ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd0a06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TLC1_ARATH (Q39002) Chloroplast ADP,ATP carrier protein 1, chlor... 30 5.9

>TLC1_ARATH (Q39002) Chloroplast ADP,ATP carrier protein 1, chloroplast|
           precursor (ADP/ATP translocase 1) (Adenine nucleotide
           translocase 1)
          Length = 624

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 285 LATSLRTVLQLRFMLPLAVARPWATCL 205
           LA  L T L  RFM P+A+ R W+ CL
Sbjct: 214 LADKLLTTLGPRFMGPIAILRIWSFCL 240


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,903,034
Number of Sequences: 219361
Number of extensions: 1182927
Number of successful extensions: 3141
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3136
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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