ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd0b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 100 9e-18
2gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 100 9e-18
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
4dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 9e-18
5dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 9e-18
6dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 9e-18
7gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA... 76 1e-10
8gb|AY108197.1| Zea mays PCO065133 mRNA sequence 74 5e-10
9ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
10ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
12dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
13dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
14dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
15dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
16dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
17gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) m... 46 0.12
18gb|AC026116.26| Homo sapiens 12 BAC RP11-1022B3 (Roswell Park Ca... 44 0.47
19dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.47
20ref|XM_473942.1| Oryza sativa (japonica cultivar-group), predic... 42 1.9
21emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 42 1.9
22dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
23dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
24dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
25gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
26gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
27emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clon... 40 7.3
28emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in ... 40 7.3
29gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell... 40 7.3
30dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
31dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
32gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, r... 40 7.3
33dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
34gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 7.3
35gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62... 40 7.3
36gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 40 7.3
37gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
38gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
39emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.3 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 93/106 (87%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                            
Query: 436      cgaggcggtcgccctcggtgaagatgtgttcgcgggttgatgtcgctgagcttggtgcac 495
                ||||||||||| | |||||| |||||||  ||||||| |||||||  ||||  |||||| 
Sbjct: 32328144 cgaggcggtcggcgtcggtgtagatgtgggcgcgggt-gatgtcggcgagcgaggtgcat 32328086

                                                              
Query: 496      ccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgca 541
                |||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 32328085 ccgctgagcgccatggtgagctcgaactcctcccgcatcatccgca 32328040
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>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 93/106 (87%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                         
Query: 436   cgaggcggtcgccctcggtgaagatgtgttcgcgggttgatgtcgctgagcttggtgcac 495
             ||||||||||| | |||||| |||||||  ||||||| |||||||  ||||  |||||| 
Sbjct: 61911 cgaggcggtcggcgtcggtgtagatgtgggcgcgggt-gatgtcggcgagcgaggtgcat 61853

                                                           
Query: 496   ccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgca 541
             |||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61852 ccgctgagcgccatggtgagctcgaactcctcccgcatcatccgca 61807
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 93/106 (87%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                            
Query: 436      cgaggcggtcgccctcggtgaagatgtgttcgcgggttgatgtcgctgagcttggtgcac 495
                ||||||||||| | |||||| |||||||  ||||||| |||||||  ||||  |||||| 
Sbjct: 32418654 cgaggcggtcggcgtcggtgtagatgtgggcgcgggt-gatgtcggcgagcgaggtgcat 32418596

                                                              
Query: 496      ccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgca 541
                |||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 32418595 ccgctgagcgccatggtgagctcgaactcctcccgcatcatccgca 32418550
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>dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N09, full
            insert sequence
          Length = 1526

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 93/106 (87%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                        
Query: 436  cgaggcggtcgccctcggtgaagatgtgttcgcgggttgatgtcgctgagcttggtgcac 495
            ||||||||||| | |||||| |||||||  ||||||| |||||||  ||||  |||||| 
Sbjct: 1162 cgaggcggtcggcgtcggtgtagatgtgggcgcgggt-gatgtcggcgagcgaggtgcat 1104

                                                          
Query: 496  ccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgca 541
            |||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1103 ccgctgagcgccatggtgagctcgaactcctcccgcatcatccgca 1058
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>dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E15, full
            insert sequence
          Length = 1522

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 93/106 (87%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                        
Query: 436  cgaggcggtcgccctcggtgaagatgtgttcgcgggttgatgtcgctgagcttggtgcac 495
            ||||||||||| | |||||| |||||||  ||||||| |||||||  ||||  |||||| 
Sbjct: 1158 cgaggcggtcggcgtcggtgtagatgtgggcgcgggt-gatgtcggcgagcgaggtgcat 1100

                                                          
Query: 496  ccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgca 541
            |||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1099 ccgctgagcgccatggtgagctcgaactcctcccgcatcatccgca 1054
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>dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H12, full
            insert sequence
          Length = 1586

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 93/106 (87%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                        
Query: 436  cgaggcggtcgccctcggtgaagatgtgttcgcgggttgatgtcgctgagcttggtgcac 495
            ||||||||||| | |||||| |||||||  ||||||| |||||||  ||||  |||||| 
Sbjct: 1222 cgaggcggtcggcgtcggtgtagatgtgggcgcgggt-gatgtcggcgagcgaggtgcat 1164

                                                          
Query: 496  ccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgca 541
            |||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1163 ccgctgagcgccatggtgagctcgaactcctcccgcatcatccgca 1118
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>gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA, complete cds
          Length = 1473

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 90/106 (84%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                        
Query: 436  cgaggcggtcgccctcggtgaagatgtgttcgcgggttgatgtcgctgagcttggtgcac 495
            ||||||| ||| | || ||| |||||||  ||||||| |||||||  ||||  |||||| 
Sbjct: 1128 cgaggcgttcggcgtccgtgtagatgtgggcgcgggt-gatgtcggcgagcgaggtgcat 1070

                                                          
Query: 496  ccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgca 541
            |||| || ||||||||||||||||||||||||||||||||| ||||
Sbjct: 1069 ccgctgaacgccatggtgagctcgaactcctcccgcatcatccgca 1024
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>gb|AY108197.1| Zea mays PCO065133 mRNA sequence
          Length = 1667

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 489  ggtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgca 541
            |||||| |||| |||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 1249 ggtgcagccgctgagcgccatggtgagctcgaactcgtcccgcagcatgcgca 1197
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>ref|XM_476669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1439

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 489  ggtgcacccgccgagcgccatggtgagctcgaactc 524
            |||||| |||| ||||||||||||||||||||||||
Sbjct: 1101 ggtgcagccgctgagcgccatggtgagctcgaactc 1066
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>ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group), B1364A02.11-1 mRNA
          Length = 1501

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 489  ggtgcacccgccgagcgccatggtgagctcgaactc 524
            |||||| |||| ||||||||||||||||||||||||
Sbjct: 1142 ggtgcagccgctgagcgccatggtgagctcgaactc 1107
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                   
Query: 489     ggtgcacccgccgagcgccatggtgagctcgaactc 524
               |||||| |||| ||||||||||||||||||||||||
Sbjct: 2833136 ggtgcagccgctgagcgccatggtgagctcgaactc 2833101
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>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1364A02
          Length = 137933

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                  
Query: 489    ggtgcacccgccgagcgccatggtgagctcgaactc 524
              |||||| |||| ||||||||||||||||||||||||
Sbjct: 136697 ggtgcagccgctgagcgccatggtgagctcgaactc 136662
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>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0050B07
          Length = 142134

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 489  ggtgcacccgccgagcgccatggtgagctcgaactc 524
            |||||| |||| ||||||||||||||||||||||||
Sbjct: 3423 ggtgcagccgctgagcgccatggtgagctcgaactc 3388
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>dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A14, full
            insert sequence
          Length = 1738

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 489  ggtgcacccgccgagcgccatggtgagctcgaactc 524
            |||||| |||| ||||||||||||||||||||||||
Sbjct: 1400 ggtgcagccgctgagcgccatggtgagctcgaactc 1365
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>dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E11, full
            insert sequence
          Length = 1439

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 489  ggtgcacccgccgagcgccatggtgagctcgaactc 524
            |||||| |||| ||||||||||||||||||||||||
Sbjct: 1101 ggtgcagccgctgagcgccatggtgagctcgaactc 1066
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>dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E08, full
            insert sequence
          Length = 1501

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 489  ggtgcacccgccgagcgccatggtgagctcgaactc 524
            |||||| |||| ||||||||||||||||||||||||
Sbjct: 1142 ggtgcagccgctgagcgccatggtgagctcgaactc 1107
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>gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) mRNA, complete cds
          Length = 1486

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 505  gccatggtgagctcgaactcctc 527
            |||||||||||||||||||||||
Sbjct: 1115 gccatggtgagctcgaactcctc 1093
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>gb|AC026116.26| Homo sapiens 12 BAC RP11-1022B3 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 177267

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 48    ccagataataccagtatccaaa 69
             ||||||||||||||||||||||
Sbjct: 22904 ccagataataccagtatccaaa 22883
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 426    agcgggcgtccgaggcggtcgc 447
              ||||||||||||||||||||||
Sbjct: 277779 agcgggcgtccgaggcggtcgc 277800



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 420     ctcggcagcgggcgtccgag 439
               ||||||||||||||||||||
Sbjct: 5814716 ctcggcagcgggcgtccgag 5814697
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>ref|XM_473942.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 490  gtgcacccgccgagcgccatggtgagctc 518
            ||||| |||| ||||||||||||||||||
Sbjct: 1034 gtgcatccgctgagcgccatggtgagctc 1006
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>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
             complete sequence
          Length = 187601

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 490   gtgcacccgccgagcgccatggtgagctc 518
             ||||| |||| ||||||||||||||||||
Sbjct: 59360 gtgcatccgctgagcgccatggtgagctc 59332
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 490      gtgcacccgccgagcgccatggtgagctc 518
                ||||| |||| ||||||||||||||||||
Sbjct: 31726090 gtgcatccgctgagcgccatggtgagctc 31726062
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>dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156O03, full
            insert sequence
          Length = 1435

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 490  gtgcacccgccgagcgccatggtgagctc 518
            ||||| |||| ||||||||||||||||||
Sbjct: 1103 gtgcatccgctgagcgccatggtgagctc 1075
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>dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F07, full
            insert sequence
          Length = 1427

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 490  gtgcacccgccgagcgccatggtgagctc 518
            ||||| |||| ||||||||||||||||||
Sbjct: 1107 gtgcatccgctgagcgccatggtgagctc 1079
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>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0002A19, complete sequence
          Length = 139052

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 165   ggtgcgaaatatggtggaaatggcgaga 192
             |||||||||| |||||||||||| ||||
Sbjct: 29983 ggtgcgaaatttggtggaaatggagaga 29956
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>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06,
              complete sequence
          Length = 158842

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 165    ggtgcgaaatatggtggaaatggcgaga 192
              |||||||||| |||||||||||| ||||
Sbjct: 158442 ggtgcgaaatttggtggaaatggagaga 158415
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>emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clone B13M15
          Length = 63598

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   gtgcgttgcgttgcgttgcg 334
             ||||||||||||||||||||
Sbjct: 42541 gtgcgttgcgttgcgttgcg 42560
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>emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in linkage group 5, complete
              sequence
          Length = 186135

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    acatggaaatacaatatggt 158
              ||||||||||||||||||||
Sbjct: 166707 acatggaaatacaatatggt 166688
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>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   gtgcgttgcgttgcgttgcg 334
             ||||||||||||||||||||
Sbjct: 26559 gtgcgttgcgttgcgttgcg 26540
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 89       atgtatgataaatacagaat 108
                ||||||||||||||||||||
Sbjct: 22849581 atgtatgataaatacagaat 22849562
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 165      ggtgcgaaatatggtggaaatggcgaga 192
                |||||||||| |||||||||||| ||||
Sbjct: 17868791 ggtgcgaaatttggtggaaatggagaga 17868764
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>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone
             BACR48M01, complete sequence
          Length = 188272

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   gtgcgttgcgttgcgttgcg 334
             ||||||||||||||||||||
Sbjct: 77465 gtgcgttgcgttgcgttgcg 77484
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>dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-E12, full
           insert sequence
          Length = 2833

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 315 gtgcgttgcgttgcgttgcg 334
           ||||||||||||||||||||
Sbjct: 859 gtgcgttgcgttgcgttgcg 878
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 518     cgaactcctcccgcatcatgcgca 541
               |||| |||||||||||||||||||
Sbjct: 2682575 cgaaatcctcccgcatcatgcgca 2682552
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>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the
            complete sequence
          Length = 290640

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 315  gtgcgttgcgttgcgttgcg 334
            ||||||||||||||||||||
Sbjct: 5027 gtgcgttgcgttgcgttgcg 5008
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>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 315    gtgcgttgcgttgcgttgcg 334
              ||||||||||||||||||||
Sbjct: 111005 gtgcgttgcgttgcgttgcg 111024
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 165      ggtgcgaaatatggtggaaatggcgaga 192
                |||||||||| |||||||||||| ||||
Sbjct: 17963108 ggtgcgaaatttggtggaaatggagaga 17963081
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 89       atgtatgataaatacagaat 108
                ||||||||||||||||||||
Sbjct: 22777772 atgtatgataaatacagaat 22777753
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>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     atgtatgataaatacagaat 108
              ||||||||||||||||||||
Sbjct: 107263 atgtatgataaatacagaat 107282


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,086,662
Number of Sequences: 3902068
Number of extensions: 3086662
Number of successful extensions: 51467
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51085
Number of HSP's gapped (non-prelim): 370
length of query: 542
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 519
effective length of database: 17,143,297,704
effective search space: 8897371508376
effective search space used: 8897371508376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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