ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd0c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009426.1| Triticum aestivum clone wlmk1.pk0023.a8:fis, full... 412 e-112
2ref|XM_472733.1| Oryza sativa (japonica cultivar-group), predic... 291 1e-75
3emb|AJ277702.1|ZMA277702 Zea mays mRNA for SERK1 protein 291 1e-75
4emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4,... 291 1e-75
5emb|AJ400868.1|ZMA400868 Zea mays serk1 gene for somatic embryog... 291 1e-75
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 291 1e-75
7dbj|AK099777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
8dbj|AK105892.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
9dbj|AK061767.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
10gb|AY652735.1| Oryza sativa (japonica cultivar-group) somatic em... 283 3e-73
11gb|BT009223.1| Triticum aestivum clone wle1n.pk0076.d4:fis, full... 165 2e-37
12gb|AY110115.1| Zea mays CL444_1 mRNA sequence 149 1e-32
13emb|AJ277703.1|ZMA277703 Zea mays mRNA for SERK2 protein 143 6e-31
14emb|AJ400869.1|ZMA400869 Zea mays serk2 gene for somatic embryog... 143 6e-31
15ref|XM_464966.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-13
16ref|XM_469440.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-13
17ref|XM_469439.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-13
18gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 86 1e-13
20gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genom... 86 1e-13
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
23dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
24dbj|AK111846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
25dbj|AK102120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
26dbj|AK066118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-11
27gb|AY104736.1| Zea mays PCO086463 mRNA sequence 78 3e-11
28gb|AY791293.2| Cocos nucifera somatic embryogenesis receptor kin... 70 8e-09
29gb|AY106186.1| Zea mays PCO110698 mRNA sequence 70 8e-09
30gb|AY108393.1| Zea mays PCO126676 mRNA sequence 68 3e-08
31ref|XM_480326.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
32dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
33dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
34dbj|AP003882.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
35dbj|AK071471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
36dbj|AK060589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
37ref|XM_480325.1| Oryza sativa (japonica cultivar-group), mRNA 60 8e-06
38gb|AY463361.1| Oryza sativa (indica cultivar-group) benzothiadia... 60 8e-06
39dbj|AB188247.1| Oryza sativa (japonica cultivar-group) OsSERK1 m... 60 8e-06
40dbj|AB115767.1| Citrus unshiu SERK mRNA for somatic embryogenesi... 60 8e-06
41dbj|AK103038.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
42ref|XM_482638.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
43ref|XM_482637.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
44ref|XM_482636.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
45dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
46dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
47dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
48dbj|AK111984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
49dbj|AK111772.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
50dbj|AK073972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
51dbj|AK105576.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
52gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clon... 54 5e-04
53ref|NM_188526.1| Oryza sativa (japonica cultivar-group), Ozsa819... 48 0.029
54gb|AY162177.1| Medicago truncatula somatic embryogenesis recepto... 48 0.029
55gb|AY162176.1| Medicago truncatula somatic embryogenesis recepto... 48 0.029
56dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.029
57dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.029
58dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.029
59dbj|AK110821.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.029
60gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 48 0.029
61ref|NM_032727.2| Homo sapiens internexin neuronal intermediate f... 44 0.45
62emb|AJ833018.1| Schedonorus pratensis hd1 gene for putative Hd1-... 44 0.45
63emb|AL591408.19| Human DNA sequence from clone RP11-792D24 on ch... 44 0.45
64gb|S78296.1| neurofilament-66 [human, fetal brain, mRNA, 3197 nt] 44 0.45
65gb|BC006359.2| Homo sapiens internexin neuronal intermediate fil... 44 0.45
66ref|XM_463531.1| Oryza sativa (japonica cultivar-group), predic... 42 1.8
67dbj|AB188249.1| Oryza sativa (japonica cultivar-group) ORK1 gene... 42 1.8
68gb|AC007463.3| Homo sapiens BAC clone RP11-244L12 from 2, comple... 42 1.8
69dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
70dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
71dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
72gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 42 1.8
73dbj|D32045.1|RATGENOME Rat gene for alpha 1B adrenergic receptor... 42 1.8
74ref|XM_476607.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.0
75ref|XM_361443.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.0
76gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 7.0
77gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, co... 40 7.0
78gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence 40 7.0
79gb|AY524043.1| Micromonospora echinospora ATCC 15835 gentamicin ... 40 7.0
80gb|AC123830.5| Mus musculus BAC clone RP24-125B17 from chromosom... 40 7.0
81emb|BX649528.15| Zebrafish DNA sequence from clone DKEY-19F4 in ... 40 7.0
82emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.0
83emb|AJ575934.2|MPU575934 Micromonospora purpurea DOS biosyntheti... 40 7.0
84gb|AC096622.14| Mus musculus strain 129/SvJ clone mgs1-182e11, c... 40 7.0
85dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 7.0
86gb|AC008896.6| Homo sapiens chromosome 5 clone CTD-2235B13, comp... 40 7.0
87dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
88gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone m... 40 7.0
89dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.0
90dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.0
91dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
92dbj|AK106343.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
93dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
94emb|AJ628149.4| Micromonospora echinospora genomic region of the... 40 7.0
95gb|AC149587.5| Mus musculus BAC clone RP23-472J13 from 5, comple... 40 7.0 
>gb|BT009426.1| Triticum aestivum clone wlmk1.pk0023.a8:fis, full insert mRNA
            sequence
          Length = 2298

 Score =  412 bits (208), Expect = e-112
 Identities = 230/236 (97%), Gaps = 1/236 (0%)
 Strand = Plus / Minus

                                                                        
Query: 281  cctgttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatcc 340
            ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 2018 cctgttacctcgggccggacagctccaccgcccggaggttgtaggtggagtcgacgatcc 1959

                                                                        
Query: 341  agtcgttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccact 400
            ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1958 agtcgttgtttcgcggggccagctccgcctcctgccggaccacctccaccttctgccact 1899

                                                                        
Query: 401  cctcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgg 460
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1898 cctcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgg 1839

                                                                    
Query: 461  gccggtccatcggtgaccccctgcgtgcacagcagcgccacctggatcagcgcctc 516
            ||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1838 gccggtccatcggcga-cccctgcgtgcacagcagcgccacctggatcagcgcctc 1784



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 186  tctgtctgtcatcatgtacaaaagagagctagaaattctgcaacgaggggctg 238
            |||||| |||||||||||||||||||||||| |||||||| ||||||| ||||
Sbjct: 2116 tctgtcggtcatcatgtacaaaagagagctaaaaattctgaaacgaggcgctg 2064
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>ref|XM_472733.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1887

 Score =  291 bits (147), Expect = 1e-75
 Identities = 205/223 (91%), Gaps = 1/223 (0%)
 Strand = Plus / Minus

                                                                        
Query: 285  ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 344
            |||||||||||||||||||||||  |||||||| ||| | || |||||||||||||||||
Sbjct: 1887 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 1828

                                                                        
Query: 345  gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 404
            |||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1827 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 1768

                                                                        
Query: 405  ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 464
            ||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1767 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 1708

                                                       
Query: 465  gtccatcggtgaccccctgcgtgcacagcagcgccacctggat 507
            ||||||||| ||  ||||||||||| ||||| |||||||||||
Sbjct: 1707 gtccatcgggga-gccctgcgtgcagagcagagccacctggat 1666
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>emb|AJ277702.1|ZMA277702 Zea mays mRNA for SERK1 protein
          Length = 2068

 Score =  291 bits (147), Expect = 1e-75
 Identities = 208/227 (91%), Gaps = 1/227 (0%)
 Strand = Plus / Minus

                                                                        
Query: 286  tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 345
            ||||||||||||||||| || || |||| ||||||| | |||||||||||||||||||||
Sbjct: 1877 tacctcgggccggacagttcgacggccctgaggttgtaggtggagtcgacgatccagtcg 1818

                                                                        
Query: 346  ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 405
            ||||| ||||| || ||||||||||||||||| | |||||||||||||||||||| ||||
Sbjct: 1817 ttgtggcgcggggcgagctccgcctcctgccgcatcacctccaccttctgccactgctcc 1758

                                                                        
Query: 406  cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 465
            || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| 
Sbjct: 1757 caccgctccgccagcccgtcgccctccagcatccgcgccacctccgacatcttgggccgc 1698

                                                           
Query: 466  tccatcggtgaccccctgcgtgcacagcagcgccacctggatcagcg 512
            |||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 1697 tccatcgggga-gccctgcgtgcacagcagcgccacctggatcagcg 1652
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>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
             complete sequence
          Length = 138969

 Score =  291 bits (147), Expect = 1e-75
 Identities = 205/223 (91%), Gaps = 1/223 (0%)
 Strand = Plus / Plus

                                                                         
Query: 285   ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 344
             |||||||||||||||||||||||  |||||||| ||| | || |||||||||||||||||
Sbjct: 51112 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 51171

                                                                         
Query: 345   gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 404
             |||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51172 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 51231

                                                                         
Query: 405   ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 464
             ||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 51232 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 51291

                                                        
Query: 465   gtccatcggtgaccccctgcgtgcacagcagcgccacctggat 507
             ||||||||| ||  ||||||||||| ||||| |||||||||||
Sbjct: 51292 gtccatcgggga-gccctgcgtgcagagcagagccacctggat 51333
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>emb|AJ400868.1|ZMA400868 Zea mays serk1 gene for somatic embryogenesis receptor-like kinase 1,
            exons 1-11
          Length = 5715

 Score =  291 bits (147), Expect = 1e-75
 Identities = 208/227 (91%), Gaps = 1/227 (0%)
 Strand = Plus / Minus

                                                                        
Query: 286  tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 345
            ||||||||||||||||| || || |||| ||||||| | |||||||||||||||||||||
Sbjct: 4993 tacctcgggccggacagttcgacggccctgaggttgtaggtggagtcgacgatccagtcg 4934

                                                                        
Query: 346  ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 405
            ||||| ||||| || ||||||||||||||||| | |||||||||||||||||||| ||||
Sbjct: 4933 ttgtggcgcggggcgagctccgcctcctgccgcatcacctccaccttctgccactgctcc 4874

                                                                        
Query: 406  cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 465
            || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| 
Sbjct: 4873 caccgctccgccagcccgtcgccctccagcatccgcgccacctccgacatcttgggccgc 4814

                                                           
Query: 466  tccatcggtgaccccctgcgtgcacagcagcgccacctggatcagcg 512
            |||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 4813 tccatcgggga-gccctgcgtgcacagcagcgccacctggatcagcg 4768
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  291 bits (147), Expect = 1e-75
 Identities = 205/223 (91%), Gaps = 1/223 (0%)
 Strand = Plus / Plus

                                                                            
Query: 285      ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 344
                |||||||||||||||||||||||  |||||||| ||| | || |||||||||||||||||
Sbjct: 22842337 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 22842396

                                                                            
Query: 345      gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 404
                |||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22842397 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 22842456

                                                                            
Query: 405      ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 464
                ||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 22842457 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 22842516

                                                           
Query: 465      gtccatcggtgaccccctgcgtgcacagcagcgccacctggat 507
                ||||||||| ||  ||||||||||| ||||| |||||||||||
Sbjct: 22842517 gtccatcgggga-gccctgcgtgcagagcagagccacctggat 22842558
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>dbj|AK099777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095F19, full
            insert sequence
          Length = 2296

 Score =  291 bits (147), Expect = 1e-75
 Identities = 205/223 (91%), Gaps = 1/223 (0%)
 Strand = Plus / Minus

                                                                        
Query: 285  ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 344
            |||||||||||||||||||||||  |||||||| ||| | || |||||||||||||||||
Sbjct: 2089 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 2030

                                                                        
Query: 345  gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 404
            |||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2029 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 1970

                                                                        
Query: 405  ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 464
            ||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1969 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 1910

                                                       
Query: 465  gtccatcggtgaccccctgcgtgcacagcagcgccacctggat 507
            ||||||||| ||  ||||||||||| ||||| |||||||||||
Sbjct: 1909 gtccatcgggga-gccctgcgtgcagagcagagccacctggat 1868
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>dbj|AK105892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E09, full
           insert sequence
          Length = 1161

 Score =  291 bits (147), Expect = 1e-75
 Identities = 205/223 (91%), Gaps = 1/223 (0%)
 Strand = Plus / Minus

                                                                       
Query: 285 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 344
           |||||||||||||||||||||||  |||||||| ||| | || |||||||||||||||||
Sbjct: 832 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 773

                                                                       
Query: 345 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 404
           |||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 713

                                                                       
Query: 405 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 464
           ||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 653

                                                      
Query: 465 gtccatcggtgaccccctgcgtgcacagcagcgccacctggat 507
           ||||||||| ||  ||||||||||| ||||| |||||||||||
Sbjct: 652 gtccatcgggga-gccctgcgtgcagagcagagccacctggat 611
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>dbj|AK061767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B11, full
           insert sequence
          Length = 1161

 Score =  291 bits (147), Expect = 1e-75
 Identities = 205/223 (91%), Gaps = 1/223 (0%)
 Strand = Plus / Minus

                                                                       
Query: 285 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 344
           |||||||||||||||||||||||  |||||||| ||| | || |||||||||||||||||
Sbjct: 832 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 773

                                                                       
Query: 345 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 404
           |||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 713

                                                                       
Query: 405 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 464
           ||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 653

                                                      
Query: 465 gtccatcggtgaccccctgcgtgcacagcagcgccacctggat 507
           ||||||||| ||  ||||||||||| ||||| |||||||||||
Sbjct: 652 gtccatcgggga-gccctgcgtgcagagcagagccacctggat 611
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>gb|AY652735.1| Oryza sativa (japonica cultivar-group) somatic embryogenesis protein
            kinase 1 mRNA, complete cds
          Length = 2380

 Score =  283 bits (143), Expect = 3e-73
 Identities = 204/223 (91%), Gaps = 1/223 (0%)
 Strand = Plus / Minus

                                                                        
Query: 285  ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 344
            |||||||||||||||||||||||  |||||||| ||| | || |||||||||||||||||
Sbjct: 2007 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 1948

                                                                        
Query: 345  gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 404
            |||||| || || ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1947 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttttgccactcctc 1888

                                                                        
Query: 405  ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 464
            ||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1887 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 1828

                                                       
Query: 465  gtccatcggtgaccccctgcgtgcacagcagcgccacctggat 507
            ||||||||| ||  ||||||||||| ||||| |||||||||||
Sbjct: 1827 gtccatcgggga-gccctgcgtgcagagcagagccacctggat 1786
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>gb|BT009223.1| Triticum aestivum clone wle1n.pk0076.d4:fis, full insert mRNA
            sequence
          Length = 1651

 Score =  165 bits (83), Expect = 2e-37
 Identities = 186/219 (84%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 292  gggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcgttgtgt 351
            ||||| ||||| ||||| || ||||||||  | |||||||| || |||||||||||| | 
Sbjct: 1368 gggccagacagttccacggcgcggaggttatatgtggagtcaacaatccagtcgttgcga 1309

                                                                        
Query: 352  cgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcccagcgc 411
             | ||||||| ||| |||||||||| ||||||||||||||||||||| |||||||| | |
Sbjct: 1308 agaggagccaactctgcctcctgcctgaccacctccaccttctgccattcctcccatctc 1249

                                                                        
Query: 412  tccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccatc 471
            || ||||  ||||| || |||||||||||||| ||||||||||||||||| || ||||  
Sbjct: 1248 tctgccaagccgtcaccttccagcatcctcacgacctccgacatcttggggcgctccact 1189

                                                   
Query: 472  ggtgaccccctgcgtgcacagcagcgccacctggatcag 510
            || ||  |||||||||||||||||||| |||||||||||
Sbjct: 1188 ggcga-gccctgcgtgcacagcagcgctacctggatcag 1151
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>gb|AY110115.1| Zea mays CL444_1 mRNA sequence
          Length = 2474

 Score =  149 bits (75), Expect = 1e-32
 Identities = 184/219 (84%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 286  tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 345
            ||||| ||||||||||||||||| || || |||||| | ||||| |||||||||||||| 
Sbjct: 2114 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 2055

                                                                        
Query: 346  ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 405
            ||| |  |||| |||  ||| ||||||||||  |||||||| || |||||||| || |||
Sbjct: 2054 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 1995

                                                                        
Query: 406  cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 465
            || ||||| ||||||||||| || || |||||||||||||||||||||||||| || |||
Sbjct: 1994 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 1935

                                                   
Query: 466  tccatcggtgaccccctgcgtgcacagcagcgccacctg 504
            |||| ||| ||  ||||||||||| || || ||||||||
Sbjct: 1934 tccaacgggga-gccctgcgtgcagaggagtgccacctg 1897
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>emb|AJ277703.1|ZMA277703 Zea mays mRNA for SERK2 protein
          Length = 2077

 Score =  143 bits (72), Expect = 6e-31
 Identities = 156/184 (84%)
 Strand = Plus / Minus

                                                                        
Query: 286  tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 345
            ||||| ||||||||||||||||| || || |||||| | ||||| |||||||||||||| 
Sbjct: 1886 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 1827

                                                                        
Query: 346  ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 405
            ||| |  |||| |||  ||| ||||||||||  |||||||| || |||||||| || |||
Sbjct: 1826 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 1767

                                                                        
Query: 406  cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 465
            || ||||| ||||||||||| || || |||||||||||||||||||||||||| || |||
Sbjct: 1766 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 1707

                
Query: 466  tcca 469
            ||||
Sbjct: 1706 tcca 1703
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>emb|AJ400869.1|ZMA400869 Zea mays serk2 gene for somatic embryogenesis receptor-like kinase 2,
            exons 1-11
          Length = 5484

 Score =  143 bits (72), Expect = 6e-31
 Identities = 156/184 (84%)
 Strand = Plus / Minus

                                                                        
Query: 286  tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 345
            ||||| ||||||||||||||||| || || |||||| | ||||| |||||||||||||| 
Sbjct: 5019 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 4960

                                                                        
Query: 346  ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 405
            ||| |  |||| |||  ||| ||||||||||  |||||||| || |||||||| || |||
Sbjct: 4959 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 4900

                                                                        
Query: 406  cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 465
            || ||||| ||||||||||| || || |||||||||||||||||||||||||| || |||
Sbjct: 4899 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 4840

                
Query: 466  tcca 469
            ||||
Sbjct: 4839 tcca 4836
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>ref|XM_464966.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2415

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 381  cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 440
            ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| 
Sbjct: 1961 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 1902

                           
Query: 441  caccacctccgacat 455
             |||||||| |||||
Sbjct: 1901 aaccacctctgacat 1887
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>ref|XM_469440.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2503

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 381  cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 440
            ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| 
Sbjct: 2227 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 2168

                           
Query: 441  caccacctccgacat 455
            |||||||||||||||
Sbjct: 2167 caccacctccgacat 2153
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>ref|XM_469439.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2387

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 381  cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 440
            ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| 
Sbjct: 2037 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 1978

                           
Query: 441  caccacctccgacat 455
            |||||||||||||||
Sbjct: 1977 caccacctccgacat 1963
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>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08
             map R2847, complete sequence
          Length = 100918

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                         
Query: 381   cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 440
             ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| 
Sbjct: 95570 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 95629

                            
Query: 441   caccacctccgacat 455
             |||||||||||||||
Sbjct: 95630 caccacctccgacat 95644
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 381      cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 440
                ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| 
Sbjct: 27959842 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 27959901

                               
Query: 441      caccacctccgacat 455
                |||||||||||||||
Sbjct: 27959902 caccacctccgacat 27959916
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>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete
             sequence
          Length = 133889

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 381   cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 440
             ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| 
Sbjct: 65184 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 65125

                            
Query: 441   caccacctccgacat 455
             |||||||||||||||
Sbjct: 65124 caccacctccgacat 65110
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 381      cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 440
                ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| 
Sbjct: 28051166 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 28051225

                               
Query: 441      caccacctccgacat 455
                |||||||||||||||
Sbjct: 28051226 caccacctccgacat 28051240
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                            
Query: 381      cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 440
                ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| 
Sbjct: 10639696 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 10639637

                               
Query: 441      caccacctccgacat 455
                 |||||||| |||||
Sbjct: 10639636 aaccacctctgacat 10639622



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                            
Query: 403      tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 462
                ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| |||||
Sbjct: 30335181 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 30335240

                 
Query: 463      c 463
                |
Sbjct: 30335241 c 30335241



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 365      ccgcctcctgccggaccacct 385
                |||||||||||||||||||||
Sbjct: 24942555 ccgcctcctgccggaccacct 24942575
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>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0018M09
          Length = 157377

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 381   cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 440
             ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| 
Sbjct: 57386 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 57327

                            
Query: 441   caccacctccgacat 455
              |||||||| |||||
Sbjct: 57326 aaccacctctgacat 57312
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>dbj|AK111846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O14, full
            insert sequence
          Length = 2507

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 381  cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 440
            ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| 
Sbjct: 2231 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 2172

                           
Query: 441  caccacctccgacat 455
            |||||||||||||||
Sbjct: 2171 caccacctccgacat 2157
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>dbj|AK102120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084N08, full
            insert sequence
          Length = 2415

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 381  cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 440
            ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| 
Sbjct: 1961 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 1902

                           
Query: 441  caccacctccgacat 455
             |||||||| |||||
Sbjct: 1901 aaccacctctgacat 1887
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>dbj|AK066118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055F13, full
            insert sequence
          Length = 2968

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                       
Query: 381  cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcc 439
            ||||||||||| ||||||||||||||| |||||||||||||| ||||| || |||||||
Sbjct: 2476 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatcc 2418
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>gb|AY104736.1| Zea mays PCO086463 mRNA sequence
          Length = 1810

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                        
Query: 368  cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
            |||| ||||| ||||| || |||||||||||||||||||| | ||| || || || ||||
Sbjct: 1316 cctcttgccgtaccacttctaccttctgccactcctcccacctctcggcgagaccatcgc 1257

                                           
Query: 428  cctccagcatcctcaccacctccgacatctt 458
            | || ||||||||||| ||||||||||||||
Sbjct: 1256 cttcaagcatcctcacaacctccgacatctt 1226
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>gb|AY791293.2| Cocos nucifera somatic embryogenesis receptor kinase mRNA, complete
            cds
          Length = 1890

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 388  accttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctcaccacc 447
            ||||||||||| |||||||| | ||| || || || || || || |||||||||||||||
Sbjct: 1781 accttctgccattcctcccatctctcagcaaggccatcaccttcgagcatcctcaccacc 1722

                                   
Query: 448  tccgacatcttgggccggtccat 470
            || |||||||||||||| |||||
Sbjct: 1721 tctgacatcttgggccgctccat 1699
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>gb|AY106186.1| Zea mays PCO110698 mRNA sequence
          Length = 611

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                       
Query: 381 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 440
           ||||||||||| ||||||||||||||| | ||| || || || |||||||||||||||| 
Sbjct: 355 cacctccacctgctgccactcctcccacctctcggcgaggccctcgccctccagcatccg 296

                          
Query: 441 caccacctccgacat 455
            |||||||| |||||
Sbjct: 295 gaccacctcggacat 281
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>gb|AY108393.1| Zea mays PCO126676 mRNA sequence
          Length = 564

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                       
Query: 385 tccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctcacc 444
           ||||| |||||| || ||||||| | ||| || |||||||| |||||||||||||| | |
Sbjct: 277 tccacgttctgcgacgcctcccatctctcggcgagcccgtccccctccagcatcctgatc 218

                                 
Query: 445 acctccgacatcttgggccggt 466
           ||||| |||||| |||||||||
Sbjct: 217 acctcggacatcctgggccggt 196
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>ref|XM_480326.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4009

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                        
Query: 368  cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
            |||||||||| || || || | |||||||||||||||||| | ||| || || || || |
Sbjct: 3813 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 3754

                                           
Query: 428  cctccagcatcctcaccacctccgacatctt 458
            | || ||||||||||||||||||| ||||||
Sbjct: 3753 cttcaagcatcctcaccacctccgccatctt 3723
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                           
Query: 368     cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
               |||||||||| || || || | |||||||||||||||||| | ||| || || || || |
Sbjct: 4354825 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 4354766

                                              
Query: 428     cctccagcatcctcaccacctccgacatctt 458
               | || ||||||||||||||||||| ||||||
Sbjct: 4354765 cttcaagcatcctcaccacctccgccatctt 4354735



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 78/94 (82%)
 Strand = Plus / Minus

                                                                           
Query: 368     cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
               |||||||||| || || || | |||||||||||||||||| | ||| || || || || |
Sbjct: 4343521 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 4343462

                                                 
Query: 428     cctccagcatcctcaccacctccgacatcttggg 461
               | || ||||||||||| ||||||| |||||||||
Sbjct: 4343461 cttcaagcatcctcacaacctccgccatcttggg 4343428



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                                 
Query: 418      agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 466
                |||||||| |||||||||||||  ||||||||||||||| | |||||||
Sbjct: 21571634 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 21571682



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 433     agcatcctcaccacctccgacatcttggg 461
               ||||||||||||||||||  |||||||||
Sbjct: 4438935 agcatcctcaccacctccaccatcttggg 4438907
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>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0054L03
          Length = 183623

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                          
Query: 368    cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
              |||||||||| || || || | |||||||||||||||||| | ||| || || || || |
Sbjct: 117619 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 117560

                                             
Query: 428    cctccagcatcctcaccacctccgacatctt 458
              | || ||||||||||||||||||| ||||||
Sbjct: 117559 cttcaagcatcctcaccacctccgccatctt 117529



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 78/94 (82%)
 Strand = Plus / Minus

                                                                          
Query: 368    cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
              |||||||||| || || || | |||||||||||||||||| | ||| || || || || |
Sbjct: 106315 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 106256

                                                
Query: 428    cctccagcatcctcaccacctccgacatcttggg 461
              | || ||||||||||| ||||||| |||||||||
Sbjct: 106255 cttcaagcatcctcacaacctccgccatcttggg 106222
to top
>dbj|AP003882.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1134_B10
          Length = 115074

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                        
Query: 368  cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
            |||||||||| || || || | |||||||||||||||||| | ||| || || || || |
Sbjct: 2001 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1942

                                           
Query: 428  cctccagcatcctcaccacctccgacatctt 458
            | || ||||||||||||||||||| ||||||
Sbjct: 1941 cttcaagcatcctcaccacctccgccatctt 1911



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 433   agcatcctcaccacctccgacatcttggg 461
             ||||||||||||||||||  |||||||||
Sbjct: 86111 agcatcctcaccacctccaccatcttggg 86083
to top
>dbj|AK071471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095L06, full
            insert sequence
          Length = 4009

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                        
Query: 368  cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
            |||||||||| || || || | |||||||||||||||||| | ||| || || || || |
Sbjct: 3813 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 3754

                                           
Query: 428  cctccagcatcctcaccacctccgacatctt 458
            | || ||||||||||||||||||| ||||||
Sbjct: 3753 cttcaagcatcctcaccacctccgccatctt 3723
to top
>dbj|AK060589.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C11, full
            insert sequence
          Length = 1782

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                        
Query: 368  cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
            |||||||||| || || || | |||||||||||||||||| | ||| || || || || |
Sbjct: 1559 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1500

                                           
Query: 428  cctccagcatcctcaccacctccgacatctt 458
            | || ||||||||||||||||||| ||||||
Sbjct: 1499 cttcaagcatcctcaccacctccgccatctt 1469
to top
>ref|XM_480325.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2674

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 78/94 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
            |||||||||| || || || | |||||||||||||||||| | ||| || || || || |
Sbjct: 2074 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 2015

                                              
Query: 428  cctccagcatcctcaccacctccgacatcttggg 461
            | || ||||||||||| ||||||| |||||||||
Sbjct: 2014 cttcaagcatcctcacaacctccgccatcttggg 1981
to top
>gb|AY463361.1| Oryza sativa (indica cultivar-group) benzothiadiazole-induced somatic
            embryogenesis receptor kinase 1 (BISERK1) mRNA, complete
            cds
          Length = 2351

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 78/94 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
            |||||||||| || || || | |||||||||||||||||| | ||| || || || || |
Sbjct: 1892 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1833

                                              
Query: 428  cctccagcatcctcaccacctccgacatcttggg 461
            | || ||||||||||| ||||||| |||||||||
Sbjct: 1832 cttcaagcatcctcacaacctccgccatcttggg 1799
to top
>dbj|AB188247.1| Oryza sativa (japonica cultivar-group) OsSERK1 mRNA for SERK-family
            receptor-like protein kinase, complete cds
          Length = 2674

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 78/94 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
            |||||||||| || || || | |||||||||||||||||| | ||| || || || || |
Sbjct: 2019 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1960

                                              
Query: 428  cctccagcatcctcaccacctccgacatcttggg 461
            | || ||||||||||| ||||||| |||||||||
Sbjct: 1959 cttcaagcatcctcacaacctccgccatcttggg 1926
to top
>dbj|AB115767.1| Citrus unshiu SERK mRNA for somatic embryogenesis receptor kinase 1,
            complete cds
          Length = 1866

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 385  tccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctcacc 444
            |||||||| |||||||| ||||| ||||| ||||  || || || || ||||| || || 
Sbjct: 1763 tccaccttttgccactcatcccaccgctctgccaagccatcaccttcaagcattctaaca 1704

                                      
Query: 445  acctccgacatcttgggccggtccat 470
            || |||||||||||||||||||||||
Sbjct: 1703 acttccgacatcttgggccggtccat 1678
to top
>dbj|AK103038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117E16, full
            insert sequence
          Length = 2674

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 78/94 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 427
            |||||||||| || || || | |||||||||||||||||| | ||| || || || || |
Sbjct: 2074 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 2015

                                              
Query: 428  cctccagcatcctcaccacctccgacatcttggg 461
            | || ||||||||||| ||||||| |||||||||
Sbjct: 2014 cttcaagcatcctcacaacctccgccatcttggg 1981
to top
>ref|XM_482638.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2671

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 418  agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 466
            |||||||| |||||||||||||  ||||||||||||||| | |||||||
Sbjct: 1960 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1912
to top
>ref|XM_482637.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2158

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 418  agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 466
            |||||||| |||||||||||||  ||||||||||||||| | |||||||
Sbjct: 1311 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1263
to top
>ref|XM_482636.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1431

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                             
Query: 418  agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 466
            |||||||| |||||||||||||  ||||||||||||||| | |||||||
Sbjct: 1167 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1215
to top
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0072H09
          Length = 160541

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 403   tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 462
             ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| |||||
Sbjct: 16041 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 16100

              
Query: 463   c 463
             |
Sbjct: 16101 c 16101
to top
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1121A12
          Length = 138796

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                          
Query: 403    tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 462
              ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| |||||
Sbjct: 136098 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 136157

               
Query: 463    c 463
              |
Sbjct: 136158 c 136158
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>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0708B04
          Length = 170523

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 418   agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 466
             |||||||| |||||||||||||  ||||||||||||||| | |||||||
Sbjct: 31808 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 31856
to top
>dbj|AK111984.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F05, full
            insert sequence
          Length = 2158

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 418  agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 466
            |||||||| |||||||||||||  ||||||||||||||| | |||||||
Sbjct: 1311 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1263
to top
>dbj|AK111772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067P10, full
            insert sequence
          Length = 2671

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 418  agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 466
            |||||||| |||||||||||||  ||||||||||||||| | |||||||
Sbjct: 1960 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1912
to top
>dbj|AK073972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072J21, full
            insert sequence
          Length = 2639

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 403  tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 462
            ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| |||||
Sbjct: 2092 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 2033

             
Query: 463  c 463
            |
Sbjct: 2032 c 2032
to top
>dbj|AK105576.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-D11, full
            insert sequence
          Length = 1432

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 419  gcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 466
            ||||||| |||||||||||||  ||||||||||||||| | |||||||
Sbjct: 1169 gcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1216
to top
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete
             sequence
          Length = 106476

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 382   acctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctc 441
             |||||||| || |||||||| ||||| | |||||| ||||| || || ||||||||||||
Sbjct: 81304 acctccacgttttgccactcttcccacctctccgcaagcccttctccttccagcatcctc 81363

                            
Query: 442   accacctccgacatc 456
             || || || ||||||
Sbjct: 81364 acaacttcagacatc 81378
to top
>ref|NM_188526.1| Oryza sativa (japonica cultivar-group), Ozsa8195 predicted mRNA
          Length = 1926

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 433  agcatcctcaccacctccgacatcttgggccg 464
            |||||||||||||| ||||||||||| |||||
Sbjct: 1820 agcatcctcaccacgtccgacatcttaggccg 1789
to top
>gb|AY162177.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1)
            gene, complete cds
          Length = 4206

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 70/84 (83%), Gaps = 1/84 (1%)
 Strand = Plus / Minus

                                                                        
Query: 424  tcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggtgaccccctg 483
            ||||| || ||||| ||||| || || |||||||| ||||||||||| || ||  || ||
Sbjct: 4002 tcgccttcaagcattctcactacatctgacatctttggccggtccataggcga-accttg 3944

                                    
Query: 484  cgtgcacagcagcgccacctggat 507
            |||||| |||||||| ||||||||
Sbjct: 3943 cgtgcatagcagcgcaacctggat 3920
to top
>gb|AY162176.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1)
            mRNA, complete cds
          Length = 2392

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 70/84 (83%), Gaps = 1/84 (1%)
 Strand = Plus / Minus

                                                                        
Query: 424  tcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggtgaccccctg 483
            ||||| || ||||| ||||| || || |||||||| ||||||||||| || ||  || ||
Sbjct: 1972 tcgccttcaagcattctcactacatctgacatctttggccggtccataggcga-accttg 1914

                                    
Query: 484  cgtgcacagcagcgccacctggat 507
            |||||| |||||||| ||||||||
Sbjct: 1913 cgtgcatagcagcgcaacctggat 1890
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 433     agcatcctcaccacctccgacatcttgggccg 464
               |||||||||||||| ||||||||||| |||||
Sbjct: 6765867 agcatcctcaccacgtccgacatcttaggccg 6765898



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 423      gtcgccctccagcatcctcaccacctccg 451
                |||||||||||||||||||| | ||||||
Sbjct: 38314121 gtcgccctccagcatcctcagcgcctccg 38314093
to top
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0443E05
          Length = 176935

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 433    agcatcctcaccacctccgacatcttgggccg 464
              |||||||||||||| ||||||||||| |||||
Sbjct: 118019 agcatcctcaccacgtccgacatcttaggccg 118050
to top
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0417G05
          Length = 147803

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 433   agcatcctcaccacctccgacatcttgggccg 464
             |||||||||||||| ||||||||||| |||||
Sbjct: 47928 agcatcctcaccacgtccgacatcttaggccg 47959
to top
>dbj|AK110821.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-H01, full
            insert sequence
          Length = 1730

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 433  agcatcctcaccacctccgacatcttgggccg 464
            |||||||||||||| ||||||||||| |||||
Sbjct: 1374 agcatcctcaccacgtccgacatcttaggccg 1343
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 426     gccctccagcatcctcaccacctc 449
               ||||||||||||||||||||||||
Sbjct: 3780962 gccctccagcatcctcaccacctc 3780985



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 358     gccagctccgcctcctgccgg 378
               |||||||||||||||||||||
Sbjct: 4036418 gccagctccgcctcctgccgg 4036438
to top
>ref|NM_032727.2| Homo sapiens internexin neuronal intermediate filament protein,
           alpha (INA), mRNA
          Length = 3243

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 411 ctccgccagcccgtcgccctccagca 436
           ||||||||||||||||| ||||||||
Sbjct: 568 ctccgccagcccgtcgcgctccagca 543
to top
>emb|AJ833018.1| Schedonorus pratensis hd1 gene for putative Hd1-like protein and
           s2539 gene for putative peroxidase
          Length = 9329

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 409 cgctccgccagcccgtcgccctccagcatcctcaccacctccgacatctt 458
           ||||| || ||||||||||| |||||||| |  |||||||| ||||||||
Sbjct: 157 cgctctgcaagcccgtcgccttccagcatgcggaccacctctgacatctt 108
to top
>emb|AL591408.19| Human DNA sequence from clone RP11-792D24 on chromosome 10 Contains the
             INA gene for internexin neuronal intermediate filament
             protein alpha, the RNF134 gene for ring finger protein
             134, the TAF5D gene for 100 kD TAF5 RNA polymerase II TATA
             box binding protein (TBP)-associated factor, a novel gene,
             the 5' end of the PDCD11 gene for programmed cell death 11
             and four CpG islands, complete sequence
          Length = 174474

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 411   ctccgccagcccgtcgccctccagca 436
             ||||||||||||||||| ||||||||
Sbjct: 29659 ctccgccagcccgtcgcgctccagca 29634
to top
>gb|S78296.1| neurofilament-66 [human, fetal brain, mRNA, 3197 nt]
          Length = 3197

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 411 ctccgccagcccgtcgccctccagca 436
           ||||||||||||||||| ||||||||
Sbjct: 555 ctccgccagcccgtcgcgctccagca 530
to top
>gb|BC006359.2| Homo sapiens internexin neuronal intermediate filament protein,
           alpha, mRNA (cDNA clone MGC:12702 IMAGE:4125949),
           complete cds
          Length = 3243

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 411 ctccgccagcccgtcgccctccagca 436
           ||||||||||||||||| ||||||||
Sbjct: 568 ctccgccagcccgtcgcgctccagca 543
to top
>ref|XM_463531.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1941

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 423  gtcgccctccagcatcctcaccacctccg 451
            |||||||||||||||||||| | ||||||
Sbjct: 1803 gtcgccctccagcatcctcagcgcctccg 1775
to top
>dbj|AB188249.1| Oryza sativa (japonica cultivar-group) ORK1 gene for SERK family
            receptor-like protein kinase, partial cds
          Length = 5675

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 433  agcatcctcaccacctccgacatcttggg 461
            ||||||||||||||||||  |||||||||
Sbjct: 2044 agcatcctcaccacctccaccatcttggg 2016
to top
>gb|AC007463.3| Homo sapiens BAC clone RP11-244L12 from 2, complete sequence
          Length = 166892

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 385    tccaccttctgccactcctcc 405
              |||||||||||||||||||||
Sbjct: 148192 tccaccttctgccactcctcc 148212
to top
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1065E10
          Length = 183580

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 423   gtcgccctccagcatcctcaccacctccg 451
             |||||||||||||||||||| | ||||||
Sbjct: 74946 gtcgccctccagcatcctcagcgcctccg 74918
to top
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1215B07
          Length = 165957

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 365    ccgcctcctgccggaccacct 385
              |||||||||||||||||||||
Sbjct: 103838 ccgcctcctgccggaccacct 103858
to top
>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0583B06
          Length = 134442

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 433  agcatcctcaccacctccgacatcttggg 461
            ||||||||||||||||||  |||||||||
Sbjct: 4825 agcatcctcaccacctccaccatcttggg 4797
to top
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 468    catcggtgaccccctgcgtgcacag 492
              |||| ||||||||||||||||||||
Sbjct: 554967 catccgtgaccccctgcgtgcacag 554943
to top
>dbj|D32045.1|RATGENOME Rat gene for alpha 1B adrenergic receptor, promoter region and
            partial cds
          Length = 2387

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 399  ctcctcccagcgctccgccagcccg 423
            |||||||||||| ||||||||||||
Sbjct: 1322 ctcctcccagcgttccgccagcccg 1346
to top
>ref|XM_476607.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1456

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 424  tcgccctccagcatcctcaccacc 447
            ||||||||||||||| ||||||||
Sbjct: 1213 tcgccctccagcatcttcaccacc 1190
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>ref|XM_361443.1| Magnaporthe grisea 70-15 hypothetical protein (MG03917.4) partial
            mRNA
          Length = 4320

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  ccagcccgtcgccctccagc 435
            ||||||||||||||||||||
Sbjct: 1015 ccagcccgtcgccctccagc 996
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 356     gagccagctccgcctcctgccgga 379
               ||||||||||||| ||||||||||
Sbjct: 2284559 gagccagctccgcttcctgccgga 2284536
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>gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, complete sequence
          Length = 205291

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    cttctgccactcctcccagc 409
              ||||||||||||||||||||
Sbjct: 134441 cttctgccactcctcccagc 134422
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>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                              
Query: 411    ctccgccagcccgtcgccctccagcatcctcaccacctccgacatctt 458
              |||||| ||||| || || ||||||||||| ||||| || ||||||||
Sbjct: 116521 ctccgcaagcccatctccttccagcatcctaaccacttctgacatctt 116474
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>gb|AY524043.1| Micromonospora echinospora ATCC 15835 gentamicin biosynthesis gene
             cluster, complete sequence
          Length = 38146

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   cagctccgcctcctgccgga 379
             ||||||||||||||||||||
Sbjct: 30386 cagctccgcctcctgccgga 30405
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>gb|AC123830.5| Mus musculus BAC clone RP24-125B17 from chromosome 7, complete sequence
          Length = 186045

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   ccaccttctgccactcctcc 405
             ||||||||||||||||||||
Sbjct: 67005 ccaccttctgccactcctcc 67024
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>emb|BX649528.15| Zebrafish DNA sequence from clone DKEY-19F4 in linkage group 5, complete
              sequence
          Length = 205281

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    ggactctgtctgtcatcatg 201
              ||||||||||||||||||||
Sbjct: 169143 ggactctgtctgtcatcatg 169124
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 386    ccaccttctgccactcctcccagc 409
              |||||||||||| |||||||||||
Sbjct: 247937 ccaccttctgcccctcctcccagc 247914
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>emb|AJ575934.2|MPU575934 Micromonospora purpurea DOS biosynthetic gene cluster
          Length = 32668

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  cagctccgcctcctgccgga 379
            ||||||||||||||||||||
Sbjct: 6107 cagctccgcctcctgccgga 6088
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>gb|AC096622.14| Mus musculus strain 129/SvJ clone mgs1-182e11, complete sequence
          Length = 131919

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   cttctgccactcctcccagc 409
             ||||||||||||||||||||
Sbjct: 32187 cttctgccactcctcccagc 32206
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 490     cagcagcgccacctggatcagcgc 513
               |||||||| |||||||||||||||
Sbjct: 1286681 cagcagcggcacctggatcagcgc 1286658
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>gb|AC008896.6| Homo sapiens chromosome 5 clone CTD-2235B13, complete sequence
          Length = 128624

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 212    agctagaaattctgcaacgagggg 235
              |||||||||||||| |||||||||
Sbjct: 101989 agctagaaattctgaaacgagggg 102012
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 424     tcgccctccagcatcctcaccacc 447
               ||||||||||||||| ||||||||
Sbjct: 2160859 tcgccctccagcatcttcaccacc 2160882
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>gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone mgs1-30a13, complete
              sequence
          Length = 196824

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    cttctgccactcctcccagc 409
              ||||||||||||||||||||
Sbjct: 104709 cttctgccactcctcccagc 104690
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 408     gcgctccgccagcccgtcgccctccagc 435
               ||||||| |||||||||||| |||||||
Sbjct: 3745076 gcgctccaccagcccgtcgcgctccagc 3745103
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 431     ccagcatcctcaccacctcc 450
               ||||||||||||||||||||
Sbjct: 2270008 ccagcatcctcaccacctcc 2269989
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>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 424   tcgccctccagcatcctcaccacc 447
             ||||||||||||||| ||||||||
Sbjct: 28761 tcgccctccagcatcttcaccacc 28784
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>dbj|AK106343.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G11, full
            insert sequence
          Length = 1456

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 424  tcgccctccagcatcctcaccacc 447
            ||||||||||||||| ||||||||
Sbjct: 1213 tcgccctccagcatcttcaccacc 1190
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>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1417_E01
          Length = 118058

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 424    tcgccctccagcatcctcaccacc 447
              ||||||||||||||| ||||||||
Sbjct: 116652 tcgccctccagcatcttcaccacc 116675
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>emb|AJ628149.4| Micromonospora echinospora genomic region of the gentamicin
             biosynthesis gene cluster, strain DSM 43036
          Length = 84222

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   cagctccgcctcctgccgga 379
             ||||||||||||||||||||
Sbjct: 42630 cagctccgcctcctgccgga 42649
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>gb|AC149587.5| Mus musculus BAC clone RP23-472J13 from 5, complete sequence
          Length = 188522

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   ccagctccgcctcctgccgg 378
             ||||||||||||||||||||
Sbjct: 92333 ccagctccgcctcctgccgg 92314


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,377,290
Number of Sequences: 3902068
Number of extensions: 4377290
Number of successful extensions: 106833
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 106021
Number of HSP's gapped (non-prelim): 802
length of query: 516
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 493
effective length of database: 17,143,297,704
effective search space: 8451645768072
effective search space used: 8451645768072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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