ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd0b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IF33_ARATH (Q9C5Z2) Eukaryotic translation initiation factor 3 s... 194 2e-49
2IF33_HUMAN (O15372) Eukaryotic translation initiation factor 3 s... 96 5e-20
3IF33_MOUSE (Q91WK2) Eukaryotic translation initiation factor 3 s... 94 2e-19
4IF33_BOVIN (Q56JZ5) Eukaryotic translation initiation factor 3 s... 94 2e-19
5YHW1_YEAST (P38856) Hypothetical 71.7 kDa protein in REC104-SOL3... 34 0.30
6DRI_DROME (Q24573) Protein dead ringer (Protein retained) 32 0.88
7PRP5_DEBHA (Q6BML1) Pre-mRNA-processing ATP-dependent RNA helica... 32 1.1
8GLT_DROME (P33438) Glutactin precursor 32 1.1
9YN91_SCHPO (Q9Y808) Hypothetical protein C146.01 in chromosome II 31 2.0
10MED12_HUMAN (Q93074) Mediator of RNA polymerase II transcription... 31 2.0
11RAS_CRYNE (O74650) Ras-like protein 31 2.6
12NUMBL_HUMAN (Q9Y6R0) Numb-like protein (Numb-R) 31 2.6
13FLHA_BUCBP (Q89AN5) Flagellar biosynthesis protein flhA 31 2.6
14FX4L1_HUMAN (Q9NU39) Forkhead box protein D4-like 1 30 3.3
15CMTA2_MOUSE (Q80Y50) Calmodulin-binding transcription activator 2 30 4.4
16CJ084_PONPY (Q5R939) Protein C10orf84 homolog 30 4.4
17CJ084_HUMAN (Q9H8W3) Protein C10orf84 30 4.4
18CYSP1_DICDI (P04988) Cysteine proteinase 1 precursor (EC 3.4.22.-) 29 7.5
19BSN_RAT (O88778) Bassoon protein 29 7.5
20BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain ... 29 7.5
21INVO_TARBA (P24711) Involucrin 29 7.5
22YKF4_YEAST (P35732) Hypothetical 84.0 kDa protein in NUP120-CSE4... 29 7.5
23CDX1_RAT (Q05095) Homeobox protein CDX-1 (Caudal-type homeobox p... 29 7.5
24CBK1_YARLI (Q6CFS5) Serine/threonine-protein kinase CBK1 (EC 2.7... 29 9.7
25HUNB_DROOR (O62537) Protein hunchback 29 9.7
26UPPP_SYNY3 (Q55684) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Un... 29 9.7
27LNT_PSEAE (Q9ZI86) Apolipoprotein N-acyltransferase (EC 2.3.1.-)... 29 9.7
28CLA4_YEAST (P48562) Serine/threonine-protein kinase CLA4 (EC 2.7... 29 9.7
29LGR6_HUMAN (Q9HBX8) Leucine-rich repeat-containing G-protein cou... 29 9.7
30CAP7_ARATH (Q9LVD8) Putative clathrin assembly protein At5g57200 29 9.7

>IF33_ARATH (Q9C5Z2) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h)
          Length = 337

 Score =  194 bits (492), Expect = 2e-49
 Identities = 88/118 (74%), Positives = 104/118 (88%)
 Frame = -1

Query: 539 STAPFMERNLEFMIGCMDGLSSEQNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAGE 360
           ST PF+E N+EF+I CMD LS EQ KFQYYYRNL RQQ+QQQAWLQKRR ENM+RK+AGE
Sbjct: 220 STTPFLENNMEFLIKCMDDLSMEQQKFQYYYRNLSRQQAQQQAWLQKRRTENMARKSAGE 279

Query: 359 EPLPEEDPSNPIFKPLPEPSRLEGYLVTNQISSYCNHINGVAGQSFNRLYLMKALQED 186
           EPLPEEDPSNPIFK +PEPSRLE +L+TNQ+S++C  INGVAGQ+F+RLYL KAL ++
Sbjct: 280 EPLPEEDPSNPIFKAIPEPSRLESFLITNQVSNFCGQINGVAGQNFSRLYLTKALHDN 337



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>IF33_HUMAN (O15372) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h)
          Length = 352

 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 45/118 (38%), Positives = 77/118 (65%)
 Frame = -1

Query: 542 LSTAPFMERNLEFMIGCMDGLSSEQNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAG 363
           L+++  + +NL+ ++  +D +S +  K+  Y RN  +QQ Q+  + Q+R+QENM R++ G
Sbjct: 233 LASSNHLGKNLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRG 292

Query: 362 EEPLPEEDPSNPIFKPLPEPSRLEGYLVTNQISSYCNHINGVAGQSFNRLYLMKALQE 189
           E PLPEED S  +FKP   P+R++  L+  QI++YC +I     Q+  +L++ +ALQE
Sbjct: 293 EPPLPEEDLSK-LFKPPQPPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQE 349



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>IF33_MOUSE (Q91WK2) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h)
          Length = 352

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 44/118 (37%), Positives = 77/118 (65%)
 Frame = -1

Query: 542 LSTAPFMERNLEFMIGCMDGLSSEQNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAG 363
           L+++  + ++L+ ++  +D +S +  K+  Y RN  +QQ Q+  + Q+R+QENM R++ G
Sbjct: 233 LASSNHLGKSLQLLMDRVDEMSQDIIKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRG 292

Query: 362 EEPLPEEDPSNPIFKPLPEPSRLEGYLVTNQISSYCNHINGVAGQSFNRLYLMKALQE 189
           E PLPEED S  +FKP   P+R++  L+  QI++YC +I     Q+  +L++ +ALQE
Sbjct: 293 EPPLPEEDLSK-LFKPHQAPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQE 349



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>IF33_BOVIN (Q56JZ5) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma)
          Length = 352

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 44/118 (37%), Positives = 76/118 (64%)
 Frame = -1

Query: 542 LSTAPFMERNLEFMIGCMDGLSSEQNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAG 363
           L+++  + + L+ ++  +D +S +  K+  Y RN  +QQ Q+  + Q+R+QENM R++ G
Sbjct: 233 LASSNHLGKTLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRG 292

Query: 362 EEPLPEEDPSNPIFKPLPEPSRLEGYLVTNQISSYCNHINGVAGQSFNRLYLMKALQE 189
           E PLPEED S  +FKP   P+R++  L+  QI++YC +I     Q+  +L++ +ALQE
Sbjct: 293 EPPLPEEDLSK-LFKPHQPPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQE 349



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>YHW1_YEAST (P38856) Hypothetical 71.7 kDa protein in REC104-SOL3 intergenic|
           region
          Length = 637

 Score = 33.9 bits (76), Expect = 0.30
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
 Frame = -1

Query: 473 EQNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRK------AAGEEPL--------PEEDP 336
           ++ +FQ +Y     QQ QQQ   Q+++Q+   ++       AG  P+        P+  P
Sbjct: 546 DKMEFQAHYTQNHLQQQQQQQQQQQQQQQQQPQQGYYVPATAGANPVTNITGTVQPQNFP 605

Query: 335 SNPIFKPLPEPSRLEGYLVTNQISSYCNHIN 243
             P  +P PE S+ +  ++ NQ   Y N++N
Sbjct: 606 FYPQQQPQPEQSQTQQPVLGNQ---YANNLN 633



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>DRI_DROME (Q24573) Protein dead ringer (Protein retained)|
          Length = 911

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -1

Query: 479 SSEQNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAGEEPL 351
           S +Q + Q++++   +QQSQQQ  LQ++RQ + S   +  E L
Sbjct: 517 SQQQQQQQHHHQQQQQQQSQQQHHLQQQRQRSQSPDLSKHEAL 559



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>PRP5_DEBHA (Q6BML1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 913

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = -1

Query: 440 LGRQQSQQQAWLQKRRQENMSRKAAGEEPLPEEDPSNPIFKPLPEPSRLE 291
           L R+Q Q  AW+QKR+QEN  ++ +G+  +   D +N   + L    R+E
Sbjct: 50  LKRRQEQLAAWMQKRQQEN--QEPSGKVTISATDETNIDKEKLIRQQRIE 97



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>GLT_DROME (P33438) Glutactin precursor|
          Length = 1026

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = -1

Query: 476 SEQNKFQYYYRNLGRQQSQQQA-----WLQKRRQENMSRKAAGEEPLPEEDPS 333
           SE+++ Q     L R+Q +QQ       L++ +QE   ++   +EP PEE PS
Sbjct: 812 SEEDREQQQQEQLRREQQEQQEREYQLQLEREQQEREQQERGQQEPGPEEYPS 864



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>YN91_SCHPO (Q9Y808) Hypothetical protein C146.01 in chromosome II|
          Length = 1063

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/97 (22%), Positives = 43/97 (44%)
 Frame = -1

Query: 482 LSSEQNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAGEEPLPEEDPSNPIFKPLPEP 303
           L+ +Q +F      + +Q+ QQQ   Q+ +Q    + ++   P  E +      +    P
Sbjct: 140 LTPQQRQFLLQQSQIQQQRQQQQQQSQQPQQTQQPQASSPTAPNTEANQQ----RSGSVP 195

Query: 302 SRLEGYLVTNQISSYCNHINGVAGQSFNRLYLMKALQ 192
            R+   L   Q+++ CN I  +  ++ N    M+ LQ
Sbjct: 196 GRIVPALTQQQLNNLCNQITALLARNGNPPIPMQKLQ 232



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>MED12_HUMAN (Q93074) Mediator of RNA polymerase II transcription subunit 12|
            (Thyroid hormone receptor-associated protein complex 230
            kDa component) (Trap230) (Activator-recruited cofactor
            240 kDa component) (ARC240) (CAG repeat protein 45)
            (OPA-containin
          Length = 2212

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -1

Query: 473  EQNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAGEEPLPEEDP 336
            +Q + Q   +   +QQ QQQ   Q++ Q+   ++AA  +P P+  P
Sbjct: 2125 QQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQP 2170



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>RAS_CRYNE (O74650) Ras-like protein|
          Length = 216

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -3

Query: 459 PILLSQPRKATVTATGMASKEKAREHVEKGCWRGAV 352
           P  ++ P K+ ++A G  + EK  +HV+KGC RG V
Sbjct: 180 PQAVNAPAKSQMSAVGGRAAEKD-DHVDKGCCRGCV 214



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>NUMBL_HUMAN (Q9Y6R0) Numb-like protein (Numb-R)|
          Length = 609

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -1

Query: 431 QQSQQQAWLQKRRQENMSRKAAGEEPLPEEDPSNPIFKPLPEP 303
           QQ QQQ   Q+++Q+   ++AA   P+P   P+    +P P P
Sbjct: 427 QQQQQQQQQQQQQQQQQQQQAASVAPVPTMPPA---LQPFPAP 466



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>FLHA_BUCBP (Q89AN5) Flagellar biosynthesis protein flhA|
          Length = 702

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 11/56 (19%)
 Frame = -1

Query: 380 SRKAAGEEPLPEEDPSNPIFK--------PLPEPSRLEGYLVTNQ---ISSYCNHI 246
           S  A+G  PLP E+ S+PIFK         L   ++ +GY +      IS++ NHI
Sbjct: 446 SGNASGPLPLPAEETSDPIFKFKSFWITSELINQAKQKGYNIAEDSTVISTHLNHI 501



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>FX4L1_HUMAN (Q9NU39) Forkhead box protein D4-like 1|
          Length = 408

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -3

Query: 486 WSFIRAKQVPILLSQPRKATVTATGMASKEKAREHVEKGCWRGAVAR 346
           WS+    Q P  LS    AT  A+G   +++ R H  +G  R  V R
Sbjct: 349 WSYCPLLQRPSSLSDNFAATAAASGGGLRQRLRSHQGRGAGRAPVGR 395



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>CMTA2_MOUSE (Q80Y50) Calmodulin-binding transcription activator 2|
          Length = 1208

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 25/94 (26%), Positives = 42/94 (44%)
 Frame = -1

Query: 470  QNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAGEEPLPEEDPSNPIFKPLPEPSRLE 291
            Q+KF+ YY     QQS++ A L ++   +  R+     P P   PS P+      P+R +
Sbjct: 1115 QSKFRSYYEQKRFQQSRRAAVLIQQHYRSYRRR-----PGPPHRPSGPL------PARNK 1163

Query: 290  GYLVTNQISSYCNHINGVAGQSFNRLYLMKALQE 189
            G  +T +       I     +  +R+  +K  QE
Sbjct: 1164 GTFLTKKQDQAARKIMRFLRRCRHRMRELKQNQE 1197



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>CJ084_PONPY (Q5R939) Protein C10orf84 homolog|
          Length = 233

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -1

Query: 521 ERNLEFMIGCMDGLSSEQ-NKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAGEEPLPE 345
           E N+     C  G+  +  NKFQ  ++    Q+S    +  KRR+ +   K   E+ L  
Sbjct: 59  ESNVNAYEECPSGIPIDMWNKFQELHKKHSEQKSTTSRFRGKRRKRSRKDKLKNEKELHS 118

Query: 344 EDPSN 330
           E  SN
Sbjct: 119 EPSSN 123



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>CJ084_HUMAN (Q9H8W3) Protein C10orf84|
          Length = 233

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -1

Query: 521 ERNLEFMIGCMDGLSSEQ-NKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAGEEPLPE 345
           E N+     C  G+  +  NKFQ  ++    Q+S    +  KRR+ +   K   E+ L  
Sbjct: 59  ESNVNAYEECPSGIPIDMWNKFQELHKKHSEQKSTTSRFRGKRRKRSRKDKLKNEKELHS 118

Query: 344 EDPSN 330
           E  SN
Sbjct: 119 EPSSN 123



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>CYSP1_DICDI (P04988) Cysteine proteinase 1 precursor (EC 3.4.22.-)|
          Length = 343

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +3

Query: 12  SKAGNTTSKQMISTQCILTISFWQNKIGNEHAHMEYIAKLRCDXVLS*NLTPAATQHLI 188
           S  GN   +  IS   ++++S  QN +  +H  MEY  +  CD   +  L P A  ++I
Sbjct: 146 STTGNVEGQHFISQNKLVSLSE-QNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYII 203



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>BSN_RAT (O88778) Bassoon protein|
          Length = 3937

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
 Frame = -1

Query: 485  GLSSEQNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAGEEPLP-----EEDP----- 336
            G +S Q + Q   +   +QQ QQQ   Q+++Q+ + ++A  + P       +  P     
Sbjct: 3764 GTASRQPQTQQQQQQQQQQQQQQQQQQQQQQQQGLGQQAPQQAPSQARLQQQSQPTTRST 3823

Query: 335  ----SNPIFKPLPEPSRLEG 288
                S+P  KP P P+   G
Sbjct: 3824 APAASHPAGKPQPGPTTAPG 3843



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>BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain 2B (hWALp4)|
          Length = 1972

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
 Frame = -1

Query: 434  RQQSQQQAWLQKRR---QENMSRKAAGEEPLPEEDPSNPIFKPLPEPSRLEGYLVTNQIS 264
            +Q+ + +  L K R   Q  +  + A E   P ED      KPLPE  R+ G +++    
Sbjct: 835  KQEKRDEKRLNKERKLEQRRLELEMAKELKKPNEDMCLADQKPLPELPRIPGLVLSGSTF 894

Query: 263  SYC 255
            S C
Sbjct: 895  SDC 897



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>INVO_TARBA (P24711) Involucrin|
          Length = 387

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
 Frame = -1

Query: 482 LSSEQNKFQYYYRNLGRQQSQ---QQAWLQKRRQENMS---------RKAAGEEPLPEED 339
           L  +Q K Q    +LG+QQ +   Q+  L+K+ QE            ++   E+ L E +
Sbjct: 123 LGKQQQKTQEQEVHLGKQQQELQEQEVHLEKQLQEPQEVHLEKQLQEQEVHLEKQLQEPE 182

Query: 338 PSNPIFKPLPEPSRLEGYLVTNQ 270
           P   + K   EP   E YL   Q
Sbjct: 183 PELNLGKQQQEPQEQEAYLGKQQ 205



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>YKF4_YEAST (P35732) Hypothetical 84.0 kDa protein in NUP120-CSE4 intergenic|
           region
          Length = 738

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 18/78 (23%), Positives = 31/78 (39%)
 Frame = -1

Query: 473 EQNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAGEEPLPEEDPSNPIFKPLPEPSRL 294
           EQ    YY +   +Q +QQQ  LQ++      + A  ++  P+     P  +  P+  + 
Sbjct: 441 EQLSQNYYTQQQQQQYAQQQHQLQQQYLSQQQQYAQQQQQHPQPQSQQPQSQQSPQSQKQ 500

Query: 293 EGYLVTNQISSYCNHING 240
              +   Q   Y N   G
Sbjct: 501 GNNVAAQQYYMYQNQFPG 518



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>CDX1_RAT (Q05095) Homeobox protein CDX-1 (Caudal-type homeobox protein 1)|
           (Fragment)
          Length = 123

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -1

Query: 443 NLGRQQSQQQAWLQKRR--QENMSRKAAGEEPLPEEDPSNPIFKPLP 309
           NLG  + Q + W Q RR  +  +++K   ++   ++ P  P   PLP
Sbjct: 41  NLGLTERQVKIWFQNRRAKERKVNKKKQQQQQQQQQQPMPPTQLPLP 87



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>CBK1_YARLI (Q6CFS5) Serine/threonine-protein kinase CBK1 (EC 2.7.11.1)|
          Length = 588

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
 Frame = -1

Query: 470 QNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAGEEPLPEEDPSNPI-FKPLPE---- 306
           Q + Q   +   +QQ QQQ   Q+ +Q    ++   ++ + ++ PS+ + F P P+    
Sbjct: 74  QQQQQQQQQQQQQQQQQQQQQQQQHQQHQQQQQQPQQQSVAQQQPSDYVNFTPRPDLLSK 133

Query: 305 PSRLEGYLVTNQISSY 258
            +R   +  T  IS+Y
Sbjct: 134 TARDRAHNTTQVISTY 149



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>HUNB_DROOR (O62537) Protein hunchback|
          Length = 767

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
 Frame = -1

Query: 476 SEQNKFQYYYRNLGRQQSQQQAWLQ-----KRRQENMSRKAAGEEPLPEEDPSNPI---- 324
           ++QN  Q+Y  NL +Q  QQQ + Q     +++  +      G  PL      NP+    
Sbjct: 86  NDQNSLQHYDANLQQQLLQQQQYQQHFQAAQQQHHHHHHLMGGFNPLTPPGLPNPMQHFY 145

Query: 323 ---FKPLPEPSRLEGYLVTN 273
               +P P+P+ +    V +
Sbjct: 146 GGNLRPSPQPTPISASTVAS 165



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>UPPP_SYNY3 (Q55684) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl|
           pyrophosphate phosphatase) (Bacitracin resistance
           protein)
          Length = 326

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 291 LQAGWLRKRLEDRVGWIFFWQRLL 362
           L   WL K L+ R  WIF W RL+
Sbjct: 288 LAIAWLIKFLQKRSTWIFVWYRLI 311



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>LNT_PSEAE (Q9ZI86) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase) (Copper homeostasis protein cutE
           homolog)
          Length = 511

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 35/124 (28%), Positives = 52/124 (41%)
 Frame = -3

Query: 513 PRIYDWVHGWSFIRAKQVPILLSQPRKATVTATGMASKEKAREHVEKGCWRGAVARRRSI 334
           PR++   HG S +      +LL  P  A +   G A    A E +     +G +A+    
Sbjct: 186 PRLFP--HGASLLLGL---VLLLGPWAAGLYLKGHAWTHSAGEPLRVVAIQGNIAQELKW 240

Query: 333 QPYLQAAS*AIPLGGLSRNQSDLELLQPYQWGCWPEFQQAILDEGVAGRLGAGWQLA*DF 154
            P    A   +    LS  Q D++L+       WPE    IL +  +G LGA  Q+A + 
Sbjct: 241 DPNQVRAQLDL-YRDLSLPQQDVDLI------VWPETAVPILQDMASGYLGAMGQVADEK 293

Query: 153 NLTL 142
           N  L
Sbjct: 294 NAAL 297



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>CLA4_YEAST (P48562) Serine/threonine-protein kinase CLA4 (EC 2.7.11.1)|
          Length = 842

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 446 RNLGRQQSQQQAWLQKRRQENMSRKAAGEEPLPEEDPSNP 327
           R+L +QQ QQQ   Q+ +Q     +     P P   P NP
Sbjct: 369 RSLQQQQQQQQQQKQQHQQYPYHHQGPSPSPSPSPSPLNP 408



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>LGR6_HUMAN (Q9HBX8) Leucine-rich repeat-containing G-protein coupled receptor|
           6 (VTS20631)
          Length = 828

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = -1

Query: 398 RRQENMSRKAAGEEPLPEEDPSNPIFKPLPEPSRLEGYLVTNQISSYCNHINGVAGQSFN 219
           R  +N+SR  +     P +   N + +  P       +L   ++S   NH++ + GQ+F+
Sbjct: 11  RAGQNLSRAGSARRGAPRDLSMNNLTELQPGLFHHLRFLEELRLSG--NHLSHIPGQAFS 68

Query: 218 RLYLMKALQ-ED*VLGGSWREIL 153
            LY +K L  ++  LGG   E L
Sbjct: 69  GLYSLKILMLQNNQLGGIPAEAL 91



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>CAP7_ARATH (Q9LVD8) Putative clathrin assembly protein At5g57200|
          Length = 591

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = -1

Query: 476 SEQNKFQYYYRNLGRQQSQQQAWLQKRRQENMSRKAAGEEPLPEEDPSNP 327
           S Q K +Y  +    Q+ +++   +   +EN +     ++PL EE+   P
Sbjct: 314 SVQKKLEYQEKEEEEQEQEEEQPEEPAEEENQNENTENDQPLIEEEEEEP 363


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,535,851
Number of Sequences: 219361
Number of extensions: 1565651
Number of successful extensions: 5488
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5462
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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