ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd0b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC158617.9| Mus musculus 10 BAC RP23-283O2 (Roswell Park Canc... 46 0.11
2emb|BX855612.9| Zebrafish DNA sequence from clone CH211-198C22 i... 44 0.44
3gb|AC165958.2| Mus musculus BAC clone RP23-417I20 from chromosom... 42 1.8
4gb|AC169508.1| Mus musculus BAC clone RP23-167I21 from chromosom... 42 1.8
5emb|AL021483.1|CEY38H8A Caenorhabditis elegans YAC Y38H8A, compl... 42 1.8
6gb|U43532.1|SSU43532 Symbiodinium sp. ribulosebisphosphate carbo... 42 1.8
7emb|AL138498.5|CNS01DWT Human chromosome 14 DNA sequence BAC R-1... 42 1.8
8gb|AC175380.2| Mus musculus BAC clone RP24-333L5 from chromosome... 40 6.9
9gb|AC109807.9| Mus musculus chromosome 1, clone RP23-433B11, com... 40 6.9
10ref|NM_146250.1| Mus musculus G protein-coupled receptor 1 (Gpr1... 40 6.9
11gb|AC140347.3| Mus musculus BAC clone RP23-233K3 from chromosome... 40 6.9
12gb|AC101758.6| Mus musculus chromosome 1, clone RP24-75F14, comp... 40 6.9
13gb|AC110815.6| Mus musculus BAC clone RP23-2I10 from chromosome ... 40 6.9
14emb|CR450685.13| Zebrafish DNA sequence from clone DKEY-83K24 in... 40 6.9
15gb|AC115295.4| Mus musculus BAC clone RP23-188O19 from 3, comple... 40 6.9
16ref|XM_947108.1| Theileria annulata strain Ankara ATP-dependent ... 40 6.9
17gb|AC144343.8| Medicago truncatula clone mth2-12c21, complete se... 40 6.9
18emb|CR405713.7| Zebrafish DNA sequence from clone DKEY-12D5 in l... 40 6.9
19emb|Z82202.1|HS34P24 Human DNA sequence from clone RP1-34P24 on ... 40 6.9
20emb|AL645950.13| Mouse DNA sequence from clone RP23-13C17 on chr... 40 6.9
21emb|CR382340.7| Zebrafish DNA sequence from clone DKEY-151G10 in... 40 6.9
22emb|BX936333.10| Zebrafish DNA sequence from clone CH211-90O16 i... 40 6.9
23gb|BC032934.1| Mus musculus G protein-coupled receptor 1, mRNA (... 40 6.9
24gb|AC098648.2| Homo sapiens chromosome 3 clone RP11-240N7, compl... 40 6.9
25emb|BX005102.6| Zebrafish DNA sequence from clone CH211-105H13 i... 40 6.9
26gb|AC154911.4| Mus musculus BAC clone RP23-25I3 from chromosome ... 40 6.9
27gb|AC154817.2| Mus musculus BAC clone RP23-72G6 from chromosome ... 40 6.9
28gb|AC154203.2| Mus musculus BAC clone RP24-387L1 from chromosome... 40 6.9
29gb|AC161493.6| Mus musculus chromosome 1, clone RP24-77I21, comp... 40 6.9
30ref|XM_393457.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 6.9
31gb|AC018685.12| Homo sapiens BAC clone RP11-455M16 from 2, compl... 40 6.9
32emb|BX323575.10| Zebrafish DNA sequence from clone CH211-278N20 ... 40 6.9
33emb|BX248129.5| Zebrafish DNA sequence from clone CH211-196M16 i... 40 6.9
34dbj|BS000163.1| Pan troglodytes chromosome 22 clone:RP43-010B02,... 40 6.9
35emb|BX640585.2| Pig DNA sequence from clone XX-279G2, complete s... 40 6.9
36emb|CT485603.4| RP43-005L22, complete sequence 40 6.9
37emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in ... 40 6.9
38gb|AY107587.1| Zea mays PCO129703 mRNA sequence 40 6.9
39gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome 40 6.9
40emb|AL935211.7| Zebrafish DNA sequence from clone CH211-227L1, c... 40 6.9
41emb|BX927393.12| Zebrafish DNA sequence from clone CH211-231B2 i... 40 6.9
42gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome... 40 6.9
43gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complet... 40 6.9
44emb|AL807818.14| Zebrafish DNA sequence from clone CH211-225H24,... 40 6.9
45emb|CT030126.6| Mouse DNA sequence from clone RP23-430F12 on chr... 40 6.9
46gb|M62985.1|MZESMDPK Maize putative protein kinase mRNA, 3' end 40 6.9 
>gb|AC158617.9| Mus musculus 10 BAC RP23-283O2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 240410

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 2     ataatacaatacaacacaatata 24
             |||||||||||||||||||||||
Sbjct: 90749 ataatacaatacaacacaatata 90771
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>emb|BX855612.9| Zebrafish DNA sequence from clone CH211-198C22 in linkage group 19,
             complete sequence
          Length = 212866

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1     aataatacaatacaacacaata 22
             ||||||||||||||||||||||
Sbjct: 50841 aataatacaatacaacacaata 50820
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>gb|AC165958.2| Mus musculus BAC clone RP23-417I20 from chromosome 16, complete sequence
          Length = 186202

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 48     acaagtataacaacaacaaca 68
              |||||||||||||||||||||
Sbjct: 133596 acaagtataacaacaacaaca 133616
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>gb|AC169508.1| Mus musculus BAC clone RP23-167I21 from chromosome 16, complete
             sequence
          Length = 211870

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    acaagtataacaacaacaaca 68
             |||||||||||||||||||||
Sbjct: 86118 acaagtataacaacaacaaca 86138
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>emb|AL021483.1|CEY38H8A Caenorhabditis elegans YAC Y38H8A, complete sequence
          Length = 35077

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 333   aaatactcaaaaaaccaagac 353
             |||||||||||||||||||||
Sbjct: 24893 aaatactcaaaaaaccaagac 24913
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>gb|U43532.1|SSU43532 Symbiodinium sp. ribulosebisphosphate carboxylase form II polyprotein
            precursor (rbcA) gene, partial cds
          Length = 6900

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 2    ataatacaatacaacacaata 22
            |||||||||||||||||||||
Sbjct: 6696 ataatacaatacaacacaata 6676
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>emb|AL138498.5|CNS01DWT Human chromosome 14 DNA sequence BAC R-168D12 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158885

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     aatacaatacaacacaatata 24
             |||||||||||||||||||||
Sbjct: 46432 aatacaatacaacacaatata 46452
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>gb|AC175380.2| Mus musculus BAC clone RP24-333L5 from chromosome 13, complete
            sequence
          Length = 164055

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 301  aaatacataataacaaacaa 320
            ||||||||||||||||||||
Sbjct: 1995 aaatacataataacaaacaa 1976
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>gb|AC109807.9| Mus musculus chromosome 1, clone RP23-433B11, complete sequence
          Length = 227679

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   ggcctgttcatctctgtccc 454
             ||||||||||||||||||||
Sbjct: 52206 ggcctgttcatctctgtccc 52225
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>ref|NM_146250.1| Mus musculus G protein-coupled receptor 1 (Gpr1), mRNA
          Length = 1647

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cagacaagtataacaacaac 64
           ||||||||||||||||||||
Sbjct: 707 cagacaagtataacaacaac 688
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>gb|AC140347.3| Mus musculus BAC clone RP23-233K3 from chromosome 7, complete
            sequence
          Length = 153366

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   caagtataacaacaacaaca 68
            ||||||||||||||||||||
Sbjct: 9226 caagtataacaacaacaaca 9245
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>gb|AC101758.6| Mus musculus chromosome 1, clone RP24-75F14, complete sequence
          Length = 268826

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    ggcctgttcatctctgtccc 454
              ||||||||||||||||||||
Sbjct: 133657 ggcctgttcatctctgtccc 133676
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>gb|AC110815.6| Mus musculus BAC clone RP23-2I10 from chromosome 12, complete sequence
          Length = 186797

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 305   acataataacaaacaacatatagc 328
             ||||||||| ||||||||||||||
Sbjct: 99867 acataataaaaaacaacatatagc 99890
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>emb|CR450685.13| Zebrafish DNA sequence from clone DKEY-83K24 in linkage group 8,
             complete sequence
          Length = 195473

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     atacaatacaacacaatata 24
             ||||||||||||||||||||
Sbjct: 51621 atacaatacaacacaatata 51640
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>gb|AC115295.4| Mus musculus BAC clone RP23-188O19 from 3, complete sequence
          Length = 202201

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   taaatactcaaaaaaccaag 351
             ||||||||||||||||||||
Sbjct: 91203 taaatactcaaaaaaccaag 91184
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>ref|XM_947108.1| Theileria annulata strain Ankara ATP-dependent RNA helicase (TA13610)
            partial mRNA
          Length = 3084

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 128  tatcttctattctcatcaaa 147
            ||||||||||||||||||||
Sbjct: 1627 tatcttctattctcatcaaa 1608
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>gb|AC144343.8| Medicago truncatula clone mth2-12c21, complete sequence
          Length = 130740

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   agtaaatacataataacaaa 317
             ||||||||||||||||||||
Sbjct: 19473 agtaaatacataataacaaa 19492
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>emb|CR405713.7| Zebrafish DNA sequence from clone DKEY-12D5 in linkage group 8,
             complete sequence
          Length = 99181

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     atacaatacaacacaatata 24
             ||||||||||||||||||||
Sbjct: 35674 atacaatacaacacaatata 35655
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>emb|Z82202.1|HS34P24 Human DNA sequence from clone RP1-34P24 on chromosome 22, complete
             sequence
          Length = 105357

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 475   gctgtgaacagctcctttcacctt 498
             |||||||| |||||||||||||||
Sbjct: 63368 gctgtgaatagctcctttcacctt 63391
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>emb|AL645950.13| Mouse DNA sequence from clone RP23-13C17 on chromosome 1 Contains the
             Eef1b2 gene for eukaryotic translation elongation factor 1
             beta 2, the Ndufs1 gene for NADH dehydrogenase
             (ubiquinone) Fe-S protein 1 (Ndufs1), the Gpr1 gene for
             G-protein coupled receptor 1, the 5' end of a novel gene,
             two novel genes and two CpG islands, complete sequence
          Length = 138564

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    cagacaagtataacaacaac 64
             ||||||||||||||||||||
Sbjct: 78614 cagacaagtataacaacaac 78633
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>emb|CR382340.7| Zebrafish DNA sequence from clone DKEY-151G10 in linkage group 23,
              complete sequence
          Length = 158509

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      ataatacaatacaacacaat 21
              ||||||||||||||||||||
Sbjct: 135250 ataatacaatacaacacaat 135269
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>emb|BX936333.10| Zebrafish DNA sequence from clone CH211-90O16 in linkage group 3,
             complete sequence
          Length = 167766

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 2     ataatacaatacaacacaatatac 25
             |||||||||||||| |||||||||
Sbjct: 63359 ataatacaatacaatacaatatac 63336
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>gb|BC032934.1| Mus musculus G protein-coupled receptor 1, mRNA (cDNA clone
           MGC:41704 IMAGE:1363204), complete cds
          Length = 1647

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cagacaagtataacaacaac 64
           ||||||||||||||||||||
Sbjct: 707 cagacaagtataacaacaac 688
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>gb|AC098648.2| Homo sapiens chromosome 3 clone RP11-240N7, complete sequence
          Length = 151924

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 223   caatggcatccagatgttgctttt 246
             |||| |||||||||||||||||||
Sbjct: 45830 caattgcatccagatgttgctttt 45853
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>emb|BX005102.6| Zebrafish DNA sequence from clone CH211-105H13 in linkage group 8,
              complete sequence
          Length = 154770

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    taaatacataataacaaaca 319
              ||||||||||||||||||||
Sbjct: 132505 taaatacataataacaaaca 132524
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>gb|AC154911.4| Mus musculus BAC clone RP23-25I3 from chromosome 7, complete sequence
          Length = 228885

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     caagtataacaacaacaaca 68
              ||||||||||||||||||||
Sbjct: 114639 caagtataacaacaacaaca 114658
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>gb|AC154817.2| Mus musculus BAC clone RP23-72G6 from chromosome 13, complete sequence
          Length = 143739

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   aaatacataataacaaacaa 320
             ||||||||||||||||||||
Sbjct: 31486 aaatacataataacaaacaa 31467
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>gb|AC154203.2| Mus musculus BAC clone RP24-387L1 from chromosome 13, complete sequence
          Length = 174845

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   aaatacataataacaaacaa 320
             ||||||||||||||||||||
Sbjct: 20165 aaatacataataacaaacaa 20184
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>gb|AC161493.6| Mus musculus chromosome 1, clone RP24-77I21, complete sequence
          Length = 226794

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    ggcctgttcatctctgtccc 454
              ||||||||||||||||||||
Sbjct: 209710 ggcctgttcatctctgtccc 209729
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>ref|XM_393457.2| PREDICTED: Apis mellifera similar to ENSANGP00000004412
           (LOC409968), mRNA
          Length = 4476

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 caatggcatccagatgttgc 242
           ||||||||||||||||||||
Sbjct: 740 caatggcatccagatgttgc 759
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>gb|AC018685.12| Homo sapiens BAC clone RP11-455M16 from 2, complete sequence
          Length = 173381

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    cctgttcatctctgtccctg 456
              ||||||||||||||||||||
Sbjct: 142802 cctgttcatctctgtccctg 142821
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>emb|BX323575.10| Zebrafish DNA sequence from clone CH211-278N20 in linkage group 18,
             complete sequence
          Length = 151144

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   attatctctatcttctattc 139
             ||||||||||||||||||||
Sbjct: 64610 attatctctatcttctattc 64629
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>emb|BX248129.5| Zebrafish DNA sequence from clone CH211-196M16 in linkage group 17,
              complete sequence
          Length = 217707

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      ataatacaatacaacacaat 21
              ||||||||||||||||||||
Sbjct: 175304 ataatacaatacaacacaat 175285
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>dbj|BS000163.1| Pan troglodytes chromosome 22 clone:RP43-010B02, map 22, complete
              sequences
          Length = 182740

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    aaatactcaaaaaaccaaga 352
              ||||||||||||||||||||
Sbjct: 137853 aaatactcaaaaaaccaaga 137872
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>emb|BX640585.2| Pig DNA sequence from clone XX-279G2, complete sequence
          Length = 96095

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aataatacaatacaacacaatata 24
             |||||||||||| |||||||||||
Sbjct: 44763 aataatacaatataacacaatata 44740
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>emb|CT485603.4| RP43-005L22, complete sequence
          Length = 204041

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aatacaatacaacacaatat 23
              ||||||||||||||||||||
Sbjct: 102461 aatacaatacaacacaatat 102480
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>emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in linkage group 8
            Contains part of a novel gene for a protein similar to
            human FLJ12550, the pim1 gene for pim-1 oncogene
            (proviral integration site 1), part of a novel gene for a
            protein similar to vertebrate UDP-galactose transporters,
            a novel gene for a protein similar to vertebrate
            caldesmon 1 (CALD1) and a CpG island, complete sequence
          Length = 140984

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    atacaatacaacacaatata 24
            ||||||||||||||||||||
Sbjct: 1224 atacaatacaacacaatata 1243
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>gb|AY107587.1| Zea mays PCO129703 mRNA sequence
          Length = 508

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 201 gggtagaggcggattatctgtacaatggcatc 232
           |||||| ||| |||||||||||||| ||||||
Sbjct: 494 gggtaggggcagattatctgtacaagggcatc 463
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>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      acaatacaacacaatatacc 26
              ||||||||||||||||||||
Sbjct: 942936 acaatacaacacaatatacc 942955
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>emb|AL935211.7| Zebrafish DNA sequence from clone CH211-227L1, complete sequence
          Length = 152485

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 481   aacagctcctttcaccttttaact 504
             |||||||| |||||||||||||||
Sbjct: 32931 aacagctcttttcaccttttaact 32954
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>emb|BX927393.12| Zebrafish DNA sequence from clone CH211-231B2 in linkage group 1,
             complete sequence
          Length = 152923

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     aataatacaatacaacacaatata 24
             ||||||||||||||| ||||||||
Sbjct: 21279 aataatacaatacaatacaatata 21302
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>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence
          Length = 184821

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     taacaacaacaacactttct 74
              ||||||||||||||||||||
Sbjct: 104019 taacaacaacaacactttct 104000
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>gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complete sequence
          Length = 198621

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    taaatactcaaaaaaccaag 351
              ||||||||||||||||||||
Sbjct: 146680 taaatactcaaaaaaccaag 146699
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>emb|AL807818.14| Zebrafish DNA sequence from clone CH211-225H24, complete sequence
          Length = 194425

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     aataatacaatacaacacaatata 24
             ||||||||||||||| ||||||||
Sbjct: 85516 aataatacaatacaatacaatata 85539
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>emb|CT030126.6| Mouse DNA sequence from clone RP23-430F12 on chromosome 12, complete
              sequence
          Length = 208848

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 305    acataataacaaacaacatatagc 328
              ||||||||| ||||||||||||||
Sbjct: 168910 acataataaaaaacaacatatagc 168933
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>gb|M62985.1|MZESMDPK Maize putative protein kinase mRNA, 3' end
          Length = 1663

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 201  gggtagaggcggattatctgtacaatggcatc 232
            |||||| ||| |||||||||||||| ||||||
Sbjct: 1461 gggtaggggcagattatctgtacaagggcatc 1430


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,684,104
Number of Sequences: 3902068
Number of extensions: 5684104
Number of successful extensions: 145209
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145068
Number of HSP's gapped (non-prelim): 141
length of query: 513
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 490
effective length of database: 17,143,297,704
effective search space: 8400215874960
effective search space used: 8400215874960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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