ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd0d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_467558.1| Oryza sativa (japonica cultivar-group), mRNA 68 4e-08
2ref|XM_506948.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 4e-08
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
4dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
5dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
6dbj|AK104276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
7dbj|AK071759.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
8gb|AY111756.1| Zea mays CL26659_-2 mRNA sequence 66 2e-07
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.55
10gb|AY190962.1| Drosophila willistoni clone DWIF01_6_P12 (D1474) ... 44 0.55
11dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.55
12emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chro... 44 0.55
13gb|AC012650.9| Drosophila melanogaster clone BACN24N09, complete... 42 2.2
14gb|AC092189.3| Drosophila melanogaster clone BACR34M11, complete... 42 2.2
15gb|AF503449.1| Danio rerio TATA-binding protein (TBP) mRNA, comp... 42 2.2
16gb|AY168633.1| Danio rerio TATA-binding protein (TBP) mRNA, comp... 42 2.2
17gb|AC115986.3| Homo sapiens chromosome 18, clone RP11-112C14, co... 42 2.2
18gb|AC022743.7| Homo sapiens chromosome 18, clone RP11-789C7, com... 42 2.2
19ref|NM_134557.1| Drosophila melanogaster CG1379-RA (CG1379), mRNA 42 2.2
20gb|AC161887.5| Mus musculus 6 BAC RP23-75P5 (Roswell Park Cancer... 42 2.2
21gb|AC008310.5|AC008310 Drosophila melanogaster, chromosome 3R, r... 42 2.2
22gb|AC007469.7|AC007469 Drosophila melanogaster, chromosome 3R, r... 42 2.2
23gb|AC100738.8| Mus musculus chromosome 15, clone RP24-362K21, co... 42 2.2
24gb|AC158685.4| Mus musculus 6 BAC RP23-284D11 (Roswell Park Canc... 42 2.2
25gb|AE003779.2| Drosophila melanogaster chromosome 3R, section 11... 42 2.2
26gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 ... 42 2.2
27gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 ... 42 2.2
28dbj|AK116673.1| Ciona intestinalis cDNA, clone:cicl031p12, full ... 42 2.2
29gb|AC003055.1|AC003055 Drosophila melanogaster (P1 DS06332 (D91)... 42 2.2
30gb|AC119670.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
31gb|AC127306.3| Mus musculus BAC clone RP23-290H17 from chromosom... 40 8.6
32gb|AC110262.12| Mus musculus chromosome 17, clone RP23-291L10, c... 40 8.6
33emb|CR790381.6| Zebrafish DNA sequence from clone DKEY-202K24 in... 40 8.6
34gb|AC122821.4| Mus musculus BAC clone RP23-201I4 from chromosome... 40 8.6
35gb|AC146329.19| Medicago truncatula clone mth2-5i21, complete se... 40 8.6
36emb|AL590287.8| Human DNA sequence from clone RP11-378C6 on chro... 40 8.6
37ref|XM_502601.1| Yarrowia lipolytica CLIB122, YALI0D09042g predi... 40 8.6
38gb|AC102542.8| Mus musculus, clone RP23-110O23, complete sequence 40 8.6
39ref|XM_968841.1| PREDICTED: Tribolium castaneum similar to High ... 40 8.6
40emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segmen... 40 8.6
41gb|AC055758.23| Homo sapiens 3 BAC RP11-88H10 (Roswell Park Canc... 40 8.6
42gb|AC103853.2| Homo sapiens chromosome 8, clone RP11-642D21, com... 40 8.6
43gb|AC010017.5| Drosophila melanogaster 3L BAC RP98-2C22 (Roswell... 40 8.6
44gb|AC010055.6| Drosophila melanogaster 3L BAC RP98-24H3 (Roswell... 40 8.6
45ref|NM_168237.1| Drosophila melanogaster PAR-domain protein 1 CG... 40 8.6
46ref|NM_141028.1| Drosophila melanogaster CG12977-RA (CG12977), mRNA 40 8.6
47ref|NM_134961.1| Drosophila melanogaster CG10019-RA (CG10019), mRNA 40 8.6
48dbj|AK137850.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 8.6
49dbj|AK137778.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 8.6
50gb|AC091225.2| Drosophila melanogaster 3L BAC RP98-34B24 (Roswel... 40 8.6
51gb|AY070526.1| Drosophila melanogaster GH27708 full length cDNA 40 8.6
52gb|AC092240.1|AC092240 Drosophila melanogaster, chromosome 2L, r... 40 8.6
53dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
54gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 8.6
55gb|AC154682.2| Mus musculus BAC clone RP24-315N18 from chromosom... 40 8.6
56gb|BT024351.1| Drosophila melanogaster IP09244 full insert cDNA 40 8.6
57gb|AC010183.6| Homo sapiens 12 BAC RP11-100F15 (Roswell Park Can... 40 8.6
58gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74... 40 8.6
59gb|AE003578.3| Drosophila melanogaster chromosome 2L, section 13... 40 8.6
60gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28... 40 8.6
61dbj|AP005354.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.6
62gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
63gb|AC005149.1|AC005149 Drosophila melanogaster DNA sequence (P1s... 40 8.6
64emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 8.6

>ref|XM_467558.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1454

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                        
Query: 233  cttgtagcacctgaaagcggcgaacgccgttgcagcagcggcaacaacagcaagagtggt 292
            |||||||  |||||||||| ||||| ||| ||||||||| ||||||| | ||||||  | 
Sbjct: 1287 cttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcagc 1228

                                                      
Query: 293  gtaggtgtcagacctgtcccaggtctcaaaccaggtgggcat 334
             |||||||||| | | ||||| |||||||||||||| |||||
Sbjct: 1227 ataggtgtcagccgtttcccatgtctcaaaccaggttggcat 1186



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 69/80 (86%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                        
Query: 449  tggcagatcactttggcagcaggttaaccctcctccattgccctggcagcatccacctgc 508
            |||||||||||| ||||||||||| || |||||   ||||||||||||||| ||||||||
Sbjct: 1077 tggcagatcactctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgc 1021

                                
Query: 509  aggtgtagggttgcaagcag 528
            ||    ||||||||||||||
Sbjct: 1020 agcgacagggttgcaagcag 1001



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                        
Query: 118  tatgcacaagcagtatattattcccaaatcagattgttttactgcggtagtctgtcgttg 177
            |||||||| | |||||||||||| || | |||| |||||||| || |||| ||||| || 
Sbjct: 1391 tatgcacacgtagtatattattctcacagcagactgttttacagcagtagactgtcctta 1332

                                       
Query: 178  gtgcacaaaacctggccttgttttgag 204
            ||||||||||||| ||| |||| ||||
Sbjct: 1331 gtgcacaaaacctagccctgttctgag 1305



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>ref|XM_506948.1| PREDICTED Oryza sativa (japonica cultivar-group), P0685G12.41 mRNA
          Length = 1611

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                        
Query: 233  cttgtagcacctgaaagcggcgaacgccgttgcagcagcggcaacaacagcaagagtggt 292
            |||||||  |||||||||| ||||| ||| ||||||||| ||||||| | ||||||  | 
Sbjct: 1286 cttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcagc 1227

                                                      
Query: 293  gtaggtgtcagacctgtcccaggtctcaaaccaggtgggcat 334
             |||||||||| | | ||||| |||||||||||||| |||||
Sbjct: 1226 ataggtgtcagccgtttcccatgtctcaaaccaggttggcat 1185



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 69/80 (86%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                        
Query: 449  tggcagatcactttggcagcaggttaaccctcctccattgccctggcagcatccacctgc 508
            |||||||||||| ||||||||||| || |||||   ||||||||||||||| ||||||||
Sbjct: 1076 tggcagatcactctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgc 1020

                                
Query: 509  aggtgtagggttgcaagcag 528
            ||    ||||||||||||||
Sbjct: 1019 agcgacagggttgcaagcag 1000



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                        
Query: 118  tatgcacaagcagtatattattcccaaatcagattgttttactgcggtagtctgtcgttg 177
            |||||||| | |||||||||||| || | |||| |||||||| || |||| ||||| || 
Sbjct: 1390 tatgcacacgtagtatattattctcacagcagactgttttacagcagtagactgtcctta 1331

                                       
Query: 178  gtgcacaaaacctggccttgttttgag 204
            ||||||||||||| ||| |||| ||||
Sbjct: 1330 gtgcacaaaacctagccctgttctgag 1304



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 69/80 (86%), Gaps = 3/80 (3%)
 Strand = Plus / Plus

                                                                            
Query: 449      tggcagatcactttggcagcaggttaaccctcctccattgccctggcagcatccacctgc 508
                |||||||||||| ||||||||||| || |||||   ||||||||||||||| ||||||||
Sbjct: 30158781 tggcagatcactctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgc 30158837

                                    
Query: 509      aggtgtagggttgcaagcag 528
                ||    ||||||||||||||
Sbjct: 30158838 agcgacagggttgcaagcag 30158857



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                            
Query: 233      cttgtagcacctgaaagcggcgaacgccgttgcagcagcggcaacaacagcaagagtggt 292
                |||||||  |||||||||| ||||| ||| ||||||||| ||||||| | ||||||  | 
Sbjct: 30158571 cttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcagc 30158630

                                                          
Query: 293      gtaggtgtcagacctgtcccaggtctcaaaccaggtgggcat 334
                 |||||||||| | | ||||| |||||||||||||| |||||
Sbjct: 30158631 ataggtgtcagccgtttcccatgtctcaaaccaggttggcat 30158672



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                            
Query: 118      tatgcacaagcagtatattattcccaaatcagattgttttactgcggtagtctgtcgttg 177
                |||||||| | |||||||||||| || | |||| |||||||| || |||| ||||| || 
Sbjct: 30158467 tatgcacacgtagtatattattctcacagcagactgttttacagcagtagactgtcctta 30158526

                                           
Query: 178      gtgcacaaaacctggccttgttttgag 204
                ||||||||||||| ||| |||| ||||
Sbjct: 30158527 gtgcacaaaacctagccctgttctgag 30158553



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>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0685G12
          Length = 149155

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 69/80 (86%), Gaps = 3/80 (3%)
 Strand = Plus / Plus

                                                                          
Query: 449    tggcagatcactttggcagcaggttaaccctcctccattgccctggcagcatccacctgc 508
              |||||||||||| ||||||||||| || |||||   ||||||||||||||| ||||||||
Sbjct: 138378 tggcagatcactctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgc 138434

                                  
Query: 509    aggtgtagggttgcaagcag 528
              ||    ||||||||||||||
Sbjct: 138435 agcgacagggttgcaagcag 138454



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                          
Query: 233    cttgtagcacctgaaagcggcgaacgccgttgcagcagcggcaacaacagcaagagtggt 292
              |||||||  |||||||||| ||||| ||| ||||||||| ||||||| | ||||||  | 
Sbjct: 138168 cttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcagc 138227

                                                        
Query: 293    gtaggtgtcagacctgtcccaggtctcaaaccaggtgggcat 334
               |||||||||| | | ||||| |||||||||||||| |||||
Sbjct: 138228 ataggtgtcagccgtttcccatgtctcaaaccaggttggcat 138269



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                          
Query: 118    tatgcacaagcagtatattattcccaaatcagattgttttactgcggtagtctgtcgttg 177
              |||||||| | |||||||||||| || | |||| |||||||| || |||| ||||| || 
Sbjct: 138064 tatgcacacgtagtatattattctcacagcagactgttttacagcagtagactgtcctta 138123

                                         
Query: 178    gtgcacaaaacctggccttgttttgag 204
              ||||||||||||| ||| |||| ||||
Sbjct: 138124 gtgcacaaaacctagccctgttctgag 138150



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>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_G07
          Length = 93240

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 69/80 (86%), Gaps = 3/80 (3%)
 Strand = Plus / Plus

                                                                         
Query: 449   tggcagatcactttggcagcaggttaaccctcctccattgccctggcagcatccacctgc 508
             |||||||||||| ||||||||||| || |||||   ||||||||||||||| ||||||||
Sbjct: 31485 tggcagatcactctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgc 31541

                                 
Query: 509   aggtgtagggttgcaagcag 528
             ||    ||||||||||||||
Sbjct: 31542 agcgacagggttgcaagcag 31561



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                         
Query: 233   cttgtagcacctgaaagcggcgaacgccgttgcagcagcggcaacaacagcaagagtggt 292
             |||||||  |||||||||| ||||| ||| ||||||||| ||||||| | ||||||  | 
Sbjct: 31275 cttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcagc 31334

                                                       
Query: 293   gtaggtgtcagacctgtcccaggtctcaaaccaggtgggcat 334
              |||||||||| | | ||||| |||||||||||||| |||||
Sbjct: 31335 ataggtgtcagccgtttcccatgtctcaaaccaggttggcat 31376



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                         
Query: 118   tatgcacaagcagtatattattcccaaatcagattgttttactgcggtagtctgtcgttg 177
             |||||||| | |||||||||||| || | |||| |||||||| || |||| ||||| || 
Sbjct: 31171 tatgcacacgtagtatattattctcacagcagactgttttacagcagtagactgtcctta 31230

                                        
Query: 178   gtgcacaaaacctggccttgttttgag 204
             ||||||||||||| ||| |||| ||||
Sbjct: 31231 gtgcacaaaacctagccctgttctgag 31257



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>dbj|AK104276.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-A01, full
            insert sequence
          Length = 1454

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                        
Query: 233  cttgtagcacctgaaagcggcgaacgccgttgcagcagcggcaacaacagcaagagtggt 292
            |||||||  |||||||||| ||||| ||| ||||||||| ||||||| | ||||||  | 
Sbjct: 1287 cttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcagc 1228

                                                      
Query: 293  gtaggtgtcagacctgtcccaggtctcaaaccaggtgggcat 334
             |||||||||| | | ||||| |||||||||||||| |||||
Sbjct: 1227 ataggtgtcagccgtttcccatgtctcaaaccaggttggcat 1186



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 69/80 (86%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                        
Query: 449  tggcagatcactttggcagcaggttaaccctcctccattgccctggcagcatccacctgc 508
            |||||||||||| ||||||||||| || |||||   ||||||||||||||| ||||||||
Sbjct: 1077 tggcagatcactctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgc 1021

                                
Query: 509  aggtgtagggttgcaagcag 528
            ||    ||||||||||||||
Sbjct: 1020 agcgacagggttgcaagcag 1001



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                        
Query: 118  tatgcacaagcagtatattattcccaaatcagattgttttactgcggtagtctgtcgttg 177
            |||||||| | |||||||||||| || | |||| |||||||| || |||| ||||| || 
Sbjct: 1391 tatgcacacgtagtatattattctcacagcagactgttttacagcagtagactgtcctta 1332

                                       
Query: 178  gtgcacaaaacctggccttgttttgag 204
            ||||||||||||| ||| |||| ||||
Sbjct: 1331 gtgcacaaaacctagccctgttctgag 1305



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>dbj|AK071759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109C03, full
            insert sequence
          Length = 1611

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                        
Query: 233  cttgtagcacctgaaagcggcgaacgccgttgcagcagcggcaacaacagcaagagtggt 292
            |||||||  |||||||||| ||||| ||| ||||||||| ||||||| | ||||||  | 
Sbjct: 1286 cttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcagc 1227

                                                      
Query: 293  gtaggtgtcagacctgtcccaggtctcaaaccaggtgggcat 334
             |||||||||| | | ||||| |||||||||||||| |||||
Sbjct: 1226 ataggtgtcagccgtttcccatgtctcaaaccaggttggcat 1185



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 69/80 (86%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                        
Query: 449  tggcagatcactttggcagcaggttaaccctcctccattgccctggcagcatccacctgc 508
            |||||||||||| ||||||||||| || |||||   ||||||||||||||| ||||||||
Sbjct: 1076 tggcagatcactctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgc 1020

                                
Query: 509  aggtgtagggttgcaagcag 528
            ||    ||||||||||||||
Sbjct: 1019 agcgacagggttgcaagcag 1000



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                        
Query: 118  tatgcacaagcagtatattattcccaaatcagattgttttactgcggtagtctgtcgttg 177
            |||||||| | |||||||||||| || | |||| |||||||| || |||| ||||| || 
Sbjct: 1390 tatgcacacgtagtatattattctcacagcagactgttttacagcagtagactgtcctta 1331

                                       
Query: 178  gtgcacaaaacctggccttgttttgag 204
            ||||||||||||| ||| |||| ||||
Sbjct: 1330 gtgcacaaaacctagccctgttctgag 1304



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>gb|AY111756.1| Zea mays CL26659_-2 mRNA sequence
          Length = 669

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 278 aacagcaagagtggtgtaggtgtcagacctgtcccaggtctcaaaccaggtgggcatccg 337
           |||||||||||  |  ||||||||||  || ||||||||||||||||||||||||||| |
Sbjct: 375 aacagcaagagcagcataggtgtcagctctctcccaggtctcaaaccaggtgggcatcgg 434

                    
Query: 338 gcaaatctt 346
           |||| ||||
Sbjct: 435 gcaagtctt 443



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 516      gggttgcaagcagcagcaccgt 537
                ||||||||||||||||||||||
Sbjct: 20715824 gggttgcaagcagcagcaccgt 20715803



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>gb|AY190962.1| Drosophila willistoni clone DWIF01_6_P12 (D1474) genomic sequence
          Length = 41651

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 264   gcagcagcggcaacaacagcaa 285
             ||||||||||||||||||||||
Sbjct: 38303 gcagcagcggcaacaacagcaa 38282



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>dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0479C08
          Length = 152460

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 516   gggttgcaagcagcagcaccgt 537
             ||||||||||||||||||||||
Sbjct: 88277 gggttgcaagcagcagcaccgt 88256



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>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete
             sequence
          Length = 227918

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 547   ttgcttcaggggattctttggc 568
             ||||||||||||||||||||||
Sbjct: 65856 ttgcttcaggggattctttggc 65835



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>gb|AC012650.9| Drosophila melanogaster clone BACN24N09, complete sequence
          Length = 74083

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 265   cagcagcggcaacaacagcaa 285
             |||||||||||||||||||||
Sbjct: 24027 cagcagcggcaacaacagcaa 24047



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>gb|AC092189.3| Drosophila melanogaster clone BACR34M11, complete sequence
          Length = 168540

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 264    gcagcagcggcaacaacagca 284
              |||||||||||||||||||||
Sbjct: 115494 gcagcagcggcaacaacagca 115514



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>gb|AF503449.1| Danio rerio TATA-binding protein (TBP) mRNA, complete cds
          Length = 1743

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 264 gcagcagcggcaacaacagca 284
           |||||||||||||||||||||
Sbjct: 296 gcagcagcggcaacaacagca 316



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>gb|AY168633.1| Danio rerio TATA-binding protein (TBP) mRNA, complete cds
          Length = 1725

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 264 gcagcagcggcaacaacagca 284
           |||||||||||||||||||||
Sbjct: 294 gcagcagcggcaacaacagca 314



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>gb|AC115986.3| Homo sapiens chromosome 18, clone RP11-112C14, complete sequence
          Length = 179590

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 435    tcctgttttgtttctggcaga 455
              |||||||||||||||||||||
Sbjct: 154341 tcctgttttgtttctggcaga 154321



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>gb|AC022743.7| Homo sapiens chromosome 18, clone RP11-789C7, complete sequence
          Length = 182466

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 435    tcctgttttgtttctggcaga 455
              |||||||||||||||||||||
Sbjct: 120887 tcctgttttgtttctggcaga 120907



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>ref|NM_134557.1| Drosophila melanogaster CG1379-RA (CG1379), mRNA
          Length = 1107

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 265 cagcagcggcaacaacagcaa 285
           |||||||||||||||||||||
Sbjct: 504 cagcagcggcaacaacagcaa 524



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>gb|AC161887.5| Mus musculus 6 BAC RP23-75P5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 227751

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 402   ctcctgtgcttctgctcagct 422
             |||||||||||||||||||||
Sbjct: 26855 ctcctgtgcttctgctcagct 26835



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>gb|AC008310.5|AC008310 Drosophila melanogaster, chromosome 3R, region 100C-100D, BAC clone
             BACR16C04, complete sequence
          Length = 159528

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 261   gttgcagcagcggcaacaaca 281
             |||||||||||||||||||||
Sbjct: 73211 gttgcagcagcggcaacaaca 73231



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>gb|AC007469.7|AC007469 Drosophila melanogaster, chromosome 3R, region 100D1-100F2, BAC clone
             BACR48C22, complete sequence
          Length = 181446

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 261   gttgcagcagcggcaacaaca 281
             |||||||||||||||||||||
Sbjct: 22846 gttgcagcagcggcaacaaca 22866



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>gb|AC100738.8| Mus musculus chromosome 15, clone RP24-362K21, complete sequence
          Length = 128950

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 537   ttggttccatttgcttcaggg 557
             |||||||||||||||||||||
Sbjct: 86333 ttggttccatttgcttcaggg 86353



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>gb|AC158685.4| Mus musculus 6 BAC RP23-284D11 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 191856

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 402   ctcctgtgcttctgctcagct 422
             |||||||||||||||||||||
Sbjct: 95119 ctcctgtgcttctgctcagct 95099



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>gb|AE003779.2| Drosophila melanogaster chromosome 3R, section 117 of 118 of the
             complete sequence
          Length = 232050

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 261   gttgcagcagcggcaacaaca 281
             |||||||||||||||||||||
Sbjct: 62118 gttgcagcagcggcaacaaca 62138



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>gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 of 83 of the complete
              sequence
          Length = 303641

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 264    gcagcagcggcaacaacagca 284
              |||||||||||||||||||||
Sbjct: 299203 gcagcagcggcaacaacagca 299223



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>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete
              sequence
          Length = 302538

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 265    cagcagcggcaacaacagcaa 285
              |||||||||||||||||||||
Sbjct: 285241 cagcagcggcaacaacagcaa 285221



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>dbj|AK116673.1| Ciona intestinalis cDNA, clone:cicl031p12, full insert sequence
          Length = 1480

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 265 cagcagcggcaacaacagcaa 285
           |||||||||||||||||||||
Sbjct: 192 cagcagcggcaacaacagcaa 212



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>gb|AC003055.1|AC003055 Drosophila melanogaster (P1 DS06332 (D91)) DNA sequence, complete
             sequence
          Length = 73076

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 264   gcagcagcggcaacaacagca 284
             |||||||||||||||||||||
Sbjct: 40261 gcagcagcggcaacaacagca 40241



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>gb|AC119670.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007H22, complete sequence
          Length = 160938

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 264   gcagcagcggcaacaacagcaaga 287
             |||||||||||||||||| |||||
Sbjct: 43867 gcagcagcggcaacaacaacaaga 43844



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>gb|AC127306.3| Mus musculus BAC clone RP23-290H17 from chromosome 7, complete sequence
          Length = 204478

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   gtgcttctgctcagctggaa 426
             ||||||||||||||||||||
Sbjct: 92502 gtgcttctgctcagctggaa 92483



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>gb|AC110262.12| Mus musculus chromosome 17, clone RP23-291L10, complete sequence
          Length = 210850

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   gctcttgtcctgttttgttt 447
             ||||||||||||||||||||
Sbjct: 13612 gctcttgtcctgttttgttt 13631



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>emb|CR790381.6| Zebrafish DNA sequence from clone DKEY-202K24 in linkage group 3,
             complete sequence
          Length = 93389

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   gctcttgtcctgttttgttt 447
             ||||||||||||||||||||
Sbjct: 27409 gctcttgtcctgttttgttt 27390



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>gb|AC122821.4| Mus musculus BAC clone RP23-201I4 from chromosome 17, complete sequence
          Length = 220013

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   gctcttgtcctgttttgttt 447
             ||||||||||||||||||||
Sbjct: 65008 gctcttgtcctgttttgttt 64989



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>gb|AC146329.19| Medicago truncatula clone mth2-5i21, complete sequence
          Length = 142834

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 454   gatcactttggcagcaggtt 473
             ||||||||||||||||||||
Sbjct: 59203 gatcactttggcagcaggtt 59184



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>emb|AL590287.8| Human DNA sequence from clone RP11-378C6 on chromosome 13, complete
            sequence
          Length = 38013

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 440  ttttgtttctggcagatcac 459
            ||||||||||||||||||||
Sbjct: 2003 ttttgtttctggcagatcac 2022



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>ref|XM_502601.1| Yarrowia lipolytica CLIB122, YALI0D09042g predicted mRNA
          Length = 1386

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 agttcatggccttgtagcac 242
           ||||||||||||||||||||
Sbjct: 934 agttcatggccttgtagcac 915



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>gb|AC102542.8| Mus musculus, clone RP23-110O23, complete sequence
          Length = 270695

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 296    ggtgtcagacctgtcccaggtctc 319
              |||||||||||| |||||||||||
Sbjct: 242717 ggtgtcagacctttcccaggtctc 242740



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>ref|XM_968841.1| PREDICTED: Tribolium castaneum similar to High mobility group protein
            DSP1 (Dorsal switch protein 1) (LOC662763), mRNA
          Length = 2682

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 264  gcagcagcggcaacaacagcaaga 287
            |||||||| |||||||||||||||
Sbjct: 1647 gcagcagcagcaacaacagcaaga 1670



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>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7
          Length = 349213

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 564    ttggcgcttgattcttcctcagtt 587
              |||||| |||||||||||||||||
Sbjct: 103312 ttggcgattgattcttcctcagtt 103289



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>gb|AC055758.23| Homo sapiens 3 BAC RP11-88H10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 173456

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   aaatcagattgttttactgc 162
             ||||||||||||||||||||
Sbjct: 66527 aaatcagattgttttactgc 66546



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>gb|AC103853.2| Homo sapiens chromosome 8, clone RP11-642D21, complete sequence
          Length = 178736

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    ttctttctaaagtcctaacc 105
             ||||||||||||||||||||
Sbjct: 71161 ttctttctaaagtcctaacc 71142



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>gb|AC010017.5| Drosophila melanogaster 3L BAC RP98-2C22 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 182960

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 261    gttgcagcagcggcaacaacagca 284
              ||||||||||| ||||||||||||
Sbjct: 169110 gttgcagcagcagcaacaacagca 169133



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>gb|AC010055.6| Drosophila melanogaster 3L BAC RP98-24H3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163098

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   gttgcagcagcggcaacaacagca 284
             ||||||||||| ||||||||||||
Sbjct: 52555 gttgcagcagcagcaacaacagca 52578



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>ref|NM_168237.1| Drosophila melanogaster PAR-domain protein 1 CG17888-RD, transcript
           variant D (Pdp1), mRNA
          Length = 4704

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 cagcagcggcaacaacagca 284
           ||||||||||||||||||||
Sbjct: 922 cagcagcggcaacaacagca 941



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>ref|NM_141028.1| Drosophila melanogaster CG12977-RA (CG12977), mRNA
          Length = 930

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 261 gttgcagcagcggcaacaacagca 284
           ||||||||||| ||||||||||||
Sbjct: 372 gttgcagcagcagcaacaacagca 395



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>ref|NM_134961.1| Drosophila melanogaster CG10019-RA (CG10019), mRNA
          Length = 3396

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 261  gttgcagcagcggcaacaacagca 284
            ||||||||||| ||||||||||||
Sbjct: 2721 gttgcagcagcagcaacaacagca 2744



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>dbj|AK137850.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130027I17 product:unclassifiable, full
            insert sequence
          Length = 2351

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  gctcttgtcctgttttgttt 447
            ||||||||||||||||||||
Sbjct: 2183 gctcttgtcctgttttgttt 2202



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>dbj|AK137778.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130006I09 product:unclassifiable, full
            insert sequence
          Length = 2352

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  gctcttgtcctgttttgttt 447
            ||||||||||||||||||||
Sbjct: 2184 gctcttgtcctgttttgttt 2203



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>gb|AC091225.2| Drosophila melanogaster 3L BAC RP98-34B24 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 174774

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   cagcagcggcaacaacagca 284
             ||||||||||||||||||||
Sbjct: 73691 cagcagcggcaacaacagca 73672



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>gb|AY070526.1| Drosophila melanogaster GH27708 full length cDNA
          Length = 3095

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 cagcagcggcaacaacagca 284
           ||||||||||||||||||||
Sbjct: 922 cagcagcggcaacaacagca 941



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>gb|AC092240.1|AC092240 Drosophila melanogaster, chromosome 2L, region 24E-24F, BAC clone
             BACR06H02, complete sequence
          Length = 187707

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   gttgcagcagcggcaacaacagca 284
             ||||||||||| ||||||||||||
Sbjct: 44748 gttgcagcagcagcaacaacagca 44771



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 264     gcagcagcggcaacaacagcaaga 287
               |||||||||||||||||| |||||
Sbjct: 6842984 gcagcagcggcaacaacaacaaga 6843007



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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 264     gcagcagcggcaacaacagc 283
               ||||||||||||||||||||
Sbjct: 1980832 gcagcagcggcaacaacagc 1980851



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>gb|AC154682.2| Mus musculus BAC clone RP24-315N18 from chromosome 14, complete sequence
          Length = 171851

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 296    ggtgtcagacctgtcccaggtctc 319
              |||||||||||| |||||||||||
Sbjct: 123807 ggtgtcagacctttcccaggtctc 123784



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>gb|BT024351.1| Drosophila melanogaster IP09244 full insert cDNA
          Length = 1307

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 261 gttgcagcagcggcaacaacagca 284
           ||||||||||| ||||||||||||
Sbjct: 528 gttgcagcagcagcaacaacagca 551



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>gb|AC010183.6| Homo sapiens 12 BAC RP11-100F15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 175504

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   cttcatgcatcccttcttgc 363
             ||||||||||||||||||||
Sbjct: 82860 cttcatgcatcccttcttgc 82841



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>gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74 of 83 of the complete
              sequence
          Length = 313157

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 261    gttgcagcagcggcaacaacagca 284
              ||||||||||| ||||||||||||
Sbjct: 232822 gttgcagcagcagcaacaacagca 232799



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>gb|AE003578.3| Drosophila melanogaster chromosome 2L, section 13 of 83 of the complete
             sequence
          Length = 295211

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   gttgcagcagcggcaacaacagca 284
             ||||||||||| ||||||||||||
Sbjct: 14498 gttgcagcagcagcaacaacagca 14521



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>gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28 of 83 of the complete
             sequence
          Length = 287988

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   cagcagcggcaacaacagca 284
             ||||||||||||||||||||
Sbjct: 67843 cagcagcggcaacaacagca 67824



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>dbj|AP005354.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1159C3, complete
              sequence
          Length = 133276

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     ttctttctaaagtcctaacc 105
              ||||||||||||||||||||
Sbjct: 128472 ttctttctaaagtcctaacc 128491



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 264     gcagcagcggcaacaacagcaaga 287
               |||||||||||||||||| |||||
Sbjct: 6909451 gcagcagcggcaacaacaacaaga 6909474



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>gb|AC005149.1|AC005149 Drosophila melanogaster DNA sequence (P1s DS03364 (D237) and DS02911
             (D145)), complete sequence
          Length = 98942

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   gttgcagcagcggcaacaacagca 284
             ||||||||||| ||||||||||||
Sbjct: 55474 gttgcagcagcagcaacaacagca 55497



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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 223     agttcatggccttgtagcac 242
               ||||||||||||||||||||
Sbjct: 1150198 agttcatggccttgtagcac 1150217


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,044,931
Number of Sequences: 3902068
Number of extensions: 6044931
Number of successful extensions: 109948
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109640
Number of HSP's gapped (non-prelim): 294
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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