Clone Name | rbasd0c12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NDST3_MOUSE (Q9EQH7) Bifunctional heparan sulfate N-deacetylase/... | 28 | 4.6 |
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>NDST3_MOUSE (Q9EQH7) Bifunctional heparan sulfate| N-deacetylase/N-sulfotransferase 3 (EC 2.8.2.8) (Glucosaminyl N-deacetylase/N-sulfotransferase 3) (NDST-3) (N-heparan sulfate sulfotransferase 3) (N-HSST 3) [Includes: Heparan sulfate N-deacetylase 3 (EC Length = 873 Score = 28.5 bits (62), Expect = 4.6 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = -2 Query: 226 HHXICSHASEXSWCRSIITSYCIKHGTICXGINITGHCN 110 + I + + SW RS++ YCI++G G + T N Sbjct: 133 YENILKYINMDSWNRSLLDKYCIEYGVGIIGFHKTSEKN 171 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,828,776 Number of Sequences: 219361 Number of extensions: 452326 Number of successful extensions: 938 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 936 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 938 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)