ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd0a08 |
|---|---|
| Clone Library Name | barley_pub |
>ICP34_HHV1D (P37318) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 252 Score = 40.0 bits (92), Expect = 0.004 Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 4/87 (4%) Frame = +2 Query: 278 LATPPVPMPLLWWSPTPAP*ACSAGYPP----LLLPNWFPKSPEWRASTYRSLREGEDDD 445 + + P P++ +P AP AG PP LLL W + PE DDD Sbjct: 30 VTSTPNSEPVVRSAPAAAPPPPPAGGPPPSCSLLLRQWL-QVPE----------SASDDD 78 Query: 446 ERLQHPEAPPPVPARRGSPCTPARRPR 526 + P++PPP PA P A RPR Sbjct: 79 DDDDWPDSPPPEPAPEARPTAAAPRPR 105
>RL1_HHV11 (O12396) Neurovirulence factor RL1 (Neurovirulence factor ICP34.5)| Length = 248 Score = 38.5 bits (88), Expect = 0.013 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 4/87 (4%) Frame = +2 Query: 278 LATPPVPMPLLWWSPTPAP*ACSAGYPP----LLLPNWFPKSPEWRASTYRSLREGEDDD 445 + + P P + +P AP AG PP LLL W PE DDD Sbjct: 29 VTSTPNSEPAVRSAPAAAPPPPPAGGPPPSCSLLLRQWL-HVPE----------SASDDD 77 Query: 446 ERLQHPEAPPPVPARRGSPCTPARRPR 526 + P++PPP PA P A RPR Sbjct: 78 DDDDWPDSPPPEPAPEARPTAAAPRPR 104
>ICP34_HHV1F (P08353) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 263 Score = 36.2 bits (82), Expect = 0.063 Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 4/87 (4%) Frame = +2 Query: 278 LATPPVPMPLLWWSPTPAP*ACSAGYPP----LLLPNWFPKSPEWRASTYRSLREGEDDD 445 + + P P + +P AP A PP LLL W PE DDD Sbjct: 29 VTSTPNSEPAVRSAPAAAPPPPPASGPPPSCSLLLRQWL-HVPE----------SASDDD 77 Query: 446 ERLQHPEAPPPVPARRGSPCTPARRPR 526 + P++PPP PA P A RPR Sbjct: 78 DDDDWPDSPPPEPAPEARPTAAAPRPR 104
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 35.4 bits (80), Expect = 0.11 Identities = 25/78 (32%), Positives = 31/78 (39%) Frame = +2 Query: 287 PPVPMPLLWWSPTPAP*ACSAGYPPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQHPE 466 PP P P SPTP P + PP +SP R + R + Sbjct: 581 PPPPPPRRRRSPTPPPRRRTPSPPPRR------RSPSPRRYSPPIQRRYSPSPPPKRRTA 634 Query: 467 APPPVPARRGSPCTPARR 520 +PPP P RR SP P +R Sbjct: 635 SPPPPPKRRASPSPPPKR 652 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = +2 Query: 461 PEAPPPVPARRGSPCTPARR 520 P PPP P RR SP P RR Sbjct: 579 PPPPPPPPRRRRSPTPPPRR 598
>ICP34_HHV11 (P36313) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 248 Score = 35.4 bits (80), Expect = 0.11 Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 4/87 (4%) Frame = +2 Query: 278 LATPPVPMPLLWWSPTPAP*ACSAGYPP----LLLPNWFPKSPEWRASTYRSLREGEDDD 445 + + P P + +P AP AG PP LLL W PE DDD Sbjct: 29 VTSTPNSEPAVRSAPAAAPPPPPAGGPPPSCSLLLRQWL-HVPE----------SASDDD 77 Query: 446 ERLQHPEAPPPVPARRGSPCTPARRPR 526 + P++PPP A P A RPR Sbjct: 78 DDDDWPDSPPPESAPEARPTAAAPRPR 104
>ICP34_HHV1N (P37319) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 245 Score = 34.7 bits (78), Expect = 0.18 Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Frame = +2 Query: 338 ACSAGYPP----LLLPNWFPKSPEWRASTYRSLREGEDDDERLQHPEAPPPVPARRGSPC 505 A +AG PP LLL W PE DDD+ P++PPP PA P Sbjct: 43 APAAGGPPPSCSLLLRQWL-HVPE----------SASDDDDDDDWPDSPPPEPAPEARPT 91 Query: 506 TPARRPR 526 A RPR Sbjct: 92 AAAPRPR 98
>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)| (Fragment) Length = 290 Score = 33.9 bits (76), Expect = 0.31 Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 5/103 (4%) Frame = +2 Query: 230 IIHPSLAT---AKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYPPLLLPNWFPKSPEW 400 I+ P +AT A P+ + P VP P TP P PE Sbjct: 196 IVRPPVATSPPAPQEPVPVSSPPRVPTP----PSTPVP------------------LPEK 233 Query: 401 RASTYR--SLREGEDDDERLQHPEAPPPVPARRGSPCTPARRP 523 R S R + R E P APPP P+ +P TP+RRP Sbjct: 234 RRSILREPTFRWTSLTRELPPPPPAPPPAPSPPPAPATPSRRP 276
>LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) Length = 727 Score = 33.1 bits (74), Expect = 0.53 Identities = 36/129 (27%), Positives = 48/129 (37%), Gaps = 6/129 (4%) Frame = +2 Query: 155 HTTYSS-----AL*PYVTQLTQIRTSTVQRIIHPSLATAKSYPI*TLATPPVPMPLLWWS 319 HT+YS A P V IR S Q + P+ + S TP P P ++ Sbjct: 381 HTSYSEGPAAPAPKPRVVTTASIRPSVYQPV--PASTYSPSPGANYSPTPYTPSPAPAYT 438 Query: 320 PTPAP*ACSAGYPPLLLPNWFPK-SPEWRASTYRSLREGEDDDERLQHPEAPPPVPARRG 496 P+PAP Y P +P + P +P + S + P P A G Sbjct: 439 PSPAP-----AYTPSPVPTYTPSPAPAYTPSPAPNYN--------------PAPSVAYSG 479 Query: 497 SPCTPARRP 523 P PA RP Sbjct: 480 GPAEPASRP 488
>3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)| Length = 701 Score = 32.7 bits (73), Expect = 0.69 Identities = 40/133 (30%), Positives = 50/133 (37%), Gaps = 29/133 (21%) Frame = +2 Query: 218 TVQRIIHPSLATAK--SYPI*TLATPPVPMPLLWWSPTPAP*ACSAG--------YPPLL 367 T+Q + LA+ + S + T AT P P P +P PAP SA PP Sbjct: 485 TLQDTVSDRLASEELPSTAVPTPATTPAPAPAP--APAPAPALASAATKERTESEVPPR- 541 Query: 368 LPNWFPKSPEWRASTYRSLREGEDDDERLQHPEAP-------------------PPVPAR 490 P SP+ S + ED R + P AP PP+P Sbjct: 542 -----PASPKVTRSPPETAAPVEDMARRTKRP-APARPTMPPPQVSGSRSSPPAPPLPPG 595 Query: 491 RGSPCTPARRPRR 529 GSP TP PRR Sbjct: 596 SGSPGTPQALPRR 608
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 32.3 bits (72), Expect = 0.90 Identities = 23/77 (29%), Positives = 30/77 (38%) Frame = +2 Query: 290 PVPMPLLWWSPTPAP*ACSAGYPPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQHPEA 469 P P P +PTP P + PP +SP R + R + + Sbjct: 577 PAPPPRRRRTPTPPPRRRTPSPPPRR------RSPSPRRYSPPIQRRYSPSPPPKRRTAS 630 Query: 470 PPPVPARRGSPCTPARR 520 PPP P RR SP P +R Sbjct: 631 PPPPPKRRASPSPPPKR 647 Score = 29.3 bits (64), Expect = 7.7 Identities = 46/186 (24%), Positives = 66/186 (35%), Gaps = 16/186 (8%) Frame = +2 Query: 14 SKXPR*YNMHVRAYVIPGPPKKRREXXXXXXXXXXXXXXLPCHGSTMHTTYSSAL*PYVT 193 S PR Y+ ++ P PP KRR P H+ P Sbjct: 604 SPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHS-------PPPK 656 Query: 194 QLTQIRTSTVQRIIHPSLATAK---SYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYPPL 364 Q R+S V + PSL++ S P + P P SP+P P A PP Sbjct: 657 Q----RSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSPP- 711 Query: 365 LLPNWFPKSPEWRASTYRSLR-----EGEDDDERLQHPEAPPPVPARR--------GSPC 505 + SP+ R S S R + ++++ +P P RR GSP Sbjct: 712 PVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPE 771 Query: 506 TPARRP 523 A++P Sbjct: 772 PAAKKP 777
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 32.3 bits (72), Expect = 0.90 Identities = 23/77 (29%), Positives = 30/77 (38%) Frame = +2 Query: 290 PVPMPLLWWSPTPAP*ACSAGYPPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQHPEA 469 P P P +PTP P + PP +SP R + R + + Sbjct: 563 PAPPPRRRRTPTPPPRRRTPSPPPRR------RSPSPRRYSPPIQRRYSPSPPPKRRTAS 616 Query: 470 PPPVPARRGSPCTPARR 520 PPP P RR SP P +R Sbjct: 617 PPPPPKRRASPSPPPKR 633 Score = 29.6 bits (65), Expect = 5.9 Identities = 45/186 (24%), Positives = 65/186 (34%), Gaps = 16/186 (8%) Frame = +2 Query: 14 SKXPR*YNMHVRAYVIPGPPKKRREXXXXXXXXXXXXXXLPCHGSTMHTTYSSAL*PYVT 193 S PR Y+ ++ P PP KRR P H+ P Sbjct: 590 SPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHS-------PPPK 642 Query: 194 QLTQIRTSTVQRIIHPSLATAK---SYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYPPL 364 Q R+S V + PSL++ S P + P P SP+P P A P Sbjct: 643 Q----RSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPP 698 Query: 365 LLPNWFPKSPEWRASTYRSLR-----EGEDDDERLQHPEAPPPVPARR--------GSPC 505 + SP+ R S S R + ++++ +P P RR GSP Sbjct: 699 PVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPE 758 Query: 506 TPARRP 523 A++P Sbjct: 759 PAAKKP 764
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 2/34 (5%) Frame = +2 Query: 431 GEDDDERLQHPEAPPPVPARRGSP-CTPAR-RPR 526 G+DDD+ L P+A P P+ RG+ TP+R +PR Sbjct: 3116 GDDDDDALHTPKAKPTTPSSRGNDGLTPSREKPR 3149
>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) (Verprolin homology domain-containing protein 2) Length = 498 Score = 32.0 bits (71), Expect = 1.2 Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Frame = +2 Query: 281 ATPPVPMPLLWWSPTPAP*AC-SAGYPPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQ 457 A PP P P++ P P P S G PP P FP P++ A Sbjct: 321 APPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAA----------------- 363 Query: 458 HPEAPPPVPA 487 P PPP PA Sbjct: 364 -PPPPPPPPA 372
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 32.0 bits (71), Expect = 1.2 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Frame = +2 Query: 371 PNWFPKSPEWRASTYRSLREGEDDDERLQHPEAPPPVPARRGSPCTPARR-----PRR 529 P+ P+ + S R R R + +PPP P RR SP P RR PRR Sbjct: 524 PSPSPRKRQKEPSPRRRRRSPSPPPARRRRSPSPPPPPRRRRSPSLPRRRSPSPPPRR 581
>MYCN_SERCA (P26014) N-myc proto-oncogene protein| Length = 427 Score = 31.6 bits (70), Expect = 1.5 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 2/29 (6%) Frame = +2 Query: 446 ERLQH--PEAPPPVPARRGSPCTPARRPR 526 E+LQ+ P APPP P GSP PAR R Sbjct: 144 EKLQNKTPAAPPPPPGTAGSPPVPARSGR 172
>STK39_RAT (O88506) STE20/SPS1-related proline-alanine-rich protein kinase (EC| 2.7.11.1) (Ste-20-related kinase) (Serine/threonine-protein kinase 39) (Pancreatic serine/threonine-protein kinase) (PS/TK) (PSTK1) Length = 553 Score = 31.2 bits (69), Expect = 2.0 Identities = 19/59 (32%), Positives = 24/59 (40%) Frame = +2 Query: 182 PYVTQLTQIRTSTVQRIIHPSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYP 358 P QL Q P+ AT+ P A P P P +P PAP A + G+P Sbjct: 8 PVHVQLPQQAAPVTAAAAAPAAATSAPAPAPAPAAPAAPAPAPAAAPAPAPAAQAVGWP 66
>PCDAB_HUMAN (Q9Y5I1) Protocadherin alpha 11 precursor (PCDH-alpha11)| Length = 949 Score = 30.8 bits (68), Expect = 2.6 Identities = 21/68 (30%), Positives = 25/68 (36%) Frame = +2 Query: 308 LWWSPTPAP*ACSAGYPPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQHPEAPPPVPA 487 LWWS TP AC+ G P L+ W S R +R+ E PP Sbjct: 720 LWWSATPTEGACAPGKPTLVCSR---AVGSWSYSQQRR--------QRVCSEEGPPKTDL 768 Query: 488 RRGSPCTP 511 SP P Sbjct: 769 MAFSPSLP 776
>RIN3_HUMAN (Q8TB24) Ras and Rab interactor 3 (Ras interaction/interference| protein 3) Length = 984 Score = 30.4 bits (67), Expect = 3.4 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 2/104 (1%) Frame = +2 Query: 215 STVQRIIHPSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYPPLLLPNWFPKSP 394 S Q + P+LA A + P+ T +PPVP P + P P PP++ P P Sbjct: 293 SPAQPPVLPALAPAPACPLPT--SPPVPAPHVT-PHAPGP-PDHPNQPPMMTCERLP-CP 347 Query: 395 EWRASTYR--SLREGEDDDERLQHPEAPPPVPARRGSPCTPARR 520 R +++ G Q P PP+PA++ P P RR Sbjct: 348 TAGLGPLREEAMKPGAASSPLQQVPA--PPLPAKKNLPTAPPRR 389
>WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family member 4| (WASP-family protein member 4) Length = 625 Score = 30.4 bits (67), Expect = 3.4 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 3/84 (3%) Frame = +2 Query: 281 ATPPVPMPLLWWSPTPAP*AC-SAGYPPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQ 457 A PP P P++ P P P S G PP FP P++ A D Sbjct: 449 APPPPPPPMIGIPPPPPPIGFGSPGTPPPPSSPSFPPHPDFAAPPPLPPPPAAD------ 502 Query: 458 HPEAPPPVPAR--RGSPCTPARRP 523 +P PPP ++ RG+P P P Sbjct: 503 YPTLPPPPLSQPTRGAPPPPPPPP 526
>IASPP_MOUSE (Q5I1X5) RelA-associated inhibitor (Inhibitor of ASPP protein)| (Protein iASPP) (PPP1R13B-like protein) (NFkB-interacting protein 1) Length = 824 Score = 30.4 bits (67), Expect = 3.4 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 9/75 (12%) Frame = +2 Query: 314 WSPTPAP*ACSAGYPPLL-------LPNWFPK--SPEWRASTYRSLREGEDDDERLQHPE 466 WS +PAP AG P + +P F SP+ A+ R G + HP Sbjct: 50 WSDSPAPPGAQAGVPSRMARYSTSPVPEHFGSRGSPQKIATDGIEARFGRSESAPSLHPY 109 Query: 467 APPPVPARRGSPCTP 511 +P R SP TP Sbjct: 110 SPLSPKGRPSSPRTP 124
>VE4_HPV05 (P06924) Probable protein E4| Length = 245 Score = 30.4 bits (67), Expect = 3.4 Identities = 19/59 (32%), Positives = 23/59 (38%) Frame = +2 Query: 320 PTPAP*ACSAGYPPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQHPEAPPPVPARRG 496 P PAP +G+ P + P+ PE R GE DE P PPP G Sbjct: 151 PPPAPHNGHSGHEPKVQQ---PEGPEGREGHEEGAVGGEGGDEEGHPPPPPPPTNGHEG 206
>IF2_GLOVI (Q7NH85) Translation initiation factor IF-2| Length = 925 Score = 30.4 bits (67), Expect = 3.4 Identities = 27/83 (32%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Frame = +2 Query: 281 ATPPVPMPLLWWSPTPAP*ACSAGYPPLLLPNWFP---KSPEWRASTYRSLREGEDDDER 451 A PP P P +P PAP +A P + P P K A R E + R Sbjct: 197 AAPPEPEP----TPLPAP---AAEAPQPVRPPAPPAPAKPTPAPAPAPRPTAEQPSEPRR 249 Query: 452 LQHPEAPPPVPARRGSPCTPARR 520 Q P PP P +RG P R Sbjct: 250 PQPPAQPPSRPEKRGGPLIAPNR 272
>ARHGF_HUMAN (O94989) Rho guanine nucleotide exchange factor 15 (Vsm-RhoGEF)| Length = 841 Score = 30.0 bits (66), Expect = 4.5 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 9/83 (10%) Frame = +2 Query: 290 PVPM--PLLWWSPTPAP*ACSAGYPPLLLPNWFPK-------SPEWRASTYRSLREGEDD 442 P PM P+ W P ++ PP LLP + SP+ +ST Sbjct: 54 PTPMCTPIFWEPPA------ASLKPPALLPPSASRASLDSQTSPDSPSSTPTPSPVSRRS 107 Query: 443 DERLQHPEAPPPVPARRGSPCTP 511 P +P P P GSPCTP Sbjct: 108 ASPEPAPRSPVPPPKPSGSPCTP 130
>WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region 14 protein (WS| basic-helix-loop-helix leucine zipper protein) (WS-bHLH) (Mlx interactor) (MLX-interacting protein-like) Length = 852 Score = 29.6 bits (65), Expect = 5.9 Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Frame = +2 Query: 278 LATPPVPMPLLWWSPTPAP*ACSAGYPPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQ 457 L PPVP PLL + P A G P P + P +P L+E R Sbjct: 386 LPPPPVPPPLLHYPPP----AKVPGLEPCPPPPFPPMAPPTAL-----LQEEPLFSPRFP 436 Query: 458 HPEAPP-----PVPARRGSPCTPARRP 523 P PP P+PA P TP P Sbjct: 437 FPTVPPAPGVSPLPAPAAFPPTPQSVP 463
>ADA2B_AMBHO (O18935) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)| (Alpha-2B adrenoreceptor) (Fragment) Length = 386 Score = 29.6 bits (65), Expect = 5.9 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = +2 Query: 365 LLPNW--FPKSPEWRASTYRSLREGEDDDERLQHPEAPPPVPARRGSPCTPARRPR 526 L P+W P S + + EDD+E P+A P PA GSP P ++P+ Sbjct: 256 LPPSWPALPNSDQGQKEGVCETSPEEDDEEEECGPQAVPVSPASAGSP--PLQQPQ 309
>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) Length = 497 Score = 29.6 bits (65), Expect = 5.9 Identities = 23/79 (29%), Positives = 28/79 (35%) Frame = +2 Query: 287 PPVPMPLLWWSPTPAP*ACSAGYPPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQHPE 466 PP P P+ P P+ S G PP P FP P++ A P Sbjct: 322 PPPPPPMSVPPPLPSMGFGSPGTPPPPSPPSFPPHPDFAAP-----------------PP 364 Query: 467 APPPVPARRGSPCTPARRP 523 PPP A P P +P Sbjct: 365 PPPPPAADYPMPPPPLSQP 383
>UL34_HCMVA (P16812) Hypothetical protein UL34| Length = 407 Score = 29.3 bits (64), Expect = 7.7 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +2 Query: 428 EGEDDDERLQHPEAPPPVPARRGSPCTPARRPR 526 EGE+DD+ L+H + P P ARRPR Sbjct: 280 EGEEDDDELRHSD---PAPLHESKKPRNARRPR 309
>CD248_MOUSE (Q91V98) Endosialin precursor (Tumor endothelial marker 1) (CD248| antigen) Length = 765 Score = 29.3 bits (64), Expect = 7.7 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 5/67 (7%) Frame = +2 Query: 317 SPTPAP*ACSAGYPPLLLPNWFPKSPEWRASTY-----RSLREGEDDDERLQHPEAPPPV 481 SP P S YP + P+ P SP+ TY L G+ + QHP P Sbjct: 525 SPPYQPPIISTNYPQVFPPHQAPMSPDTHTITYLPPVPPHLDPGDTTSKAHQHPLLPDAP 584 Query: 482 PARRGSP 502 R +P Sbjct: 585 GIRTQAP 591
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 29.3 bits (64), Expect = 7.7 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +2 Query: 239 PSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYPP 361 P L +A + P+ L +P +P P W+ +P P S G PP Sbjct: 908 PVLGSAAASPV-HLKSPSLPAPSPGWTSSPKPPLQSPGIPP 947
>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)| Length = 1426 Score = 29.3 bits (64), Expect = 7.7 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +2 Query: 239 PSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYPP 361 P L +A + P+ L +P +P P W+ +P P S G PP Sbjct: 909 PVLGSAAASPV-HLKSPSLPAPSPGWTSSPKPPLQSPGIPP 948
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 29.3 bits (64), Expect = 7.7 Identities = 24/101 (23%), Positives = 35/101 (34%), Gaps = 3/101 (2%) Frame = +2 Query: 230 IIHPSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGY---PPLLLPNWFPKSPEW 400 I+HP + P + +PP+ P + TP P S PP++ P + P P Sbjct: 163 IVHPPVTPKPPSPTPPIVSPPIVYPPI----TPTPPVVSPPIIPTPPIVSPPFVPNPPVV 218 Query: 401 RASTYRSLREGEDDDERLQHPEAPPPVPARRGSPCTPARRP 523 Y P PP+ +PC P P Sbjct: 219 IPPPYVP-----------SPPVVTPPIVPTPPTPCPPPPPP 248
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 29.3 bits (64), Expect = 7.7 Identities = 30/102 (29%), Positives = 37/102 (36%), Gaps = 4/102 (3%) Frame = +2 Query: 236 HPSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYPPLLLP----NWFPKSPEWR 403 HP + SY T P P L P P P PP LP + P SP+ + Sbjct: 2090 HPDIFRPGSY------TDPYAQPPLTPRPQPPPPESCCALPPRSLPSDPFSRVPVSPQSQ 2143 Query: 404 ASTYRSLREGEDDDERLQHPEAPPPVPARRGSPCTPARRPRR 529 +S+ L E P PV R SP +R P R Sbjct: 2144 SSSQSPLTPRPLSAEAF----CPSPVTPRFQSPDPYSRPPSR 2181
>GIC2_YEAST (Q06648) GTPase-interacting component 2| Length = 383 Score = 29.3 bits (64), Expect = 7.7 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 7/61 (11%) Frame = +2 Query: 353 YPPLL----LPNWFPKSPEWRASTYRSLRE---GEDDDERLQHPEAPPPVPARRGSPCTP 511 +P LL + ++ P+S R+S YRSL E D + P P+P RR S TP Sbjct: 292 FPTLLEDKPILDFLPRSQ--RSSAYRSLLETPNSNKDSAKAFFPSRQSPLPKRRNSIATP 349 Query: 512 A 514 + Sbjct: 350 S 350
>TOP2_BOMMO (O16140) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| (TOPOII) Length = 1547 Score = 29.3 bits (64), Expect = 7.7 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +2 Query: 350 GYPPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQHPEAPPPVPARRGSPCTP 511 GY P + +W + RAS + L EDDD + E P P P +G P P Sbjct: 1087 GYAPDPIADW-----KKRASKIQGLTALEDDDAQESEEEEPEPDP--KGKPVDP 1133
>FOG1_MOUSE (O35615) Zinc finger protein ZFPM1 (Zinc finger protein multitype| 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1) Length = 995 Score = 28.9 bits (63), Expect = 10.0 Identities = 21/67 (31%), Positives = 27/67 (40%) Frame = +2 Query: 287 PPVPMPLLWWSPTPAP*ACSAGYPPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQHPE 466 P VP P +P P + SAG P L P+ P P + R Q P+ Sbjct: 776 PVVPSPTAELPSSPRPGSASAGPAPALSPSPVPDGPIDLSKR-----------PRRQSPD 824 Query: 467 APPPVPA 487 AP +PA Sbjct: 825 APTALPA 831
>V70K_TYMVA (P20131) 69 kDa protein| Length = 628 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +2 Query: 464 EAPPPVPARRGSPCTPARRPRR 529 E PPP P R SP TP + P R Sbjct: 433 EGPPPPPRRLPSPATPPQSPLR 454
>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) (Protein oracle) Length = 723 Score = 28.9 bits (63), Expect = 10.0 Identities = 35/129 (27%), Positives = 47/129 (36%), Gaps = 6/129 (4%) Frame = +2 Query: 155 HTTYSS-----AL*PYVTQLTQIRTSTVQRIIHPSLATAKSYPI*TLATPPVPMPLLWWS 319 HT+YS A P V IR S Q + P+ + + S TP P P ++ Sbjct: 377 HTSYSEGPAAPAPKPRVVTTASIRPSVYQPV--PASSYSPSPGANYSPTPYTPSPAPAYT 434 Query: 320 PTPAP*ACSAGYPPLLLPNWFPK-SPEWRASTYRSLREGEDDDERLQHPEAPPPVPARRG 496 P+PAP Y P P + P +P + S + P P A G Sbjct: 435 PSPAP-----TYTPSPAPTYSPSPAPAYTPSPAPNY--------------TPTPSAAYSG 475 Query: 497 SPCTPARRP 523 P A RP Sbjct: 476 GPSESASRP 484
>RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1887 Score = 28.9 bits (63), Expect = 10.0 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Frame = +2 Query: 314 WSPT-PAP*ACSAGYPPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQH----PEAPPP 478 +SPT P+ S Y P+ P++ P SP + AS S +++ P PP Sbjct: 1706 YSPTSPSYSPTSPNYTPVT-PSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPP 1764 Query: 479 VPARRGSPCTPARRP 523 P+ GSP +P P Sbjct: 1765 SPSYDGSPGSPQYTP 1779
>CSDC2_HUMAN (Q9Y534) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 153 Score = 28.9 bits (63), Expect = 10.0 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = +2 Query: 356 PPLLLPNWFPKSPEWRASTYRSLREGEDDDERLQHP--EAPPPVPARR 493 PP++ P PKSP W T+ REG ER P + P P+P +R Sbjct: 8 PPVVPPLHSPKSPVW--PTFPFHREGSRVWERGGVPPRDLPSPLPTKR 53
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3| homolog (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 4/34 (11%) Frame = +2 Query: 437 DDDERLQHPEAPPPVPARRGSPC-TPA---RRPR 526 ++D+ ++ P+ PPP P G+P +PA +RPR Sbjct: 4 EEDKSVEQPQPPPPPPEEPGAPAPSPAAADKRPR 37 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,025,958 Number of Sequences: 219361 Number of extensions: 1504921 Number of successful extensions: 6078 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 5187 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5975 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
