ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd0a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
2dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
3dbj|AK120683.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
4dbj|AK072668.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
5gb|AC087370.26| Homo sapiens chromosome 8, clone RP11-533K17, co... 44 0.48
6dbj|AP004582.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 44 0.48
7gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section ... 42 1.9
8ref|NM_184944.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.5
9gb|AY028371.1| Bacteroides fragilis ferritin A (ftnA) gene, comp... 40 7.5
10gb|AC127227.3| Mus musculus BAC clone RP24-505M10 from chromosom... 40 7.5
11ref|XM_001002664.1| PREDICTED: Mus musculus similar to serine/th... 40 7.5
12ref|XM_001006811.1| PREDICTED: Mus musculus similar to serine/th... 40 7.5
13ref|XM_001006785.1| PREDICTED: Mus musculus similar to Ser/Thr p... 40 7.5
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.5
15gb|AC151988.3| Mus musculus BAC clone RP23-362F11 from chromosom... 40 7.5
16gb|AC154905.5| Mus musculus BAC clone RP23-369A18 from chromosom... 40 7.5
17ref|XM_894927.2| PREDICTED: Mus musculus similar to serine/threo... 40 7.5
18ref|XM_902140.2| PREDICTED: Mus musculus similar to serine/threo... 40 7.5
19ref|XM_993352.1| PREDICTED: Mus musculus similar to serine/threo... 40 7.5
20ref|XM_896550.2| PREDICTED: Mus musculus similar to serine/threo... 40 7.5
21gb|AC112149.4| Mus musculus BAC clone RP23-186F18 from chromosom... 40 7.5
22ref|XM_662267.1| Cryptosporidium hominis TU502 hypothetical prot... 40 7.5
23gb|AC099525.5| Papio anubis clone RP41-277O17, complete sequence 40 7.5
24emb|AL020991.1|HS884M20 Human DNA sequence from clone RP5-884M20... 40 7.5
25emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 7.5
26emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4,... 40 7.5
27emb|BX072554.8| Zebrafish DNA sequence from clone DKEY-61M24 in ... 40 7.5
28gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 7.5
29dbj|AK139578.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 40 7.5
30gb|AC150900.5| Mus musculus BAC clone RP23-145O23 from chromosom... 40 7.5
31gb|AC011712.6|AC011712 Homo sapiens chromosome 18, clone RP11-18... 40 7.5
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
33dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
35gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 genom... 40 7.5
36ref|NM_001037248.1| Mus musculus similar to Ser/Thr protein kina... 40 7.5
37gb|AC117440.5| Homo sapiens 3 BAC RP11-575C1 (Roswell Park Cance... 40 7.5
38gb|AC122918.4| Mus musculus chromosome 6 clone RP23-29F15, compl... 40 7.5
39dbj|AP005852.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
40dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 7.5
41gb|AC153981.5| Mus musculus 10 BAC RP24-112H16 (Roswell Park Can... 40 7.5
42emb|BX294661.14| Zebrafish DNA sequence from clone CH211-199I18 ... 40 7.5
43emb|Z83821.1|HS296K21 Human DNA sequence from clone RP1-296K21 o... 40 7.5
44emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.5
45gb|AC157592.6| Mus musculus BAC clone RP23-331M13 from chromosom... 40 7.5
46emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4,... 40 7.5
47gb|AC171682.2| Mus musculus BAC clone RP24-101E7 from chromosome... 40 7.5
48gb|AC168854.4| Mus musculus BAC clone RP23-170J16 from chromosom... 40 7.5
49gb|AC121834.4| Mus musculus BAC clone RP24-72F20 from chromosome... 40 7.5
50gb|AC164312.3| Mus musculus BAC clone RP23-88M21 from chromosome... 40 7.5 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                            
Query: 355      tcgtcatcttcgacaacctgagcactactggatgcatcacatttttcctttgtttccaac 414
                ||||||||||||||||| |||||||||||||||||||| || || |||||    || || 
Sbjct: 23786079 tcgtcatcttcgacaacttgagcactactggatgcatcgcaattctccttcaactctaaa 23786020

                                                  
Query: 415      agttcatccagtttgcgcttcatcccaggtttag 448
                |  |||||||| ||||||||||| ||||||||||
Sbjct: 23786019 acctcatccagcttgcgcttcattccaggtttag 23785986



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 82/96 (85%), Gaps = 5/96 (5%)
 Strand = Plus / Minus

                                                                            
Query: 45       ccttagagctgactgtcagcagggcattagtttctcctgtgtctacaaactcaactacaa 104
                ||||| |||||||||||||||||||||||||  |||||||| ||  ||||    ||||||
Sbjct: 23786380 ccttacagctgactgtcagcagggcattagtcactcctgtgcct--aaac---gctacaa 23786326

                                                    
Query: 105      attacattcctaaggcgcggtatctaaagcaaaaaa 140
                ||||||||||||| |  | |||||||||||||||||
Sbjct: 23786325 attacattcctaaagtaccgtatctaaagcaaaaaa 23786290



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                          
Query: 204      taagtcaccaaagatgctacgttggaacaatgagttagccat 245
                ||||| || ||||||| ||||||||||||||| |||||||||
Sbjct: 23786236 taagttacaaaagatgttacgttggaacaatgtgttagccat 23786195



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                            
Query: 487      gatgaagaagctgccgatttgttttccccattactattaatctgcttctccaccggagca 546
                |||||||||||  |||| | |||| ||||||||||  |||  ||||||||||| ||||||
Sbjct: 23785944 gatgaagaagcaaccgactggtttcccccattactcgtaacttgcttctccactggagca 23785885

                    
Query: 547      gacc 550
                ||||
Sbjct: 23785884 gacc 23785881
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>dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1113_E01
          Length = 73706

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                         
Query: 355   tcgtcatcttcgacaacctgagcactactggatgcatcacatttttcctttgtttccaac 414
             ||||||||||||||||| |||||||||||||||||||| || || |||||    || || 
Sbjct: 41009 tcgtcatcttcgacaacttgagcactactggatgcatcgcaattctccttcaactctaaa 40950

                                               
Query: 415   agttcatccagtttgcgcttcatcccaggtttag 448
             |  |||||||| ||||||||||| ||||||||||
Sbjct: 40949 acctcatccagcttgcgcttcattccaggtttag 40916



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 82/96 (85%), Gaps = 5/96 (5%)
 Strand = Plus / Minus

                                                                         
Query: 45    ccttagagctgactgtcagcagggcattagtttctcctgtgtctacaaactcaactacaa 104
             ||||| |||||||||||||||||||||||||  |||||||| ||  ||||    ||||||
Sbjct: 41310 ccttacagctgactgtcagcagggcattagtcactcctgtgcct--aaac---gctacaa 41256

                                                 
Query: 105   attacattcctaaggcgcggtatctaaagcaaaaaa 140
             ||||||||||||| |  | |||||||||||||||||
Sbjct: 41255 attacattcctaaagtaccgtatctaaagcaaaaaa 41220



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 204   taagtcaccaaagatgctacgttggaacaatgagttagccat 245
             ||||| || ||||||| ||||||||||||||| |||||||||
Sbjct: 41166 taagttacaaaagatgttacgttggaacaatgtgttagccat 41125



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                         
Query: 487   gatgaagaagctgccgatttgttttccccattactattaatctgcttctccaccggagca 546
             |||||||||||  |||| | |||| ||||||||||  |||  ||||||||||| ||||||
Sbjct: 40874 gatgaagaagcaaccgactggtttcccccattactcgtaacttgcttctccactggagca 40815

                 
Query: 547   gacc 550
             ||||
Sbjct: 40814 gacc 40811
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>dbj|AK120683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164A10, full
            insert sequence
          Length = 2575

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                        
Query: 355  tcgtcatcttcgacaacctgagcactactggatgcatcacatttttcctttgtttccaac 414
            ||||||||||||||||| |||||||||||||||||||| || || |||||    || || 
Sbjct: 2132 tcgtcatcttcgacaacttgagcactactggatgcatcgcaattctccttcaactctaaa 2073

                                              
Query: 415  agttcatccagtttgcgcttcatcccaggtttag 448
            |  |||||||| ||||||||||| ||||||||||
Sbjct: 2072 acctcatccagcttgcgcttcattccaggtttag 2039



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 82/96 (85%), Gaps = 5/96 (5%)
 Strand = Plus / Minus

                                                                        
Query: 45   ccttagagctgactgtcagcagggcattagtttctcctgtgtctacaaactcaactacaa 104
            ||||| |||||||||||||||||||||||||  |||||||| ||  ||||    ||||||
Sbjct: 2433 ccttacagctgactgtcagcagggcattagtcactcctgtgcct--aaac---gctacaa 2379

                                                
Query: 105  attacattcctaaggcgcggtatctaaagcaaaaaa 140
            ||||||||||||| |  | |||||||||||||||||
Sbjct: 2378 attacattcctaaagtaccgtatctaaagcaaaaaa 2343



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 204  taagtcaccaaagatgctacgttggaacaatgagttagccat 245
            ||||| || ||||||| ||||||||||||||| |||||||||
Sbjct: 2289 taagttacaaaagatgttacgttggaacaatgtgttagccat 2248



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                        
Query: 487  gatgaagaagctgccgatttgttttccccattactattaatctgcttctccaccggagca 546
            |||||||||||  |||| | |||| ||||||||||  |||  ||||||||||| ||||||
Sbjct: 1997 gatgaagaagcaaccgactggtttcccccattactcgtaacttgcttctccactggagca 1938

                
Query: 547  gacc 550
            ||||
Sbjct: 1937 gacc 1934
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>dbj|AK072668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134N17, full
            insert sequence
          Length = 3380

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                        
Query: 355  tcgtcatcttcgacaacctgagcactactggatgcatcacatttttcctttgtttccaac 414
            ||||||||||||||||| |||||||||||||||||||| || || |||||    || || 
Sbjct: 3015 tcgtcatcttcgacaacttgagcactactggatgcatcgcaattctccttcaactctaaa 2956

                                              
Query: 415  agttcatccagtttgcgcttcatcccaggtttag 448
            |  |||||||| ||||||||||| ||||||||||
Sbjct: 2955 acctcatccagcttgcgcttcattccaggtttag 2922



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 82/96 (85%), Gaps = 5/96 (5%)
 Strand = Plus / Minus

                                                                        
Query: 45   ccttagagctgactgtcagcagggcattagtttctcctgtgtctacaaactcaactacaa 104
            ||||| |||||||||||||||||||||||||  |||||||| ||  ||||    ||||||
Sbjct: 3316 ccttacagctgactgtcagcagggcattagtcactcctgtgcct--aaac---gctacaa 3262

                                                
Query: 105  attacattcctaaggcgcggtatctaaagcaaaaaa 140
            ||||||||||||| |  | |||||||||||||||||
Sbjct: 3261 attacattcctaaagtaccgtatctaaagcaaaaaa 3226



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 204  taagtcaccaaagatgctacgttggaacaatgagttagccat 245
            ||||| || ||||||| ||||||||||||||| |||||||||
Sbjct: 3172 taagttacaaaagatgttacgttggaacaatgtgttagccat 3131



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                        
Query: 487  gatgaagaagctgccgatttgttttccccattactattaatctgcttctccaccggagca 546
            |||||||||||  |||| | |||| ||||||||||  |||  ||||||||||| ||||||
Sbjct: 2880 gatgaagaagcaaccgactggtttcccccattactcgtaacttgcttctccactggagca 2821

                
Query: 547  gacc 550
            ||||
Sbjct: 2820 gacc 2817
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>gb|AC087370.26| Homo sapiens chromosome 8, clone RP11-533K17, complete sequence
          Length = 53432

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 504   tttgttttccccattactatta 525
             ||||||||||||||||||||||
Sbjct: 38744 tttgttttccccattactatta 38723
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>dbj|AP004582.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB925E9
          Length = 93034

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 504   tttgttttccccattactatta 525
             ||||||||||||||||||||||
Sbjct: 21602 tttgttttccccattactatta 21623
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>gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section 7 of 9 of the complete
              sequence
          Length = 250713

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 162    gatattctcaatatcatcatc 182
              |||||||||||||||||||||
Sbjct: 130748 gatattctcaatatcatcatc 130728
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>ref|NM_184944.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2677

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 474 ggcatgcacactggatgaag 493
           ||||||||||||||||||||
Sbjct: 869 ggcatgcacactggatgaag 888
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>gb|AY028371.1| Bacteroides fragilis ferritin A (ftnA) gene, complete cds
          Length = 740

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 478 tgcacactggatgaagaagc 497
           ||||||||||||||||||||
Sbjct: 253 tgcacactggatgaagaagc 272
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>gb|AC127227.3| Mus musculus BAC clone RP24-505M10 from chromosome 7, complete sequence
          Length = 151643

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 158    cattgatattctcaatatcatcat 181
              |||||||||||||||| |||||||
Sbjct: 100180 cattgatattctcaatgtcatcat 100203
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>ref|XM_001002664.1| PREDICTED: Mus musculus similar to serine/threonine kinase
           (LOC620736), mRNA
          Length = 906

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 158 cattgatattctcaatatcatcat 181
           |||||||||||||||| |||||||
Sbjct: 735 cattgatattctcaatgtcatcat 758
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>ref|XM_001006811.1| PREDICTED: Mus musculus similar to serine/threonine kinase
           (LOC673979), mRNA
          Length = 510

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 158 cattgatattctcaatatcatcat 181
           |||||||||||||||| |||||||
Sbjct: 339 cattgatattctcaatgtcatcat 362
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>ref|XM_001006785.1| PREDICTED: Mus musculus similar to Ser/Thr protein kinase PAR-1A
           (LOC381936), mRNA
          Length = 1313

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 158 cattgatattctcaatatcatcat 181
           |||||||||||||||| |||||||
Sbjct: 735 cattgatattctcaatgtcatcat 758
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 474      ggcatgcacactggatgaag 493
                ||||||||||||||||||||
Sbjct: 18418254 ggcatgcacactggatgaag 18418235
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>gb|AC151988.3| Mus musculus BAC clone RP23-362F11 from chromosome 7, complete sequence
          Length = 196173

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 158    cattgatattctcaatatcatcat 181
              |||||||||||||||| |||||||
Sbjct: 143571 cattgatattctcaatgtcatcat 143548
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>gb|AC154905.5| Mus musculus BAC clone RP23-369A18 from chromosome 7, complete sequence
          Length = 213905

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 158    cattgatattctcaatatcatcat 181
              |||||||||||||||| |||||||
Sbjct: 202422 cattgatattctcaatgtcatcat 202445
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>ref|XM_894927.2| PREDICTED: Mus musculus similar to serine/threonine kinase,
            transcript variant 1 (LOC628664), mRNA
          Length = 2344

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 158  cattgatattctcaatatcatcat 181
            |||||||||||||||| |||||||
Sbjct: 1016 cattgatattctcaatgtcatcat 1039
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>ref|XM_902140.2| PREDICTED: Mus musculus similar to serine/threonine kinase,
            transcript variant 2 (LOC628664), mRNA
          Length = 1724

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 158  cattgatattctcaatatcatcat 181
            |||||||||||||||| |||||||
Sbjct: 1146 cattgatattctcaatgtcatcat 1169
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>ref|XM_993352.1| PREDICTED: Mus musculus similar to serine/threonine kinase,
            transcript variant 3 (LOC620736), mRNA
          Length = 2344

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 158  cattgatattctcaatatcatcat 181
            |||||||||||||||| |||||||
Sbjct: 1016 cattgatattctcaatgtcatcat 1039
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>ref|XM_896550.2| PREDICTED: Mus musculus similar to serine/threonine kinase,
            transcript variant 2 (LOC620736), mRNA
          Length = 1724

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 158  cattgatattctcaatatcatcat 181
            |||||||||||||||| |||||||
Sbjct: 1146 cattgatattctcaatgtcatcat 1169
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>gb|AC112149.4| Mus musculus BAC clone RP23-186F18 from chromosome 10, complete sequence
          Length = 195384

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 154    tagtcattgatattctcaatatca 177
              |||||||||| |||||||||||||
Sbjct: 159070 tagtcattgaaattctcaatatca 159093
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>ref|XM_662267.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.30088)
            partial mRNA
          Length = 1749

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  atattctcaatatcatcatc 182
            ||||||||||||||||||||
Sbjct: 1003 atattctcaatatcatcatc 1022
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>gb|AC099525.5| Papio anubis clone RP41-277O17, complete sequence
          Length = 163567

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   atcaccacatagataagtca 210
             ||||||||||||||||||||
Sbjct: 12124 atcaccacatagataagtca 12143
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>emb|AL020991.1|HS884M20 Human DNA sequence from clone RP5-884M20 on chromosome Xp11.21 Contains
             the ALAS2 gene for aminolevulinate, delta-, synthase 2
             (sideroblastic/hypochromic anemia), the APEX2 gene for
             APEX nuclease (apurinic/apyrimidinic endonuclease) 2, the
             5' end of the PFKFB1 gene for
             6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 and
             a CpG island, complete sequence
          Length = 114173

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    aaactcaactacaaattaca 110
             ||||||||||||||||||||
Sbjct: 83700 aaactcaactacaaattaca 83681
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 478     tgcacactggatgaagaagc 497
               ||||||||||||||||||||
Sbjct: 3347884 tgcacactggatgaagaagc 3347865
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>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09,
             complete sequence
          Length = 96079

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 474   ggcatgcacactggatgaag 493
             ||||||||||||||||||||
Sbjct: 81619 ggcatgcacactggatgaag 81638
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>emb|BX072554.8| Zebrafish DNA sequence from clone DKEY-61M24 in linkage group 7,
             complete sequence
          Length = 190879

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   catttttcctttgtttccaa 413
             ||||||||||||||||||||
Sbjct: 72483 catttttcctttgtttccaa 72464
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 393     acatttttcctttgtttcca 412
               ||||||||||||||||||||
Sbjct: 1656098 acatttttcctttgtttcca 1656079
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>dbj|AK139578.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
            clone:B020005H17 product:weakly similar to Hypothetical
            tyrosine protein kinase/serine/threonine protein
            kinase/eukaryotic protein kinase containing protein [Mus
            musculus], full insert sequence
          Length = 1582

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 158  cattgatattctcaatatcatcat 181
            |||||||||||||||| |||||||
Sbjct: 1017 cattgatattctcaatgtcatcat 1040
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>gb|AC150900.5| Mus musculus BAC clone RP23-145O23 from chromosome 7, complete sequence
          Length = 211722

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 158    cattgatattctcaatatcatcat 181
              |||||||||||||||| |||||||
Sbjct: 115662 cattgatattctcaatgtcatcat 115639
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>gb|AC011712.6|AC011712 Homo sapiens chromosome 18, clone RP11-188I24, complete sequence
          Length = 145165

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   tcaccacatagataagtcac 211
             ||||||||||||||||||||
Sbjct: 45944 tcaccacatagataagtcac 45925
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 474      ggcatgcacactggatgaag 493
                ||||||||||||||||||||
Sbjct: 20978387 ggcatgcacactggatgaag 20978406
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 474      ggcatgcacactggatgaag 493
                ||||||||||||||||||||
Sbjct: 11628118 ggcatgcacactggatgaag 11628099
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 474      ggcatgcacactggatgaag 493
                ||||||||||||||||||||
Sbjct: 18412295 ggcatgcacactggatgaag 18412276
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>gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 genomic sequence, complete
             sequence
          Length = 90673

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 474   ggcatgcacactggatgaag 493
             ||||||||||||||||||||
Sbjct: 62961 ggcatgcacactggatgaag 62980
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>ref|NM_001037248.1| Mus musculus similar to Ser/Thr protein kinase PAR-1A (LOC381936),
            mRNA
          Length = 1582

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 158  cattgatattctcaatatcatcat 181
            |||||||||||||||| |||||||
Sbjct: 1017 cattgatattctcaatgtcatcat 1040
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>gb|AC117440.5| Homo sapiens 3 BAC RP11-575C1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 199386

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    ctggatgcatcacatttttc 401
              ||||||||||||||||||||
Sbjct: 109322 ctggatgcatcacatttttc 109341
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>gb|AC122918.4| Mus musculus chromosome 6 clone RP23-29F15, complete sequence
          Length = 210315

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 28    gagaaacacaatttcacccttagagctg 55
             |||||||||||||||| ||| |||||||
Sbjct: 77611 gagaaacacaatttcaacctcagagctg 77638
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>dbj|AP005852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0414E10
          Length = 141760

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 474    ggcatgcacactggatgaag 493
              ||||||||||||||||||||
Sbjct: 106004 ggcatgcacactggatgaag 105985
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 478     tgcacactggatgaagaagc 497
               ||||||||||||||||||||
Sbjct: 3446478 tgcacactggatgaagaagc 3446459
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>gb|AC153981.5| Mus musculus 10 BAC RP24-112H16 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 177129

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 154  tagtcattgatattctcaatatca 177
            |||||||||| |||||||||||||
Sbjct: 6473 tagtcattgaaattctcaatatca 6496
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>emb|BX294661.14| Zebrafish DNA sequence from clone CH211-199I18 in linkage group 20,
              complete sequence
          Length = 197237

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    aaagcaaaaaatatgtccca 149
              ||||||||||||||||||||
Sbjct: 128780 aaagcaaaaaatatgtccca 128799
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>emb|Z83821.1|HS296K21 Human DNA sequence from clone RP1-296K21 on chromosome Xq13, complete
             sequence
          Length = 111994

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    aaactcaactacaaattaca 110
             ||||||||||||||||||||
Sbjct: 82195 aaactcaactacaaattaca 82176
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 483     actggatgaagaagctgccg 502
               ||||||||||||||||||||
Sbjct: 2512711 actggatgaagaagctgccg 2512692
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>gb|AC157592.6| Mus musculus BAC clone RP23-331M13 from chromosome 7, complete sequence
          Length = 220809

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 158   cattgatattctcaatatcatcat 181
             |||||||||||||||| |||||||
Sbjct: 30167 cattgatattctcaatgtcatcat 30144
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>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04,
             complete sequence
          Length = 140890

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 474   ggcatgcacactggatgaag 493
             ||||||||||||||||||||
Sbjct: 23793 ggcatgcacactggatgaag 23812
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>gb|AC171682.2| Mus musculus BAC clone RP24-101E7 from chromosome 7, complete sequence
          Length = 228837

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 158   cattgatattctcaatatcatcat 181
             |||||||||||||||| |||||||
Sbjct: 95630 cattgatattctcaatgtcatcat 95607
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>gb|AC168854.4| Mus musculus BAC clone RP23-170J16 from chromosome 7, complete sequence
          Length = 226303

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 158    cattgatattctcaatatcatcat 181
              |||||||||||||||| |||||||
Sbjct: 190358 cattgatattctcaatgtcatcat 190335
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>gb|AC121834.4| Mus musculus BAC clone RP24-72F20 from chromosome 5, complete sequence
          Length = 226382

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   atatcatcatcagcctagca 191
             ||||||||||||||||||||
Sbjct: 50009 atatcatcatcagcctagca 50028
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>gb|AC164312.3| Mus musculus BAC clone RP23-88M21 from chromosome 7, complete sequence
          Length = 223232

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 158   cattgatattctcaatatcatcat 181
             |||||||||||||||| |||||||
Sbjct: 52039 cattgatattctcaatgtcatcat 52062


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,284,282
Number of Sequences: 3902068
Number of extensions: 5284282
Number of successful extensions: 112572
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112227
Number of HSP's gapped (non-prelim): 345
length of query: 550
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 527
effective length of database: 17,143,297,704
effective search space: 9034517890008
effective search space used: 9034517890008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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