ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd0c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DB10_NICSY (P46942) ATP-dependent RNA helicase-like protein DB10... 50 5e-06
2DDX17_MOUSE (Q501J6) Probable ATP-dependent RNA helicase DDX17 (... 47 4e-05
3DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (... 47 4e-05
4DDX5_MOUSE (Q61656) Probable ATP-dependent RNA helicase DDX5 (EC... 46 7e-05
5DDX5_HUMAN (P17844) Probable ATP-dependent RNA helicase DDX5 (EC... 46 7e-05
6ROK1_YARLI (Q6CDS6) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-) 46 9e-05
7DED1_ASHGO (Q75B50) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) 44 3e-04
8RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-) 44 3e-04
9DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) 41 0.002
10PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helica... 40 0.004
11PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helica... 40 0.006
12DBP3_SCHPO (Q10202) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-) 40 0.006
13DED1_YEAST (P06634) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)... 39 0.008
14DBP3_NEUCR (Q7S5R1) ATP-dependent RNA helicase dbp-3 (EC 3.6.1.-) 39 0.008
15DDX4_MOUSE (Q61496) Probable ATP-dependent RNA helicase DDX4 (EC... 39 0.008
16PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helica... 39 0.011
17DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) 39 0.011
18VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-)... 39 0.011
19DDX4_HUMAN (Q9NQI0) Probable ATP-dependent RNA helicase DDX4 (EC... 39 0.014
20DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) 39 0.014
21DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-)... 39 0.014
22DDX4_PIG (Q6GWX0) Probable ATP-dependent RNA helicase DDX4 (EC 3... 39 0.014
23DDX4_MACFA (Q4R5S7) Probable ATP-dependent RNA helicase DDX4 (EC... 39 0.014
24DBP3_ASHGO (Q755A5) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-) 39 0.014
25DBP3_KLULA (Q6CT46) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-) 38 0.018
26DED1_CANAL (Q5A4E2) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) 38 0.018
27DED1_SCHPO (O13370) ATP-dependent RNA helicase ded1 (EC 3.6.1.-) 38 0.024
28DBP3_EMENI (Q5AWA6) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-) 38 0.024
29PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helica... 37 0.031
30ROK1_SCHPO (Q09775) ATP-dependent RNA helicase rok1 (EC 3.6.1.-) 37 0.031
31DDX4_RAT (Q64060) Probable ATP-dependent RNA helicase DDX4 (EC 3... 37 0.031
32DED1_ASPFU (Q4WP13) ATP-dependent RNA helicase ded1 (EC 3.6.1.-) 37 0.031
33DBP2_USTMA (Q4PHU9) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) 37 0.041
34ROK1_KLULA (Q6CSW1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-) 37 0.053
35DBP3_USTMA (Q4PDT1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-) 37 0.053
36ROK1_ASHGO (Q75AE1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-) 37 0.053
37ROK1_DEBHA (Q6BP45) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-) 36 0.070
38DED1_ASPOR (Q2UGK3) ATP-dependent RNA helicase ded1 (EC 3.6.1.-) 36 0.070
39ROK1_CANAL (Q9Y7C4) ATP-dependent RNA helicase CHR1 (EC 3.6.1.-) 36 0.091
40DED1_YARLI (Q6CB69) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) 36 0.091
41DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) 36 0.091
42DDX3Y_PONPY (Q5RF43) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.... 35 0.12
43DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.... 35 0.12
44DDX3X_MOUSE (Q62167) ATP-dependent RNA helicase DDX3X (EC 3.6.1.... 35 0.12
45DDX3X_HUMAN (O00571) ATP-dependent RNA helicase DDX3X (EC 3.6.1.... 35 0.12
46DED1_USTMA (Q4P733) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) 35 0.12
47PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase Pl10 (EC... 35 0.12
48DDX3Y_HUMAN (O15523) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.... 35 0.12
49PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helica... 35 0.12
50ROK1_YEAST (P45818) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)... 35 0.12
51PRP11_SCHPO (Q9P7C7) Pre-mRNA-processing ATP-dependent RNA helic... 35 0.16
52DDX52_HUMAN (Q9Y2R4) Probable ATP-dependent RNA helicase DDX52 (... 35 0.16
53AN3_XENLA (P24346) Putative ATP-dependent RNA helicase an3 (EC 3... 35 0.16
54DDX52_RAT (Q99PT0) Probable ATP-dependent RNA helicase DDX52 (EC... 35 0.16
55DDX52_MOUSE (Q8K301) Probable ATP-dependent RNA helicase DDX52 (... 35 0.16
56ROK1_CANGA (Q6FN65) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-) 35 0.16
57DED1_NEUCR (Q9P6U9) ATP-dependent RNA helicase ded-1 (EC 3.6.1.-) 35 0.20
58DBP2_SCHPO (P24782) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)... 35 0.20
59DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-) 34 0.26
60DBP3_ASPFU (Q4WH83) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-) 34 0.35
61DBP3_ASPOR (Q2UMH8) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-) 34 0.35
62DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (... 33 0.45
63DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-) 33 0.45
64DDX3Y_PANTR (Q6GVM6) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.... 33 0.59
65DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) 33 0.59
66DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-) 33 0.77
67GLH3_CAEEL (O01836) ATP-dependent RNA helicase glh-3 (EC 3.6.1.-... 32 1.0
68DBP2_YARLI (Q6C4D4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) 32 1.0
69DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) 32 1.0
70CPNE8_HUMAN (Q86YQ8) Copine-8 (Copine VIII) 32 1.0
71DBP2_CRYNE (Q5KFM6) ATP-dependent RNA helicase DBP2-A (EC 3.6.1.-) 32 1.0
72PRP28_CANAL (Q59W52) Pre-mRNA splicing ATP-dependent RNA helicas... 32 1.3
73GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-... 32 1.3
74GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-... 32 1.3
75DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-) 32 1.3
76YKJ8_YEAST (P34246) Hypothetical 39.8 kDa protein in APE1/LAP4-C... 32 1.7
77HE64_TRYBB (Q26696) Putative DEAD-box RNA helicase HEL64 (EC 3.6... 32 1.7
78DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) 32 1.7
79DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) 32 1.7
80DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) 31 2.9
81RR30_SPIOL (P19954) Plastid-specific 30S ribosomal protein 1, ch... 30 3.8
82DBP2_DEBHA (Q6BY27) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) 30 3.8
83YK82_YEAST (P36170) Hypothetical protein YKR102W precursor 30 5.0
84PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helica... 30 5.0
85GPT_CRILO (P23338) UDP-N-acetylglucosamine--dolichyl-phosphate N... 30 5.0
86GPT_CRIGR (P24140) UDP-N-acetylglucosamine--dolichyl-phosphate N... 30 5.0
87DRS1_YEAST (P32892) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)... 30 5.0
88DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-) 30 5.0
89DRS1_ASHGO (Q75F95) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-) 30 6.5
90DDX56_MOUSE (Q9D0R4) Probable ATP-dependent RNA helicase DDX56 (... 30 6.5
91DBP2_YEAST (P24783) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)... 30 6.5
92DBP7_ASHGO (Q754J2) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-) 30 6.5
93CACB2_HUMAN (Q08289) Voltage-dependent L-type calcium channel be... 30 6.5
94PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helica... 30 6.5
95DBP8_YARLI (Q6C799) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-) 29 8.5
96GPT_MOUSE (P42867) UDP-N-acetylglucosamine--dolichyl-phosphate N... 29 8.5
97DRS1_CANAL (Q5ACK7) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-) 29 8.5
98DDX28_MOUSE (Q9CWT6) Probable ATP-dependent RNA helicase DDX28 (... 29 8.5
99DBP6_DEBHA (Q6BPT8) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-) 29 8.5

>DB10_NICSY (P46942) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-)|
          Length = 607

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
 Frame = -2

Query: 512 DGSQGSTFTVCSSM--GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTA 339
           D SQG    V S    G   VLV    +     +++  +V+  D P   +DYV  + RT 
Sbjct: 422 DKSQGERDYVLSQFRAGRSPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTG 481

Query: 338 RHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLRQLMDK 207
           R   +G  +  FS  D+ HA  L  VL  + Q VP  LR +  +
Sbjct: 482 RAGASGLAYTFFSDQDSKHALDLVKVLEGANQCVPTELRDMASR 525



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>DDX17_MOUSE (Q501J6) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)|
           (DEAD box protein 17)
          Length = 650

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 26/70 (37%), Positives = 38/70 (54%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           VE+ + V+  D P S +DYV  + RTAR T  G  +  F+  +   A+ L  VL  + QA
Sbjct: 405 VEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQA 464

Query: 239 VPKLLRQLMD 210
           +   L QL+D
Sbjct: 465 INPKLMQLVD 474



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>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)|
           (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD
           box protein p72)
          Length = 650

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 26/70 (37%), Positives = 38/70 (54%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           VE+ + V+  D P S +DYV  + RTAR T  G  +  F+  +   A+ L  VL  + QA
Sbjct: 405 VEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQA 464

Query: 239 VPKLLRQLMD 210
           +   L QL+D
Sbjct: 465 INPKLMQLVD 474



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>DDX5_MOUSE (Q61656) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)|
           (DEAD box protein 5) (RNA helicase p68) (DEAD box RNA
           helicase DEAD1) (mDEAD1)
          Length = 614

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           VE+ + V+  D P S +DY+  + RTAR T  G  +  F+  +      L  VL  + QA
Sbjct: 407 VEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQA 466

Query: 239 V-PKLLRQLMDK 207
           + PKLL+ + D+
Sbjct: 467 INPKLLQLVEDR 478



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>DDX5_HUMAN (P17844) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)|
           (DEAD box protein 5) (RNA helicase p68)
          Length = 614

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           VE+ + V+  D P S +DY+  + RTAR T  G  +  F+  +      L  VL  + QA
Sbjct: 407 VEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQA 466

Query: 239 V-PKLLRQLMDK 207
           + PKLL+ + D+
Sbjct: 467 INPKLLQLVEDR 478



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>ROK1_YARLI (Q6CDS6) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)|
          Length = 547

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = -2

Query: 443 CESLATSGVE--EFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPL 270
           C  +   G++     +V+  D+P S   YV  + RT R    G+    F+K DAT+ K +
Sbjct: 420 CTDVLARGIDFRGINLVINYDVPQSAQSYVHRIGRTGRAGRLGKAVTFFTKEDATNVKVV 479

Query: 269 ADVLANSGQAVPKLLRQL 216
            +V+  SGQ VP  L  L
Sbjct: 480 VNVMKQSGQEVPDWLNNL 497



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>DED1_ASHGO (Q75B50) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 623

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 27/85 (31%), Positives = 37/85 (43%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
           G  NVLV    +     +     V+  DLP   DDYV  + RT R    G     F++ +
Sbjct: 451 GRANVLVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGLATAFFNRGN 510

Query: 290 ATHAKPLADVLANSGQAVPKLLRQL 216
               K L D+L  + Q VP  L Q+
Sbjct: 511 KNVVKELVDILEEANQEVPSFLSQI 535



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>RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-)|
          Length = 719

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 26/85 (30%), Positives = 39/85 (45%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
           G  N+LV    +     V+  + V+  D P + +DY+  + RT R    G     F+K +
Sbjct: 579 GKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNN 638

Query: 290 ATHAKPLADVLANSGQAVPKLLRQL 216
           A  AK L DVL  + Q +   L  L
Sbjct: 639 AKQAKALVDVLREANQEINPALENL 663



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>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 627

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
 Frame = -2

Query: 512 DGSQGSTFTVCSSM--GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTA 339
           D +QG      S+   G   +LV    +     +     V+  DLP   DDYV  + RT 
Sbjct: 449 DRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTG 508

Query: 338 RHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLRQLM 213
           R    G     F++ +   AK L  +L+ + Q VP  L  +M
Sbjct: 509 RAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIM 550



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>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
            3.6.1.-)
          Length = 1173

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 23/87 (26%), Positives = 42/87 (48%)
 Frame = -2

Query: 470  GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
            G+  VL+    +     V++ ++V+  D P   +DYV    RT R    G      ++  
Sbjct: 842  GIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQ 901

Query: 290  ATHAKPLADVLANSGQAVPKLLRQLMD 210
              ++  +A  L  SGQ VP+ +++L+D
Sbjct: 902  ERYSVDIAKALKQSGQEVPEAVQKLVD 928



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>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
            3.6.1.-)
          Length = 1186

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 22/87 (25%), Positives = 43/87 (49%)
 Frame = -2

Query: 470  GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
            G+  VL+    +     V++ ++V+  D P   +DYV    RT R    G      ++  
Sbjct: 855  GIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQ 914

Query: 290  ATHAKPLADVLANSGQAVPKLLRQLMD 210
              ++  +A  L  SGQ+VP+ +++++D
Sbjct: 915  ERYSVDIAKALKQSGQSVPEPVQKMVD 941



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>DBP3_SCHPO (Q10202) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)|
          Length = 578

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
 Frame = -2

Query: 512 DGSQGSTFTVCSSM--GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTA 339
           D SQG+     +    G   VLV    +     + + ++V+    P + +DYV  + RT 
Sbjct: 449 DMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTG 508

Query: 338 RHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPK 231
           R    G     F+  D +HA  L +VL  + Q +P+
Sbjct: 509 RANTKGTAITFFTPQDKSHAGELVNVLRQAKQDIPE 544



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>DED1_YEAST (P06634) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) (DEAD box|
           protein 1)
          Length = 604

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   DDYV  + RT R    G     F+  ++   K L ++L  + Q VP  L+
Sbjct: 471 VINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFLK 530

Query: 221 QLM 213
             M
Sbjct: 531 DAM 533



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>DBP3_NEUCR (Q7S5R1) ATP-dependent RNA helicase dbp-3 (EC 3.6.1.-)|
          Length = 614

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 23/82 (28%), Positives = 40/82 (48%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
           G   VLV    +     + E ++V+    P + +DYV  + RT R    G+   +F++ D
Sbjct: 499 GTTTVLVATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKLGKAITLFTEHD 558

Query: 290 ATHAKPLADVLANSGQAVPKLL 225
             H+  L ++L  + Q VP+ L
Sbjct: 559 KAHSGSLVNILRAAKQPVPEEL 580



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>DDX4_MOUSE (Q61496) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)|
           (DEAD box protein 4) (VASA homolog) (Mvh)
          Length = 702

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = -2

Query: 437 SLATSG--VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATH-AKPLA 267
           S+A  G  +E  + V+  DLP + D+YV  + RT R    G     F      H A+PL 
Sbjct: 571 SVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTDSDNHLAQPLV 630

Query: 266 DVLANSGQAVPKLLRQL 216
            VL+++ Q VP  L ++
Sbjct: 631 KVLSDAQQDVPAWLEEI 647



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>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
            3.6.1.-)
          Length = 1211

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 22/87 (25%), Positives = 42/87 (48%)
 Frame = -2

Query: 470  GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
            G+  VL+    +     V++ ++V+  D P   +DYV    RT R    G      ++  
Sbjct: 876  GIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQ 935

Query: 290  ATHAKPLADVLANSGQAVPKLLRQLMD 210
              ++  +A  L  SGQ VP+ +++++D
Sbjct: 936  ERYSVDIAKALRQSGQKVPEPVQKMVD 962



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>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 630

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = -2

Query: 389 DLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLRQL 216
           DLP   DDYV  + RT R    G     F++ +    K L D+L  + Q +P  L ++
Sbjct: 489 DLPSDIDDYVHRIGRTGRAGNIGIATAFFNRNNKNIVKGLVDLLTEANQEIPDFLNKI 546



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>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen|
           Mab46F11)
          Length = 661

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSG--VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFS- 300
           G + VL+    S+A+ G  ++  + V+  D+P   DDYV  + RT R    G     F  
Sbjct: 538 GSMKVLI--ATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDP 595

Query: 299 KTDATHAKPLADVLANSGQAVPKLLR 222
           + D   A  L  +L  SGQ VP  LR
Sbjct: 596 EKDRAIAADLVKILEGSGQTVPDFLR 621



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>DDX4_HUMAN (Q9NQI0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)|
           (DEAD box protein 4) (VASA homolog)
          Length = 724

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = -2

Query: 437 SLATSG--VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATH-AKPLA 267
           S+A  G  +E  + V+  DLP + D+YV  + RT R    G     F      H A+PL 
Sbjct: 598 SVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLV 657

Query: 266 DVLANSGQAVPKLLRQL 216
            VL ++ Q VP  L ++
Sbjct: 658 KVLTDAQQDVPAWLEEI 674



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>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 617

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 23/86 (26%), Positives = 36/86 (41%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
           G  N+LV    +     +     V+  DLP   DDYV  + RT R    G     F++ +
Sbjct: 451 GRANILVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGVATAFFNRDN 510

Query: 290 ATHAKPLADVLANSGQAVPKLLRQLM 213
               K L ++L  + Q +P  L   +
Sbjct: 511 NNIVKGLYEILEEANQEIPPFLEDCL 536



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>DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-) (DEAD box|
           protein 1) (Helicase CA1)
          Length = 617

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 22/66 (33%), Positives = 30/66 (45%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   DDYV  + RT R    G     F+  +    K L ++L  + Q VP  L 
Sbjct: 483 VINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVPTFLS 542

Query: 221 QLMDKN 204
            L  +N
Sbjct: 543 DLSRQN 548



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>DDX4_PIG (Q6GWX0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)|
           (DEAD box protein 4) (VASA homolog) (VASA-like protein)
          Length = 722

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = -2

Query: 437 SLATSG--VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATH-AKPLA 267
           S+A  G  +E  + V+  DLP + D+YV  + RT R    G     F      H A+PL 
Sbjct: 596 SVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLV 655

Query: 266 DVLANSGQAVPKLLRQL 216
            VL ++ Q VP  L ++
Sbjct: 656 KVLTDAQQDVPAWLEEI 672



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>DDX4_MACFA (Q4R5S7) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)|
           (DEAD box protein 4) (VASA homolog)
          Length = 725

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = -2

Query: 437 SLATSG--VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATH-AKPLA 267
           S+A  G  +E  + V+  DLP + D+YV  + RT R    G     F      H A+PL 
Sbjct: 599 SVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLV 658

Query: 266 DVLANSGQAVPKLLRQL 216
            VL ++ Q VP  L ++
Sbjct: 659 KVLTDAQQDVPAWLEEI 675



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>DBP3_ASHGO (Q755A5) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)|
          Length = 535

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 23/82 (28%), Positives = 39/82 (47%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
           G  N+L+    +     +   + V+    P + +DYV  + RT R    G  H +F++ +
Sbjct: 420 GTANLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGATGVAHTLFTEQE 479

Query: 290 ATHAKPLADVLANSGQAVPKLL 225
              A  L +VL  +GQ VP+ L
Sbjct: 480 KHLAGALVNVLNGAGQPVPEEL 501



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>DBP3_KLULA (Q6CT46) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)|
          Length = 504

 Score = 38.1 bits (87), Expect = 0.018
 Identities = 23/84 (27%), Positives = 41/84 (48%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
           G  N+L+    +     +   + V+    P + +DYV  + RT R    G  H +F++ +
Sbjct: 389 GKCNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQYGTAHTLFTEQE 448

Query: 290 ATHAKPLADVLANSGQAVPKLLRQ 219
              A  L +VL  +GQ VP+ L++
Sbjct: 449 KHLAGALVNVLNGAGQPVPEELKK 472



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>DED1_CANAL (Q5A4E2) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 672

 Score = 38.1 bits (87), Expect = 0.018
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   DDYV  + RT R    G     F++ +    K L ++L+ + Q VP  L 
Sbjct: 515 VINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNVVKGLIELLSEANQEVPDFLT 574

Query: 221 QL 216
           ++
Sbjct: 575 KI 576



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>DED1_SCHPO (O13370) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)|
          Length = 636

 Score = 37.7 bits (86), Expect = 0.024
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLL 225
           V+  DLP   DDYV  + RT R    G+    F++ +   AK L ++L  + Q  P  L
Sbjct: 502 VINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECPSFL 560



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>DBP3_EMENI (Q5AWA6) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)|
          Length = 498

 Score = 37.7 bits (86), Expect = 0.024
 Identities = 23/82 (28%), Positives = 38/82 (46%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
           G   VLV    +     +   ++V+    P + +DYV  + RT R    G    +F++TD
Sbjct: 372 GAATVLVATDVAARGLDIPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETD 431

Query: 290 ATHAKPLADVLANSGQAVPKLL 225
              +  L +VL  + Q VP+ L
Sbjct: 432 KAQSGALINVLKAANQEVPEAL 453



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>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC|
            3.6.1.-)
          Length = 1194

 Score = 37.4 bits (85), Expect = 0.031
 Identities = 26/102 (25%), Positives = 45/102 (44%)
 Frame = -2

Query: 521  TVNDGSQGSTFTVCSSMGLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRT 342
            T++D  +G    VC  +   ++  +G +      V++ ++V+  D P   +DYV    RT
Sbjct: 853  TISDFKKG----VCPILIATSIAARGLD------VKQLKLVINYDAPNHLEDYVHRAGRT 902

Query: 341  ARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLRQL 216
             R    G      ++     A  +A  L  SGQ VP  L ++
Sbjct: 903  GRAGNTGTAVTFITEEQENCASGIAKALEQSGQPVPDRLNEM 944



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>ROK1_SCHPO (Q09775) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)|
          Length = 481

 Score = 37.4 bits (85), Expect = 0.031
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -2

Query: 407 EIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKL 228
           ++V+  D P S   Y+  + RT R    G+    F+K D  + K +A V+ +SG  VP  
Sbjct: 358 KMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKEDGEYIKLIAGVMRSSGCEVPNW 417

Query: 227 LRQL 216
           +  L
Sbjct: 418 VMAL 421



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>DDX4_RAT (Q64060) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)|
           (DEAD box protein 4) (VASA homolog) (rVLG)
          Length = 713

 Score = 37.4 bits (85), Expect = 0.031
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = -2

Query: 437 SLATSG--VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATH-AKPLA 267
           S+A  G  +E  + V+  +LP + D+YV  + RT R    G     F      H A+PL 
Sbjct: 583 SVAARGLDIENVQHVINFNLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLV 642

Query: 266 DVLANSGQAVPKLLRQL 216
            VL+++ Q VP  L ++
Sbjct: 643 KVLSDAQQDVPAWLEEI 659



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>DED1_ASPFU (Q4WP13) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)|
          Length = 674

 Score = 37.4 bits (85), Expect = 0.031
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   DDYV  + RT R    G     F++++    + L D+L  + Q VP  L 
Sbjct: 522 VINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRSNRGVVRELIDLLKEAHQEVPSFLE 581

Query: 221 QL 216
            +
Sbjct: 582 SI 583



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>DBP2_USTMA (Q4PHU9) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)|
          Length = 552

 Score = 37.0 bits (84), Expect = 0.041
 Identities = 17/68 (25%), Positives = 35/68 (51%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           V++   V+  D P + +DYV  + RT R    G  +  F+  ++  A+ L  +L  + Q 
Sbjct: 442 VKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTPENSKSARELIGILREAKQE 501

Query: 239 VPKLLRQL 216
           +P+ + ++
Sbjct: 502 IPREIEEM 509



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>ROK1_KLULA (Q6CSW1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)|
          Length = 579

 Score = 36.6 bits (83), Expect = 0.053
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
 Frame = -2

Query: 443 CESLATSGVE--EFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPL 270
           C  +   GV+     +V+  D+P S   YV  + RT R   +G+    ++K D+   KP+
Sbjct: 439 CTDVLARGVDFKGVNLVINYDVPRSAQAYVHRIGRTGRGGRSGKAITFYTKQDSLAIKPI 498

Query: 269 ADVLANSGQAVPKLLRQL 216
            +V+  SG  V + ++++
Sbjct: 499 INVMKQSGCEVSEWMQKI 516



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>DBP3_USTMA (Q4PDT1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)|
          Length = 585

 Score = 36.6 bits (83), Expect = 0.053
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           +   E V+    P + +DYV  + RT R    G+    F++ D  HA  L  VL ++ Q 
Sbjct: 486 IPNVEHVVNYTFPLTIEDYVHRIGRTGRGGKTGKSLTFFTEMDKAHAGELIRVLKDADQK 545

Query: 239 VPKLLRQ----LMDKNHS 198
           VP  L +    +  K HS
Sbjct: 546 VPDALTKFPTTIKKKTHS 563



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>ROK1_ASHGO (Q75AE1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)|
          Length = 569

 Score = 36.6 bits (83), Expect = 0.053
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = -2

Query: 443 CESLATSGVE--EFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPL 270
           C  +   G++     +V+  D+P S   YV  + RT R    G     F+K DA   KP+
Sbjct: 430 CTDVLARGIDFKGINLVINYDVPRSAQAYVHRIGRTGRGGRKGTAVTFFTKQDAIAVKPI 489

Query: 269 ADVLANSG 246
            +V+  SG
Sbjct: 490 VNVMKQSG 497



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>ROK1_DEBHA (Q6BP45) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)|
          Length = 550

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = -2

Query: 404 IVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSG 246
           +V+  D+P S   YV  + RT R   AG+    F+K D    KP+ +V+  SG
Sbjct: 432 LVINYDVPQSAQAYVHRIGRTGRGGKAGKAVTFFTKEDDKAVKPIINVMKQSG 484



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>DED1_ASPOR (Q2UGK3) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)|
          Length = 675

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   DDYV  + RT R    G     F++ +    + L D+L  + Q VP  L 
Sbjct: 520 VINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLIDLLKEAHQEVPSFLE 579

Query: 221 QL 216
            +
Sbjct: 580 SI 581



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>ROK1_CANAL (Q9Y7C4) ATP-dependent RNA helicase CHR1 (EC 3.6.1.-)|
          Length = 578

 Score = 35.8 bits (81), Expect = 0.091
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = -2

Query: 404 IVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSG 246
           +V+  D+P S   YV  + RT R   AG+    F+K D    KP+ +V+  SG
Sbjct: 449 LVINYDVPQSAQAYVHRIGRTGRGGKAGKAVTFFTKEDDKAIKPILNVMKQSG 501



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>DED1_YARLI (Q6CB69) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 618

 Score = 35.8 bits (81), Expect = 0.091
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = -2

Query: 389 DLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLL 225
           DLP   DDYV  + RT R    G     F++ +    + L D+L  + Q VP+ L
Sbjct: 494 DLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNKGIVRELIDILKEAHQDVPQFL 548



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>DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 675

 Score = 35.8 bits (81), Expect = 0.091
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   DDYV  + RT R    G     F++ +    + L D+L  + Q VP  L 
Sbjct: 517 VINYDLPTDVDDYVHRIGRTGRAGNTGIATAFFNRGNRGIVRELMDLLKEANQEVPAFLE 576

Query: 221 QL 216
            +
Sbjct: 577 TI 578



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>DDX3Y_PONPY (Q5RF43) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box|
           protein 3, Y-chromosomal)
          Length = 658

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   ++YV  + RT R    G     F++ +    K L D+L  + Q VP  L 
Sbjct: 511 VINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLE 570

Query: 221 QLMDKNH 201
            +  ++H
Sbjct: 571 NMAYEHH 577



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>DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box|
           protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2)
           (mDEAD2) (D1Pas1-related sequence 1)
          Length = 658

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   ++YV  + RT R    G     F++ +    K L D+L  + Q VP  L 
Sbjct: 512 VINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEVPSWLE 571

Query: 221 QLMDKNH 201
            +  ++H
Sbjct: 572 SMAYEHH 578



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>DDX3X_MOUSE (Q62167) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box|
           protein 3, X-chromosomal) (DEAD box RNA helicase DEAD3)
           (mDEAD3) (Embryonic RNA helicase) (D1Pas1-related
           sequence 2)
          Length = 661

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   ++YV  + RT R    G     F++ +    K L D+L  + Q VP  L 
Sbjct: 512 VINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLE 571

Query: 221 QLMDKNH 201
            +  ++H
Sbjct: 572 NMAFEHH 578



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>DDX3X_HUMAN (O00571) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box|
           protein 3, X-chromosomal) (Helicase-like protein 2)
           (HLP2) (DEAD box, X isoform)
          Length = 661

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   ++YV  + RT R    G     F++ +    K L D+L  + Q VP  L 
Sbjct: 512 VINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLE 571

Query: 221 QLMDKNH 201
            +  ++H
Sbjct: 572 NMAYEHH 578



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>DED1_USTMA (Q4P733) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 672

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 389 DLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLL 225
           DLP   DDYV  + RT R    G     F++ +    + L ++L  + Q VP+ L
Sbjct: 526 DLPSDVDDYVHRIGRTGRAGNVGHATAFFNRGNKNIVRDLIELLKEANQEVPQWL 580



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>PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase Pl10 (EC 3.6.1.-)|
          Length = 660

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   ++YV  + RT R    G     F++ +    K L D+L  + Q VP  L 
Sbjct: 512 VINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLE 571

Query: 221 QLMDKNH 201
            +  ++H
Sbjct: 572 NMAFEHH 578



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>DDX3Y_HUMAN (O15523) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box|
           protein 3, Y-chromosomal)
          Length = 660

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   ++YV  + RT R    G     F++ +    K L D+L  + Q VP  L 
Sbjct: 511 VINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLE 570

Query: 221 QLMDKNH 201
            +  ++H
Sbjct: 571 NMAYEHH 577



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>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
            3.6.1.-)
          Length = 1227

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 21/85 (24%), Positives = 37/85 (43%)
 Frame = -2

Query: 470  GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
            G++ +L+    +     V++ ++V+  D P   +DYV    RT R    G      +   
Sbjct: 896  GVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQ 955

Query: 290  ATHAKPLADVLANSGQAVPKLLRQL 216
               A  +A  L  SGQ +P  L ++
Sbjct: 956  ENCAPGIAKALEQSGQPIPDRLNEM 980



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>ROK1_YEAST (P45818) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-) (Rescuer of|
           KEM1 protein 1)
          Length = 564

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = -2

Query: 443 CESLATSGVE--EFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPL 270
           C  +   G++     +V+  D+P S   YV  + RT R   +G+    ++K D+   KP+
Sbjct: 428 CTDVLARGIDFKGVNLVINYDVPGSSQAYVHRIGRTGRGGRSGKAITFYTKQDSVAIKPI 487

Query: 269 ADVLANSGQAVPKLLRQL 216
            +V+  SG  V + + ++
Sbjct: 488 INVMKQSGCEVSEWMDKM 505



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>PRP11_SCHPO (Q9P7C7) Pre-mRNA-processing ATP-dependent RNA helicase prp11 (EC|
           3.6.1.-)
          Length = 1014

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 24/85 (28%), Positives = 37/85 (43%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
           G+ +VL+          V+  ++V+  D P   +DYV  + RT R    G      +   
Sbjct: 717 GVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQ 776

Query: 290 ATHAKPLADVLANSGQAVPKLLRQL 216
             +A  +A  L  S Q VPK L+ L
Sbjct: 777 EKYAVDIAKALKMSKQPVPKELQTL 801



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>DDX52_HUMAN (Q9Y2R4) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)|
           (DEAD box protein 52) (ATP-dependent RNA helicase
           ROK1-like)
          Length = 599

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVE--EFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSK 297
           G I VL+  C +L   G++     +V+  D P S  +Y+  + RT R    G+    F++
Sbjct: 461 GKIWVLI--CTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTE 518

Query: 296 TDATHAKPLADVLANSGQAVPKLLR 222
            D    + +A+V+  +G  VP+ ++
Sbjct: 519 DDKPLLRSVANVIQQAGCPVPEYIK 543



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>AN3_XENLA (P24346) Putative ATP-dependent RNA helicase an3 (EC 3.6.1.-)|
          Length = 697

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   ++YV  + RT R    G     F++ +    K L D+L  + Q VP  L 
Sbjct: 554 VINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEVPSWLE 613

Query: 221 QLMDKNH 201
            +  + H
Sbjct: 614 NMAYEQH 620



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>DDX52_RAT (Q99PT0) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)|
           (DEAD box protein 52) (ATP-dependent RNA helicase
           ROK1-like) (rROK1L)
          Length = 598

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVE--EFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSK 297
           G I VL+  C +L   G++     +V+  D P S  +Y+  + RT R    G+    F++
Sbjct: 462 GKIWVLI--CTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTE 519

Query: 296 TDATHAKPLADVLANSGQAVPKLLR 222
            D    + +A+V+  +G  VP+ ++
Sbjct: 520 DDKPLLRSVANVIQQAGCPVPEYIK 544



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>DDX52_MOUSE (Q8K301) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)|
           (DEAD box protein 52) (ATP-dependent RNA helicase
           ROK1-like)
          Length = 598

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVE--EFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSK 297
           G I VL+  C +L   G++     +V+  D P S  +Y+  + RT R    G+    F++
Sbjct: 462 GKIWVLI--CTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTE 519

Query: 296 TDATHAKPLADVLANSGQAVPKLLR 222
            D    + +A+V+  +G  VP+ ++
Sbjct: 520 DDKPLLRSVANVIQQAGCPVPEYIK 544



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>ROK1_CANGA (Q6FN65) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)|
          Length = 565

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = -2

Query: 443 CESLATSGVE--EFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPL 270
           C  +   G++     +V+  D+P +   YV  + RT R   +G+   +++K D+   KP+
Sbjct: 430 CTDVLARGIDFKGVNLVINYDVPTTAQAYVHRIGRTGRGGRSGKAVTLYTKLDSVAIKPI 489

Query: 269 ADVLANSG 246
            +V+  SG
Sbjct: 490 INVMKQSG 497



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>DED1_NEUCR (Q9P6U9) ATP-dependent RNA helicase ded-1 (EC 3.6.1.-)|
          Length = 688

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   DDYV  + RT R    G     F++ +    + L ++L  + Q VP  L 
Sbjct: 525 VINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRELLELLKEANQEVPAFLE 584

Query: 221 QL 216
            +
Sbjct: 585 TI 586



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>DBP2_SCHPO (P24782) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-) (p68-like|
           protein)
          Length = 550

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -2

Query: 389 DLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAV-PKL 228
           D P + +DYV  + RT R    G  +  F+  +A  A+ L  +L+ + Q + PKL
Sbjct: 445 DFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQARELVSILSEAKQDIDPKL 499



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>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)|
          Length = 563

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = -2

Query: 434 LATSGVEEFEI--VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADV 261
           +A+ G++  +I  V+  D P + +DYV  + RT R    G     F+  +A  A+ L  +
Sbjct: 446 VASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQARDLVTI 505

Query: 260 LANSGQAVPKLLRQLM 213
           L+ + Q +   L +++
Sbjct: 506 LSEAKQQIDPRLAEMV 521



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>DBP3_ASPFU (Q4WH83) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)|
          Length = 503

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 22/82 (26%), Positives = 36/82 (43%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
           G   VLV    +     +   ++V+    P + +DYV  + RT R    G    +F++ D
Sbjct: 387 GSATVLVATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRTGRAGADGHAITLFTEAD 446

Query: 290 ATHAKPLADVLANSGQAVPKLL 225
              +  L +VL  + Q VP  L
Sbjct: 447 KAQSGALINVLRAAKQDVPDAL 468



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>DBP3_ASPOR (Q2UMH8) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)|
          Length = 498

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 21/80 (26%), Positives = 36/80 (45%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
           G   VLV    +     +   + V+    P + +DYV  + RT R    G    +F++TD
Sbjct: 382 GAATVLVATDVAARGLDIPSVKQVINVTFPLTVEDYVHRIGRTGRAGAEGHAVTLFTETD 441

Query: 290 ATHAKPLADVLANSGQAVPK 231
              +  L +VL  + Q +P+
Sbjct: 442 KAQSGALINVLRAAKQDIPE 461



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>DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)|
           (DEAD box protein 43) (DEAD box protein HAGE) (Helical
           antigen)
          Length = 648

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
 Frame = -2

Query: 563 VAQKLSSSLKLEILTVN----DGSQGSTFTVCSSMGLINVLVKGCESLATSGVEEFEIVL 396
           VA  LSS L L  ++V     D  Q        +     V +     LA+ G++  ++  
Sbjct: 499 VADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTH 558

Query: 395 VA--DLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V   D P + ++YV  + RT R    G      ++ D   A  L ++L  + Q++P+ L 
Sbjct: 559 VYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELV 618

Query: 221 QLMDK 207
            + ++
Sbjct: 619 SMAER 623



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>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)|
          Length = 554

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = -2

Query: 434 LATSGVEEFEI--VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADV 261
           +A+ G++  +I  VL  D P + +DYV  + RT R    G     F+  ++  A+ L  +
Sbjct: 436 VASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQARDLVTI 495

Query: 260 LANSGQAVPKLLRQLM 213
           L  + Q +   L +++
Sbjct: 496 LTEAKQQIDPRLAEMV 511



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>DDX3Y_PANTR (Q6GVM6) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box|
           protein 3, Y-chromosomal)
          Length = 660

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  DLP   ++YV  + RT R    G     F++ +    K L D+L  + Q VP  L 
Sbjct: 511 VINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEVPSWLE 570

Query: 221 QL 216
            +
Sbjct: 571 NM 572



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>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)|
          Length = 557

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           V+    V+  D+P + +DYV  + RT R    G     F++ + T    L  ++  + Q 
Sbjct: 427 VKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKTLGAQLISIMREAKQE 486

Query: 239 VPK 231
           +P+
Sbjct: 487 IPQ 489



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>DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)|
          Length = 547

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
 Frame = -2

Query: 434 LATSGVEEFEI--VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADV 261
           +A+ G++  +I  VL  D P + +DY+  + RT R    G     F+  ++  A+ L  +
Sbjct: 427 VASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDLVTI 486

Query: 260 LANSGQAVPKLLRQL 216
           L  + Q +   L ++
Sbjct: 487 LTEAKQQIDPRLAEM 501



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>GLH3_CAEEL (O01836) ATP-dependent RNA helicase glh-3 (EC 3.6.1.-) (Germline|
           helicase 3)
          Length = 720

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKP-LADVLANSGQAVPKLL 225
           V+  D+P + DDY+  + RT R   +G      S  D     P L   LA++ Q VP  +
Sbjct: 635 VINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWM 694

Query: 224 RQ 219
           ++
Sbjct: 695 KE 696



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>DBP2_YARLI (Q6C4D4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)|
          Length = 552

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           V+    V+  D P + +DYV  + RT R    G  +  F++ +   A+ L  +L  + Q 
Sbjct: 429 VKGINFVINYDYPSNSEDYVHRIGRTGRAGTKGTAYTYFTEDNRKQARDLLVILREAKQH 488

Query: 239 V-PKL 228
           + PKL
Sbjct: 489 IDPKL 493



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>DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)|
          Length = 555

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
 Frame = -2

Query: 434 LATSGVEEFEI--VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADV 261
           +A+ G++   I  VL  D P + +DY+  + RT R    G    +F+  +   A+ L +V
Sbjct: 440 VASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAMGTAITLFTTDNQKQARDLVNV 499

Query: 260 LANSGQAV-PKLL 225
           L  + Q + P+L+
Sbjct: 500 LQEAKQQIDPRLV 512



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>CPNE8_HUMAN (Q86YQ8) Copine-8 (Copine VIII)|
          Length = 564

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 25/104 (24%), Positives = 45/104 (43%)
 Frame = -2

Query: 521 TVNDGSQGSTFTVCSSMGLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRT 342
           +V DGSQ     + +  G+I+ + +  ES+  +      I++V   P  FD  VE+    
Sbjct: 428 SVKDGSQYFVLLIVTD-GIISDMAQTKESIVNASKLPMSIIIVGVGPAEFDAMVELDGDD 486

Query: 341 ARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLRQLMD 210
            R +  G+    +++ D     P  D +  SG  +  + R   D
Sbjct: 487 VRVSSRGK----YAERDIVQFVPFRDYIDRSGNHILSMARLAKD 526



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>DBP2_CRYNE (Q5KFM6) ATP-dependent RNA helicase DBP2-A (EC 3.6.1.-)|
          Length = 540

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           V +   V+  D P + +DY+  + RT R    G  +  F+  ++  A+ L  +L  S   
Sbjct: 422 VRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKAD 481

Query: 239 VPKLLRQL 216
           +P  L ++
Sbjct: 482 IPPELEEM 489



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>PRP28_CANAL (Q59W52) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC|
           3.6.1.-)
          Length = 581

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
 Frame = -2

Query: 569 DNVAQKLSSSLKLEILTVNDGSQGSTFTVCSSMGLINVLVKGCESLATSGVEEFEIVLVA 390
           D+++Q+LSS+    ++     SQ       ++       V     +A  G++   + LV 
Sbjct: 455 DSLSQELSSNDINNVVIHGSKSQDMREQAITNFRNHESEVLIATDVAARGIDIPNVTLVI 514

Query: 389 D--LPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLL 225
           +  +   FD+Y+  + RT R    GE     S  D     PL   L   G+ +P  L
Sbjct: 515 NYQMVKKFDEYIHRIGRTGRAGNLGESFTFISDQDTEIFTPLKKFLKKGGKRLPDWL 571



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>GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-) (Germline|
           helicase 1)
          Length = 763

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  D+P + DDY+  + RT R   +G     F   D +    L  VLA++ Q VP  ++
Sbjct: 678 VINYDMPDNIDDYIHRIGRTGRVGNSGRA-TSFISEDCSLLSELVGVLADAQQIVPDWMQ 736

Query: 221 QLMDKNH 201
                N+
Sbjct: 737 GAAGGNY 743



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>GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-) (Germline|
            helicase 2)
          Length = 974

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = -2

Query: 401  VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
            V+  D+P + DDY+  + RT R   AG     F   D      L  VL+++ Q VP+ ++
Sbjct: 889  VINYDMPDNIDDYIHRIGRTGRVGNAGRA-TSFISEDCNLLSELVRVLSDADQLVPEWMQ 947



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>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)|
          Length = 562

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = -2

Query: 434 LATSGVEEFEI--VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADV 261
           +A+ G++   I  VL  D P + +DY+  + RT R    G     F+  ++  A+ L  V
Sbjct: 440 VASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQARELVGV 499

Query: 260 LANSGQAVPKLLRQL 216
           L  + Q +   L ++
Sbjct: 500 LQEAKQQIDPRLAEM 514



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>YKJ8_YEAST (P34246) Hypothetical 39.8 kDa protein in APE1/LAP4-CWP1 intergenic|
           region
          Length = 357

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = -2

Query: 575 ANDNVAQKLSSSLKLEIL-TVNDGSQGSTFTVCSSMGLINVLVKGCESLATSGVEEFEIV 399
           + + +A  + S+  +++   +ND   G    V     ++N      +SLAT+ V+EFEIV
Sbjct: 32  SKEKLASSMPSTCDIQLKRAINDAYPGGGIKVT----VLNSTTASLDSLATTHVKEFEIV 87

Query: 398 LVADL 384
           ++ D+
Sbjct: 88  IIPDI 92



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>HE64_TRYBB (Q26696) Putative DEAD-box RNA helicase HEL64 (EC 3.6.1.-)|
          Length = 568

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDA----THAKPLADVLAN 252
           +++ E V+  D P   DDYV  + RT R    G    + +K +A    +  K L  +L  
Sbjct: 411 IKQLETVINYDFPMQIDDYVHRIGRTGRAGGEGRCVYLITKKEAQITPSVLKELIGILER 470

Query: 251 SGQAVP 234
           + Q +P
Sbjct: 471 AQQEIP 476



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>DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)|
          Length = 554

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/67 (25%), Positives = 33/67 (49%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           V+    V+  D+P + +DYV  + RT R    G     F++ + +    L  ++  + Q 
Sbjct: 426 VKGINYVINYDMPGNIEDYVHRIGRTGRAGSTGTAISFFTEGNKSLGAALIKIMREAKQD 485

Query: 239 VPKLLRQ 219
           +P+ LR+
Sbjct: 486 IPEELRR 492



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>DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)|
          Length = 562

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = -2

Query: 401 VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQAVPKLLR 222
           V+  D+P + +DYV  + RT R   +G     F++ ++     L  ++  + Q VP  L+
Sbjct: 446 VINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKIMREANQTVPPELQ 505

Query: 221 Q 219
           +
Sbjct: 506 R 506



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>DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)|
          Length = 544

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 16/65 (24%), Positives = 31/65 (47%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           V+    V+  D+P + +DYV  + RT R    G     F++ + +    L  ++  + Q 
Sbjct: 423 VKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLISIMREAKQN 482

Query: 239 VPKLL 225
           +P+ L
Sbjct: 483 IPEEL 487



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>RR30_SPIOL (P19954) Plastid-specific 30S ribosomal protein 1, chloroplast|
           precursor (CS-S5) (CS5) (S22) (Ribosomal protein 1)
           (PSRP-1)
          Length = 302

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 19/45 (42%), Positives = 24/45 (53%)
 Frame = -2

Query: 572 NDNVAQKLSSSLKLEILTVNDGSQGSTFTVCSSMGLINVLVKGCE 438
           N N+   LS+S+ L     N  S  STFT   S+GL NV VK  +
Sbjct: 12  NPNLTNSLSNSINLSSTPTNLSSLRSTFTNSCSLGL-NVAVKSVQ 55



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>DBP2_DEBHA (Q6BY27) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)|
          Length = 536

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           V+    V+  D+P + +DYV  + RT R    G     F+  ++     L  ++  + Q 
Sbjct: 418 VKGISYVINLDMPGNIEDYVHRIGRTGRAGSTGTAVSFFTDNNSKLGGDLCKIMREANQT 477

Query: 239 VP 234
           +P
Sbjct: 478 IP 479



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>YK82_YEAST (P36170) Hypothetical protein YKR102W precursor|
          Length = 1169

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
 Frame = +1

Query: 265  SAKGFA*VASVLEKMTCTSPATV*RAVLVRIST*SSNDGGKSATNTISNSSTPDVAKLSQ 444
            ++ GF+   + + +MT  +P+T  +  L+ +S+  SN    + ++ + +++T  +  ++ 
Sbjct: 912  TSSGFSRDRTTVYRMTSETPSTNEQTTLITVSSCESNSCSNTVSSAVVSTATTTINGITT 971

Query: 445  PFTSTL-ISPMLLHTVKVLPCEPSFTV 522
             +T+   +S   L TV  L  E   T+
Sbjct: 972  EYTTWCPLSATELTTVSKLESEEKTTL 998



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>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
            3.6.1.-)
          Length = 1156

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
 Frame = -2

Query: 461  NVLVKGCESLATSG--VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDA 288
            NV +    S+A  G  V++ ++V+  D+P   +DYV    RT R    G      +    
Sbjct: 777  NVPIVTATSVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQD 836

Query: 287  THAKPLADVLANSGQAVPKLLRQL 216
             +A+ +   L  S   VP  L  +
Sbjct: 837  RYARDIIAALKASAAHVPPELEAM 860



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>GPT_CRILO (P23338) UDP-N-acetylglucosamine--dolichyl-phosphate|
           N-acetylglucosaminephosphotransferase (EC 2.7.8.15)
           (GPT) (G1PT) (N-acetylglucosamine-1-phosphate
           transferase) (GlcNAc-1-P transferase)
          Length = 408

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
 Frame = -2

Query: 536 KLEILTVNDG-SQGSTFTVCSSMGLINVLVK 447
           +L+++TV+ G S+   FT C++M LIN+L+K
Sbjct: 339 RLQLVTVHRGESEDGAFTECNNMTLINLLLK 369



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>GPT_CRIGR (P24140) UDP-N-acetylglucosamine--dolichyl-phosphate|
           N-acetylglucosaminephosphotransferase (EC 2.7.8.15)
           (GPT) (G1PT) (N-acetylglucosamine-1-phosphate
           transferase) (GlcNAc-1-P transferase)
          Length = 408

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
 Frame = -2

Query: 536 KLEILTVNDG-SQGSTFTVCSSMGLINVLVK 447
           +L+++TV+ G S+   FT C++M LIN+L+K
Sbjct: 339 RLQLVTVHRGESEDGAFTECNNMTLINLLLK 369



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>DRS1_YEAST (P32892) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-) (Deficiency|
           of ribosomal subunits protein 1)
          Length = 752

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -2

Query: 464 INVLVKGCESLATSGVE--EFEIVLVADLPPSFDDYVEILTRTAR 336
           + V V  C  LA+ G++  + E+V+  D+P S++ Y+  + RTAR
Sbjct: 528 LEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTAR 572



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>DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)|
          Length = 725

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -2

Query: 464 INVLVKGCESLATSGVE--EFEIVLVADLPPSFDDYVEILTRTAR 336
           + V V  C  LA+ G++  + E+V+  D+P S++ Y+  + RTAR
Sbjct: 503 LQVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTAR 547



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>DRS1_ASHGO (Q75F95) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)|
          Length = 734

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = -2

Query: 464 INVLVKGCESLATSGVE--EFEIVLVADLPPSFDDYVEILTRTAR 336
           ++V V  C  LA+ G++  + E+V+  D+P +++ Y+  + RTAR
Sbjct: 516 LDVPVLVCTDLASRGLDIPKIEVVINYDMPKTYEIYLHRVGRTAR 560



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>DDX56_MOUSE (Q9D0R4) Probable ATP-dependent RNA helicase DDX56 (EC 3.6.1.-)|
           (DEAD box protein 56) (ATP-dependent 61 kDa nucleolar
           RNA helicase)
          Length = 546

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = -2

Query: 440 ESLATSGVEEFEI--VLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLA 267
           ES    G++   +  VL  DLPP+ + YV    RTAR    G V       +      + 
Sbjct: 342 ESGVARGIDFHHVSAVLNFDLPPTAEAYVHRAGRTARANNPGIVLTFVLPAEQPFLGKIE 401

Query: 266 DVLANSGQA 240
           D+L+  G+A
Sbjct: 402 DLLSGEGEA 410



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>DBP2_YEAST (P24783) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) (DEAD box|
           protein 2) (p68-like protein)
          Length = 546

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = -2

Query: 419 VEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDATHAKPLADVLANSGQA 240
           V+    V+  D+P + +DYV  + RT R    G     F++ +      L  ++  + Q 
Sbjct: 426 VKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQN 485

Query: 239 VP 234
           +P
Sbjct: 486 IP 487



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>DBP7_ASHGO (Q754J2) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)|
          Length = 710

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -2

Query: 455 LVKGCESLATSGVEEFEIVLVADLPPSF--DDYVEILTRTARHTVAGE 318
           LV  C  +A+ G++   +  V ++ P F  +D++  + RTAR  VAGE
Sbjct: 498 LVLFCTDVASRGLDLPRVSTVIEMDPPFAVEDHLHRIGRTARAGVAGE 545



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>CACB2_HUMAN (Q08289) Voltage-dependent L-type calcium channel beta-2 subunit|
           (CAB2) (Calcium channel, voltage-dependent, beta 2
           subunit) (Lambert-Eaton myasthenic syndrome antigen B)
           (MYSB)
          Length = 660

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = -2

Query: 464 INVLVKGCESLATSGVEEFEIVL----VADLPPSFDDYVEILTRTARHTVAGEVHVIFSK 297
           +NV +   + LA    E F+++L    + D      DY+E   +      +   + + S+
Sbjct: 419 LNVQMVAADKLAQCPPELFDVILDENQLEDACEHLADYLEAYWKATHPPSSSLPNPLLSR 478

Query: 296 TDATHAKPLADVLANSGQ 243
           T AT + PL+  LA++ Q
Sbjct: 479 TLATSSLPLSPTLASNSQ 496



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>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 974

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 20/88 (22%), Positives = 38/88 (43%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVEEFEIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTD 291
           GL++VL+    +     V+   +V+  D P   +DYV  + RT R    G          
Sbjct: 713 GLVSVLIATSVAARGLDVKGLGLVVNWDSPNHMEDYVHRVGRTGRAGQKGTALTFLLSDQ 772

Query: 290 ATHAKPLADVLANSGQAVPKLLRQLMDK 207
              A  ++  + +SG A P  ++ + ++
Sbjct: 773 ERLAAEISRAIKSSGNAPPAPVQLMTER 800



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>DBP8_YARLI (Q6C799) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)|
          Length = 442

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 407 EIVLVADLPPSFDDYVEILTRTARHTVAGEVHVIFSKTDAT 285
           E+V+  DLP   DDY+  + RTAR    G+   + ++ D T
Sbjct: 319 EMVINFDLPADADDYIHRVGRTARAGRKGQSVSLVTERDVT 359



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>GPT_MOUSE (P42867) UDP-N-acetylglucosamine--dolichyl-phosphate|
           N-acetylglucosaminephosphotransferase (EC 2.7.8.15)
           (GPT) (G1PT) (N-acetylglucosamine-1-phosphate
           transferase) (GlcNAc-1-P transferase)
          Length = 410

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -2

Query: 533 LEILTVNDG-SQGSTFTVCSSMGLINVLVK 447
           L ++TV+ G S+   FT C++M LIN+L+K
Sbjct: 342 LRLVTVHQGESEDGAFTECNNMTLINLLLK 371



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>DRS1_CANAL (Q5ACK7) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)|
          Length = 613

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -2

Query: 464 INVLVKGCESLATSGVE--EFEIVLVADLPPSFDDYVEILTRTAR 336
           + V V  C  LA  G++  + E+V+  D+P +F+ Y+  + RTAR
Sbjct: 422 LEVPVLICTDLAARGLDIPKIELVINYDMPKTFEIYLHRVGRTAR 466



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>DDX28_MOUSE (Q9CWT6) Probable ATP-dependent RNA helicase DDX28 (EC 3.6.1.-)|
           (Mitochondrial DEAD box protein 28)
          Length = 540

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -2

Query: 470 GLINVLVKGCESLATSGVEEF--EIVLVADLPPSFDDYVEILTRTAR 336
           G  N+LV  C  +A+ G++    E+V+  D PP+  DY+    R  R
Sbjct: 446 GSQNILV--CTDIASRGLDSVHVEVVINYDFPPTLQDYIHRAGRVGR 490



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>DBP6_DEBHA (Q6BPT8) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-)|
          Length = 679

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
 Frame = -2

Query: 464 INVLVKGCESLATSGVEEFEI--VLVADLPPSFDDYVEILTRTARHTVAG-EVHVIFSKT 294
           IN+LV     L   G++   I  V+  DLP S  +YV  + RTAR    G   +  F K 
Sbjct: 569 INILV--ATDLIARGIDILSITDVINYDLPNSSREYVHRVGRTARANQEGFAYNFCFGKG 626

Query: 293 DATHAKPLADVLANSGQAVPKL---LRQLMDKN 204
           +A   K L   +  S + + +L    +QL++ N
Sbjct: 627 EAKWFKKLMAQVGRSEKNIEELELDTKQLIEDN 659


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,708,598
Number of Sequences: 219361
Number of extensions: 1575213
Number of successful extensions: 4708
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 4577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4708
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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