Clone Information

BLAST Search Result

Clone Name	rbaak4n20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL3_ORYSA (P35684) 60S ribosomal protein L3	249	2e-66
2	RL3B_ARATH (P22738) 60S ribosomal protein L3	230	2e-60
3	RL3A_ARATH (P17094) 60S ribosomal protein L3	224	8e-59
4	RL3_DROME (O16797) 60S ribosomal protein L3	181	1e-45
5	RL3_TOXCA (P49149) 60S ribosomal protein L3	174	1e-43
6	RL3_CAEEL (P50880) 60S ribosomal protein L3	169	3e-42
7	RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)	169	5e-42
8	RL3_RAT (P21531) 60S ribosomal protein L3 (L4)	167	2e-41
9	RL3_BOVIN (P39872) 60S ribosomal protein L3	167	2e-41
10	RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3	167	2e-41
11	RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-bindi...	167	2e-41
12	RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3	166	3e-41
13	RL3_ASHGO (Q759R7) 60S ribosomal protein L3	166	4e-41
14	RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like	164	1e-40
15	RL3_DICDI (P34113) 60S ribosomal protein L3	162	7e-40
16	RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like	160	1e-39
17	RL3_KLULA (Q6CJR7) 60S ribosomal protein L3	159	6e-39
18	RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Mainten...	158	7e-39
19	RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)	158	1e-38
20	RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3	157	2e-38
21	RL3B_SCHPO (P36584) 60S ribosomal protein L3-B	155	6e-38
22	RL3A_SCHPO (P40372) 60S ribosomal protein L3-A	155	6e-38
23	RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3	153	2e-37
24	RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3	153	2e-37
25	RL3_NEUCR (P59671) 60S ribosomal protein L3	151	1e-36
26	RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P	90	3e-18
27	RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P	90	4e-18
28	RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P	87	2e-17
29	RL3_PYRHO (O59418) 50S ribosomal protein L3P	87	3e-17
30	RL3_METAC (Q8TRU7) 50S ribosomal protein L3P	81	2e-15
31	RL3_METJA (P54014) 50S ribosomal protein L3P	81	2e-15
32	RL3_METMA (Q8PV50) 50S ribosomal protein L3P	80	3e-15
33	RL3_METKA (Q8TY90) 50S ribosomal protein L3P	80	3e-15
34	RL3_ARCFU (O28354) 50S ribosomal protein L3P	79	7e-15
35	RL3_METTH (O26110) 50S ribosomal protein L3P	79	1e-14
36	RL3_METVA (Q9UWG2) 50S ribosomal protein L3P	77	3e-14
37	RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)	75	1e-13
38	RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P	74	3e-13
39	RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P	64	2e-10
40	RL3_THEVO (Q97BX7) 50S ribosomal protein L3P	61	2e-09
41	RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)	60	3e-09
42	RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P	60	4e-09
43	RL3_SULTO (Q975I1) 50S ribosomal protein L3P	60	5e-09
44	RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P	59	8e-09
45	RL3_SULAC (Q4JB40) 50S ribosomal protein L3P	56	5e-08
46	RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P	56	5e-08
47	RL3_NANEQ (P60458) 50S ribosomal protein L3P	53	6e-07
48	RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase...	39	0.006
49	RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase...	39	0.006
50	RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase...	39	0.008
51	CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (...	31	1.8
52	RL3_MYCPU (Q98PY0) 50S ribosomal protein L3	31	2.3
53	IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)	31	2.3
54	IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)	31	2.3
55	ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor...	30	3.0
56	HEM3_DESVH (Q72AV0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG...	30	3.0
57	RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase...	30	3.0
58	BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3...	30	3.9
59	POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)	30	3.9
60	RUVB_ENTFA (Q839T5) Holliday junction ATP-dependent DNA helicase...	30	5.1
61	LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A ...	29	6.7
62	YHES_ECOLI (P63389) Hypothetical ABC transporter ATP-binding pro...	29	8.7
63	YHES_ECO57 (P63390) Hypothetical ABC transporter ATP-binding pro...	29	8.7
64	CYSA_PSEPK (Q88CL2) Sulfate/thiosulfate import ATP-binding prote...	29	8.7
65	VIT2_PERAM (Q9BPS0) Vitellogenin 2 precursor (Vg-2)	29	8.7

>RL3_ORYSA (P35684) 60S ribosomal protein L3|
          Length = 388

 Score =  249 bits (637), Expect = 2e-66
 Identities = 120/127 (94%), Positives = 123/127 (96%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RVSYTVARAGQNGYHHRTEMNKKVYKIGK GQE+H A TEFDRTEKDITPMGGFPHYGVV
Sbjct: 261 RVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVV 320

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 157
           K DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF+DTSSKFGHGRFQTTDEKQ
Sbjct: 321 KGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQ 380

Query: 156 RFYGKLK 136
           RF+GKLK
Sbjct: 381 RFFGKLK 387

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>RL3B_ARATH (P22738) 60S ribosomal protein L3|
          Length = 389

 Score =  230 bits (586), Expect = 2e-60
 Identities = 106/125 (84%), Positives = 117/125 (93%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RVSYTVARAGQNGYHHRTEMNKKVY++GKVGQETH A TE+DRTEKDITPMGGFPHYG+V
Sbjct: 261 RVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYGIV 320

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 157
           K DYLMIKGCCVGPKKRVVTLRQ+LLKQTSRLA+EEIKLKF+D +S  GHGRFQT+ EK 
Sbjct: 321 KEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQEKA 380

Query: 156 RFYGK 142
           +FYG+
Sbjct: 381 KFYGR 385

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>RL3A_ARATH (P17094) 60S ribosomal protein L3|
          Length = 388

 Score =  224 bits (572), Expect = 8e-59
 Identities = 104/126 (82%), Positives = 116/126 (92%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RVSYTVARAGQNGYHHRTE+NKK+Y++GKVG E H A TE+DRTEKD+TPMGGFPHYG+V
Sbjct: 261 RVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIV 320

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 157
           K DYLMIKGCCVGPKKRVVTLRQSLL QTSRLALEEIKLKF+DT+S FGHGRFQT+ EK 
Sbjct: 321 KDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSLEKM 380

Query: 156 RFYGKL 139
           RFY ++
Sbjct: 381 RFYNRV 386

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>RL3_DROME (O16797) 60S ribosomal protein L3|
          Length = 415

 Score =  181 bits (458), Expect = 1e-45
 Identities = 90/134 (67%), Positives = 104/134 (77%), Gaps = 7/134 (5%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGG 358
           RVS TVARAGQ GYHHRTE+NKK+Y+IG  G  T D       ASTE+D T+K ITPMGG
Sbjct: 260 RVSTTVARAGQKGYHHRTEINKKIYRIG-AGIHTKDGKVIKNNASTEYDLTDKSITPMGG 318

Query: 357 FPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRF 178
           FPHYG V  D++MIKGCC+G KKR++TLR+SLLK T R ALE+IKLKF+DTSSK GHGRF
Sbjct: 319 FPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRF 378

Query: 177 QTTDEKQRFYGKLK 136
           QT  +K  F G LK
Sbjct: 379 QTPADKLAFMGPLK 392

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>RL3_TOXCA (P49149) 60S ribosomal protein L3|
          Length = 401

 Score =  174 bits (441), Expect = 1e-43
 Identities = 81/130 (62%), Positives = 102/130 (78%), Gaps = 3/130 (2%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHY 346
           RV +TVARAGQ GYHHRTE+NKK+Y++GK     +   +  T++D TEK + PMGGFPHY
Sbjct: 260 RVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKNGGTDYDITEKSVNPMGGFPHY 319

Query: 345 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 166
           G+V  D++MI+GCCVG KKR +TLR+SL+ QT R A E+I LK++DTSSKFGHGRFQT  
Sbjct: 320 GLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFGHGRFQTHA 379

Query: 165 EKQRFYGKLK 136
           EK+ F GKLK
Sbjct: 380 EKRAFMGKLK 389

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>RL3_CAEEL (P50880) 60S ribosomal protein L3|
          Length = 401

 Score =  169 bits (429), Expect = 3e-42
 Identities = 80/130 (61%), Positives = 104/130 (80%), Gaps = 3/130 (2%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVG---QETHDASTEFDRTEKDITPMGGFPHY 346
           RV++TVARAGQ G+HHRT +N K+Y+IGK     +  ++ STEFD T+K ITPMGGFP Y
Sbjct: 261 RVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRY 320

Query: 345 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 166
           G+V  DY+M++G  +GPKKR++TLR+SL+ QT R+A E+I LK++DTSSK GHGRFQTT 
Sbjct: 321 GIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTA 380

Query: 165 EKQRFYGKLK 136
           EK+ F GKLK
Sbjct: 381 EKRAFMGKLK 390

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>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)|
          Length = 402

 Score =  169 bits (427), Expect = 5e-42
 Identities = 84/133 (63%), Positives = 106/133 (79%), Gaps = 6/133 (4%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-HDASTEFDRTEKDITPMGGF 355
           RV++TVARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF
Sbjct: 260 RVAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGF 319

Query: 354 PHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 175
            HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQ
Sbjct: 320 VHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQ 379

Query: 174 TTDEKQRFYGKLK 136
           T +EK+ F G LK
Sbjct: 380 TMEEKKAFMGPLK 392

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>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)|
          Length = 402

 Score =  167 bits (423), Expect = 2e-41
 Identities = 83/133 (62%), Positives = 106/133 (79%), Gaps = 6/133 (4%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-HDASTEFDRTEKDITPMGGF 355
           RV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF
Sbjct: 260 RVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGF 319

Query: 354 PHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 175
            HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQ
Sbjct: 320 VHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQ 379

Query: 174 TTDEKQRFYGKLK 136
           T +EK+ F G LK
Sbjct: 380 TMEEKKAFMGPLK 392

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>RL3_BOVIN (P39872) 60S ribosomal protein L3|
          Length = 402

 Score =  167 bits (423), Expect = 2e-41
 Identities = 83/133 (62%), Positives = 106/133 (79%), Gaps = 6/133 (4%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-HDASTEFDRTEKDITPMGGF 355
           RV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF
Sbjct: 260 RVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGF 319

Query: 354 PHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 175
            HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQ
Sbjct: 320 VHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQ 379

Query: 174 TTDEKQRFYGKLK 136
           T +EK+ F G LK
Sbjct: 380 TVEEKKAFMGPLK 392

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>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3|
          Length = 402

 Score =  167 bits (422), Expect = 2e-41
 Identities = 83/133 (62%), Positives = 106/133 (79%), Gaps = 6/133 (4%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-HDASTEFDRTEKDITPMGGF 355
           RV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF
Sbjct: 260 RVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGF 319

Query: 354 PHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 175
            HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQ
Sbjct: 320 VHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQ 379

Query: 174 TTDEKQRFYGKLK 136
           T +EK+ F G LK
Sbjct: 380 TMEEKKAFMGPLK 392

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>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)|
           (TARBP-B)
          Length = 402

 Score =  167 bits (422), Expect = 2e-41
 Identities = 83/133 (62%), Positives = 106/133 (79%), Gaps = 6/133 (4%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-HDASTEFDRTEKDITPMGGF 355
           RV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF
Sbjct: 260 RVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGF 319

Query: 354 PHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 175
            HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQ
Sbjct: 320 VHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQ 379

Query: 174 TTDEKQRFYGKLK 136
           T +EK+ F G LK
Sbjct: 380 TMEEKKAFMGPLK 392

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>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3|
          Length = 401

 Score =  166 bits (421), Expect = 3e-41
 Identities = 79/130 (60%), Positives = 103/130 (79%), Gaps = 3/130 (2%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVG---QETHDASTEFDRTEKDITPMGGFPHY 346
           RV++TVARAGQ G+HHRT +N K+Y+IGK     +  ++ STEFD T+K I PMGGFP Y
Sbjct: 261 RVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRY 320

Query: 345 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 166
           G+V  DY+M++G  +GPKKR++TLR+SL+ QT R+A E+I LK++DTSSK GHGRFQTT 
Sbjct: 321 GLVNQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTA 380

Query: 165 EKQRFYGKLK 136
           EK+ F GKLK
Sbjct: 381 EKRAFMGKLK 390

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>RL3_ASHGO (Q759R7) 60S ribosomal protein L3|
          Length = 388

 Score =  166 bits (420), Expect = 4e-41
 Identities = 83/126 (65%), Positives = 98/126 (77%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V +TVARAGQNGYHHRT +N KVY+IGK G E + A+TEFDRT+K ITPMGGF HYG V 
Sbjct: 261 VMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGN-AATEFDRTKKTITPMGGFVHYGAVN 319

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 154
            D++M+KG   G +KRVVTLR+SL   TSR ALEE+ LK++DT+SKFG GRFQT  EK  
Sbjct: 320 NDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKHA 379

Query: 153 FYGKLK 136
           F G LK
Sbjct: 380 FMGTLK 385

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>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like|
          Length = 406

 Score =  164 bits (415), Expect = 1e-40
 Identities = 81/134 (60%), Positives = 99/134 (73%), Gaps = 7/134 (5%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGG 358
           RV  ++ARAGQ GYHHRTE+NKK+Y+IG+ G    D       AST +D T+K ITP+GG
Sbjct: 260 RVGCSIARAGQKGYHHRTELNKKIYRIGR-GLHMEDGKVVKNNASTSYDVTDKSITPLGG 318

Query: 357 FPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRF 178
           FPHYG V  D++M+KGC  G KKRV+TLR+SLL   SR ALE I+LKF+DT+SKFGHGRF
Sbjct: 319 FPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRF 378

Query: 177 QTTDEKQRFYGKLK 136
           QT  EK+ F G  K
Sbjct: 379 QTAQEKRAFMGPQK 392

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>RL3_DICDI (P34113) 60S ribosomal protein L3|
          Length = 397

 Score =  162 bits (409), Expect = 7e-40
 Identities = 77/131 (58%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKV----GQETHDASTEFDRTEKDITPMGGFPH 349
           RVS TV RAGQ GYHHR E NKK+Y+IG+     G++     TEFD TEK I PMGGF H
Sbjct: 261 RVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAH 320

Query: 348 YGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTT 169
           YG+VK ++LM+KGC  GP+KR +TLR+S+  QT R ALE+I LKF+DTSSKFGHG  QT 
Sbjct: 321 YGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTA 380

Query: 168 DEKQRFYGKLK 136
           ++K +++G  K
Sbjct: 381 EDKTKYFGVKK 391

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>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like|
          Length = 406

 Score =  160 bits (406), Expect = 1e-39
 Identities = 79/134 (58%), Positives = 98/134 (73%), Gaps = 7/134 (5%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGG 358
           RV  ++ARAGQ GYHHRTE+NKK+++IG+ G    D       AST +D T K ITP+GG
Sbjct: 260 RVGCSIARAGQKGYHHRTELNKKIFRIGR-GPHMEDGKLVKNNASTSYDVTAKSITPLGG 318

Query: 357 FPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRF 178
           FPHYG V  D++M+KGC  G KKRV+TLR+SLL   SR A+E I+LKF+DT+SKFGHGRF
Sbjct: 319 FPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRF 378

Query: 177 QTTDEKQRFYGKLK 136
           QT  EK+ F G  K
Sbjct: 379 QTAQEKRAFMGPQK 392

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>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3|
          Length = 387

 Score =  159 bits (401), Expect = 6e-39
 Identities = 77/126 (61%), Positives = 97/126 (76%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V ++VARAGQ GYHHRT +N KVY++GK G +  +A+TEFDRT+K ITPMGGF HYG + 
Sbjct: 260 VMWSVARAGQRGYHHRTSINHKVYRVGK-GDDEANAATEFDRTKKTITPMGGFVHYGAIN 318

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 154
            D++++KG   G +KRVVTLR+SL   TSR ALEE+ LK++DT+SKFG GRFQT  EK  
Sbjct: 319 NDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHA 378

Query: 153 FYGKLK 136
           F G LK
Sbjct: 379 FLGTLK 384

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>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of|
           killer protein 8) (Trichodermin resistance protein)
          Length = 386

 Score =  158 bits (400), Expect = 7e-39
 Identities = 75/126 (59%), Positives = 96/126 (76%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V ++VARAGQ GYH RT +N K+Y++GK G +  + +T FDRT+K ITPMGGF HYG +K
Sbjct: 259 VMWSVARAGQRGYHSRTSINHKIYRVGK-GDDEANGATSFDRTKKTITPMGGFVHYGEIK 317

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 154
            D++M+KGC  G +KR+VTLR+SL   TSR ALEE+ LK++DT+SKFG GRFQT  EK  
Sbjct: 318 NDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHA 377

Query: 153 FYGKLK 136
           F G LK
Sbjct: 378 FMGTLK 383

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>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)|
          Length = 392

 Score =  158 bits (399), Expect = 1e-38
 Identities = 78/126 (61%), Positives = 98/126 (77%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V +TVARAGQ GYHHRT  N KV++IGK G +  +AST+FD ++K ITPMGGF  YG VK
Sbjct: 261 VQWTVARAGQMGYHHRTSCNHKVFRIGK-GSDEGNASTDFDISKKQITPMGGFVRYGEVK 319

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 154
            DY+M+KG   G KKRV+TLR++L  QTSR A E+++LK++DTSSKFGHG FQT +EK+ 
Sbjct: 320 NDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKWIDTSSKFGHGAFQTPEEKRA 379

Query: 153 FYGKLK 136
           F G LK
Sbjct: 380 FMGTLK 385

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>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3|
          Length = 387

 Score =  157 bits (396), Expect = 2e-38
 Identities = 77/126 (61%), Positives = 96/126 (76%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V ++VARAGQ GYHHRT +N K+Y+IGK G +  +A+T FDRT+K I PMGGF HYG+V 
Sbjct: 260 VMWSVARAGQRGYHHRTSINHKIYRIGK-GDDEGNAATNFDRTKKTINPMGGFVHYGMVN 318

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 154
            D++M+KG   G KKRVVTLR+SL   TSR A+EE+ LK++DT+SKFG GRFQT  EK  
Sbjct: 319 NDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLKWIDTASKFGKGRFQTPAEKHA 378

Query: 153 FYGKLK 136
           F G LK
Sbjct: 379 FMGTLK 384

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>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B|
          Length = 387

 Score =  155 bits (392), Expect = 6e-38
 Identities = 76/126 (60%), Positives = 96/126 (76%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V +TVARAG  GY HRT++N K+Y+IG  G +  +AST+FD TEK ITPMGGF  YGVV+
Sbjct: 259 VQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVE 317

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 154
            D++M+ G   GP KRV+TLR+SLL  TSR ALE + LK++DT+SKFGHGRFQT  E ++
Sbjct: 318 NDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQ 377

Query: 153 FYGKLK 136
           F G LK
Sbjct: 378 FLGTLK 383

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>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A|
          Length = 387

 Score =  155 bits (392), Expect = 6e-38
 Identities = 76/126 (60%), Positives = 96/126 (76%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V +TVARAG  GY HRT++N K+Y+IG  G +  +AST+FD TEK ITPMGGF  YGVV+
Sbjct: 259 VQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVE 317

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 154
            D++M+ G   GP KRV+TLR+SLL  TSR ALE + LK++DT+SKFGHGRFQT  E ++
Sbjct: 318 NDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQ 377

Query: 153 FYGKLK 136
           F G LK
Sbjct: 378 FLGTLK 383

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>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3|
          Length = 383

 Score =  153 bits (387), Expect = 2e-37
 Identities = 78/127 (61%), Positives = 96/127 (75%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RV Y++ARAGQ G+H RTE NK+VY IG     + +  TEFD TEK I+PMGGFPHYG V
Sbjct: 255 RVMYSIARAGQMGFHRRTEKNKRVYMIGN---GSSNIKTEFDLTEKPISPMGGFPHYGEV 311

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 157
           + D++M+KG  VG +KRVVTLR+SLL+Q    A EE+ +KFVDTSSK GHGRFQT+ EK+
Sbjct: 312 RNDFIMVKGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKK 368

Query: 156 RFYGKLK 136
            FYG  K
Sbjct: 369 AFYGARK 375

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>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3|
          Length = 389

 Score =  153 bits (387), Expect = 2e-37
 Identities = 75/126 (59%), Positives = 93/126 (73%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V +TVARAGQNG+HHRT +N KVY++G  G E+  A TEFDRT+K I PMGGF  YG VK
Sbjct: 260 VQWTVARAGQNGFHHRTSINHKVYRVGSAGDESSGA-TEFDRTKKTINPMGGFVRYGNVK 318

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 154
            D++++KG   G KKR+VT+R+SL   TSR A E + LK++DT+SKFG GRFQT  EK  
Sbjct: 319 NDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKHA 378

Query: 153 FYGKLK 136
           F G LK
Sbjct: 379 FLGTLK 384

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>RL3_NEUCR (P59671) 60S ribosomal protein L3|
          Length = 392

 Score =  151 bits (381), Expect = 1e-36
 Identities = 74/126 (58%), Positives = 95/126 (75%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V +TVARAGQ GYHHRT +N K+Y+IGK G     A+TE D T+K ITPMGGF  YG + 
Sbjct: 261 VQWTVARAGQAGYHHRTSVNHKIYRIGK-GDAEDSAATEVDVTKKKITPMGGFVRYGEIN 319

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 154
            D++M+KG   G KKRV+TLR+S+   TSR ALE+++LK++DTSS+FGHG FQT  EK++
Sbjct: 320 NDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQTPAEKKQ 379

Query: 153 FYGKLK 136
           F G LK
Sbjct: 380 FQGTLK 385

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>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P|
          Length = 365

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 43/107 (40%), Positives = 68/107 (63%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RV +TV  AGQ G+HHRTE+NK++  IG+ G+   D +TE +     ITP GGFPHYG+V
Sbjct: 263 RVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLKLDENTEIE-----ITPKGGFPHYGIV 317

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 196
           ++D++MI G   G  KR++ +R ++     +  ++  ++ +V   SK
Sbjct: 318 RSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364

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>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P|
          Length = 346

 Score = 89.7 bits (221), Expect = 4e-18
 Identities = 44/107 (41%), Positives = 68/107 (63%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RV +TV +AGQ G+HHRTE NK++  IG+ G+   D +      E +ITP GGFPHYG+V
Sbjct: 245 RVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKLVLDGN------EIEITPKGGFPHYGIV 298

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 196
           ++D+LMI+G   G  KR++ +R ++     +  +E  ++ +V   SK
Sbjct: 299 RSDFLMIEGTIPGSFKRIIRVRPAIRPPKKKPPVERPQITYVSRESK 345

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>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P|
          Length = 361

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 42/107 (39%), Positives = 67/107 (62%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RV +TV  AGQ G+HHRTE+NK++  IG+ G+   D +      E +ITP GGFPHYG+V
Sbjct: 260 RVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLVIDGN------EIEITPKGGFPHYGIV 313

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 196
           ++D++MI G   G  KR++ +R ++     +  ++  ++ +V   SK
Sbjct: 314 RSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 360

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>RL3_PYRHO (O59418) 50S ribosomal protein L3P|
          Length = 362

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 42/107 (39%), Positives = 66/107 (61%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RV +TV  AGQ G+HHRTE+NK++  IG+ G+   D +      E +ITP GGFPHYG+V
Sbjct: 261 RVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLVIDGN------EIEITPKGGFPHYGIV 314

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 196
           + D++MI G   G  KR++ +R ++     +  ++  ++ +V   SK
Sbjct: 315 RGDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 361

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>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P|
          Length = 337

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 43/109 (39%), Positives = 62/109 (56%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RVS+ V + GQ GYH RTE NK++ KIG  G+E              +TP GGF +YG+V
Sbjct: 245 RVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLV 290

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 190
           + DY++IKG   GP KR++ LR  +  +  +  L E  + ++   SK G
Sbjct: 291 RGDYILIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337

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>RL3_METJA (P54014) 50S ribosomal protein L3P|
          Length = 335

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 43/108 (39%), Positives = 63/108 (58%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V ++V   GQ GYH RTE NK++ KIG  G E              ITP GGF HYGV++
Sbjct: 243 VMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE--------------ITPKGGFLHYGVIR 288

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 190
            +Y+++KG   GP KR++ LR+++  Q   + + EI   ++ T+SK G
Sbjct: 289 NNYVVLKGSVQGPAKRLIVLRRAIRPQEPLIKVPEI--TYISTTSKQG 334

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>RL3_METMA (Q8PV50) 50S ribosomal protein L3P|
          Length = 337

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 43/109 (39%), Positives = 62/109 (56%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RVS+ V + GQ GYH RTE NK++ KIG  G+E              +TP GGF +YG+V
Sbjct: 245 RVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLV 290

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 190
           + DY++IKG   GP KR++ LR  +  +  +  L E  + ++   SK G
Sbjct: 291 RGDYVLIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337

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>RL3_METKA (Q8TY90) 50S ribosomal protein L3P|
          Length = 361

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 40/85 (47%), Positives = 54/85 (63%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RV +TV  AGQ GYH RTE NK++ KIG+ G+E              +TP GGF +YGVV
Sbjct: 248 RVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEE--------------VTPRGGFVNYGVV 293

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSL 262
           + DY+MI G   GPKKR++ +R ++
Sbjct: 294 RGDYIMIHGTVPGPKKRLIRVRPAV 318

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>RL3_ARCFU (O28354) 50S ribosomal protein L3P|
          Length = 331

 Score = 79.0 bits (193), Expect = 7e-15
 Identities = 40/108 (37%), Positives = 64/108 (59%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V +TV +AGQ G+H RTE NK++ KIG+ G+E              ITP GGF HYGV++
Sbjct: 239 VRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE--------------ITPKGGFLHYGVIR 284

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 190
             Y+++ G   GP KR++ +R ++  +  +   + + + +V T+SK G
Sbjct: 285 TQYVLVTGSVPGPVKRLIRMRDAI--RPPKAHFDGVNIVYVSTTSKQG 330

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>RL3_METTH (O26110) 50S ribosomal protein L3P|
          Length = 337

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKD-ITPMGGFPHYGV 340
           R  +TV +AGQ GYH RTE NK++ KIG             D +E D + P GGF  YG+
Sbjct: 242 RTMWTVPQAGQMGYHRRTEYNKQILKIG-------------DASEADLVNPDGGFVRYGL 288

Query: 339 VKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 190
           V+ DY+MIKG   GP KR+V LR+++  + +    E  ++ ++ T+SK G
Sbjct: 289 VRNDYVMIKGSVPGPTKRLVVLRKAI--RAAGKQEEAPQINYISTASKQG 336

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>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P|
          Length = 334

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 43/110 (39%), Positives = 60/110 (54%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RV +TV  AGQ G+H RTE NK++ K+G  G E              ITP GGF +YG V
Sbjct: 241 RVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAV 286

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGH 187
           K  Y+++KG   GP KR+V LR ++     +  L E+   ++   SK G+
Sbjct: 287 KNGYVVVKGTVQGPAKRLVVLRGAVRPAEDKFGLPEV--TYISKESKQGN 334

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>RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)|
          Length = 130

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 6/73 (8%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGF 355
           R +++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++  T++D ++K I P+G F
Sbjct: 58  RXAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRF 117

Query: 354 PHYGVVKADYLMI 316
            HYG V  D++M+
Sbjct: 118 VHYGEVTNDFVML 130

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>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P|
          Length = 338

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 38/81 (46%), Positives = 48/81 (59%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V +T  R GQ G+H RTE NK++ KIG+ G E              ITP  GFPHYGVVK
Sbjct: 247 VMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE--------------ITPKSGFPHYGVVK 292

Query: 333 ADYLMIKGCCVGPKKRVVTLR 271
             Y++I+G   G +KR+V LR
Sbjct: 293 GPYILIQGSVPGARKRLVVLR 313

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>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P|
          Length = 334

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 40/109 (36%), Positives = 56/109 (51%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RV  TV + GQ GYH RTE+NK++  I   G E               TP GGFP+YG V
Sbjct: 243 RVRSTVPQQGQTGYHQRTELNKRLIDIND-GDEP--------------TPDGGFPNYGEV 287

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 190
              Y ++KG   GP++R+V  R ++    S     E+  ++V T+S  G
Sbjct: 288 DGPYTLVKGSVPGPEQRLVRFRPAVRPNESPRLDPEV--RYVSTASNQG 334

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>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P|
          Length = 331

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 39/108 (36%), Positives = 55/108 (50%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V  TV +AGQ GY  RT  N +V K  K      DA T        I   GGF HYG+VK
Sbjct: 237 VRNTVPQAGQMGYQQRTISNVRVLKYSK----GEDADT--------INVRGGFLHYGLVK 284

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 190
            DY+++ G   GP KR++ +R    ++     ++ +KL ++   SK G
Sbjct: 285 NDYVLLFGSVPGPAKRLIKMRDPARQKVP--DIDNVKLDYISLESKQG 330

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>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)|
          Length = 337

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 33/85 (38%), Positives = 45/85 (52%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           RV  TV + GQ GYH RTE+NK++  IG+  + T D               GGF +YG V
Sbjct: 246 RVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD---------------GGFVNYGEV 290

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSL 262
              Y ++KG   GP KR+V  R ++
Sbjct: 291 DGPYTLVKGSVPGPDKRLVRFRPAV 315

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>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P|
          Length = 351

 Score = 60.1 bits (144), Expect = 4e-09
 Identities = 32/81 (39%), Positives = 46/81 (56%)
 Frame = -2

Query: 510 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 331
           SYT  + GQ G+H RTE NK++ KIG                 K+I P GGF  YG+V+ 
Sbjct: 262 SYT-PQPGQLGFHRRTEYNKRIIKIGD--------------EPKEINPAGGFVRYGIVRN 306

Query: 330 DYLMIKGCCVGPKKRVVTLRQ 268
            Y++++G  +G KKR + LR+
Sbjct: 307 TYVLLEGSILGSKKRPIFLRE 327

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>RL3_SULTO (Q975I1) 50S ribosomal protein L3P|
          Length = 343

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 37/104 (35%), Positives = 54/104 (51%)
 Frame = -2

Query: 501 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 322
           V + GQ GYH RTE NK++ KI     E              I P GGF +YG+V+  YL
Sbjct: 256 VPQPGQMGYHRRTEYNKRILKISDDPNE--------------INPKGGFVNYGIVRNTYL 301

Query: 321 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 190
           +I+G  +G KKR + LR  +  + S +     K+ +V+  S+ G
Sbjct: 302 IIEGSIIGAKKRPLFLRYPI--RPSWIPQSAPKITYVNLYSQQG 343

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>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P|
          Length = 331

 Score = 58.9 bits (141), Expect = 8e-09
 Identities = 38/108 (35%), Positives = 54/108 (50%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 334
           V  TV +AGQ G+  RT  N +V K G           E D     I   GGF HYG VK
Sbjct: 237 VRNTVPQAGQMGFQQRTISNVRVIKYGN--------KEEVD----SINVRGGFLHYGFVK 284

Query: 333 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 190
            DY+++ G   G  KR++ +R    ++     +EE+KL+++   SK G
Sbjct: 285 NDYVLLFGSIPGASKRLIKMRDPARQKVP--DIEEVKLEYISLESKQG 330

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>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P|
          Length = 342

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 35/104 (33%), Positives = 54/104 (51%)
 Frame = -2

Query: 501 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 322
           V + GQ G+H RTE NK++ KIG                  +I P GG  +YG+VK  YL
Sbjct: 255 VPQPGQLGFHRRTEYNKRIIKIGD--------------NVNEINPAGGIVNYGLVKNTYL 300

Query: 321 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 190
           +I+G  +G +KR + LR  +    S  +    K+ +V+ +S+ G
Sbjct: 301 VIEGSVLGSRKRPLFLRYPIRPSWSPESAP--KITYVNLASQQG 342

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>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P|
          Length = 344

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
 Frame = -2

Query: 495 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 316
           +AGQ G+H RTE NK++  I   G +              +TP GGF  YGVV++ ++M+
Sbjct: 254 QAGQTGFHRRTEYNKRILMIDDDGYK--------------VTPAGGFLRYGVVRSTFVML 299

Query: 315 KGCCVGPKKRVVTLRQSLL--KQTSRLALEEIKLKFVDTSSKFG 190
            G   G  KR + +R ++   +   +L + + ++ ++  +SK G
Sbjct: 300 SGSIPGTPKRPIVMRWAIRPPEWYLKLGVRKPEITYISLASKQG 343

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>RL3_NANEQ (P60458) 50S ribosomal protein L3P|
          Length = 321

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 31/98 (31%), Positives = 48/98 (48%)
 Frame = -2

Query: 516 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 337
           R+  TV   GQ GYH RTE NK + KIG                 + +   GG+  YG V
Sbjct: 233 RIFPTVPMPGQMGYHRRTEYNKLIIKIG-----------------EPLNVEGGWVRYGQV 275

Query: 336 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 223
               +++KG   GP+KR++ LR+++     +  +E I+
Sbjct: 276 IGPTILLKGSVPGPRKRLIILREAIRPPRKQEKVEGIE 313

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>RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
 Frame = +1

Query: 79  VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 234
           + H+ F   +++T+++LR+S+ L+  I+ L   G  E A      P++   + K   DF 
Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233

Query: 235 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 408
           Q    G + + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

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>RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
 Frame = +1

Query: 79  VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 234
           + H+ F   +++T+++LR+S+ L+  I+ L   G  E A      P++   + K   DF 
Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233

Query: 235 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 408
           Q    G + + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

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>RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
 Frame = +1

Query: 79  VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 234
           + H+ F   +++T+++LR+S  L+  I+ L   G  E A      P++   + K   DF 
Sbjct: 177 IDHLEFYTEEQLTEIVLRTSGILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233

Query: 235 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 408
           Q    G + + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

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>CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (EC 4.6.1.1)|
           (ATP pyrophosphate-lyase) (Adenylyl cyclase) (Fragment)
          Length = 572

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQ-----ETHDASTEFDRTEKDITPMGGFPH 349
           + Y     G + Y        +   +G  GQ     ET+ + +  +R++ D+TP+GG P 
Sbjct: 401 IRYDEVTKGYDYYGQTANTAARTESVGNGGQVLMTCETYHSLSTAERSQFDVTPLGGVPL 460

Query: 348 YGV 340
            GV
Sbjct: 461 RGV 463

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>RL3_MYCPU (Q98PY0) 50S ribosomal protein L3|
          Length = 266

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = -2

Query: 339 VKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 211
           VK + L++KG   GPKK  V +++   K  S+ A++ + L+ V
Sbjct: 182 VKNNILLVKGAVPGPKKGFVVIKECAKKIPSKEAVKLVDLEIV 224

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>IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)|
          Length = 363

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +1

Query: 124 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 273
           SS+++ L I   +L+  L TA  KLG  +  +  D  +     +++QGLA
Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152

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>IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)|
          Length = 363

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +1

Query: 124 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 273
           SS+++ L I   +L+  L TA  KLG  +  +  D  +     +++QGLA
Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152

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>ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor (ICAM-5)|
           (Telencephalin)
          Length = 924

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/66 (24%), Positives = 27/66 (40%)
 Frame = +1

Query: 178 ETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVRE 357
           E+  P     ++  E   L C  RG    G+      + WP+   +  +  G +H +   
Sbjct: 670 ESTCPSHQTWLEGAEASALACAARGRPSPGVRCSREGIPWPEQQRVSREDAGTYHCVATN 729

Query: 358 ATHGSD 375
           A HG+D
Sbjct: 730 A-HGTD 734

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>HEM3_DESVH (Q72AV0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 315

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +1

Query: 118 LRSSSSLELAIEPLL----LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHH 285
           LR  S L LA+ P L    L G ++T + KL  G    E D +   T GL + GLA  HH
Sbjct: 129 LRRQSQL-LALRPDLDIISLRGNVDTRLRKLMDG----EFDAIVMATAGLKRLGLAAPHH 183

Query: 286 TLLWP 300
            +L P
Sbjct: 184 EVLAP 188

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>RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 366

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = +1

Query: 100 KMTQLILRSSSSLELAIEPLL--LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 273
           ++ +++LR+S  L + ++P    ++     + P+L         D+ Q +T+G ++  + 
Sbjct: 216 ELAEIVLRNSKKLNIEVDPTSAGVIADRSRSTPRLANNRLLWVRDYAQSKTKGNVEASVC 275

Query: 274 EGHHTLLWPDTASLDHQVVGLHHTIVR 354
           E    ++  D   LD Q      T++R
Sbjct: 276 EAALDMIGIDHLGLDKQDRNYLDTLMR 302

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>BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA)|
            (Hemidesmosomal plaque protein) (Dystonia musculorum
            protein) (Dystonin)
          Length = 7389

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/55 (32%), Positives = 33/55 (60%)
 Frame = +1

Query: 91   RFDKMTQLILRSSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGL 255
            R+  +T+L    + +LE A++   L G L++   +L   +DK+E++ L  ET+GL
Sbjct: 5516 RYKDITKLSADVAKTLEHALQ---LAGQLQSMHKELCNWLDKVEVELLSYETQGL 5567

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>POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1776

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/85 (21%), Positives = 35/85 (41%)
 Frame = +2

Query: 212  TNLSLISSSARREVCFSRDWRRVTTRFFGPTQHPLIIR*SAFTTP**GKPPMGVMSFSVL 391
            T  +++S+++R +     DWR    R F  +QH                         V 
Sbjct: 1400 TQATIVSNASRSDP----DWRYTVVRIFAKSQH------------------------KVN 1431

Query: 392  SNSVEASWVSCPTLPILYTFLFISV 466
              S+  SW +C TL +++ F+ +++
Sbjct: 1432 DGSIFGSWKACQTLALMHDFVILTL 1456

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>RUVB_ENTFA (Q839T5) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 338

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
 Frame = +1

Query: 79  VSHVRF---DKMTQLILRSSSSLELAI--EPLLLVGGLETAVPKLGRGVDKLELDFLQCE 243
           +SH+ +     + +++LRS+   +  I  E    +       P++   + K   DF Q +
Sbjct: 178 ISHMEYYQEQDLKEIVLRSADIFQTEIFEEGAFEIARRSRGTPRIANRLLKRVRDFAQVQ 237

Query: 244 TRGLLQQGLAEGHHTLLWPDTASLDH 321
           + G + + +A+   TLL  D   LD+
Sbjct: 238 SDGKIDRAIADKALTLLQVDHQGLDY 263

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>LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A chain)|
          Length = 3084

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -2

Query: 420  ETHDASTEFDRTEKDITPMGGFPHYGVVK 334
            ET  A+++ +R EKD+  +GG PH   V+
Sbjct: 2426 ETPGAASDLNRLEKDLIYVGGLPHSKAVR 2454

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>YHES_ECOLI (P63389) Hypothetical ABC transporter ATP-binding protein yheS|
          Length = 637

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 25/99 (25%), Positives = 44/99 (44%)
 Frame = -2

Query: 441 KIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSL 262
           +IG +G+     ST       ++ P+ G    G+ K   L   G     +   +   +S 
Sbjct: 340 RIGLLGRNGAGKSTLIKLLAGELAPVSG--EIGLAKGIKL---GYFAQHQLEYLRADESP 394

Query: 261 LKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 145
           ++  +RLA +E++ K  D    FG    + T+E +RF G
Sbjct: 395 IQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSG 433

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>YHES_ECO57 (P63390) Hypothetical ABC transporter ATP-binding protein yheS|
          Length = 637

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 25/99 (25%), Positives = 44/99 (44%)
 Frame = -2

Query: 441 KIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSL 262
           +IG +G+     ST       ++ P+ G    G+ K   L   G     +   +   +S 
Sbjct: 340 RIGLLGRNGAGKSTLIKLLAGELAPVSG--EIGLAKGIKL---GYFAQHQLEYLRADESP 394

Query: 261 LKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 145
           ++  +RLA +E++ K  D    FG    + T+E +RF G
Sbjct: 395 IQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSG 433

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>CYSA_PSEPK (Q88CL2) Sulfate/thiosulfate import ATP-binding protein cysA (EC|
           3.6.3.25) (Sulfate-transporting ATPase)
          Length = 329

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +1

Query: 133 SLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHHTLLWPDTAS 312
           ++E+A   +++  G+   +   G   D+   DF+        +  L+EGHH L  P   S
Sbjct: 200 AMEVADRIVVMNKGVIEQIGSPGEVYDQPANDFVYHFLGDSNRLALSEGHHVLFRPHEVS 259

Query: 313 LD-HQVVGLHHTIVRE 357
           L  H+  G H   VR+
Sbjct: 260 LSRHETEGHHAAEVRD 275

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>VIT2_PERAM (Q9BPS0) Vitellogenin 2 precursor (Vg-2)|
          Length = 1876

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
 Frame = -2

Query: 336  KADYLMIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFVDTSSK----FGHGRFQT 172
            K  Y  ++     P+  V+  R++L    TS++  E   + F DT  K    +  G+F+ 
Sbjct: 1309 KHQYAHVRVNVTMPQVPVIDYRKALEFDPTSKIQCE---VHFGDTPEKKSKVYFQGKFER 1365

Query: 171  TDEKQRFYGKLKXXXXAQYQLCHFVKTNM*YLV 73
            TDE+++F  +         QLC   + N  YL+
Sbjct: 1366 TDERKKFVAE-----SDMAQLCSAQQNNKNYLL 1393


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,848,499
Number of Sequences: 219361
Number of extensions: 1632787
Number of successful extensions: 4778
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 4562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4724
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result