ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd0a09 |
|---|---|
| Clone Library Name | barley_pub |
>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 212 bits (539), Expect = 6e-55 Identities = 103/111 (92%), Positives = 106/111 (95%) Frame = -2 Query: 514 GKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 335 GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KENVKN SSS Sbjct: 222 GKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTSSS 281 Query: 334 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 182 TG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE Sbjct: 282 TGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332
>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 209 bits (531), Expect = 5e-54 Identities = 100/111 (90%), Positives = 106/111 (95%) Frame = -2 Query: 514 GKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 335 GKPESFSG +LVPSYRGSSFLDPKGRGGS GYDNAVALPAGGRGDEEEL KEN+K+ SSS Sbjct: 219 GKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKDVSSS 278 Query: 334 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 182 TG ITLSVTKSKPETGEVIGVFES+QPSDTDLG+KAPKDVKIQG+WYAQLE Sbjct: 279 TGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329
>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 208 bits (530), Expect = 6e-54 Identities = 101/111 (90%), Positives = 105/111 (94%) Frame = -2 Query: 514 GKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 335 GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KENVKN +S Sbjct: 219 GKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASL 278 Query: 334 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 182 TG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE Sbjct: 279 TGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329
>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 331 Score = 205 bits (522), Expect = 5e-53 Identities = 98/111 (88%), Positives = 104/111 (93%) Frame = -2 Query: 514 GKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 335 GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL+KENVKN ++S Sbjct: 221 GKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKNTAAS 280 Query: 334 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 182 G ITL +TKSKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGVWY Q+E Sbjct: 281 VGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331
>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 Score = 204 bits (520), Expect = 9e-53 Identities = 106/113 (93%), Positives = 107/113 (94%) Frame = -2 Query: 514 GKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 335 GKPESF PFLVPSYRGSSFLDPKGRGGSTGYDNA ALP GGRGDEEELAKENVKNASSS Sbjct: 216 GKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKNASSS 274 Query: 334 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 176 TGNITLSVTKSKPETGEVIGVFESVQPSDTDL +APKDVKIQGVWYAQLESN Sbjct: 275 TGNITLSVTKSKPETGEVIGVFESVQPSDTDL--EAPKDVKIQGVWYAQLESN 325
>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 204 bits (520), Expect = 9e-53 Identities = 100/112 (89%), Positives = 106/112 (94%) Frame = -2 Query: 514 GKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 335 GKP+SFSG FLVPSYRGSSFLDPKGRG STGYDNAVALPAGGRGDEEEL KEN K+A+SS Sbjct: 218 GKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASS 277 Query: 334 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 179 G ITLSVT++KPETGEVIGVFES+QPSDTDLGAKAPKDVKIQGVWYAQLES Sbjct: 278 KGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLES 329
>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 204 bits (518), Expect = 2e-52 Identities = 98/111 (88%), Positives = 103/111 (92%) Frame = -2 Query: 514 GKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 335 GKP+SF+G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KENVKN ++S Sbjct: 222 GKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKNTAAS 281 Query: 334 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 182 G ITL VTKSKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGVWY QLE Sbjct: 282 VGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332
>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 202 bits (515), Expect = 3e-52 Identities = 99/111 (89%), Positives = 103/111 (92%) Frame = -2 Query: 514 GKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 335 GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KEN KN +SS Sbjct: 220 GKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKNVASS 279 Query: 334 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 182 G ITLSVT SKPETGEVIGVF+S+QPSDTDLGAK PKDVKI+GVWYAQLE Sbjct: 280 KGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLE 330
>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 333 Score = 202 bits (514), Expect = 4e-52 Identities = 98/112 (87%), Positives = 103/112 (91%) Frame = -2 Query: 514 GKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 335 GKPESFS FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KENVKN +S Sbjct: 222 GKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASL 281 Query: 334 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 179 TG IT +VTKS P+TGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLES Sbjct: 282 TGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLES 333
>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 291 Score = 153 bits (387), Expect = 2e-37 Identities = 76/111 (68%), Positives = 85/111 (76%) Frame = -2 Query: 514 GKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 335 G + G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPA R D EEL KENVK + Sbjct: 183 GTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKITKAL 240 Query: 334 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 182 G+ SV K P TGE+ GVFES+QPSDTDLGAK PKD+K+ G+WYAQL+ Sbjct: 241 KGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291
>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 293 Score = 150 bits (379), Expect = 2e-36 Identities = 74/110 (67%), Positives = 84/110 (76%) Frame = -2 Query: 514 GKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 335 G ++ G F+VPSYRGSSFLDPKGRGGSTGYDNAVALPA R D EEL KENVK+ + Sbjct: 184 GTLDNIKGDFVVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKSTKAL 241 Query: 334 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 185 G+ SV K TGE+ GVFES+QPSDTDLGAK PKD+KI G+WY QL Sbjct: 242 KGSAVFSVAKVNTATGEIAGVFESIQPSDTDLGAKPPKDIKITGLWYGQL 291
>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 338 Score = 147 bits (370), Expect = 2e-35 Identities = 71/110 (64%), Positives = 83/110 (75%) Frame = -2 Query: 514 GKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 335 G F G F VPSYRG++FLDPKGRGG++GYD AVALPA G D+EE AKEN K+ ++S Sbjct: 227 GDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVALPASG--DDEEYAKENSKSTAAS 284 Query: 334 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 185 G I V K ETGE+ GVFES+QPSDTDLGAK PKD+K GVWYAQ+ Sbjct: 285 VGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334
>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 273 Score = 127 bits (319), Expect = 2e-29 Identities = 62/106 (58%), Positives = 79/106 (74%) Frame = -2 Query: 499 FSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNIT 320 F G F VPSYRG++FLDPKGRG +GYDNAVALPA + D+E+L + NVK A G I+ Sbjct: 170 FEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPA--QADDEDLTRTNVKRAEILNGKIS 227 Query: 319 LSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 182 L + K +GE+ G FES QPSDTDLGA PK+VKI+G++YA++E Sbjct: 228 LQIAKVDSSSGEIAGTFESEQPSDTDLGADEPKEVKIRGIFYARVE 273
>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 275 Score = 123 bits (308), Expect = 3e-28 Identities = 64/105 (60%), Positives = 79/105 (75%) Frame = -2 Query: 499 FSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNIT 320 F G F VPSYRG++FLDPKGRG +TGYDNAVALPA D+E+ A NVK G+I+ Sbjct: 171 FEGDFRVPSYRGATFLDPKGRGLATGYDNAVALPA--TADKEDYA--NVKQTPIGKGSIS 226 Query: 319 LSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 185 L VTK TGE+ GVF+S QPSDTDLGAK P +VKI+G++YA++ Sbjct: 227 LQVTKVDQATGEIAGVFDSEQPSDTDLGAKEPVEVKIRGIFYARV 271
>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 116 bits (290), Expect = 4e-26 Identities = 60/106 (56%), Positives = 76/106 (71%) Frame = -2 Query: 499 FSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNIT 320 F G F VPSYR ++FLDPKGRG ++GYD+A+ALP + EEELA+ NVK S + G I+ Sbjct: 168 FKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQIS 224 Query: 319 LSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 182 L+V K TGE+ G FES Q SD D+GA P +VKIQGV+YA +E Sbjct: 225 LNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270
>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 116 bits (290), Expect = 4e-26 Identities = 60/106 (56%), Positives = 76/106 (71%) Frame = -2 Query: 499 FSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNIT 320 F G F VPSYR ++FLDPKGRG ++GYD+A+ALP + EEELA+ NVK S + G I+ Sbjct: 168 FKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQIS 224 Query: 319 LSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 182 L+V K TGE+ G FES Q SD D+GA P +VKIQGV+YA +E Sbjct: 225 LNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270
>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 277 Score = 112 bits (279), Expect = 8e-25 Identities = 56/104 (53%), Positives = 75/104 (72%) Frame = -2 Query: 493 GPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLS 314 G + VPSYR S+FLDPK RG +TGY++AVA+P+ G D E+L KENVK + G I+L+ Sbjct: 172 GGYRVPSYRTSNFLDPKARGLTTGYESAVAIPSAG--DAEDLTKENVKRFVTGQGEISLA 229 Query: 313 VTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 182 V+K TGEV GVF ++QPSDTD+G K DVK+ G +Y ++E Sbjct: 230 VSKVDGATGEVAGVFTAIQPSDTDMGGKEAVDVKLVGQFYGRIE 273
>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 274 Score = 111 bits (277), Expect = 1e-24 Identities = 55/108 (50%), Positives = 73/108 (67%) Frame = -2 Query: 499 FSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNIT 320 F G F VPSYRG+ FLDPK RG TGYDNAVALP+ + + N K G ++ Sbjct: 171 FVGDFNVPSYRGAGFLDPKARGLYTGYDNAVALPSAA-----DKFRTNKKETPLGKGTLS 225 Query: 319 LSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 176 L VT+ TGE+ G+FES QPSDTDLGAK P DVK++G++Y +++++ Sbjct: 226 LQVTQVDGSTGEIAGIFESEQPSDTDLGAKEPLDVKVRGIFYGRVDTD 273
>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit| of oxygen evolving system of photosystem II) (33 kDa thylakoid membrane protein) (Fragments) Length = 26 Score = 40.4 bits (93), Expect = 0.003 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -2 Query: 445 KGRGGSTGYDNAVALPAGGR 386 + +GGSTGYDNAVALPAGGR Sbjct: 7 QSKGGSTGYDNAVALPAGGR 26
>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 94 Score = 34.3 bits (77), Expect = 0.21 Identities = 23/54 (42%), Positives = 28/54 (51%) Frame = -2 Query: 370 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 209 +AKE K G + SV K KP+TGEVI V E + G K P +VKI Sbjct: 13 VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVKI 60
>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog| Length = 241 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 409 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES-VQPSDTDLGA 233 V A G EEE A+ K G + L T SKP+ EVIG FES VQ GA Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQNDFARAGA 129 Query: 232 KAP 224 AP Sbjct: 130 VAP 132
>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter| protein containing PH domain, PTB domain and leucine zipper motif 2) Length = 662 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -2 Query: 391 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 257 G+ E + +N+KN+ NI T S PET E+I +Q Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449
>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)| Length = 536 Score = 30.4 bits (67), Expect = 3.0 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = -2 Query: 487 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 323 F++ R S L G G + G A L AGGRGD +E+ E KNA + I Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488 Query: 322 TLSVTKSKP 296 T + + P Sbjct: 489 TGHLEEPMP 497
>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)| Length = 560 Score = 30.4 bits (67), Expect = 3.0 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = -2 Query: 487 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 323 F++ R S L G G + G A L AGGRGD +E+ E KNA + I Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488 Query: 322 TLSVTKSKP 296 T + + P Sbjct: 489 TGHLEEPMP 497
>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1) Length = 373 Score = 30.0 bits (66), Expect = 3.9 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -2 Query: 259 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVK--ILIFCACIR 128 QP + KD+K++G W +Q + N S E K ILI C IR Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336
>LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA| Length = 598 Score = 29.6 bits (65), Expect = 5.1 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = +3 Query: 135 HAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVT 314 +A ++ IFT + D W++ ++ + V D TL++ P P+ G V Sbjct: 233 NADRLGIFTPKRVDRDVLGCGEVGWLVCAIKDILGAPVGDTLTLARQPAEKPLPGFKKVK 292 Query: 315 LRV---MLPVEEDAFFTF 359 +V + PV D + F Sbjct: 293 PQVYAGLFPVSSDDYEAF 310
>MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) Length = 373 Score = 29.3 bits (64), Expect = 6.7 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 259 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVKILIFCAC 134 QP + KD+K++G W +Q + N S E K LI C Sbjct: 291 QPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLC 332
>PRDM8_MOUSE (Q8BZ97) PR domain zinc finger protein 8 (PR domain-containing| protein 8) Length = 687 Score = 29.3 bits (64), Expect = 6.7 Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 7/96 (7%) Frame = -2 Query: 469 RGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPET 290 RGS+F GG G A AGG G + A + K+A S S ++ P Sbjct: 460 RGSAFTSVSQLGGGGGAGTAGT--AGGSGGGQTAASDERKSAFSQPAR---SFSQLSPLV 514 Query: 289 -GEVIGVFESVQPSD----TDL--GAKAPKDVKIQG 203 G+ +G E P D T L A P VK+QG Sbjct: 515 LGQKLGALEPCHPGDGVGPTRLYPAAADPLAVKLQG 550
>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)| Length = 644 Score = 29.3 bits (64), Expect = 6.7 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = +3 Query: 75 YTHKHIVASILSSPPTNPRMHAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSD 254 Y H S ++ PP P + Q+M+ TS+ ++ PW +S A+ P + S Sbjct: 474 YQHSTSAGSSVNPPPPPPPLFQQQMTTTTSSA----AASFVEQPWSSSSSRAIQPATTS- 528 Query: 255 GCTLSKTPITSPVSGLL 305 + S + +SP + ++ Sbjct: 529 ASSSSSSSASSPAAAVV 545
>ILVC_HELPJ (Q9ZMA9) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 330 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = -2 Query: 322 TLSVTKSKPETGEVIGVFESVQPSD 248 +LSV+K+K E EV+GV E VQ SD Sbjct: 52 SLSVSKAKKEGFEVLGVKELVQQSD 76
>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi| Length = 700 Score = 28.9 bits (63), Expect = 8.7 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 7/54 (12%) Frame = -2 Query: 466 GSSFLDPKGRGG---STGYDNAVALPAGG----RGDEEELAKENVKNASSSTGN 326 G ++ G GG STG N+ + PAGG G ++ ++ + + SSS+GN Sbjct: 170 GGTYAGNNGAGGNQASTGGSNSTSTPAGGDLAAPGASQKKSQNSNEAGSSSSGN 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,195,610 Number of Sequences: 219361 Number of extensions: 1176291 Number of successful extensions: 4646 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4512 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4634 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
