>gb|AY596589.1| Saccharum officinarum clone SCCCRZ2C04A09, complete sequence
          Length = 2194

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                       
Query: 370 ccacaggttccgcagctcccccctcttccaccccagcgagatcagcgtgcccagggtgaa 429
           |||||||||| |||||||||| |||||||| || |||| |||||  ||||| || |||||
Sbjct: 351 ccacaggttcggcagctcccctctcttccaaccaagcgtgatcaaggtgccaagagtgaa 410

                                                                 
Query: 430 aggcacgatgtagagcagcgcgggctgcccgtgcccgtccatcaggttcagcgc 483
            ||||||||||| || || || || || || || || |||||||||||||||||
Sbjct: 411 gggcacgatgtacagaagggcaggttggccatgtccatccatcaggttcagcgc 464

>gb|AY107837.1| Zea mays PCO093632 mRNA sequence
          Length = 1192

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 95/114 (83%)
 Strand = Plus / Minus

                                                                       
Query: 370 ccacaggttccgcagctcccccctcttccaccccagcgagatcagcgtgcccagggtgaa 429
           |||||||||| |||||||||| |||||||| || |||| |||||  ||||| || |||||
Sbjct: 869 ccacaggttctgcagctcccctctcttccatccaagcgcgatcaaggtgccaagagtgaa 810

                                                                 
Query: 430 aggcacgatgtagagcagcgcgggctgcccgtgcccgtccatcaggttcagcgc 483
            ||||||||||| |  || || || || || ||||| |||||||||||||||||
Sbjct: 809 gggcacgatgtacaaaagggcaggttgtccatgcccatccatcaggttcagcgc 756

>gb|AF417575.1|AF417575 Euphorbia esula growth-on protein GRO11 (Gro11) mRNA, complete cds
          Length = 1904

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 416  gtgcccagggtgaaaggcacgatgtagagcagcgcgggctgcccgtgcccgtccatcagg 475
            |||||||| |||||||| || ||||||||||| || || || |||||||| ||||| |||
Sbjct: 1551 gtgcccagagtgaaaggaacaatgtagagcagtgcaggttggccgtgcccatccattagg 1492

              
Query: 476  tt 477
            ||
Sbjct: 1491 tt 1490

>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0019E05, complete sequence
          Length = 129021

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 277   ggcctcctcaccatcctcatcgtcagc 303
             |||||||||||||||||||||| ||||
Sbjct: 14684 ggcctcctcaccatcctcatcgacagc 14658

>gb|AC137923.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0066C04, complete sequence
          Length = 133944

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 277   ggcctcctcaccatcctcatcgtcagc 303
             |||||||||||||||||||||| ||||
Sbjct: 83511 ggcctcctcaccatcctcatcgacagc 83485

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 277      ggcctcctcaccatcctcatcgtcagc 303
                |||||||||||||||||||||| ||||
Sbjct: 17144855 ggcctcctcaccatcctcatcgacagc 17144829



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 277      ggcctcctcaccatcctcatcgtcagc 303
                |||||||||||||||||||||| ||||
Sbjct: 11664215 ggcctcctcaccatcctcatcgacagc 11664241

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 277      ggcctcctcaccatcctcatcgtcagc 303
                |||||||||||||||||||||| ||||
Sbjct: 17240041 ggcctcctcaccatcctcatcgacagc 17240015



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 277      ggcctcctcaccatcctcatcgtcagc 303
                |||||||||||||||||||||| ||||
Sbjct: 11743404 ggcctcctcaccatcctcatcgacagc 11743430

>ref|XM_522582.1| PREDICTED: Pan troglodytes similar to phosphatidylinositol transfer
           protein, membrane-associated 2; PYK2 N-terminal
           domain-interacting receptor 3; retinal degeneration B
           alpha 2 (Drosophila) (LOC467183), mRNA
          Length = 1053

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 276 tggcctcctcaccatcctcat 296
           |||||||||||||||||||||
Sbjct: 379 tggcctcctcaccatcctcat 359

>gb|DQ311222.1| Bombyx mori presenilin-like signal peptide peptidase mRNA, complete
            cds
          Length = 1404

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 431  ggcacgatgtagagcagcgcgggctgcccgtgc 463
            ||||||| ||| ||||||||||||||| |||||
Sbjct: 1033 ggcacgaggtacagcagcgcgggctgcgcgtgc 1001

>dbj|AB179084.1| Macaca fascicularis testis cDNA clone: QtsA-12645, similar to human
            phosphatidylinositol transfer protein,membrane-associated
            2 (PITPNM2), mRNA, RefSeq: NM_020845.1
          Length = 1835

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 276  tggcctcctcaccatcctcat 296
            |||||||||||||||||||||
Sbjct: 1039 tggcctcctcaccatcctcat 1019

>gb|AF334585.1|AF334585 Homo sapiens NIR3 mRNA, complete cds
          Length = 5000

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 276 tggcctcctcaccatcctcat 296
           |||||||||||||||||||||
Sbjct: 880 tggcctcctcaccatcctcat 860

>gb|AE004784.1| Pseudomonas aeruginosa PAO1, section 345 of 529 of the complete
            genome
          Length = 12469

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 316  ggccatctgcacgtagccctg 336
            |||||||||||||||||||||
Sbjct: 4270 ggccatctgcacgtagccctg 4290

>gb|AC026362.38| Homo sapiens 12 BAC RP11-197N18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 163077

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 276   tggcctcctcaccatcctcat 296
             |||||||||||||||||||||
Sbjct: 77766 tggcctcctcaccatcctcat 77786

>dbj|AB040890.2| Homo sapiens mRNA for KIAA1457 protein, partial cds
          Length = 6799

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 276  tggcctcctcaccatcctcat 296
            |||||||||||||||||||||
Sbjct: 1023 tggcctcctcaccatcctcat 1003

>ref|NM_020845.2| Homo sapiens phosphatidylinositol transfer protein,
           membrane-associated 2 (PITPNM2), mRNA
          Length = 6754

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 276 tggcctcctcaccatcctcat 296
           |||||||||||||||||||||
Sbjct: 941 tggcctcctcaccatcctcat 921

>ref|NM_121506.2| Arabidopsis thaliana unknown protein AT5G15020 mRNA, complete cds
          Length = 4404

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 284  tcaccatcctcatcgtcagc 303
            ||||||||||||||||||||
Sbjct: 3047 tcaccatcctcatcgtcagc 3028

>ref|XM_362719.1| Magnaporthe grisea 70-15 hypothetical protein (MG08329.4) partial
           mRNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 281 tcctcaccatcctcatcgtc 300
           ||||||||||||||||||||
Sbjct: 698 tcctcaccatcctcatcgtc 679

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 403     cagcgagatcagcgtgccca 422
               ||||||||||||||||||||
Sbjct: 2111574 cagcgagatcagcgtgccca 2111593

>ref|XM_752783.1| Ustilago maydis 521 hypothetical protein (UM01729.1) partial mRNA
          Length = 2418

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 284  tcaccatcctcatcgtcagc 303
            ||||||||||||||||||||
Sbjct: 1508 tcaccatcctcatcgtcagc 1489

>gb|AC084383.1| Mus musculus BAC clone RP23-10B20 from 17, complete sequence
          Length = 203589

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 381    gcagctcccccctcttccacccca 404
              |||||||||||||| |||||||||
Sbjct: 134502 gcagctcccccctcctccacccca 134479

>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11,
              DP09G08, DP35C12 of chromosome 5  of Podospora anserina
          Length = 322194

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    cctcctcaccatcctcatcg 298
              ||||||||||||||||||||
Sbjct: 235268 cctcctcaccatcctcatcg 235287

>emb|AL391146.1|ATF2G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F2G14 (ESSA project)
          Length = 85992

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   tcaccatcctcatcgtcagc 303
             ||||||||||||||||||||
Sbjct: 45861 tcaccatcctcatcgtcagc 45880

>gb|AC165262.2| Mus musculus BAC clone RP23-89H5 from chromosome 14, complete sequence
          Length = 201412

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    cttggcctcctcaccatcct 293
              ||||||||||||||||||||
Sbjct: 133586 cttggcctcctcaccatcct 133567

>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179892

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   gagatcaggtgctactacta 161
             ||||||||||||||||||||
Sbjct: 81349 gagatcaggtgctactacta 81368

>gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 186714

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    gagatcaggtgctactacta 161
              ||||||||||||||||||||
Sbjct: 185578 gagatcaggtgctactacta 185559

>gb|AC090526.3|AC090526 Homo sapiens chromosome 15 clone RP11-208K4 map 15q21.1, complete
             sequence
          Length = 168050

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   atgttcttggcctcctcacc 288
             ||||||||||||||||||||
Sbjct: 77271 atgttcttggcctcctcacc 77290

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 279     cctcctcaccatcctcatcg 298
               ||||||||||||||||||||
Sbjct: 1383543 cctcctcaccatcctcatcg 1383524

>gb|AC154206.2| Mus musculus BAC clone RP24-104P20 from 14, complete sequence
          Length = 167116

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   cttggcctcctcaccatcct 293
             ||||||||||||||||||||
Sbjct: 99432 cttggcctcctcaccatcct 99451

>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete
              sequence
          Length = 308317

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    gagatcaggtgctactacta 161
              ||||||||||||||||||||
Sbjct: 208790 gagatcaggtgctactacta 208809

>gb|AC002996.1|AC002996 Homo sapiens 12q24 BAC RPCI11-162P23 (Roswell Park Cancer Institute
             Human BAC library) complete sequence
          Length = 114842

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   agcaggaggaggcttggcca 320
             ||||||||||||||||||||
Sbjct: 16078 agcaggaggaggcttggcca 16097

>emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC DP35C12 of chromosome 5 of
             Podospora anserina
          Length = 101256

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   cctcctcaccatcctcatcg 298
             ||||||||||||||||||||
Sbjct: 86927 cctcctcaccatcctcatcg 86908


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,302,908
Number of Sequences: 3902068
Number of extensions: 3302908
Number of successful extensions: 68092
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67877
Number of HSP's gapped (non-prelim): 214
length of query: 553
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 530
effective length of database: 17,143,297,704
effective search space: 9085947783120
effective search space used: 9085947783120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)