ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd0b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450798.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2391 Score = 293 bits (148), Expect = 4e-76 Identities = 367/440 (83%) Strand = Plus / Minus Query: 217 tcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcct 276 |||||| | ||||||||||||||| || ||||| || | |||||||| || |||||||| Sbjct: 2117 tcagacagcagggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcct 2058 Query: 277 ggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcac 336 ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 2057 cgcgtctttcttgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcac 1998 Query: 337 cgcgctctggtgcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaa 396 || | | | |||| | ||||||||||| |||||||||||||| || ||||| || || Sbjct: 1997 cgtgttattgtgcgtctcgatcgtgttgtcgaggaagtaggccacaagacccgcgacaaa 1938 Query: 397 cggcttgttcgagaagggcacgttgatcatgtcgttgaaccatctagcgcccgtgtgcac 456 |||||| |||||| |||||||| ||||| || ||||||||||| || || |||||||| Sbjct: 1937 cggcttcgacgagaacggcacgtttatcatatcattgaaccatctggcaccagtgtgcac 1878 Query: 457 cgggccatggcccgagacggaggcgtactcgttgaagtactgaggaaccgatatgccgat 516 || |||| || | || | | |||||| ||||||||||||||||| || || || || Sbjct: 1877 tggtccataacctgcaacagctgtgtactcattgaagtactgaggaactgagatccccat 1818 Query: 517 gaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactgaag 576 |||||| | || |||| |||||| ||||||||||||||||| | |||||| |||||||| Sbjct: 1817 gaagaaagcaaaacccaagatgaatttggtcctgaagctgtttaggttgcaaaactgaag 1758 Query: 577 gaagctcagaccacacgcaccaacatatgcgaagaaaacacagtacatgccagcaaatat 636 ||| |||| |||||| ||||| ||||| |||||||||| |||||||||||| |||||||| Sbjct: 1757 gaaactcaaaccacaggcaccgacataagcgaagaaaatacagtacatgcccgcaaatat 1698 Query: 637 aggcaatggaatggacgcga 656 ||||||||||||||| |||| Sbjct: 1697 aggcaatggaatggatgcga 1678
>ref|XM_506662.1| PREDICTED Oryza sativa (japonica cultivar-group), P0027G10.52 mRNA Length = 2682 Score = 293 bits (148), Expect = 4e-76 Identities = 367/440 (83%) Strand = Plus / Minus Query: 217 tcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcct 276 |||||| | ||||||||||||||| || ||||| || | |||||||| || |||||||| Sbjct: 2394 tcagacagcagggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcct 2335 Query: 277 ggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcac 336 ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 2334 cgcgtctttcttgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcac 2275 Query: 337 cgcgctctggtgcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaa 396 || | | | |||| | ||||||||||| |||||||||||||| || ||||| || || Sbjct: 2274 cgtgttattgtgcgtctcgatcgtgttgtcgaggaagtaggccacaagacccgcgacaaa 2215 Query: 397 cggcttgttcgagaagggcacgttgatcatgtcgttgaaccatctagcgcccgtgtgcac 456 |||||| |||||| |||||||| ||||| || ||||||||||| || || |||||||| Sbjct: 2214 cggcttcgacgagaacggcacgtttatcatatcattgaaccatctggcaccagtgtgcac 2155 Query: 457 cgggccatggcccgagacggaggcgtactcgttgaagtactgaggaaccgatatgccgat 516 || |||| || | || | | |||||| ||||||||||||||||| || || || || Sbjct: 2154 tggtccataacctgcaacagctgtgtactcattgaagtactgaggaactgagatccccat 2095 Query: 517 gaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactgaag 576 |||||| | || |||| |||||| ||||||||||||||||| | |||||| |||||||| Sbjct: 2094 gaagaaagcaaaacccaagatgaatttggtcctgaagctgtttaggttgcaaaactgaag 2035 Query: 577 gaagctcagaccacacgcaccaacatatgcgaagaaaacacagtacatgccagcaaatat 636 ||| |||| |||||| ||||| ||||| |||||||||| |||||||||||| |||||||| Sbjct: 2034 gaaactcaaaccacaggcaccgacataagcgaagaaaatacagtacatgcccgcaaatat 1975 Query: 637 aggcaatggaatggacgcga 656 ||||||||||||||| |||| Sbjct: 1974 aggcaatggaatggatgcga 1955
>dbj|AK064905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L20, full insert sequence Length = 2391 Score = 293 bits (148), Expect = 4e-76 Identities = 367/440 (83%) Strand = Plus / Minus Query: 217 tcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcct 276 |||||| | ||||||||||||||| || ||||| || | |||||||| || |||||||| Sbjct: 2117 tcagacagcagggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcct 2058 Query: 277 ggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcac 336 ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 2057 cgcgtctttcttgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcac 1998 Query: 337 cgcgctctggtgcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaa 396 || | | | |||| | ||||||||||| |||||||||||||| || ||||| || || Sbjct: 1997 cgtgttattgtgcgtctcgatcgtgttgtcgaggaagtaggccacaagacccgcgacaaa 1938 Query: 397 cggcttgttcgagaagggcacgttgatcatgtcgttgaaccatctagcgcccgtgtgcac 456 |||||| |||||| |||||||| ||||| || ||||||||||| || || |||||||| Sbjct: 1937 cggcttcgacgagaacggcacgtttatcatatcattgaaccatctggcaccagtgtgcac 1878 Query: 457 cgggccatggcccgagacggaggcgtactcgttgaagtactgaggaaccgatatgccgat 516 || |||| || | || | | |||||| ||||||||||||||||| || || || || Sbjct: 1877 tggtccataacctgcaacagccgtgtactcattgaagtactgaggaactgagatccccat 1818 Query: 517 gaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactgaag 576 |||||| | || |||| |||||| ||||||||||||||||| | |||||| |||||||| Sbjct: 1817 gaagaaagcaaaacccaagatgaatttggtcctgaagctgtttaggttgcaaaactgaag 1758 Query: 577 gaagctcagaccacacgcaccaacatatgcgaagaaaacacagtacatgccagcaaatat 636 ||| |||| |||||| ||||| ||||| |||||||||| |||||||||||| |||||||| Sbjct: 1757 gaaactcaaaccacatgcaccgacataagcgaagaaaatacagtacatgcccgcaaatat 1698 Query: 637 aggcaatggaatggacgcga 656 ||||||||||||||| |||| Sbjct: 1697 aggcaatggaatggatgcga 1678
>dbj|AK061792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F05, full insert sequence Length = 993 Score = 293 bits (148), Expect = 4e-76 Identities = 367/440 (83%) Strand = Plus / Minus Query: 217 tcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcct 276 |||||| | ||||||||||||||| || ||||| || | |||||||| || |||||||| Sbjct: 783 tcagacagcagggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcct 724 Query: 277 ggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcac 336 ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 723 cgcgtctttcttgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcac 664 Query: 337 cgcgctctggtgcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaa 396 || | | | |||| | ||||||||||| |||||||||||||| || ||||| || || Sbjct: 663 cgtgttattgtgcgtctcgatcgtgttgtcgaggaagtaggccacaagacccgcgacaaa 604 Query: 397 cggcttgttcgagaagggcacgttgatcatgtcgttgaaccatctagcgcccgtgtgcac 456 |||||| |||||| |||||||| ||||| || ||||||||||| || || |||||||| Sbjct: 603 cggcttcgacgagaacggcacgtttatcatatcattgaaccatctggcaccagtgtgcac 544 Query: 457 cgggccatggcccgagacggaggcgtactcgttgaagtactgaggaaccgatatgccgat 516 || |||| || | || | | |||||| ||||||||||||||||| || || || || Sbjct: 543 tggtccataacctgcaacagctgtgtactcattgaagtactgaggaactgagatccccat 484 Query: 517 gaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactgaag 576 |||||| | || |||| |||||| ||||||||||||||||| | |||||| |||||||| Sbjct: 483 gaagaaagcaaaacccaagatgaatttggtcctgaagctgtttaggttgcaaaactgaag 424 Query: 577 gaagctcagaccacacgcaccaacatatgcgaagaaaacacagtacatgccagcaaatat 636 ||| |||| |||||| ||||| ||||| |||||||||| |||||||||||| |||||||| Sbjct: 423 gaaactcaaaccacaggcaccgacataagcgaagaaaatacagtacatgcccgcaaatat 364 Query: 637 aggcaatggaatggacgcga 656 ||||||||||||||| |||| Sbjct: 363 aggcaatggaatggatgcga 344
>dbj|AK121778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093F12, full insert sequence Length = 2682 Score = 285 bits (144), Expect = 9e-74 Identities = 366/440 (83%) Strand = Plus / Minus Query: 217 tcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcct 276 |||||| | ||||||||||||||| || ||||| || | |||||||| || |||||||| Sbjct: 2394 tcagacagcagggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcct 2335 Query: 277 ggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcac 336 ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 2334 cgcgtctttcttgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcac 2275 Query: 337 cgcgctctggtgcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaa 396 || ||| | |||| | ||||||| ||| |||||||||||||| || ||||| || || Sbjct: 2274 cgtgctattgtgcgtctcgatcgtgtcgtcgaggaagtaggccacaagacccgcgacaaa 2215 Query: 397 cggcttgttcgagaagggcacgttgatcatgtcgttgaaccatctagcgcccgtgtgcac 456 ||| || |||||| |||||||| ||||| || ||||||||||| || || |||||||| Sbjct: 2214 cggttttgacgagaacggcacgtttatcatatcattgaaccatctggcaccagtgtgcac 2155 Query: 457 cgggccatggcccgagacggaggcgtactcgttgaagtactgaggaaccgatatgccgat 516 || |||| || | || | | |||||| ||||||||||||||||| || || || || Sbjct: 2154 tggtccataacctgcaacagctgtgtactcattgaagtactgaggaactgagatccccat 2095 Query: 517 gaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactgaag 576 |||||| | || |||| |||||| ||||||||||||||||| | |||||| |||||||| Sbjct: 2094 gaagaaagcaaaacccaagatgaatttggtcctgaagctgtttaggttgcaaaactgaag 2035 Query: 577 gaagctcagaccacacgcaccaacatatgcgaagaaaacacagtacatgccagcaaatat 636 ||| |||| |||||| ||||| ||||| |||||||||| |||||||||||| |||||||| Sbjct: 2034 gaaactcaaaccacaggcaccgacataagcgaagaaaatacagtacatgcccgcaaatat 1975 Query: 637 aggcaatggaatggacgcga 656 ||||||||||||||| |||| Sbjct: 1974 aggcaatggaatggatgcga 1955
>ref|XM_482444.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2104 Score = 281 bits (142), Expect = 1e-72 Identities = 334/398 (83%) Strand = Plus / Minus Query: 215 gatcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgctc 274 ||||| || ||||||||||||||||| | |||||| ||||| |||||||||||||||||| Sbjct: 1778 gatcacacggaagggaagaacttgttcaagttgaacggcagagagtagaactcctcgctc 1719 Query: 275 ctggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctc 334 | || |||| |||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 1718 cgggtgtccgtcttgaagctcctgaacttgtcccaccagtggtatcccctgtctctcctc 1659 Query: 335 accgcgctctggtgcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacg 394 ||| | | | | || || || |||||||| |||||||| || | ||||| || ||| Sbjct: 1658 accccattgtcgcgcctctggatagtgttgtctaggaagtacgcaatgagccctgcgacg 1599 Query: 395 aacggcttgttcgagaagggcacgttgatcatgtcgttgaaccatctagcgcccgtgtgc 454 |||||||| || |||||| || || |||||||| |||||||||| |||||| |||||| Sbjct: 1598 aacggctttgacgcgaagggtacatttatcatgtcattgaaccatcgagcgccggtgtgc 1539 Query: 455 accgggccatggcccgagacggaggcgtactcgttgaagtactgaggaaccgatatgccg 514 || || |||| || | || || | |||||||||||||||||||||||||||| ||| Sbjct: 1538 actggaccataaccggcaaccgatgtatactcgttgaagtactgaggaaccgataagccc 1479 Query: 515 atgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactga 574 |||||||| ||||| |||| ||||||||||||||||||||||| | |||||||||||| Sbjct: 1478 atgaagaacgagaaccccacaatgaacttggtcctgaagctgttgagattgcagaactga 1419 Query: 575 aggaagctcagaccacacgcaccaacatatgcgaagaa 612 ||||||||||||||||| ||||||| |||||| ||||| Sbjct: 1418 aggaagctcagaccacaggcaccaatatatgcaaagaa 1381
>dbj|AK073563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041K18, full insert sequence Length = 2104 Score = 274 bits (138), Expect = 3e-70 Identities = 333/398 (83%) Strand = Plus / Minus Query: 215 gatcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgctc 274 ||||| || ||||||||||||||||| | |||||| ||||| |||||||||||||||||| Sbjct: 1778 gatcacacggaagggaagaacttgttcaagttgaacggcagagagtagaactcctcgctc 1719 Query: 275 ctggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctc 334 | || |||| |||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 1718 cgggtgtccgtcttgaagctcctgaacttgtcccaccagtggtatcccctgtctctcctc 1659 Query: 335 accgcgctctggtgcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacg 394 ||| | | | | || || || |||||||| |||||||| || | ||||| || ||| Sbjct: 1658 accccattgtcgcgcctctggatagtgttgtctaggaagtacgcaatgagccctgcgacg 1599 Query: 395 aacggcttgttcgagaagggcacgttgatcatgtcgttgaaccatctagcgcccgtgtgc 454 |||||||| || ||| || || || |||||||| |||||||||| |||||| |||||| Sbjct: 1598 aacggctttgacgcgaatggtacatttatcatgtcattgaaccatcgagcgccggtgtgc 1539 Query: 455 accgggccatggcccgagacggaggcgtactcgttgaagtactgaggaaccgatatgccg 514 || || |||| || | || || | |||||||||||||||||||||||||||| ||| Sbjct: 1538 actggaccataaccggcaaccgatgtatactcgttgaagtactgaggaaccgataagccc 1479 Query: 515 atgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactga 574 |||||||| ||||| |||| ||||||||||||||||||||||| | |||||||||||| Sbjct: 1478 atgaagaacgagaaccccacaatgaacttggtcctgaagctgttgagattgcagaactga 1419 Query: 575 aggaagctcagaccacacgcaccaacatatgcgaagaa 612 ||||||||||||||||| ||||||| |||||| ||||| Sbjct: 1418 aggaagctcagaccacaggcaccaatatatgcaaagaa 1381
>gb|AY108075.1| Zea mays PCO139016 mRNA sequence Length = 1136 Score = 266 bits (134), Expect = 8e-68 Identities = 300/353 (84%), Gaps = 2/353 (0%) Strand = Plus / Minus Query: 284 ttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcaccgcgctc 343 ||| |||||||||||||||| ||||||||||||| || ||||||||||||||||||||| Sbjct: 1132 ttcntgaagctcctgaacttctcccaccagtggttgcccctgtccttcctcaccgcgctc 1073 Query: 344 tggtgcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaacggcttg 403 | | | || | ||||||||||||| ||||| |||| ||| || ||||||||||| Sbjct: 1072 tcctttacctggagggtgttgtccaggatataggctaccaacccagcgacgaacggcttc 1013 Query: 404 ttcgagaagggcacgttgatcatgtcgttgaaccatctagcgcccgtgtgcaccgggcca 463 || ||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1012 gacgtgaatggcacgttgatcatgtcattgaaccatctggcgccagtgtgcaccggacca 953 Query: 464 tggcccgagacggaggcgtactcgttgaagtactgaggaaccgatatgccgatgaagaag 523 | || | |||| | ||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 952 tagcttgcaacggctgtgtactcgttgaagtactgaggaaccgataggcccatgaagaaa 893 Query: 524 gagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactgaaggaagctc 583 | ||| |||| ||||||||||||||| |||||||| | ||||||||||||||||| |||| Sbjct: 892 gcgaaccccatgatgaacttggtcctaaagctgtttaggttgcagaactgaaggaggctc 833 Query: 584 agaccacacg-caccaacatatgcgaagaaaacacagtacatgccagcaaata 635 || ||| ||| ||||||||||||||||||| | |||||||||||| ||||||| Sbjct: 832 aggcca-acgccaccaacatatgcgaagaagagacagtacatgccggcaaata 781
>gb|AY111994.1| Zea mays CL3266_1 mRNA sequence Length = 672 Score = 240 bits (121), Expect = 5e-60 Identities = 289/343 (84%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 215 gatcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgctc 274 |||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct: 322 gatcagacggaagggnnnnncttgttgaggttgaagggcagcgagtagaactcctcgctg 381 Query: 275 ctggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctc 334 | | |||| |||||||||||| ||||||||||||||||||||| || |||||| ||||| Sbjct: 382 cggctgtccgtcttgaagctccggaacttgtcccaccagtggtagcccctgtccctcctc 441 Query: 335 accgcgctctggtgcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacg 394 || |||| | ||| || |||||||||||||| ||| ||||||||||| | |||||| Sbjct: 442 acgccgctgtcacgcacctggatcgtgttgtccagtaagaaggccaccagcacagccacg 501 Query: 395 aacggcttgttcgagaagggcacgttgatcatgtcgttgaaccatctagcgcccgtgtgc 454 |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 502 aacggcttcgacgagaagggcacgttgatcatgtcgttgaaccatcgggcgccggtgtgc 561 Query: 455 accgggccatggcccgagacggaggcgtactcgttgaagtactgaggaaccgatatgccg 514 || ||||||| ||| | ||||| | ||||||||||||| | || || || || | ||| Sbjct: 562 acggggccatagccagccacggacgtgtactcgttgaag-attggggnactgacaggccc 620 Query: 515 atgaagaaggagaagcccaggatgaacttggtcctgaagctgt 557 ||||| |||||||| |||| ||||||||| ||||||||||||| Sbjct: 621 atgaacaaggagaa-cccatgatgaactt-gtcctgaagctgt 661
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 151 bits (76), Expect = 3e-33 Identities = 106/116 (91%) Strand = Plus / Minus Query: 482 tactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaac 541 |||||||||||||||||||||||||||| ||| |||||||| ||||| |||| |||||| Sbjct: 20125731 tactcgttgaagtactgaggaaccgataagcccatgaagaacgagaaccccacaatgaac 20125672 Query: 542 ttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgcacc 597 ||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 20125671 ttggtcctgaagctgttgagattgcagaactgaaggaagctcagaccacaggcacc 20125616 Score = 141 bits (71), Expect = 3e-30 Identities = 110/123 (89%) Strand = Plus / Minus Query: 215 gatcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgctc 274 ||||| || ||||||||||||||||| | |||||| ||||| |||||||||||||||||| Sbjct: 20126100 gatcacacggaagggaagaacttgttcaagttgaacggcagagagtagaactcctcgctc 20126041 Query: 275 ctggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctc 334 | || |||| |||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 20126040 cgggtgtccgtcttgaagctcctgaacttgtcccaccagtggtatcccctgtctctcctc 20125981 Query: 335 acc 337 ||| Sbjct: 20125980 acc 20125978 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 226 agggaagaacttgttgaggttgaagggcagggagtagaactcctc 270 |||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 17188298 agggaagaaccggttgaggttgaagggcagggtgtagaactcctc 17188254
>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1188_F05 Length = 117045 Score = 151 bits (76), Expect = 3e-33 Identities = 106/116 (91%) Strand = Plus / Minus Query: 482 tactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaac 541 |||||||||||||||||||||||||||| ||| |||||||| ||||| |||| |||||| Sbjct: 72277 tactcgttgaagtactgaggaaccgataagcccatgaagaacgagaaccccacaatgaac 72218 Query: 542 ttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgcacc 597 ||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 72217 ttggtcctgaagctgttgagattgcagaactgaaggaagctcagaccacaggcacc 72162 Score = 141 bits (71), Expect = 3e-30 Identities = 110/123 (89%) Strand = Plus / Minus Query: 215 gatcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgctc 274 ||||| || ||||||||||||||||| | |||||| ||||| |||||||||||||||||| Sbjct: 72646 gatcacacggaagggaagaacttgttcaagttgaacggcagagagtagaactcctcgctc 72587 Query: 275 ctggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctc 334 | || |||| |||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 72586 cgggtgtccgtcttgaagctcctgaacttgtcccaccagtggtatcccctgtctctcctc 72527 Query: 335 acc 337 ||| Sbjct: 72526 acc 72524
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 143 bits (72), Expect = 8e-31 Identities = 183/220 (83%) Strand = Plus / Minus Query: 217 tcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcct 276 |||||| | ||||||||||||||| || ||||| || | |||||||| || |||||||| Sbjct: 12834485 tcagacagcagggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcct 12834426 Query: 277 ggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcac 336 ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 12834425 cgcgtctttcttgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcac 12834366 Query: 337 cgcgctctggtgcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaa 396 || | | | |||| | ||||||||||| |||||||||||||| || ||||| || || Sbjct: 12834365 cgtgttattgtgcgtctcgatcgtgttgtcgaggaagtaggccacaagacccgcgacaaa 12834306 Query: 397 cggcttgttcgagaagggcacgttgatcatgtcgttgaac 436 |||||| |||||| |||||||| ||||| || |||||| Sbjct: 12834305 cggcttcgacgagaacggcacgtttatcatatcattgaac 12834266 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 481 gtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaa 540 |||||| ||||||||||||||||| || || || |||||||| | || |||| |||||| Sbjct: 12834115 gtactcattgaagtactgaggaactgagatccccatgaagaaagcaaaacccaagatgaa 12834056 Query: 541 cttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgcacc 597 ||||||||||||||||| | |||||| ||||||||||| |||| |||||| ||||| Sbjct: 12834055 tttggtcctgaagctgtttaggttgcaaaactgaaggaaactcaaaccacaggcacc 12833999 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 599 acatatgcgaagaaaacacagtacatgccagcaaatataggcaatggaatggacgcga 656 ||||| |||||||||| |||||||||||| ||||||||||||||||||||||| |||| Sbjct: 12833896 acataagcgaagaaaatacagtacatgcccgcaaatataggcaatggaatggatgcga 12833839 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactc 267 ||||||||| | ||||||||||| ||||||| ||||||||| Sbjct: 9158537 gggaagaacctattgaggttgaatggcagggtgtagaactc 9158497
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 143 bits (72), Expect = 8e-31 Identities = 183/220 (83%) Strand = Plus / Minus Query: 217 tcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcct 276 |||||| | ||||||||||||||| || ||||| || | |||||||| || |||||||| Sbjct: 142262 tcagacagcagggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcct 142203 Query: 277 ggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcac 336 ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 142202 cgcgtctttcttgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcac 142143 Query: 337 cgcgctctggtgcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaa 396 || | | | |||| | ||||||||||| |||||||||||||| || ||||| || || Sbjct: 142142 cgtgttattgtgcgtctcgatcgtgttgtcgaggaagtaggccacaagacccgcgacaaa 142083 Query: 397 cggcttgttcgagaagggcacgttgatcatgtcgttgaac 436 |||||| |||||| |||||||| ||||| || |||||| Sbjct: 142082 cggcttcgacgagaacggcacgtttatcatatcattgaac 142043 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 481 gtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaa 540 |||||| ||||||||||||||||| || || || |||||||| | || |||| |||||| Sbjct: 141892 gtactcattgaagtactgaggaactgagatccccatgaagaaagcaaaacccaagatgaa 141833 Query: 541 cttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgcacc 597 ||||||||||||||||| | |||||| ||||||||||| |||| |||||| ||||| Sbjct: 141832 tttggtcctgaagctgtttaggttgcaaaactgaaggaaactcaaaccacaggcacc 141776 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 599 acatatgcgaagaaaacacagtacatgccagcaaatataggcaatggaatggacgcga 656 ||||| |||||||||| |||||||||||| ||||||||||||||||||||||| |||| Sbjct: 141673 acataagcgaagaaaatacagtacatgcccgcaaatataggcaatggaatggatgcga 141616
>ref|NM_180920.2| Arabidopsis thaliana permease AT5G62890 transcript variant AT5G62890.1 mRNA, complete cds Length = 2084 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 535 gatgaacttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgc 594 |||||||||||||||||||||||| ||||||||||| |||||||| |||| ||| | || Sbjct: 1464 gatgaacttggtcctgaagctgtttaagttgcagaattgaaggaaactcaaacctccagc 1405 Query: 595 accaacatatgcgaagaaaacacagta 621 || || ||||||||||| | |||||| Sbjct: 1404 tcccacgtatgcgaagaagagacagta 1378
>ref|NM_125683.2| Arabidopsis thaliana permease AT5G62890 transcript variant AT5G62890.2 mRNA, complete cds Length = 2044 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 535 gatgaacttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgc 594 |||||||||||||||||||||||| ||||||||||| |||||||| |||| ||| | || Sbjct: 1424 gatgaacttggtcctgaagctgtttaagttgcagaattgaaggaaactcaaacctccagc 1365 Query: 595 accaacatatgcgaagaaaacacagta 621 || || ||||||||||| | |||||| Sbjct: 1364 tcccacgtatgcgaagaagagacagta 1338
>ref|NM_001037050.1| Arabidopsis thaliana permease AT5G62890 transcript variant AT5G62890.3 mRNA, complete cds Length = 1841 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 535 gatgaacttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgc 594 |||||||||||||||||||||||| ||||||||||| |||||||| |||| ||| | || Sbjct: 1597 gatgaacttggtcctgaagctgtttaagttgcagaattgaaggaaactcaaacctccagc 1538 Query: 595 accaacatatgcgaagaaaacacagta 621 || || ||||||||||| | |||||| Sbjct: 1537 tcccacgtatgcgaagaagagacagta 1511
>ref|NM_185153.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1590 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1580 gggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 1534 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 419 ttgatcatgtcgttgaaccatctagcgcccgtgtgcaccgggccatggcccgagacggag 478 |||||||| || ||||||||||| ||| ||||| || ||||||| ||| | || ||| Sbjct: 1388 ttgatcatatcattgaaccatcttgcgtgagtgtgtactgggccatagcctgcaacagag 1329 Query: 479 gcgtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatg 538 | |||||||||||| ||||| |||||||| | || || || | |||||| |||| |||| Sbjct: 1328 gtgtactcgttgaaatactgtggaaccgacaaacccataaacacggagaatcccacgatg 1269 Query: 539 aacttggtcctgaagctgttcaagttgcagaactgaaggaa 579 || || || | ||||||||||| |||||| ||||||||||| Sbjct: 1268 aattttgttcggaagctgttcaggttgcaaaactgaaggaa 1228
>ref|XM_467723.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2124 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 481 gtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaa 540 |||||||||||||||||||||||| || | ||| || || | ||||| || |||||||| Sbjct: 1621 gtactcgttgaagtactgaggaacagaaaggcccataaaaactgagaacccgaggatgaa 1562 Query: 541 cttggtcctgaagctgttcaagttgcagaactgaaggaa 579 |||||||||||| || || | ||||||||||||||||| Sbjct: 1561 cttggtcctgaaactattgagattgcagaactgaaggaa 1523 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 1875 gggaagaacttgttcaggttgaacggcagggaatagaactcctcgct 1829
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 34293823 gggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 34293869 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 476 gaggcgtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccagg 535 |||| |||||||||||| ||||| |||||||| | || || || | |||||| |||| | Sbjct: 34294163 gaggtgtactcgttgaaatactgtggaaccgacaaacccataaacacggagaatcccacg 34294222 Query: 536 atgaacttggtcctgaagctgttcaagttgcagaactgaaggaa 579 ||||| || || | ||||||||||| |||||| ||||||||||| Sbjct: 34294223 atgaattttgttcggaagctgttcaggttgcaaaactgaaggaa 34294266 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 251 ggcagggagtagaactcctcgctcct 276 ||||| |||||||||||||||||||| Sbjct: 27524104 ggcagagagtagaactcctcgctcct 27524079
>gb|AY035003.1| Arabidopsis thaliana putative permease 1 (At5g62890) mRNA, partial cds Length = 1389 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 535 gatgaacttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgc 594 |||||||||||||||||||||||| ||||||||||| |||||||| |||| ||| | || Sbjct: 765 gatgaacttggtcctgaagctgtttaagttgcagaattgaaggaaactcaaacctccagc 706 Query: 595 accaacatatgcgaagaaaacacagta 621 || || ||||||||||| | |||||| Sbjct: 705 tcccacgtatgcgaagaagagacagta 679
>gb|AF466824.1| Arabidopsis thaliana clone GBGe55 putative permease 1 mRNA, partial cds Length = 965 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 535 gatgaacttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgc 594 |||||||||||||||||||||||| ||||||||||| |||||||| |||| ||| | || Sbjct: 334 gatgaacttggtcctgaagctgtttaagttgcagaattgaaggaaactcaaacctccagc 275 Query: 595 accaacatatgcgaagaaaacacagta 621 || || ||||||||||| | |||||| Sbjct: 274 tcccacgtatgcgaagaagagacagta 248
>gb|AF466198.1| Arabidopsis thaliana putative permease 1 (MQB2.21) mRNA, complete cds Length = 2059 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 535 gatgaacttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgc 594 |||||||||||||||||||||||| ||||||||||| |||||||| |||| ||| | || Sbjct: 1431 gatgaacttggtcctgaagctgtttaagttgcagaattgaaggaaactcaaacctccagc 1372 Query: 595 accaacatatgcgaagaaaacacagta 621 || || ||||||||||| | |||||| Sbjct: 1371 tcccacgtatgcgaagaagagacagta 1345
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 34384295 gggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 34384341 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 476 gaggcgtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccagg 535 |||| |||||||||||| ||||| |||||||| | || || || | |||||| |||| | Sbjct: 34384635 gaggtgtactcgttgaaatactgtggaaccgacaaacccataaacacggagaatcccacg 34384694 Query: 536 atgaacttggtcctgaagctgttcaagttgcagaactgaaggaa 579 ||||| || || | ||||||||||| |||||| ||||||||||| Sbjct: 34384695 atgaattttgttcggaagctgttcaggttgcaaaactgaaggaa 34384738 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 251 ggcagggagtagaactcctcgctcct 276 ||||| |||||||||||||||||||| Sbjct: 27615427 ggcagagagtagaactcctcgctcct 27615402
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 481 gtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaa 540 |||||||||||||||||||||||| || | ||| || || | ||||| || |||||||| Sbjct: 31065351 gtactcgttgaagtactgaggaacagaaaggcccataaaaactgagaacccgaggatgaa 31065410 Query: 541 cttggtcctgaagctgttcaagttgcagaactgaaggaa 579 |||||||||||| || || | ||||||||||||||||| Sbjct: 31065411 cttggtcctgaaactattgagattgcagaactgaaggaa 31065449 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 31065006 gggaagaacttgttcaggttgaacggcagggaatagaactcctcgct 31065052
>emb|BX830950.1|CNS09YMG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1872 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 535 gatgaacttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgc 594 |||||||||||||||||||||||| ||||||||||| |||||||| |||| ||| | || Sbjct: 1307 gatgaacttggtcctgaagctgtttaagttgcagaattgaaggaaactcaaacctccagc 1248 Query: 595 accaacatatgcgaagaaaacacagta 621 || || ||||||||||| | |||||| Sbjct: 1247 tcccacgtatgcgaagaagagacagta 1221
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 41175 gggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 41129 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 476 gaggcgtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccagg 535 |||| |||||||||||| ||||| |||||||| | || || || | |||||| |||| | Sbjct: 40835 gaggtgtactcgttgaaatactgtggaaccgacaaacccataaacacggagaatcccacg 40776 Query: 536 atgaacttggtcctgaagctgttcaagttgcagaactgaaggaa 579 ||||| || || | ||||||||||| |||||| ||||||||||| Sbjct: 40775 atgaattttgttcggaagctgttcaggttgcaaaactgaaggaa 40732
>gb|AF463847.1| Oryza sativa (japonica cultivar-group) transgenic plant p0719 integrated T-DNA(Ds), flanking sequence Length = 693 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 376 gggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 422
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 481 gtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaa 540 |||||||||||||||||||||||| || | ||| || || | ||||| || |||||||| Sbjct: 120307 gtactcgttgaagtactgaggaacagaaaggcccataaaaactgagaacccgaggatgaa 120366 Query: 541 cttggtcctgaagctgttcaagttgcagaactgaaggaa 579 |||||||||||| || || | ||||||||||||||||| Sbjct: 120367 cttggtcctgaaactattgagattgcagaactgaaggaa 120405 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 119962 gggaagaacttgttcaggttgaacggcagggaatagaactcctcgct 120008
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 481 gtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaa 540 |||||||||||||||||||||||| || | ||| || || | ||||| || |||||||| Sbjct: 54575 gtactcgttgaagtactgaggaacagaaaggcccataaaaactgagaacccgaggatgaa 54634 Query: 541 cttggtcctgaagctgttcaagttgcagaactgaaggaa 579 |||||||||||| || || | ||||||||||||||||| Sbjct: 54635 cttggtcctgaaactattgagattgcagaactgaaggaa 54673 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 54230 gggaagaacttgttcaggttgaacggcagggaatagaactcctcgct 54276
>dbj|AB009053.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQB2 Length = 78145 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 535 gatgaacttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgc 594 |||||||||||||||||||||||| ||||||||||| |||||||| |||| ||| | || Sbjct: 61234 gatgaacttggtcctgaagctgtttaagttgcagaattgaaggaaactcaaacctccagc 61175 Query: 595 accaacatatgcgaagaaaacacagta 621 || || ||||||||||| | |||||| Sbjct: 61174 tcccacgtatgcgaagaagagacagta 61148
>dbj|AK073562.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042I18, full insert sequence Length = 2125 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 481 gtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaa 540 |||||||||||||||||||||||| || | ||| || || | ||||| || |||||||| Sbjct: 1621 gtactcgttgaagtactgaggaacagaaaggcccataaaaactgagaacccgaggatgaa 1562 Query: 541 cttggtcctgaagctgttcaagttgcagaactgaaggaa 579 |||||||||||| || || | ||||||||||||||||| Sbjct: 1561 cttggtcctgaaactattgagattgcagaactgaaggaa 1523 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 1875 gggaagaacttgttcaggttgaacggcagggaatagaactcctcgct 1829
>dbj|AK071234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086K11, full insert sequence Length = 2014 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1772 gggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 1726 Score = 60.0 bits (30), Expect = 1e-05 Identities = 130/162 (80%), Gaps = 1/162 (0%) Strand = Plus / Minus Query: 419 ttgatcatgtcgttgaaccatctagcgcccgtgtgcaccgggccatggcccgagacggag 478 |||||||| || ||||||||||| ||| ||||| || ||||||| ||| | || ||| Sbjct: 1580 ttgatcatatcattgaaccatcttgcgtgagtgtgtactgggccatagcctgcaacagag 1521 Query: 479 gcgtactcgttgaagtactgaggaaccga-tatgccgatgaagaaggagaagcccaggat 537 | |||||||||||| ||||| |||||||| | || || || | |||||| |||| ||| Sbjct: 1520 gtgtactcgttgaaatactgtggaaccgacaaaacccataaacacggagaatcccacgat 1461 Query: 538 gaacttggtcctgaagctgttcaagttgcagaactgaaggaa 579 ||| || || | ||||||||||| |||||| ||||||||||| Sbjct: 1460 gaattttgttcggaagctgttcaggttgcaaaactgaaggaa 1419
>dbj|AK058223.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-G04, full insert sequence Length = 996 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 742 gggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 696 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 419 ttgatcatgtcgttgaaccatctagcgcccgtgtgcaccgggccatggcccgagacggag 478 |||||||| || ||||||||||| ||| ||||| || ||||||| ||| | || ||| Sbjct: 550 ttgatcatatcattgaaccatcttgcgtgagtgtgtactgggccatagcctgcaacagag 491 Query: 479 gcgtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatg 538 | |||||||||||| ||||| |||||||| | || || || | |||||| |||| |||| Sbjct: 490 gtgtactcgttgaaatactgtggaaccgacaaacccataaacacggagaatcccacgatg 431 Query: 539 aacttggtcctgaagctgttcaagttgcagaactgaaggaa 579 || || || | ||||||||||| |||||| ||||||||||| Sbjct: 430 aattttgttcggaagctgttcaggttgcaaaactgaaggaa 390
>gb|AY110021.1| Zea mays CL23380_1 mRNA sequence Length = 737 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 ||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 428 gggaagaacttgttgaggttgaatgggagggagtagaactcctcgct 382 Score = 60.0 bits (30), Expect = 1e-05 Identities = 122/150 (81%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 359 gtgttgtccaggaagtaggccaccagccccgcc-acgaacggcttgttcgagaagggcac 417 |||||||||||||| || ||||| ||||||||| ||||||| ||| ||||| ||| Sbjct: 296 gtgttgtccaggaaatacgccac-agccccgccgacgaacgccttcgaggagaataccac 238 Query: 418 gttgatcatgtcgttgaaccatctagcgcccgtgtgcaccgggccatggcccgagacgga 477 ||||| ||| |||||||||||||| || | |||||| ||||||||| ||| | ||||| Sbjct: 237 gttgaccatatcgttgaaccatcttgcacgcgtgtgtaccgggccaaagcctgctacgga 178 Query: 478 ggcgtactcgttgaagtactgaggaaccga 507 | |||||||||||| ||||| || ||||| Sbjct: 177 agtgtactcgttgaaatactgtggcaccga 148
>emb|AM234723.1| Oryza sativa (japonica cultivar-group) mRNA for root uracil permease 1 (rup1 gene) Length = 1973 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 481 gtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaa 540 |||||||||||||||||||||||| || | ||| || || | ||||| || |||||||| Sbjct: 1534 gtactcgttgaagtactgaggaacagaaaggcccataaaaactgagaacccgaggatgaa 1475 Query: 541 cttggtcctgaagctgttcaagttgcagaactgaaggaa 579 |||||||||||| || || | ||||||||||||||||| Sbjct: 1474 cttggtcctgaaactattgagattgcagaactgaaggaa 1436 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 1788 gggaagaacttgttcaggttgaacggcagggaatagaactcctcgct 1742
>ref|XM_463430.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1575 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 238 gttgaggttgaagggcagggagtagaactcctcgctcctggcgtcc 283 ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1554 gttgaggttgaagggcaggctgtagaactcctcgctcctggcgtcc 1509
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 238 gttgaggttgaagggcagggagtagaactcctcgctcctggcgtcc 283 ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 31973155 gttgaggttgaagggcaggctgtagaactcctcgctcctggcgtcc 31973110
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 238 gttgaggttgaagggcagggagtagaactcctcgctcctggcgtcc 283 ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 14969 gttgaggttgaagggcaggctgtagaactcctcgctcctggcgtcc 14924
>dbj|AK103020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116O12, full insert sequence Length = 1481 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 238 gttgaggttgaagggcagggagtagaactcctcgctcctggcgtcc 283 ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1327 gttgaggttgaagggcaggctgtagaactcctcgctcctggcgtcc 1282
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 238 gttgaggttgaagggcagggagtagaactcctcgctcctggcgtcc 283 ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 69882 gttgaggttgaagggcaggctgtagaactcctcgctcctggcgtcc 69837
>ref|NM_104695.3| Arabidopsis thaliana permease AT1G60030 mRNA, complete cds Length = 1941 Score = 73.8 bits (37), Expect = 6e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 482 tactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaac 541 |||| |||||||||||| || | ||||| ||| ||||||| ||||| || |||||||| Sbjct: 1549 tactggttgaagtactgtggtatcgataagcccatgaagaccgagaatccgaggatgaat 1490 Query: 542 ttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgcaccaaca 601 || || ||||||||||| | || ||||||||||| ||||| ||||||| |||||||| Sbjct: 1489 tttgttctgaagctgtttagattacagaactgaagtaagcttagaccaccagcaccaacg 1430 Query: 602 tatgc 606 ||||| Sbjct: 1429 tatgc 1425
>emb|BX813475.1|CNS0ADGW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1866 Score = 73.8 bits (37), Expect = 6e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 482 tactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaac 541 |||| |||||||||||| || | ||||| ||| ||||||| ||||| || |||||||| Sbjct: 1546 tactggttgaagtactgtggtatcgataagcccatgaagaccgagaatccgaggatgaat 1487 Query: 542 ttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccacacgcaccaaca 601 || || ||||||||||| | || ||||||||||| ||||| ||||||| |||||||| Sbjct: 1486 tttgttctgaagctgtttagattacagaactgaagtaagcttagaccaccagcaccaacg 1427 Query: 602 tatgc 606 ||||| Sbjct: 1426 tatgc 1422
>gb|AY104873.1| Zea mays PCO115429 mRNA sequence Length = 2063 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 481 gtactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaa 540 |||||| |||||||| |||||||| || | ||| ||||| | ||||| || |||||||| Sbjct: 1614 gtactcattgaagtattgaggaacagaaaggcccatgaaaactgagaacccaaggatgaa 1555 Query: 541 cttggtcctgaagctgttcaagttgcagaactgaaggaagc 581 ||||||||| ||| |||| | ||| |||||||||||||||| Sbjct: 1554 cttggtcctaaaggtgttgaggttacagaactgaaggaagc 1514 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 217 tcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 273 ||||||||| ||||||||||| || || ||||| |||||||| |||||||||||||| Sbjct: 1878 tcagaccgatgggaagaacttattcagattgaatggcagggaatagaactcctcgct 1822
>ref|XM_482013.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 226 agggaagaacttgttgaggttgaagggcagggagtagaactcctc 270 |||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 1566 agggaagaaccggttgaggttgaagggcagggtgtagaactcctc 1522
>gb|AC005966.2|T2K10 Arabidopsis thaliana chromosome 1 BAC T2K10 sequence, complete sequence Length = 90284 Score = 65.9 bits (33), Expect = 2e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 482 tactcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaac 541 |||| |||||||||||| || | ||||| ||| ||||||| ||||| || |||||||| Sbjct: 42160 tactggttgaagtactgtggtatcgataagcccatgaagaccgagaatccgaggatgaat 42219 Query: 542 ttggtcctgaagctgttcaagttgcagaactgaaggaagctcagaccac 590 || || ||||||||||| | || ||||||||||| ||||| ||||||| Sbjct: 42220 tttgttctgaagctgtttagattacagaactgaagtaagcttagaccac 42268
>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091C18 Length = 154416 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 226 agggaagaacttgttgaggttgaagggcagggagtagaactcctc 270 |||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 112153 agggaagaaccggttgaggttgaagggcagggtgtagaactcctc 112109
>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H03 Length = 189893 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 226 agggaagaacttgttgaggttgaagggcagggagtagaactcctc 270 |||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 48923 agggaagaaccggttgaggttgaagggcagggtgtagaactcctc 48879
>dbj|AK106407.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-H04, full insert sequence Length = 1360 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 226 agggaagaacttgttgaggttgaagggcagggagtagaactcctc 270 |||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 1037 agggaagaaccggttgaggttgaagggcagggtgtagaactcctc 993
>ref|NM_202270.1| Arabidopsis thaliana permease AT1G49960 transcript variant AT1G49960.2 mRNA, complete cds Length = 1909 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 515 atgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactga 574 ||||||| ||||||||| ||||| || || |||| |||||||| ||||||||||||||| Sbjct: 1424 atgaagatggagaagccgaggataaatttattcctaaagctgtttaagttgcagaactga 1365 Query: 575 ag 576 || Sbjct: 1364 ag 1363
>ref|NM_103883.2| Arabidopsis thaliana permease AT1G49960 transcript variant AT1G49960.1 mRNA, complete cds Length = 1829 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 515 atgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactga 574 ||||||| ||||||||| ||||| || || |||| |||||||| ||||||||||||||| Sbjct: 1344 atgaagatggagaagccgaggataaatttattcctaaagctgtttaagttgcagaactga 1285 Query: 575 ag 576 || Sbjct: 1284 ag 1283
>gb|BT000337.1| Arabidopsis thaliana putative permease (At1g49960) mRNA, complete cds Length = 1630 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 515 atgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactga 574 ||||||| ||||||||| ||||| || || |||| |||||||| ||||||||||||||| Sbjct: 1283 atgaagatggagaagccgaggataaatttattcctaaagctgtttaagttgcagaactga 1224 Query: 575 ag 576 || Sbjct: 1223 ag 1222
>gb|AY099842.1| Arabidopsis thaliana putative permease (At1g49960) mRNA, complete cds Length = 1763 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 515 atgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactga 574 ||||||| ||||||||| ||||| || || |||| |||||||| ||||||||||||||| Sbjct: 1344 atgaagatggagaagccgaggataaatttattcctaaagctgtttaagttgcagaactga 1285 Query: 575 ag 576 || Sbjct: 1284 ag 1283
>gb|AY056808.1| Arabidopsis thaliana At1g49960/F2J10_14 mRNA, complete cds Length = 1764 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 515 atgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactga 574 ||||||| ||||||||| ||||| || || |||| |||||||| ||||||||||||||| Sbjct: 1344 atgaagatggagaagccgaggataaatttattcctaaagctgtttaagttgcagaactga 1285 Query: 575 ag 576 || Sbjct: 1284 ag 1283
>emb|BX816462.1|CNS0AEMK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1840 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 515 atgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactga 574 ||||||| ||||||||| ||||| || || |||| |||||||| ||||||||||||||| Sbjct: 1388 atgaagatggagaagccgaggataaatttattcctaaagctgtttaagttgcagaactga 1329 Query: 575 ag 576 || Sbjct: 1328 ag 1327
>gb|AC015445.3|F2J10 Sequence of BAC F2J10 from Arabidopsis thaliana chromosome 1, complete sequence Length = 91720 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 515 atgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactga 574 ||||||| ||||||||| ||||| || || |||| |||||||| ||||||||||||||| Sbjct: 74764 atgaagatggagaagccgaggataaatttattcctaaagctgtttaagttgcagaactga 74823 Query: 575 ag 576 || Sbjct: 74824 ag 74825
>ref|NM_124378.4| Arabidopsis thaliana permease AT5G49990 mRNA, complete cds Length = 1905 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 406 cgagaagggcacgttgatcatgtcgttgaaccatct 441 |||||||||||| |||| |||||||||||||||||| Sbjct: 1493 cgagaagggcacattgaccatgtcgttgaaccatct 1458
>gb|BT008887.1| Arabidopsis thaliana At5g49990 mRNA, complete cds Length = 1587 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 406 cgagaagggcacgttgatcatgtcgttgaaccatct 441 |||||||||||| |||| |||||||||||||||||| Sbjct: 1398 cgagaagggcacattgaccatgtcgttgaaccatct 1363
>gb|AY093137.1| Arabidopsis thaliana permease (At5g49990) mRNA, complete cds Length = 1799 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 406 cgagaagggcacgttgatcatgtcgttgaaccatct 441 |||||||||||| |||| |||||||||||||||||| Sbjct: 1424 cgagaagggcacattgaccatgtcgttgaaccatct 1389
>dbj|AB024032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9P8 Length = 70670 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 406 cgagaagggcacgttgatcatgtcgttgaaccatct 441 |||||||||||| |||| |||||||||||||||||| Sbjct: 68013 cgagaagggcacattgaccatgtcgttgaaccatct 68048
>gb|AC160095.1| Lycopersicon esculentum chromosome 0 clone BB-BA4 map MAP_LOC, complete sequence Length = 121127 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Minus Query: 234 acttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttcttgaagc 293 ||||||| || ||||| || ||||||||||| ||||| || || | ||| |||||||| Sbjct: 33793 acttgttcagattgaaagggagggagtagaattcctcacttctcgtgtcagtcttgaagg 33734 Query: 294 tcctgaacttgtcccaccagtggtaccctctgtcctt 330 | |||| |||||||||||||| | ||||||||||| Sbjct: 33733 acttgaatttgtcccaccagtgcttgcctctgtcctt 33697
>gb|BT013480.1| Lycopersicon esculentum clone 132163F, mRNA sequence Length = 2077 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 518 aagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaactgaagg 577 |||| ||||||||| || ||||||||| | | ||| ||||||| ||||| ||||||||| Sbjct: 1518 aagatggagaagcctagtatgaacttgctacggaaactgttcagattgcaaaactgaagg 1459 Query: 578 aagct 582 ||||| Sbjct: 1458 aagct 1454 Score = 48.1 bits (24), Expect = 0.037 Identities = 81/100 (81%) Strand = Plus / Minus Query: 213 gcgatcagaccgaagggaagaacttgttgaggttgaagggcagggagtagaactcctcgc 272 ||||||| || || ||||| |||||||||| ||||| || ||||| ||||| ||||| | Sbjct: 1823 gcgatcacacggatgggaaatacttgttgagattgaatgggagggaatagaattcctcac 1764 Query: 273 tcctggcgtccttcttgaagctcctgaacttgtcccacca 312 | || | |||| ||||||| | |||||||||||||||| Sbjct: 1763 ttctcgtgtccgtcttgaaagacttgaacttgtcccacca 1724
>gb|AY796114.1| Lycopersicon esculentum clone Le_HBa 153G23 putative transposase, putative BAH domain-containing protein, putative permease I, putative pollen specific LIM domain-containing protein, putative betaine aldehyde dehyrogenase, EDS1, and putative ribosomal-protein S6 kinase-like protein genes, complete cds Length = 121127 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Minus Query: 234 acttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttcttgaagc 293 ||||||| || ||||| || ||||||||||| ||||| || || | ||| |||||||| Sbjct: 33793 acttgttcagattgaaagggagggagtagaattcctcacttctcgtgtcagtcttgaagg 33734 Query: 294 tcctgaacttgtcccaccagtggtaccctctgtcctt 330 | |||| |||||||||||||| | ||||||||||| Sbjct: 33733 acttgaatttgtcccaccagtgcttgcctctgtcctt 33697
>dbj|AP005767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0035G04 Length = 155636 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactc 267 ||||||||| | ||||||||||| ||||||| ||||||||| Sbjct: 127984 gggaagaacctattgaggttgaatggcagggtgtagaactc 127944
>ref|NM_100929.3| Arabidopsis thaliana permease AT1G10540 mRNA, complete cds Length = 1722 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 506 gatatgccgatgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttg 565 |||| ||| ||||||| |||||| || || |||||||| || ||||| ||||||| ||| Sbjct: 1349 gataagcccatgaagatggagaatccaagaatgaacttagttctgaaactgttcagattg 1290 Query: 566 cagaactg 573 |||||||| Sbjct: 1289 cagaactg 1282
>gb|AC126785.11| Medicago truncatula clone mth2-9i24, complete sequence Length = 132702 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 536 atgaacttggtcctgaagctgttcaagttgcagaactgaaggaa 579 ||||| ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 97153 atgaatttggttctaaagctgttcaaattgcaaaactgaaggaa 97110
>gb|AY096464.1| Arabidopsis thaliana putative permease (At1g10540) mRNA, complete cds Length = 1651 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 506 gatatgccgatgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttg 565 |||| ||| ||||||| |||||| || || |||||||| || ||||| ||||||| ||| Sbjct: 1331 gataagcccatgaagatggagaatccaagaatgaacttagttctgaaactgttcagattg 1272 Query: 566 cagaactg 573 |||||||| Sbjct: 1271 cagaactg 1264
>gb|AY063935.1| Arabidopsis thaliana putative permease (At1g10540) mRNA, complete cds Length = 1739 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 506 gatatgccgatgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttg 565 |||| ||| ||||||| |||||| || || |||||||| || ||||| ||||||| ||| Sbjct: 1350 gataagcccatgaagatggagaatccaagaatgaacttagttctgaaactgttcagattg 1291 Query: 566 cagaactg 573 |||||||| Sbjct: 1290 cagaactg 1283
>gb|AC007067.4|AC007067 Genomic sequence for Arabidopsis thaliana BAC T10O24 from Chromosome 1, complete sequence Length = 89934 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Plus Query: 506 gatatgccgatgaagaaggagaagcccaggatgaacttggtcctgaagctgttcaagttg 565 |||| ||| ||||||| |||||| || || |||||||| || ||||| ||||||| ||| Sbjct: 56474 gataagcccatgaagatggagaatccaagaatgaacttagttctgaaactgttcagattg 56533 Query: 566 cagaactg 573 |||||||| Sbjct: 56534 cagaactg 56541
>emb|AJ843123.1| Plantago major partial mRNA for putative xanthine/uracil permease (xup1 gene) Length = 584 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 407 gagaagggcacgttgatcatgtcgttgaaccatct 441 ||||| || ||||||| |||||||||||||||||| Sbjct: 114 gagaatgggacgttgaccatgtcgttgaaccatct 80 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Minus Query: 227 gggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttc 286 |||||| | |||||||| ||||| || ||||| ||||||||||| || || ||||| || Sbjct: 294 gggaagtatttgttgagattgaatgggagggaatagaactcctcacttcttgcgtcggtc 235 Query: 287 ttgaagctcctgaacttgtcccaccagtg 315 ||| | ||||||||||||||||||| Sbjct: 234 ttgtatgatttgaacttgtcccaccagtg 206 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tactcgttgaagtactgagg 501 |||||||||||||||||||| Sbjct: 39 tactcgttgaagtactgagg 20
>gb|AC035249.7|AC035249 Arabidopsis thaliana chromosome 1 BAC F8D11 genomic sequence, complete sequence Length = 109431 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 524 gagaagcccaggatgaacttggtcctgaagctgttcaagttgcagaa 570 ||||||||||| |||||| ||||||||||| |||| ||||||||| Sbjct: 65230 gagaagcccagtatgaacaatgtcctgaagctattcaggttgcagaa 65184
>ref|XM_469355.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1764 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 251 ggcagggagtagaactcctcgctcct 276 ||||| |||||||||||||||||||| Sbjct: 1592 ggcagagagtagaactcctcgctcct 1567
>gb|AC140026.11| Medicago truncatula clone mth2-36j24, complete sequence Length = 162172 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 420 tgatcatgtcgttgaaccatct 441 |||||||||||||||||||||| Sbjct: 94439 tgatcatgtcgttgaaccatct 94418
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 251 ggcagggagtagaactcctcgctcct 276 ||||| |||||||||||||||||||| Sbjct: 26410 ggcagagagtagaactcctcgctcct 26435
>dbj|AK110834.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A10, full insert sequence Length = 1703 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 251 ggcagggagtagaactcctcgctcct 276 ||||| |||||||||||||||||||| Sbjct: 373 ggcagagagtagaactcctcgctcct 398
>dbj|AK100981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144M20, full insert sequence Length = 1922 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 251 ggcagggagtagaactcctcgctcct 276 ||||| |||||||||||||||||||| Sbjct: 1633 ggcagagagtagaactcctcgctcct 1608
>ref|XM_509851.1| PREDICTED: Pan troglodytes similar to BCL-WEL (LOC452796), mRNA Length = 790 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 441 ctcctgcacttgtcccaccagtggt 417
>gb|BT019549.1| Homo sapiens BCL2-like 2 mRNA, complete cds Length = 582 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|BT019548.1| Synthetic construct Homo sapiens BCL2-like 2 mRNA, partial cds Length = 582 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cttgttgaggttgaagggcag 255 ||||||||||||||||||||| Sbjct: 1514902 cttgttgaggttgaagggcag 1514882
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 tgtccaggaagtaggccacca 383 ||||||||||||||||||||| Sbjct: 4402948 tgtccaggaagtaggccacca 4402928
>ref|XM_570476.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND05600) partial mRNA Length = 389 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cttgttgaggttgaagggcag 255 ||||||||||||||||||||| Sbjct: 251 cttgttgaggttgaagggcag 231
>gb|BC011637.1| Homo sapiens mRNA similar to BCL2-like 2 (cDNA clone IMAGE:4106836) Length = 1250 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 537 ctcctgcacttgtcccaccagtggt 513
>ref|NM_004050.2| Homo sapiens BCL2-like 2 (BCL2L2), mRNA Length = 3542 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 548 ctcctgcacttgtcccaccagtggt 524
>gb|AY927500.1| Homo sapiens mRNA sequence Length = 672 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 147 ctcctgcacttgtcccaccagtggt 171
>gb|AY892894.1| Synthetic construct Homo sapiens clone FLH135020.01L BCL2-like 2 (BCL2L2) mRNA, partial cds Length = 582 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|AY890433.1| Synthetic construct Homo sapiens clone FLH135024.01X BCL2-like 2 (BCL2L2) mRNA, complete cds Length = 582 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|AY888229.1| Synthetic construct Homo sapiens clone FLH020218.01X BCL2-like 2 (BCL2L2) mRNA, complete cds Length = 582 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|AY888228.1| Synthetic construct Homo sapiens clone FLH020217.01X BCL2-like 2 (BCL2L2) mRNA, complete cds Length = 582 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|AY890819.1| Synthetic construct Homo sapiens clone FLH020213.01L BCL2-like 2 (BCL2L2) mRNA, partial cds Length = 582 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>dbj|D87461.1| Homo sapiens mRNA for KIAA0271 gene, partial cds Length = 3542 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 548 ctcctgcacttgtcccaccagtggt 524
>gb|BC104789.1| Homo sapiens BCL2-like 2, mRNA (cDNA clone MGC:132449 IMAGE:8143792), complete cds Length = 1579 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 537 ctcctgcacttgtcccaccagtggt 513
>emb|AL049829.4|CNS0000B Human chromosome 14 DNA sequence BAC R-124D2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196292 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 90197 ctcctgcacttgtcccaccagtggt 90173
>gb|U59747.1|HSU59747 Human Bcl-w (bcl-w) mRNA, complete cds Length = 582 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ctcctgaacttgtcccaccagtggt 317 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|AC163099.5| Mus musculus chromosome 8, clone RP23-395L6, complete sequence Length = 188439 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 630 caaatataggcaatggaatg 649 |||||||||||||||||||| Sbjct: 180420 caaatataggcaatggaatg 180439
>ref|XM_510241.1| PREDICTED: Pan troglodytes similar to IFI27 protein (LOC453250), mRNA Length = 1028 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 817 agcccaggatgaacttggtc 798
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gctctggtgcaggtgcatcg 359 |||||||||||||||||||| Sbjct: 6071500 gctctggtgcaggtgcatcg 6071519
>gb|AC116393.10| Mus musculus chromosome 15, clone RP23-94I16, complete sequence Length = 217156 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tgtgcaccgggccatggccc 469 |||||||||||||||||||| Sbjct: 91520 tgtgcaccgggccatggccc 91539
>ref|XM_425873.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ10572 (LOC428313), mRNA Length = 2208 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 240 tgaggttgaagggcagggagtagaactcctcg 271 |||||| ||||||||| | ||||||||||||| Sbjct: 811 tgaggtggaagggcagcgtgtagaactcctcg 780
>ref|XM_456531.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A04840g) partial mRNA Length = 1362 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 atcaagctagcaggaccatg 154 |||||||||||||||||||| Sbjct: 890 atcaagctagcaggaccatg 871
>gb|AC110559.11| Mus musculus chromosome 7, clone RP23-253E12, complete sequence Length = 192856 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 579 agctcagaccacacgcaccaacat 602 |||||||||||||| ||||||||| Sbjct: 106841 agctcagaccacacacaccaacat 106864
>gb|AC146267.3| Pan troglodytes BAC clone CH251-55N11 from X, complete sequence Length = 172439 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 551 aagctgttcaagttgcagaactga 574 |||||||||| ||||||||||||| Sbjct: 137438 aagctgttcaggttgcagaactga 137415
>gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosome 12, complete sequence Length = 175727 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 agaaggagaagcccaggatg 538 |||||||||||||||||||| Sbjct: 141407 agaaggagaagcccaggatg 141426
>ref|NM_005532.3| Homo sapiens interferon, alpha-inducible protein 27 (IFI27), mRNA Length = 656 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 439 agcccaggatgaacttggtc 420
>gb|AC122023.3| Mus musculus BAC clone RP24-372O13 from 12, complete sequence Length = 179947 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 agaaggagaagcccaggatg 538 |||||||||||||||||||| Sbjct: 1974 agaaggagaagcccaggatg 1993
>gb|BC015492.1| Homo sapiens interferon, alpha-inducible protein 27, mRNA (cDNA clone MGC:8967 IMAGE:3915505), complete cds Length = 729 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 504 agcccaggatgaacttggtc 485
>gb|BC052010.1| Mus musculus rhophilin, Rho GTPase binding protein 1, mRNA (cDNA clone MGC:62337 IMAGE:5717786), complete cds Length = 2301 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tgtgcaccgggccatggccc 469 |||||||||||||||||||| Sbjct: 1052 tgtgcaccgggccatggccc 1071
>emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chromosome 1 Contains a novel gene, complete sequence Length = 203279 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 528 agcccaggatgaacttggtcctga 551 |||||||||||||||||| ||||| Sbjct: 113714 agcccaggatgaacttgggcctga 113737
>emb|AL121919.20|HSJ492J12 Human DNA sequence from clone RP3-492J12 on chromosome 20 Contains the C20orf174 gene for chromosome 20 open reading frame 174 and a CpG island, complete sequence Length = 129942 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 tgaacttggtcctgaagctg 556 |||||||||||||||||||| Sbjct: 115583 tgaacttggtcctgaagctg 115564
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tatgccgatgaagaaggaga 527 |||||||||||||||||||| Sbjct: 11542 tatgccgatgaagaaggaga 11523
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 atcaagctagcaggaccatg 154 |||||||||||||||||||| Sbjct: 382626 atcaagctagcaggaccatg 382607
>gb|BT007737.1| Synthetic construct Homo sapiens interferon, alpha-inducible protein 27 mRNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 316 agcccaggatgaacttggtc 297
>gb|BT006781.1| Homo sapiens interferon, alpha-inducible protein 27 mRNA, complete cds Length = 360 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 316 agcccaggatgaacttggtc 297
>emb|AL833682.1|HSM804995 Homo sapiens mRNA; cDNA DKFZp667G1522 (from clone DKFZp667G1522) Length = 5206 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 tgaacttggtcctgaagctg 556 |||||||||||||||||||| Sbjct: 3595 tgaacttggtcctgaagctg 3576
>emb|AL450321.15| Mouse DNA sequence from clone RP23-232M10 on chromosome 13 Contains a novel gene, a non-POU domain containing octamer-binding protein (Nono) pseudogene, a Sin3-associated polypeptide 18 (Sap18) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 209175 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 gttgcagaactgaaggaagc 581 |||||||||||||||||||| Sbjct: 130419 gttgcagaactgaaggaagc 130400
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 caccgcgctctggtgcaggtgcat 357 |||| ||||||||||||||||||| Sbjct: 3306302 caccacgctctggtgcaggtgcat 3306325
>dbj|AK220431.1| Mus musculus mRNA for mKIAA1929 protein Length = 2030 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tgtgcaccgggccatggccc 469 |||||||||||||||||||| Sbjct: 1010 tgtgcaccgggccatggccc 1029
>gb|DQ397860.1| Cenarchaeum symbiosum clone C07E09, complete sequence Length = 42614 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 ccgagacggaggcgtactcg 487 |||||||||||||||||||| Sbjct: 37603 ccgagacggaggcgtactcg 37622
>dbj|AK095039.1| Homo sapiens cDNA FLJ37720 fis, clone BRHIP2019149, moderately similar to Interferon, alpha-inducible protein 27 Length = 2431 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 2226 agcccaggatgaacttggtc 2207
>ref|NM_169522.1| Drosophila melanogaster CG8863-RE, transcript variant E (CG8863), mRNA Length = 1820 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 gagaagggcacgttgatcat 426 |||||||||||||||||||| Sbjct: 1061 gagaagggcacgttgatcat 1080
>ref|NM_169521.1| Drosophila melanogaster CG8863-RD, transcript variant D (CG8863), mRNA Length = 1868 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 gagaagggcacgttgatcat 426 |||||||||||||||||||| Sbjct: 1109 gagaagggcacgttgatcat 1128
>ref|NM_169520.1| Drosophila melanogaster CG8863-RC, transcript variant C (CG8863), mRNA Length = 1818 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 gagaagggcacgttgatcat 426 |||||||||||||||||||| Sbjct: 1059 gagaagggcacgttgatcat 1078
>ref|NM_169519.1| Drosophila melanogaster CG8863-RB, transcript variant B (CG8863), mRNA Length = 2051 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 gagaagggcacgttgatcat 426 |||||||||||||||||||| Sbjct: 1292 gagaagggcacgttgatcat 1311
>ref|NM_142026.2| Drosophila melanogaster CG8863-RA, transcript variant A (CG8863), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 gagaagggcacgttgatcat 426 |||||||||||||||||||| Sbjct: 1161 gagaagggcacgttgatcat 1180
>dbj|AK143132.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130112L16 product:rhophilin, Rho GTPase binding protein 1, full insert sequence Length = 2608 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tgtgcaccgggccatggccc 469 |||||||||||||||||||| Sbjct: 1064 tgtgcaccgggccatggccc 1083
>gb|AC079239.6| Homo sapiens BAC clone RP11-722M1 from 4, complete sequence Length = 182406 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aacttgttgaggttgaaggg 252 |||||||||||||||||||| Sbjct: 45167 aacttgttgaggttgaaggg 45148
>gb|AC005628.4| Homo sapiens PAC clone RP4-613C23 from Xq23, complete sequence Length = 117489 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 551 aagctgttcaagttgcagaactga 574 |||||||||| ||||||||||||| Sbjct: 39164 aagctgttcaggttgcagaactga 39141
>ref|XM_940057.1| PREDICTED: Homo sapiens chromosome 20 open reading frame 174 (C20orf174), mRNA Length = 6323 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 tgaacttggtcctgaagctg 556 |||||||||||||||||||| Sbjct: 4728 tgaacttggtcctgaagctg 4709
>ref|XM_066058.4| PREDICTED: Homo sapiens chromosome 20 open reading frame 174 (C20orf174), mRNA Length = 6321 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 tgaacttggtcctgaagctg 556 |||||||||||||||||||| Sbjct: 4728 tgaacttggtcctgaagctg 4709
>gb|AY060982.1| Drosophila melanogaster GM13664 full length cDNA Length = 1859 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 gagaagggcacgttgatcat 426 |||||||||||||||||||| Sbjct: 1090 gagaagggcacgttgatcat 1109
>gb|AC158315.9| Mus musculus chromosome 7, clone RP23-146D22, complete sequence Length = 212973 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 579 agctcagaccacacgcaccaacat 602 |||||||||||||| ||||||||| Sbjct: 162288 agctcagaccacacacaccaacat 162265
>gb|AC008360.3|AC008360 Drosophila melanogaster, chromosome 3R, region 87E-87F, BAC clone BACR06H18, complete sequence Length = 194672 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 gagaagggcacgttgatcat 426 |||||||||||||||||||| Sbjct: 85661 gagaagggcacgttgatcat 85680
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tatgccgatgaagaaggaga 527 |||||||||||||||||||| Sbjct: 1302056 tatgccgatgaagaaggaga 1302037
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tatgccgatgaagaaggaga 527 |||||||||||||||||||| Sbjct: 1392747 tatgccgatgaagaaggaga 1392728
>gb|AC108150.4| Homo sapiens BAC clone RP11-492E24 from 2, complete sequence Length = 75818 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 gttcaagttgcagaactgaa 575 |||||||||||||||||||| Sbjct: 872 gttcaagttgcagaactgaa 891
>gb|BC033155.1| Homo sapiens, Similar to chromosome 20 open reading frame 174, clone IMAGE:4139515, mRNA Length = 1962 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 tgaacttggtcctgaagctg 556 |||||||||||||||||||| Sbjct: 344 tgaacttggtcctgaagctg 325
>gb|AC016706.6| Homo sapiens BAC clone RP11-215D12 from 2, complete sequence Length = 184121 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 gttcaagttgcagaactgaa 575 |||||||||||||||||||| Sbjct: 182993 gttcaagttgcagaactgaa 183012
>gb|AE004467.1| Pseudomonas aeruginosa PAO1, section 28 of 529 of the complete genome Length = 12795 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 gctctggtgcaggtgcatcg 359 |||||||||||||||||||| Sbjct: 10708 gctctggtgcaggtgcatcg 10689
>ref|XM_216954.3| PREDICTED: Rattus norvegicus rhophilin, Rho GTPase binding protein 1 (predicted) (Rhpn1_predicted), mRNA Length = 2868 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tgtgcaccgggccatggccc 469 |||||||||||||||||||| Sbjct: 1800 tgtgcaccgggccatggccc 1819
>gb|AY891486.1| Synthetic construct Homo sapiens clone FLH012846.01L interferon alpha-inducible protein 27 (IFI27) mRNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 316 agcccaggatgaacttggtc 297
>gb|AY891485.1| Synthetic construct Homo sapiens clone FLH012845.01L interferon alpha-inducible protein 27 (IFI27) mRNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 316 agcccaggatgaacttggtc 297
>gb|AY888855.1| Synthetic construct Homo sapiens clone FLH012850.01X interferon alpha-inducible protein 27 (IFI27) mRNA, complete cds Length = 360 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 316 agcccaggatgaacttggtc 297
>gb|AY888854.1| Synthetic construct Homo sapiens clone FLH012849.01X interferon alpha-inducible protein 27 (IFI27) mRNA, complete cds Length = 360 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 316 agcccaggatgaacttggtc 297
>emb|BX647330.1|HSM807474 Homo sapiens mRNA; cDNA DKFZp686F05171 (from clone DKFZp686F05171) Length = 819 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 445 agcccaggatgaacttggtc 426
>gb|AY888570.1| Synthetic construct Homo sapiens clone FLH117452.01X interferon alpha-inducible protein 27 (IFI27) mRNA, complete cds Length = 369 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 325 agcccaggatgaacttggtc 306
>gb|AY891219.1| Synthetic construct Homo sapiens clone FLH117448.01L interferon alpha-inducible protein 27 (IFI27) mRNA, partial cds Length = 369 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 325 agcccaggatgaacttggtc 306
>gb|AY893755.1| Synthetic construct Homo sapiens clone FLH053969.01L interferon alpha-inducible protein 27 (IFI27) mRNA, partial cds Length = 369 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 325 agcccaggatgaacttggtc 306
>gb|AY893304.1| Synthetic construct Homo sapiens clone FLH053973.01X interferon alpha-inducible protein 27 (IFI27) mRNA, complete cds Length = 369 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 325 agcccaggatgaacttggtc 306
>dbj|AK059458.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C06, full insert sequence Length = 1025 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tatgccgatgaagaaggaga 527 |||||||||||||||||||| Sbjct: 247 tatgccgatgaagaaggaga 266
>tpe|BN000227.1|HSA000227 TPA: TPA_exp: Homo sapiens mRNA for putative ISG12(a) protein (ISG12(a) gene) Length = 672 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 445 agcccaggatgaacttggtc 426
>gb|AE003700.3| Drosophila melanogaster chromosome 3R, section 38 of 118 of the complete sequence Length = 228324 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 gagaagggcacgttgatcat 426 |||||||||||||||||||| Sbjct: 12162 gagaagggcacgttgatcat 12181
>emb|AL079302.7|CNS00M8S Human chromosome 14 DNA sequence BAC R-1089B7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 204230 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 201811 agcccaggatgaacttggtc 201792
>gb|U43194.1|MMU43194 Mus musculus rhophilin mRNA, complete cds Length = 1932 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tgtgcaccgggccatggccc 469 |||||||||||||||||||| Sbjct: 987 tgtgcaccgggccatggccc 1006
>gb|AC107236.8| Mus musculus chromosome 8, clone RP23-296C23, complete sequence Length = 193105 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 630 caaatataggcaatggaatg 649 |||||||||||||||||||| Sbjct: 88536 caaatataggcaatggaatg 88555
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tatgccgatgaagaaggaga 527 |||||||||||||||||||| Sbjct: 1390468 tatgccgatgaagaaggaga 1390449
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tatgccgatgaagaaggaga 527 |||||||||||||||||||| Sbjct: 1302056 tatgccgatgaagaaggaga 1302037
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tatgccgatgaagaaggaga 527 |||||||||||||||||||| Sbjct: 127113 tatgccgatgaagaaggaga 127132
>gb|AF069323.1|AF069323 Mesembryanthemum crystallinum clone R6-3 permease 1 mRNA, complete cds Length = 2054 Score = 40.1 bits (20), Expect = 9.0 Identities = 80/100 (80%) Strand = Plus / Minus Query: 483 actcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaact 542 |||||||||||||||| |||| || | || ||||||| ||||| || || ||||||| Sbjct: 1449 actcgttgaagtactgtggaatggaaagacccatgaagagagagaatcctagtatgaact 1390 Query: 543 tggtcctgaagctgttcaagttgcagaactgaaggaagct 582 | | ||||| ||||| | |||||||||||| || ||||| Sbjct: 1389 ttgatctgaaactgttaaggttgcagaactggagaaagct 1350
>gb|AF069322.1|AF069322 Mesembryanthemum crystallinum clone R30-9 permease 1 mRNA, complete cds Length = 2102 Score = 40.1 bits (20), Expect = 9.0 Identities = 80/100 (80%) Strand = Plus / Minus Query: 483 actcgttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaact 542 |||||||||||||||| |||| || | || ||||||| ||||| || || ||||||| Sbjct: 1455 actcgttgaagtactgtggaatggaaagacccatgaagagagagaatcctagtatgaact 1396 Query: 543 tggtcctgaagctgttcaagttgcagaactgaaggaagct 582 | | ||||| ||||| | |||||||||||| || ||||| Sbjct: 1395 ttgatctgaaactgttaaggttgcagaactggagaaagct 1356
>ref|NM_008164.1| Mus musculus rhophilin, Rho GTPase binding protein 1 (Rhpn1), mRNA Length = 1932 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tgtgcaccgggccatggccc 469 |||||||||||||||||||| Sbjct: 987 tgtgcaccgggccatggccc 1006
>gb|AC003923.1|AC003923 Drosophila melanogaster (P1 DS04219 (D36)) DNA sequence, complete sequence Length = 82393 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gagaagggcacgttgatcat 426 |||||||||||||||||||| Sbjct: 62866 gagaagggcacgttgatcat 62847
>emb|AL121838.4|CNS01DSP Human chromosome 14 DNA sequence BAC C-2068J7 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 99679 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 5730 agcccaggatgaacttggtc 5711
>emb|X67325.1|HSP27 Homo sapiens mRNA for ISG12 protein Length = 597 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 agcccaggatgaacttggtc 547 |||||||||||||||||||| Sbjct: 379 agcccaggatgaacttggtc 360
>emb|AL713683.1|HSM803032 Homo sapiens mRNA; cDNA DKFZp667D092 (from clone DKFZp667D092) Length = 1936 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 tgaacttggtcctgaagctg 556 |||||||||||||||||||| Sbjct: 312 tgaacttggtcctgaagctg 293
>emb|AL590282.6| Human DNA sequence from clone RP13-210D15 on chromosome Xq26.1-26.3, complete sequence Length = 139296 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 551 aagctgttcaagttgcagaactga 574 |||||||||| ||||||||||||| Sbjct: 130794 aagctgttcaggttgcagaactga 130771 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,671,711 Number of Sequences: 3902068 Number of extensions: 4671711 Number of successful extensions: 114330 Number of sequences better than 10.0: 164 Number of HSP's better than 10.0 without gapping: 166 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 113409 Number of HSP's gapped (non-prelim): 910 length of query: 656 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 633 effective length of database: 17,143,297,704 effective search space: 10851707446632 effective search space used: 10851707446632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
