Clone Name | rbasd0b03 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|AC110574.9| Mus musculus chromosome 3, clone RP23-324B15, com... | 36 | 5.3 | 2 | gb|AC011363.6| Homo sapiens chromosome 5 clone CTC-529G1, comple... | 36 | 5.3 | 3 | gb|AC119881.10| Mus musculus chromosome 3, clone RP24-428N8, com... | 36 | 5.3 |
---|
>gb|AC110574.9| Mus musculus chromosome 3, clone RP23-324B15, complete sequence Length = 196451 Score = 36.2 bits (18), Expect = 5.3 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gggaactactgggttgtt 18 |||||||||||||||||| Sbjct: 22416 gggaactactgggttgtt 22433
>gb|AC011363.6| Homo sapiens chromosome 5 clone CTC-529G1, complete sequence Length = 102425 Score = 36.2 bits (18), Expect = 5.3 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 ggaactactgggttgttg 19 |||||||||||||||||| Sbjct: 82135 ggaactactgggttgttg 82118
>gb|AC119881.10| Mus musculus chromosome 3, clone RP24-428N8, complete sequence Length = 167095 Score = 36.2 bits (18), Expect = 5.3 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gggaactactgggttgtt 18 |||||||||||||||||| Sbjct: 40972 gggaactactgggttgtt 40955 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 126,163 Number of Sequences: 3902068 Number of extensions: 126163 Number of successful extensions: 29625 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 29622 Number of HSP's gapped (non-prelim): 3 length of query: 44 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 24 effective length of database: 17,155,003,908 effective search space: 411720093792 effective search space used: 411720093792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)