatacccgcccatccggataaac 475 || ||||| || || ||||| | |||||| Sbjct: 1516 gatatgcaaacacgaccatcagaataaac 1488
>ref|XM_618072.2| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2R 2, transcript variant 1 (LOC537885), mRNA Length = 1269 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||||||||||||||| ||||||||||| Sbjct: 126 caggtggatgaagaattgaaatgcatac 99
>ref|XM_872923.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2R 2, transcript variant 3 (LOC537885), mRNA Length = 1126 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||||||||||||||| ||||||||||| Sbjct: 118 caggtggatgaagaattgaaatgcatac 91
>ref|XM_843428.1| PREDICTED: Canis familiaris similar to ubiquitin-conjugating enzyme E2R 2 (LOC612749), mRNA Length = 1487 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||||||||||||||| ||||||||||| Sbjct: 310 caggtggatgaagaatcgaaatgcatac 283
>ref|XM_718691.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03603) partial mRNA Length = 234 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 462 ccatccggataaacattaggatgccacatttc 493 ||||| ||||||||||| |||||||||||||| Sbjct: 185 ccatcaggataaacatttggatgccacatttc 154
>ref|XM_661132.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.10053) partial mRNA Length = 276 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 462 ccatccggataaacattaggatgccacatttc 493 ||||| ||||| |||||||||||||||||||| Sbjct: 13 ccatcaggatatacattaggatgccacatttc 44
>gb|AY261360.1| African swine fever virus isolate Kenya 1950, complete genome Length = 193886 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 444 atagaaatgcatacccgcccatccggataaacattaggatgccacatttca 494 ||||| ||||||| | |||||| ||||| | ||||||||||||||||||| Sbjct: 178555 atagagatgcatagtctcccatcaggatagatattaggatgccacatttca 178605
>ref|XM_673209.1| Plasmodium berghei strain ANKA ubiquitin conjugating enzyme E2, (PB000442.00.0) partial mRNA Length = 489 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 468 ggataaacattaggatgccacatttc 493 ||||||||||| |||||||||||||| Sbjct: 248 ggataaacatttggatgccacatttc 223
>gb|BC101493.1| Homo sapiens endoplasmic reticulum protein 29, transcript variant 1, mRNA (cDNA clone MGC:126542 IMAGE:8068999), complete cds Length = 881 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 280 cttgaactcatcctgcttctc 260
>gb|BC101495.1| Homo sapiens endoplasmic reticulum protein 29, transcript variant 1, mRNA (cDNA clone MGC:126544 IMAGE:8069001), complete cds Length = 875 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 280 cttgaactcatcctgcttctc 260
>ref|NM_006817.3| Homo sapiens endoplasmic reticulum protein 29 (ERP29), transcript variant 1, mRNA Length = 1472 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 340 cttgaactcatcctgcttctc 320
>gb|M77121.1|ASVI226R African swine fever virus I226R protein, put. transcription factor (I243L), I73R protein, I329L protein, I78R protein, put. ubiquitin conjugation protein (I215L), I177L protein, I196L protein (I196L) genes, complete cds Length = 6004 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 462 ccatccggataaacattaggatgccacatttca 494 ||||| || |||| ||||||||||||||||||| Sbjct: 4053 ccatcagggtaaatattaggatgccacatttca 4085
>ref|XM_864044.1| PREDICTED: Bos taurus similar to endoplasmic reticulum protein 29 precursor (LOC613357), mRNA Length = 1217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 347 cttgaactcatcctgcttctc 327
>gb|AY261366.1| African swine fever virus isolate Warthog, complete genome Length = 186528 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 462 ccatccggataaacattaggatgccacatttca 494 ||||| || |||| ||||||||||||||||||| Sbjct: 170822 ccatcagggtaaatattaggatgccacatttca 170854
>gb|AY261365.1| African swine fever virus isolate Warmbaths, complete genome Length = 190773 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 462 ccatccggataaacattaggatgccacatttca 494 ||||| || |||| ||||||||||||||||||| Sbjct: 174117 ccatcagggtaaatattaggatgccacatttca 174149
>gb|AC146033.2| Pan troglodytes BAC clone RP43-14B18 from 7, complete sequence Length = 170094 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 cctgcttctctctccagtcct 292 ||||||||||||||||||||| Sbjct: 156936 cctgcttctctctccagtcct 156956
>gb|AC124544.4| Mus musculus BAC clone RP23-266K17 from 8, complete sequence Length = 150266 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 actcatcctgcttctctctcc 286 ||||||||||||||||||||| Sbjct: 62666 actcatcctgcttctctctcc 62686
>gb|AC006463.4| Homo sapiens BAC clone RP11-395G17 from 7, complete sequence Length = 120984 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 cctgcttctctctccagtcct 292 ||||||||||||||||||||| Sbjct: 12788 cctgcttctctctccagtcct 12768
>gb|DQ148252.1| Macaca mulatta clone sl1_e22_t7_490 ERp28 protein (C12orf8) mRNA, partial cds Length = 479 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 31 cttgaactcatcctgcttctc 11
>gb|DQ148154.1| Macaca mulatta clone sl1_a03_t7_369 endoplasmic reticulum lumenal protein ERP28 (ERP28) mRNA, partial cds Length = 476 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 31 cttgaactcatcctgcttctc 11
>emb|X94910.1|HSERP28 Homo sapiens mRNA for ERp28 protein Length = 892 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 233 cttgaactcatcctgcttctc 213
>emb|AL445065.1|TACID3 Thermoplasma acidophilum complete genome; segment 3/5 Length = 316900 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 ctaaccttcttcttgaactcatcct 274 |||||||||||||||| |||||||| Sbjct: 45469 ctaaccttcttcttgatctcatcct 45493
>emb|CR625433.1| full-length cDNA clone CS0DK008YM02 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1203 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 333 cttgaactcatcctgcttctc 313
>emb|CR623789.1| full-length cDNA clone CS0DI079YL05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1375 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 247 cttgaactcatcctgcttctc 227
>emb|CR617833.1| full-length cDNA clone CS0DL010YA17 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1139 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 242 cttgaactcatcctgcttctc 222
>emb|CR617687.1| full-length cDNA clone CS0DL001YK02 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1111 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 229 cttgaactcatcctgcttctc 209
>emb|CR611287.1| full-length cDNA clone CS0DI072YH08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1119 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 247 cttgaactcatcctgcttctc 227
>emb|CR604444.1| full-length cDNA clone CS0DI043YB01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1111 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 229 cttgaactcatcctgcttctc 209
>emb|CR603906.1| full-length cDNA clone CS0DH002YC21 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1110 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 229 cttgaactcatcctgcttctc 209
>emb|CR602804.1| full-length cDNA clone CS0DC009YD12 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1119 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 229 cttgaactcatcctgcttctc 209
>emb|CR602432.1| full-length cDNA clone CS0DF036YH02 of Fetal brain of Homo sapiens (human) Length = 1062 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 229 cttgaactcatcctgcttctc 209
>emb|CR600542.1| full-length cDNA clone CS0DI006YC12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1152 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 292 cttgaactcatcctgcttctc 272
>emb|CR594614.1| full-length cDNA clone CS0DJ008YF23 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1058 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 219 cttgaactcatcctgcttctc 199
>gb|AC069307.7| Homo sapiens BAC clone RP11-738E22 from 4, complete sequence Length = 203474 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 tctctctccagtcctttgctg 298 ||||||||||||||||||||| Sbjct: 51863 tctctctccagtcctttgctg 51883
>emb|CR541667.1| Homo sapiens full open reading frame cDNA clone RZPDo834E0727D for gene C12orf8, chromosome 12 open reading frame 8; complete cds, incl. stopcodon Length = 786 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 222 cttgaactcatcctgcttctc 202
>gb|AC073575.30| Homo sapiens 12 PAC RP1-267L14 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 173718 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 cttgaactcatcctgcttctc 281 ||||||||||||||||||||| Sbjct: 161250 cttgaactcatcctgcttctc 161270
>emb|AL928641.14| Mouse DNA sequence from clone RP23-272N6 on chromosome 2, complete sequence Length = 153467 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 gagaagtgaaattgctagtgt 134 ||||||||||||||||||||| Sbjct: 91327 gagaagtgaaattgctagtgt 91307
>gb|AC133195.4| Mus musculus BAC clone RP23-133F6 from 8, complete sequence Length = 214318 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 actcatcctgcttctctctcc 286 ||||||||||||||||||||| Sbjct: 5145 actcatcctgcttctctctcc 5165
>gb|U18466.1|ASU18466 African swine fever virus, complete genome Length = 170101 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 462 ccatccggataaacattaggatgccacatttca 494 ||||| || |||| ||||||||||||||||||| Sbjct: 157367 ccatcagggtaaatattaggatgccacatttca 157399
>ref|XM_520535.1| PREDICTED: Pan troglodytes similar to ubiquitin-conjugating enzyme E2-32k (LOC465050), mRNA Length = 1231 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 745 caggcggatgaagaatcgaaatgcatac 718
>ref|XM_422648.1| PREDICTED: Gallus gallus similar to ubiquitin-conjugating enzyme E2G 2; ubiquitin-conjugating enzyme 7 homolog (LOC424837), mRNA Length = 667 Score = 40.1 bits (20), Expect = 7.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 407 ctcgtatccgttgggatcatcaccaggtggatgaagaatagaaatgca 454 ||||||||| |||||||||| ||||| | ||||||||||| ||||| Sbjct: 399 ctcgtatcccatgggatcatccccaggagcgtgaagaatagagatgca 352
>ref|XM_864424.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans), transcript variant 2 (LOC613676), mRNA Length = 2063 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 tgaagaatagaaatgcatac 457 |||||||||||||||||||| Sbjct: 639 tgaagaatagaaatgcatac 620
>ref|XM_872974.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans), transcript variant 5 (LOC613676), mRNA Length = 1806 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 tgaagaatagaaatgcatac 457 |||||||||||||||||||| Sbjct: 382 tgaagaatagaaatgcatac 363
>ref|XM_872892.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans), transcript variant 4 (LOC613676), mRNA Length = 1619 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 tgaagaatagaaatgcatac 457 |||||||||||||||||||| Sbjct: 195 tgaagaatagaaatgcatac 176
>ref|XM_872790.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans), transcript variant 3 (LOC613676), mRNA Length = 1916 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 tgaagaatagaaatgcatac 457 |||||||||||||||||||| Sbjct: 492 tgaagaatagaaatgcatac 473
>gb|BC004862.2| Homo sapiens ubiquitin-conjugating enzyme E2R 2, mRNA (cDNA clone MGC:10481 IMAGE:3838157), complete cds Length = 1345 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 482 caggcggatgaagaatcgaaatgcatac 455
>ref|NM_017811.3| Homo sapiens ubiquitin-conjugating enzyme E2R 2 (UBE2R2), mRNA Length = 4457 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 875 caggcggatgaagaatcgaaatgcatac 848
>gb|AY261364.1| African swine fever virus isolate Tengani 62, complete genome Length = 185689 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 taaacattaggatgccacatttca 494 |||| ||||||||||||||||||| Sbjct: 169508 taaatattaggatgccacatttca 169531
>ref|XM_001002125.1| PREDICTED: Mus musculus ubiquitin-conjugating enzyme E2R 2 (Ube2r2), mRNA Length = 3123 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 151 caggcggatgaagaattgaaatgcatac 124
>ref|XM_849513.1| PREDICTED: Canis familiaris similar to ubiquitin-conjugating enzyme E2R 2 (LOC611799), mRNA Length = 3117 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 532 caggcggatgaagaatcgaaatgcatac 505
>gb|BC028294.1| Homo sapiens mRNA similar to keratin 1 (epidermolytic hyperkeratosis) (cDNA clone IMAGE:4779138) Length = 3114 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 379 caggcggatgaagaatcgaaatgcatac 352
>emb|AL732583.5| Human DNA sequence from clone XX-111B on chromosome 1 Contains a novel gene (KIAA1720) and a CpG island, complete sequence Length = 24695 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 tgcttctctctccagtcctt 293 |||||||||||||||||||| Sbjct: 15972 tgcttctctctccagtcctt 15953
>emb|AL139113.21| Human DNA sequence from clone RP11-176F3 on chromosome 9 Contains the 3' end of the PRSS3 gene for serine protease 3 (mesotrypsin) (MTG, TRY3, TRY4, PRSS4), the 5' end of a novel gene, two novel pseudogenes, a DC2 protein pseudogene, the UBC3B gene for ubiquitin-conjugating enzyme, two novel genes, the 3' end of a novel gene (KIAA1491, FLJ22435, FLJ21704, FLJ22148, FLJ33002) and a CpG island, complete sequence Length = 193280 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 103513 caggcggatgaagaatcgaaatgcatac 103486
>emb|CR457233.1| Homo sapiens full open reading frame cDNA clone RZPDo834B049D for gene UBE2R2, ubiquitin-conjugating enzyme E2R 2; complete cds, incl. stopcodon Length = 717 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 301 caggcggatgaagaatcgaaatgcatac 274
>gb|BC047584.1| Homo sapiens ubiquitin-conjugating enzyme E2R 2, mRNA (cDNA clone MGC:48413 IMAGE:4827644), complete cds Length = 1913 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 731 caggcggatgaagaatcgaaatgcatac 704
>emb|AJ240087.1|HSA240087 Homo sapiens mRNA for ubiquitin-coniugating enzyme Length = 1204 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 306 caggcggatgaagaatcgaaatgcatac 279
>emb|AJ240086.1|MMU240086 Mus musculus mRNA for ubiquitin coniugating enzyme 3b Length = 1198 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 309 caggcggatgaagaattgaaatgcatac 282
>gb|AC007922.13| Homo sapiens chromosome 18, clone RP11-178F10, complete sequence Length = 140555 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 tcctgcttctctctccagtc 290 |||||||||||||||||||| Sbjct: 128489 tcctgcttctctctccagtc 128508
>gb|AC023983.11| Homo sapiens chromosome 18, clone RP11-621L6, complete sequence Length = 190225 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 tcctgcttctctctccagtc 290 |||||||||||||||||||| Sbjct: 173293 tcctgcttctctctccagtc 173274
>gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, complete sequence Length = 172865 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 cattttattcagagcatttc 227 |||||||||||||||||||| Sbjct: 163846 cattttattcagagcatttc 163865
>dbj|AK003550.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110007L03 product:UBIQUITIN-CONJUGATING ENZYME E2-32 KDA COMPLEMENTING (EC 6.3.2.19) (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2-CDC34) homolog [Oryctolagus cuniculus], full insert sequence Length = 1210 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 370 caggcggatgaagaattgaaatgcatac 343
>dbj|AK007517.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810015O10 product:UBIQUITIN-CONJUGATING ENZYME E2-32 KDA COMPLEMENTING (EC 6.3.2.19) (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2-CDC34) homolog [Oryctolagus cuniculus], full insert sequence Length = 1325 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 484 caggcggatgaagaattgaaatgcatac 457
>dbj|AK075714.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched library, clone:1300006A07 product:UBIQUITIN-CONJUGATING ENZYME E2-32 KDA COMPLEMENTING (EC 6.3.2.19) (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2-CDC34) homolog [Oryctolagus cuniculus], full insert sequence Length = 3314 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 351 caggcggatgaagaattgaaatgcatac 324
>dbj|AK075703.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200003M11 product:UBIQUITIN-CONJUGATING ENZYME E2-32 KDA COMPLEMENTING (EC 6.3.2.19) (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2-CDC34) homolog [Oryctolagus cuniculus], full insert sequence Length = 1567 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 360 caggcggatgaagaattgaaatgcatac 333
>gb|AC009275.8| Homo sapiens chromosome 7 clone RP11-38M8, complete sequence Length = 154406 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cctgcttctctctccagtcc 291 |||||||||||||||||||| Sbjct: 91329 cctgcttctctctccagtcc 91348
>gb|AY261362.1| African swine fever virus isolate Mkuzi 1979, complete genome Length = 192714 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 taaacattaggatgccacatttca 494 |||| ||||||||||||||||||| Sbjct: 176130 taaatattaggatgccacatttca 176153
>gb|AY830100.1| Phytophthora infestans copia-like retrotransposon CopiaPi-3, complete sequence Length = 5469 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 cttcttcttgaactcatcctgcttctct 282 ||||||||||||||| || ||||||||| Sbjct: 446 cttcttcttgaactcctcttgcttctct 419
>dbj|AK000426.1| Homo sapiens cDNA FLJ20419 fis, clone KAT02435 Length = 1673 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 492 caggcggatgaagaatcgaaatgcatac 465
>gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, complete sequence Length = 198851 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 acaattacaacaaccaggccctta 41 ||||||||||||| |||||||||| Sbjct: 197689 acaattacaacaagcaggccctta 197666
>gb|BC011112.1| Mus musculus ubiquitin-conjugating enzyme E2R 2, mRNA (cDNA clone MGC:19259 IMAGE:3982808), complete cds Length = 1246 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 358 caggcggatgaagaattgaaatgcatac 331
>emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-99L13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 178433 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 attaggatgccacatttcaa 495 |||||||||||||||||||| Sbjct: 96083 attaggatgccacatttcaa 96064
>gb|AC115692.6| Mus musculus chromosome 18, clone RP23-463G11, complete sequence Length = 227631 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 acaattacaacaaccaggccctta 41 ||||||||||||| |||||||||| Sbjct: 99631 acaattacaacaagcaggccctta 99654
>emb|AL807823.6| Mouse DNA sequence from clone RP23-328E6 on chromosome 4, complete sequence Length = 216239 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 212715 caggcggatgaagaattgaaatgcatac 212742
>ref|NM_026275.2| Mus musculus ubiquitin-conjugating enzyme E2R 2 (Ube2r2), mRNA Length = 3314 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 351 caggcggatgaagaattgaaatgcatac 324
>gb|U58652.1|OCU58652 Oryctolagus cuniculus ubiquitin-conjugating enzyme E2-32k mRNA, partial cds Length = 961 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 caggtggatgaagaatagaaatgcatac 457 |||| ||||||||||| ||||||||||| Sbjct: 337 caggcggatgaagaatcgaaatgcatac 310 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,000,141 Number of Sequences: 3902068 Number of extensions: 5000141 Number of successful extensions: 92694 Number of sequences better than 10.0: 125 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92396 Number of HSP's gapped (non-prelim): 250 length of query: 566 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 543 effective length of database: 17,143,297,704 effective search space: 9308810653272 effective search space used: 9308810653272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)