Clone Name | rbaak4o23 |
---|---|
Clone Library Name | barley_pub |
>CAX1C_ORYSA (Q5KTQ9) Vacuolar cation/proton exchanger 1c (Ca(2+)/H(+) exchanger| 1c) (OsCAX1c) Length = 450 Score = 42.7 bits (99), Expect = 8e-04 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 2/123 (1%) Frame = -3 Query: 589 AKAVGYLLLGATICAAFADPLVDAVHNFSNATHIPSFFVSFIGLPLATNSSEAVSAIIFA 410 A A+ +L+ A + A + +V + S + IP F+S I LP+ N++E AIIFA Sbjct: 292 ASAMVWLIGMAVVTAMLSSYVVTTIEEASESMGIPVRFISIILLPIVGNAAEHAGAIIFA 351 Query: 409 SRKKQRTCSLTFSEVYGGVTMNNTLCLGVFLALIYFRELTWDFSSEVLVI--LLACVIMG 236 + K ++ G T + L + V L + + + D +L L VI Sbjct: 352 FKNK---IDISLGITLGSATQISMLVVPVILIVSWVNAIPMDLDFNLLETGSLAMAVITT 408 Query: 235 LFT 227 FT Sbjct: 409 AFT 411
>CAX1A_ORYSA (Q769E5) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger| 1a) (OsCAX1a) Length = 451 Score = 40.8 bits (94), Expect = 0.003 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 2/130 (1%) Frame = -3 Query: 610 ENPGWCIAKAVGYLLLGATICAAFADPLVDAVHNFSNATHIPSFFVSFIGLPLATNSSEA 431 E P A A+ +L L + + ++ +V + S + + F+S I LP+ N++E Sbjct: 271 EEPALGFASALFWLALMTAVISVLSEYVVGTIEPTSQSWGLSVSFISIILLPIVGNAAEH 330 Query: 430 VSAIIFASRKKQRTCSLTFSEVYGGVTMNN--TLCLGVFLALIYFRELTWDFSSEVLVIL 257 AIIFA + K +T G T + + L V +A I ++ DF L Sbjct: 331 AGAIIFALKNK---LDITLGVALGSATQISMFVVPLSVLVAWIMGVQMDLDFKLLETGSL 387 Query: 256 LACVIMGLFT 227 V++ FT Sbjct: 388 FMAVLVTAFT 397
>CAX3_ORYSA (Q6K1C4) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger| 3) (OsCAX3) Length = 417 Score = 39.3 bits (90), Expect = 0.009 Identities = 19/63 (30%), Positives = 39/63 (61%) Frame = -3 Query: 586 KAVGYLLLGATICAAFADPLVDAVHNFSNATHIPSFFVSFIGLPLATNSSEAVSAIIFAS 407 +++ +L + + ++ LV+A+ S++ ++P F+S I LP+ N++E SAI+FA Sbjct: 263 ESIAWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAM 322 Query: 406 RKK 398 + K Sbjct: 323 KDK 325
>CAX2_ORYSA (Q5KQN0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) exchanger| 2) (OsCAX2) Length = 437 Score = 39.3 bits (90), Expect = 0.009 Identities = 19/44 (43%), Positives = 29/44 (65%) Frame = -3 Query: 529 LVDAVHNFSNATHIPSFFVSFIGLPLATNSSEAVSAIIFASRKK 398 LVDA+ S + ++P F+S I LP+ N++E SAI+FA + K Sbjct: 301 LVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDK 344
>CAX4_ORYSA (Q6YXZ1) Putative vacuolar cation/proton exchanger 4 (Ca(2+)/H(+)| exchanger 4) (OsCAX4) Length = 447 Score = 36.6 bits (83), Expect = 0.060 Identities = 18/44 (40%), Positives = 28/44 (63%) Frame = -3 Query: 529 LVDAVHNFSNATHIPSFFVSFIGLPLATNSSEAVSAIIFASRKK 398 LVDA+ S A +IP F+S + LP+ NS+ +A++FA + K Sbjct: 306 LVDAIDGASKAWNIPVAFISVVLLPVVGNSAGHANAVMFAVKDK 349
>CAX1B_ORYSA (Q5TKG3) Vacuolar cation/proton exchanger 1b (Ca(2+)/H(+) exchanger| 1b) (OsCAX1b) Length = 453 Score = 34.7 bits (78), Expect = 0.23 Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 2/158 (1%) Frame = -3 Query: 610 ENPGWCIAKAVGYLLLGATICAAFADPLVDAVHNFSNATHIPSFFVSFIGLPLATNSSEA 431 + P + A+ +L L + A + +V + S + + F+S I LP+ N++E Sbjct: 281 DEPVLGFSSAMIWLALMTLLTALLSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEH 340 Query: 430 VSAIIFASRKKQRTCSLTFSEVYGGVTMNNTLCLGVFLALIYFRELTWDFSSEVLVI--L 257 A+IFA + K +T G T + + V + + + + D +L L Sbjct: 341 AGAVIFALKNKM---DITLGVSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSL 397 Query: 256 LACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAIVYVL 143 +++ FT L+ L Y + +V+ Sbjct: 398 FLAILVTAFTLQEGESHYLKGLILVLCYAVISVCFFVI 435
>S19A2_HUMAN (O60779) Thiamine transporter 1 (ThTr-1) (ThTr1) (Thiamine carrier| 1) (TC1) (Solute carrier family 19 member 2) Length = 497 Score = 34.3 bits (77), Expect = 0.30 Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Frame = -3 Query: 376 FSEVY-GGVTMNNTLCLGVFLALIYFRELTWDFSSEVLVILLACVIMGLFTSFRTSFPLW 200 ++ +Y GGV +TL V + + + +++W E+ + L + +I T +W Sbjct: 328 YAAIYNGGVEAVSTLLGAVAVFAVGYIKISWSTWGEMTLSLFSLLIAAAVYIMDTVGNIW 387 Query: 199 TCLVAYLLYPLTLAIVYVLDFVFGWS*ARASSLDTRLSLIFDSL*FICLEFEVFVVFI 26 C +Y+++ I+Y+L A+ R +L+F FI L + + I Sbjct: 388 VCYASYVVF----RIIYMLLITIATFQIAANLSMERYALVFGVNTFIALALQTLLTLI 441
>HUT1_DEBHA (Q6BMV3) UDP-galactose transporter homolog 1| Length = 354 Score = 33.1 bits (74), Expect = 0.66 Identities = 29/102 (28%), Positives = 48/102 (47%) Frame = -3 Query: 490 IPSFFVSFIGLPLATNSSEAVSAIIFASRKKQRTCSLTFSEVYGGVTMNNTLCLGVFLAL 311 I +FF S +GL + SS + IF +K S V +T + + LG + +L Sbjct: 59 IQAFFASIVGLIYSVVSSRSNPLSIFTQNEKPVALKFFKSFVIISLTSSLSSPLG-YESL 117 Query: 310 IYFRELTWDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVA 185 + L + + +I V++ F +RT FPL+ C+VA Sbjct: 118 KHVDYLAYLLAKSCKLIP---VMLVHFVLYRTKFPLYKCMVA 156
>NUOM_BUCBP (Q89AT5) NADH-quinone oxidoreductase chain M (EC 1.6.99.5) (NADH| dehydrogenase I, chain M) (NDH-1, chain M) Length = 508 Score = 33.1 bits (74), Expect = 0.66 Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Frame = -3 Query: 376 FSEVYGGVTMNNTLCLGVFLALIYFRELTWDFS----SEVLVILLACVIMGLFTSFRTSF 209 +S++ G V + +TL L V+ IY LT+D+ + + ++L +C+++G F +F Sbjct: 180 YSQISGLVLLLSTLVL-VYTHYIYDHILTFDYDVLKHTSMNIVLESCIMLGFFLAFAIKI 238 Query: 208 PL 203 P+ Sbjct: 239 PI 240
>PNS1_YEAST (Q12412) Protein PNS1 (pH nine sensitive protein 1)| Length = 539 Score = 33.1 bits (74), Expect = 0.66 Identities = 27/87 (31%), Positives = 46/87 (52%) Frame = -3 Query: 481 FFVSFIGLPLATNSSEAVSAIIFASRKKQRTCSLTFSEVYGGVTMNNTLCLGVFLALIYF 302 FFVSF+G +A+ SA+I A+ K S G + +++ +GV L +++F Sbjct: 228 FFVSFVGALVASAFGFLFSAVIVATYIKYDPNSSNGGCDVSGGSCSHSKLIGV-LVVVFF 286 Query: 301 RELTWDFSSEVLVILLACVIMGLFTSF 221 + SEV+ ++ CVI G+F S+ Sbjct: 287 ---CGYYISEVIRNVIHCVISGVFGSW 310
>ARRS_MAIZE (P13027) Anthocyanin regulatory R-S protein| Length = 612 Score = 32.3 bits (72), Expect = 1.1 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Frame = -1 Query: 525 LMLSTTFLMPHTSRPSL-SRSSACLWQP-IPARLSQPSSSPAGRS 397 L L TT +P P L SR++A W+P P +PSSSP+GR+ Sbjct: 187 LELGTTDTVPEA--PDLVSRATAAFWEPQCPTYSEEPSSSPSGRA 229
>MDN1_HUMAN (Q9NU22) Midasin (MIDAS-containing protein)| Length = 5596 Score = 31.2 bits (69), Expect = 2.5 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 4/78 (5%) Frame = +2 Query: 203 EREAGPEACEEAHDDTGEQDDEHLRRE---VPRQLPEVDERQEHAQT-QRVVHGHATVYL 370 ++EA E E D G Q E RE Q+PE ER+EHA Q V Sbjct: 4987 DKEADEEGGENGPADQGFQPQEEEEREDSDTEEQVPEALERKEHASCGQTGVENMQNTQA 5046 Query: 371 *ESEGASPLLLPAGEDDG 424 E GA+P E+ G Sbjct: 5047 MELAGAAPEKEQGKEEHG 5064
>ELTD1_MOUSE (Q923X1) EGF, latrophilin seven transmembrane domain-containing| protein 1 precursor Length = 739 Score = 31.2 bits (69), Expect = 2.5 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%) Frame = -3 Query: 376 FSEVYGG-VTMNNTLCLGVFLALIYFRELTWDFSSEVLVILLAC-VIMGLFTSFRTSFPL 203 FSE+ T++ LC +FLA EL + + L C +I GL F + Sbjct: 501 FSEIQSTRTTIHKNLCCSLFLA-----ELVFLIGININTNKLVCSIIAGLLHYFFLAAFA 555 Query: 202 WTCLVAYLLYPLTLAIVYVLDFV 134 W C+ LY + + ++Y F+ Sbjct: 556 WMCIEGIHLYLIVVGVIYNKGFL 578
>SPT7_YEAST (P35177) Transcriptional activator SPT7| Length = 1332 Score = 31.2 bits (69), Expect = 2.5 Identities = 24/82 (29%), Positives = 35/82 (42%) Frame = +2 Query: 77 KNQTQACVQTRSTSL*PTEDEVEDVNDXXXXXXXXXXHQTGPEREAGPEACEEAHDDTGE 256 KN+ Q V+ S TED +D + +T +EAG E EE DD E Sbjct: 655 KNEEQDMVEESSK----TEDSSKDADAAKKDTEDGLQDKTAENKEAG-ENNEEEEDDDDE 709 Query: 257 QDDEHLRREVPRQLPEVDERQE 322 +DE + L + D+R + Sbjct: 710 DEDEDMVDSQSYLLEKDDDRDD 731
>IF2_AQUAE (O67825) Translation initiation factor IF-2| Length = 805 Score = 30.4 bits (67), Expect = 4.3 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = +2 Query: 200 PEREAGPEACEEAHDDTGEQDDEHLRREVPRQLPEVDERQEHAQTQRV 343 P G E EA D+ DDE RE+ + E ER+E QT R+ Sbjct: 543 PVEVLGFEELPEAGDELIVVDDERTAREIAEKRKEKKEREEKLQTIRL 590
>ELTD1_RAT (Q9ESC1) EGF, latrophilin and seven transmembrane domain-containing| protein 1 precursor (EGF-TM7-latrophilin-related protein) (ETL protein) Length = 738 Score = 30.4 bits (67), Expect = 4.3 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Frame = -3 Query: 376 FSEVYGG-VTMNNTLCLGVFLALIYFRELTWDFSSEVLVILLACVIMGLFTSFRTSFPLW 200 FSE+ T++ LC +FLA + F + + ++ LV +I GL F + W Sbjct: 500 FSEIQSTRTTIHKNLCCSLFLAQLVFL-VGININTNKLV---CSIIAGLLHYFFLAAFAW 555 Query: 199 TCLVAYLLYPLTLAIVYVLDFV 134 C+ LY + + ++Y F+ Sbjct: 556 MCIEGIYLYLIVVGLIYNKGFL 577
>OPT8_ARATH (Q9FJD1) Probable oligopeptide transporter 8 (AtOPT8)| Length = 733 Score = 30.4 bits (67), Expect = 4.3 Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 5/119 (4%) Frame = -3 Query: 493 HIPSFFVSFIGLPLATNSSEAVSAIIFASRKKQRTCSLTFSEVYGGVTMNNTLCLGVFLA 314 H+ +FF GL AT S+ +IF + +++ G N + + + Sbjct: 352 HMSTFFAVTYGLGFATLSASIFHVLIFNGKD-------LWTQTRGAFGKNKKMDIHTKIM 404 Query: 313 LIYFREL-TWDFSSEVLVILLACVIMGLFTSFRTSFPLW----TCLVAYLLYPLTLAIV 152 ++E+ W F S V L V + ++ + P W CL+A PL I+ Sbjct: 405 KRNYKEVPLWWFLSIFAVNLAVIVFICIYYKTQIQLPWWGAFLACLIAIFFTPLVGVIM 463
>S19A3_MOUSE (Q99PL8) Thiamine transporter 2 (ThTr-2) (ThTr2) (Solute carrier| family 19 member 3) Length = 488 Score = 30.0 bits (66), Expect = 5.6 Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 6/85 (7%) Frame = -3 Query: 304 FRELTWDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLL------YPLTLAIVYVL 143 + ++ WD E+ + + + VI G S +W C YLL + +T+A+ + Sbjct: 330 YLKVNWDLLGELGLAVFSAVIAGSLFLMNYSRSIWVCYAGYLLVKSSYSFLITIAVFQIA 389 Query: 142 DFVFGWS*ARASSLDTRLSLIFDSL 68 + A +DT ++L+ ++ Sbjct: 390 VNLSLERYALVFGIDTFIALVIQTI 414
>FGD1_HUMAN (P98174) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 961 Score = 30.0 bits (66), Expect = 5.6 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = +2 Query: 200 PEREAGPEACEEAHDDTGEQDDEHLRREVPRQLPEVDERQEHAQTQRVVH 349 P R E + ++ E+++E RE+P L E E E Q+V H Sbjct: 327 PHRPGSQEVDSDLEEEDDEEEEEEKDREIPVPLMERQESVELTVQQKVFH 376
>NRAM1_CANFA (Q9XT74) Natural resistance-associated macrophage protein 1 (NRAMP| 1) Length = 547 Score = 30.0 bits (66), Expect = 5.6 Identities = 26/103 (25%), Positives = 45/103 (43%) Frame = -3 Query: 490 IPSFFVSFIGLPLATNSSEAVSAIIFASRKKQRTCSLTFSEVYGGVTMNNTLCLGVFLAL 311 + S + F LP+ T +S FA+ + S+ M + ++ + Sbjct: 431 LQSLLLPFAVLPILTFTSMPALMQEFANGR--------LSKAITSFIMALVCAINLYFVV 482 Query: 310 IYFRELTWDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAY 182 IY L + +LV LLA V +GL T++ +WTC +A+ Sbjct: 483 IYLPSLPHP-AYFILVALLAIVYLGL-----TTYLVWTCFIAH 519
>GNRP_RAT (P28818) Guanine nucleotide-releasing protein (GNRP) (P140 Ras-GRF)| Length = 1244 Score = 30.0 bits (66), Expect = 5.6 Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 3/152 (1%) Frame = +3 Query: 18 VAYMNTTNTSNSRQINYNESKIKLKRVSRLEARAYDQPKTKSRT*TMARVRGYSRYATRQ 197 + + T N+ QI Y + L+R++ L + D T + Y + Sbjct: 619 IRFSKTMNSCKVLQIRYASVERLLERLTDLRFLSIDFLNTF--------LHSYRVFTDAV 670 Query: 198 VQSGKLVRKLVKRPMMTQASRMTSTSEEKSHVSSLK*MSAKNTPRHSVLFMVTPPY---T 368 V KL+ + K+P+ +R SH + L A +PR S F PP T Sbjct: 671 VVLDKLI-SIYKKPITAIPARSLELLFSSSHNTKLLYGDAPKSPRASRKFSSPPPLAIGT 729 Query: 369 SEKVREQVLCFFLLAKMMAETASLELVARGRP 464 S VR + L L ++ +LEL + G P Sbjct: 730 SSPVRRRKLS--LNIPIITGGKALELASLGCP 759
>MUTL_THETN (Q8RA70) DNA mismatch repair protein mutL| Length = 590 Score = 29.6 bits (65), Expect = 7.3 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = +2 Query: 428 DSLAGIGCQRQADERDKEGRDVCGIRKVVDS--INERVCKCGTNGSTEKQVPHSFGNTPA 601 ++LA I + + KE + G R VV+ I E+ +CG T +V F NTPA Sbjct: 98 EALASIAAVSKVVLQTKEENETFGTRLVVEGGKILEKT-RCGCQKGTSVEVKDVFFNTPA 156 Query: 602 R 604 R Sbjct: 157 R 157
>COX3_TRYBO (Q37355) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 286 Score = 29.6 bits (65), Expect = 7.3 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 1/110 (0%) Frame = -3 Query: 328 GVFLALIYFRELTWDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAIVY 149 GVFL L Y T + + +L ++++ +++ + T T + LV L L I Sbjct: 13 GVFLFLSY----TPLYITYLLGVVISSMMLTVGTFAITLDIILCILVVCFLITTLLVIDS 68 Query: 148 VLDFVFGWS*ARASSLDTRLSLI-FDSL*FICLEFEVFVVFIYATVXHCV 2 VLD + G +S+ + +I + L F+ EF +FVVF Y C+ Sbjct: 69 VLDSIRG-----LNSVGVLVRIIQYCFLWFVFSEFMLFVVFFYTLYSECL 113
>MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing protein 1| Length = 827 Score = 29.6 bits (65), Expect = 7.3 Identities = 18/59 (30%), Positives = 24/59 (40%) Frame = +2 Query: 245 DTGEQDDEHLRREVPRQLPEVDERQEHAQTQRVVHGHATVYL*ESEGASPLLLPAGEDD 421 + GE DDE+ +P Q H Q +V SE A P+ L A +DD Sbjct: 179 EDGESDDEY------EDIPSRTHNQSHTADQEMVDAPLAASAEPSESAPPVSLDATDDD 231
>GCY31_CAEEL (Q86C56) Soluble guanylate cyclase gcy-31 (EC 4.6.1.2)| Length = 702 Score = 29.6 bits (65), Expect = 7.3 Identities = 15/54 (27%), Positives = 24/54 (44%) Frame = +2 Query: 134 DEVEDVNDXXXXXXXXXXHQTGPEREAGPEACEEAHDDTGEQDDEHLRREVPRQ 295 +E+E + D + GP R P CE DD+ +DD+ +PR+ Sbjct: 596 EEIE-IKDDQTIQTFFVVSRHGPHRVPSPRNCESRQDDSQTEDDDDDELLLPRK 648
>VME1_CVTKE (P26021) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 230 Score = 29.6 bits (65), Expect = 7.3 Identities = 14/58 (24%), Positives = 33/58 (56%), Gaps = 5/58 (8%) Frame = -3 Query: 289 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 131 W+FS ++++ + ++ +TS S + ++ +L++PLT+ + VY L+ V+ Sbjct: 25 WNFSLGIILLFITIILQFGYTSRSMSVYVIKMIILWLMWPLTIILTIFNCVYALNNVY 82
>ELTD1_HUMAN (Q9HBW9) EGF, latrophilin and seven transmembrane domain-containing| protein 1 precursor (EGF-TM7-latrophilin-related protein) (ETL protein) Length = 690 Score = 29.6 bits (65), Expect = 7.3 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Frame = -3 Query: 376 FSEVYGG-VTMNNTLCLGVFLA-LIYFRELTWDFSSEVLVILLACVIMGLFTSFRTSFPL 203 FSE+ T++ LC +FLA L++ + + + L +I GL F + Sbjct: 452 FSEIQSTRTTIHKNLCCSLFLAELVFLVGINTNTNK-----LFCSIIAGLLHYFFLAAFA 506 Query: 202 WTCLVAYLLYPLTLAIVYVLDFV 134 W C+ LY + + ++Y F+ Sbjct: 507 WMCIEGIHLYLIVVGVIYNKGFL 529
>SACB_STRSL (Q55242) Levansucrase precursor (EC 2.4.1.10)| (Beta-D-fructofuranosyl transferase) (Sucrose 6-fructosyl transferase) Length = 969 Score = 29.3 bits (64), Expect = 9.6 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +3 Query: 111 ARAYDQPKTKSRT*TMARVRGYSRYATRQVQSGKLVRKLVKRPMM-TQASRMT-STSEEK 284 A A P+T + + T+A S + V+S ++ +P+ TQ S T S EEK Sbjct: 63 ATATATPETSTASLTVASETATSVATSEAVESSVAHSEVATKPVTETQPSNTTPSVVEEK 122 Query: 285 SHVSSLK*MSAKNTPRHSVLFMVTPPYTSEKVRE 386 + + + S TP +V + P +TSE E Sbjct: 123 ASSTVVTSSSDATTPSATVAAVSAPAHTSEAAVE 156
>SAM3_YEAST (Q08986) S-adenosylmethionine permease SAM3 (S-adenosylmethionine| metabolism protein 3) Length = 587 Score = 29.3 bits (64), Expect = 9.6 Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 12/131 (9%) Frame = -3 Query: 589 AKAVGYLLLGAT---ICAAFADPLVDAVHNFSNATHIPSFFVSFIGLPLATNSSEAVSAI 419 A +G+LL+G + + + A+ + S ATH+ F +G +ATN + A Sbjct: 109 ALLIGFLLVGTSMFCVVQSAAELSCQFPVSGSYATHVSRFIDESVGFTVATNYA---LAW 165 Query: 418 IFASRKKQRTCSLTFSEVYGGVTMNNTLCLGVFLALIY---------FRELTWDFSSEVL 266 + + + C+LT S Y T+N + + +F I F E + S + Sbjct: 166 LISFPSELIGCALTIS--YWNQTVNPAVWVAIFYVFIMVLNLFGVRGFAETEFALSIIKV 223 Query: 265 VILLACVIMGL 233 + + +I+G+ Sbjct: 224 IAIFIFIIIGI 234 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,510,206 Number of Sequences: 219361 Number of extensions: 1860319 Number of successful extensions: 7465 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 6944 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7446 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)