ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4n11 |
|---|---|
| Clone Library Name | barley_pub |
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 150 bits (380), Expect = 7e-37 Identities = 71/73 (97%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE+VDP Sbjct: 130 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP 189 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 190 LYPGGSFDPLGLA 202
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 150 bits (380), Expect = 7e-37 Identities = 71/73 (97%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE+VDP Sbjct: 130 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP 189 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 190 LYPGGSFDPLGLA 202
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 150 bits (380), Expect = 7e-37 Identities = 71/73 (97%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE+VDP Sbjct: 130 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP 189 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 190 LYPGGSFDPLGLA 202
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 150 bits (380), Expect = 7e-37 Identities = 71/73 (97%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE+VDP Sbjct: 129 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP 188 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 189 LYPGGSFDPLGLA 201
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 150 bits (379), Expect = 9e-37 Identities = 70/73 (95%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AGGPLGE+VDP Sbjct: 130 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP 189 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 190 LYPGGSFDPLGLA 202
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 150 bits (379), Expect = 9e-37 Identities = 70/73 (95%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE++DP Sbjct: 129 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP 188 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 189 LYPGGSFDPLGLA 201
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 150 bits (379), Expect = 9e-37 Identities = 70/73 (95%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AGGPLGE+VDP Sbjct: 128 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP 187 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 188 LYPGGSFDPLGLA 200
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 150 bits (379), Expect = 9e-37 Identities = 70/73 (95%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGE+VDP Sbjct: 128 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDP 187 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 188 LYPGGSFDPLGLA 200
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 150 bits (378), Expect = 1e-36 Identities = 69/73 (94%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGE+VDP Sbjct: 130 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDP 189 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 190 LYPGGSFDPLGLA 202
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 150 bits (378), Expect = 1e-36 Identities = 69/73 (94%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGE+VDP Sbjct: 128 AVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP 187 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 188 LYPGGSFDPLGLA 200
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 150 bits (378), Expect = 1e-36 Identities = 69/73 (94%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGE+VDP Sbjct: 125 AVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP 184 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 185 LYPGGSFDPLGLA 197
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 149 bits (376), Expect = 2e-36 Identities = 69/73 (94%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE++DP Sbjct: 130 AVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP 189 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 190 LYPGGSFDPLGLA 202
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 149 bits (375), Expect = 3e-36 Identities = 69/73 (94%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA+EGYRVAGGPLGE+ DP Sbjct: 130 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDP 189 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 190 LYPGGSFDPLGLA 202
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 149 bits (375), Expect = 3e-36 Identities = 69/73 (94%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIF EGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE++DP Sbjct: 129 AVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP 188 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 189 LYPGGSFDPLGLA 201
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 149 bits (375), Expect = 3e-36 Identities = 68/73 (93%), Positives = 72/73 (98%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYRVAGGPLGE+VDP Sbjct: 128 AVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDP 187 Query: 40 LYPGGSFDPLGXA 2 LYPGG+FDPLG A Sbjct: 188 LYPGGTFDPLGLA 200
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 148 bits (373), Expect = 4e-36 Identities = 68/73 (93%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AGGPLGE+ DP Sbjct: 69 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP 128 Query: 40 LYPGGSFDPLGXA 2 +YPGGSFDPLG A Sbjct: 129 IYPGGSFDPLGLA 141
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 148 bits (373), Expect = 4e-36 Identities = 68/73 (93%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AGGPLGE+ DP Sbjct: 118 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP 177 Query: 40 LYPGGSFDPLGXA 2 +YPGGSFDPLG A Sbjct: 178 IYPGGSFDPLGLA 190
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 147 bits (372), Expect = 6e-36 Identities = 70/73 (95%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG PLGE+VDP Sbjct: 129 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDP 188 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 189 LYPGGSFDPLGLA 201
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 147 bits (371), Expect = 7e-36 Identities = 68/73 (93%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE+ DP Sbjct: 131 AVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDP 190 Query: 40 LYPGGSFDPLGXA 2 +YPGGSFDPLG A Sbjct: 191 IYPGGSFDPLGLA 203
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 146 bits (369), Expect = 1e-35 Identities = 69/73 (94%), Positives = 70/73 (95%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFK GSQIFSEGGL YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE+VDP Sbjct: 127 AVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP 186 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 187 LYPGGSFDPLGLA 199
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 146 bits (369), Expect = 1e-35 Identities = 66/73 (90%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGE+ DP Sbjct: 137 AVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDP 196 Query: 40 LYPGGSFDPLGXA 2 +YPGGSFDPLG A Sbjct: 197 IYPGGSFDPLGLA 209
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 146 bits (368), Expect = 2e-35 Identities = 68/73 (93%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 A WFKAGSQIFS+GGLDYLGNPSLVHAQS+LAIWACQVVLMGAVEGYR+AGGPLGEIVDP Sbjct: 129 AGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDP 188 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 189 LYPGGSFDPLGLA 201
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 146 bits (368), Expect = 2e-35 Identities = 67/73 (91%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGE+ DP Sbjct: 128 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDP 187 Query: 40 LYPGGSFDPLGXA 2 +YPGGSFDPLG A Sbjct: 188 IYPGGSFDPLGLA 200
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 146 bits (368), Expect = 2e-35 Identities = 68/73 (93%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGPLGE+VDP Sbjct: 124 AVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDP 183 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 184 LYPGGSFDPLGLA 196
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 146 bits (368), Expect = 2e-35 Identities = 68/73 (93%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AGGPLGE+VDP Sbjct: 132 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP 191 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 192 LYPGGSFDPLGLA 204
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 146 bits (368), Expect = 2e-35 Identities = 68/73 (93%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AGGPLGE+VDP Sbjct: 131 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP 190 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 191 LYPGGSFDPLGLA 203
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 146 bits (368), Expect = 2e-35 Identities = 68/73 (93%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AGGPLGE+VDP Sbjct: 91 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP 150 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 151 LYPGGSFDPLGLA 163
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 145 bits (367), Expect = 2e-35 Identities = 69/73 (94%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSIL+IWA QV+LMGAVEGYRVAGGPLGEIVDP Sbjct: 127 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDP 186 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 187 LYPGGSFDPLGLA 199
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 145 bits (365), Expect = 4e-35 Identities = 68/73 (93%), Positives = 70/73 (95%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFK GSQIFS+GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG PLGE+VDP Sbjct: 130 AVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDP 189 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 190 LYPGGSFDPLGLA 202
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 145 bits (365), Expect = 4e-35 Identities = 67/73 (91%), Positives = 71/73 (97%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGPLGE+VDP Sbjct: 128 AVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDP 187 Query: 40 LYPGGSFDPLGXA 2 LYPGG+FDPLG A Sbjct: 188 LYPGGAFDPLGLA 200
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 144 bits (364), Expect = 5e-35 Identities = 68/73 (93%), Positives = 70/73 (95%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVW KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLG +VDP Sbjct: 130 AVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDP 189 Query: 40 LYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 190 LYPGGSFDPLGLA 202
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 143 bits (361), Expect = 1e-34 Identities = 65/73 (89%), Positives = 70/73 (95%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGE+ DP Sbjct: 119 AVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDP 178 Query: 40 LYPGGSFDPLGXA 2 +YPGGSFDPLG A Sbjct: 179 IYPGGSFDPLGLA 191
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 143 bits (361), Expect = 1e-34 Identities = 65/73 (89%), Positives = 70/73 (95%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGE+ DP Sbjct: 126 AVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDP 185 Query: 40 LYPGGSFDPLGXA 2 +YPGGSFDPLG A Sbjct: 186 IYPGGSFDPLGLA 198
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 141 bits (356), Expect = 4e-34 Identities = 62/73 (84%), Positives = 70/73 (95%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAG+QIFSEGGLDYLG+P L+HAQSILAIWACQV+LMGA+EGYRVAGGPLGE+ DP Sbjct: 141 AVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDP 200 Query: 40 LYPGGSFDPLGXA 2 +YPGG+FDPLG A Sbjct: 201 IYPGGNFDPLGLA 213
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 141 bits (356), Expect = 4e-34 Identities = 62/73 (84%), Positives = 70/73 (95%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAG+QIFSEGGLDYLG+P L+HAQSILAIWACQV+LMGA+EGYRVAGGPLGE+ DP Sbjct: 141 AVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDP 200 Query: 40 LYPGGSFDPLGXA 2 +YPGG+FDPLG A Sbjct: 201 IYPGGNFDPLGLA 213
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 139 bits (351), Expect = 2e-33 Identities = 64/73 (87%), Positives = 69/73 (94%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRV GGPLGE +DP Sbjct: 128 AVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDP 187 Query: 40 LYPGGSFDPLGXA 2 +YPGG+FDPLG A Sbjct: 188 IYPGGAFDPLGLA 200
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 138 bits (348), Expect = 3e-33 Identities = 65/73 (89%), Positives = 68/73 (93%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIF EGGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRV GGPLGE +D Sbjct: 127 AVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQ 186 Query: 40 LYPGGSFDPLGXA 2 LYPGG+FDPLG A Sbjct: 187 LYPGGAFDPLGLA 199
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 137 bits (344), Expect = 1e-32 Identities = 64/73 (87%), Positives = 68/73 (93%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRV GGPLGE +D Sbjct: 128 AVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDK 187 Query: 40 LYPGGSFDPLGXA 2 +YPGG+FDPLG A Sbjct: 188 IYPGGAFDPLGLA 200
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 136 bits (343), Expect = 1e-32 Identities = 62/73 (84%), Positives = 68/73 (93%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRV GGPLGE +DP Sbjct: 13 AVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDP 72 Query: 40 LYPGGSFDPLGXA 2 LYPG +FDPLG A Sbjct: 73 LYPGDAFDPLGLA 85
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 135 bits (341), Expect = 2e-32 Identities = 63/73 (86%), Positives = 68/73 (93%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRV GGPLGE +DP Sbjct: 127 AVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDP 186 Query: 40 LYPGGSFDPLGXA 2 LYPGG+FDPLG A Sbjct: 187 LYPGGAFDPLGLA 199
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 135 bits (341), Expect = 2e-32 Identities = 62/73 (84%), Positives = 67/73 (91%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 A WFKAGSQIFSEGGLDYLGN SL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGE+ DP Sbjct: 108 ASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDP 167 Query: 40 LYPGGSFDPLGXA 2 +YPGGSFDPL A Sbjct: 168 IYPGGSFDPLALA 180
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 135 bits (340), Expect = 3e-32 Identities = 63/73 (86%), Positives = 68/73 (93%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIF+EGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRV GGPLGE +DP Sbjct: 128 AVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDP 187 Query: 40 LYPGGSFDPLGXA 2 LYPGG+FDPLG A Sbjct: 188 LYPGGAFDPLGLA 200
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 134 bits (337), Expect = 6e-32 Identities = 67/74 (90%), Positives = 68/74 (91%), Gaps = 1/74 (1%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG-GPLGEIVD 44 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAG GPLGE D Sbjct: 128 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAED 187 Query: 43 PLYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 188 LLYPGGSFDPLGLA 201
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 133 bits (334), Expect = 1e-31 Identities = 66/74 (89%), Positives = 68/74 (91%), Gaps = 1/74 (1%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG-GPLGEIVD 44 AVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAG GPLGE D Sbjct: 129 AVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAED 188 Query: 43 PLYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 189 LLYPGGSFDPLGLA 202
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 133 bits (334), Expect = 1e-31 Identities = 66/74 (89%), Positives = 68/74 (91%), Gaps = 1/74 (1%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG-GPLGEIVD 44 AVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAG GPLGE D Sbjct: 129 AVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAED 188 Query: 43 PLYPGGSFDPLGXA 2 LYPGGSFDPLG A Sbjct: 189 LLYPGGSFDPLGLA 202
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 133 bits (334), Expect = 1e-31 Identities = 62/73 (84%), Positives = 67/73 (91%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRV GGPLGE +D Sbjct: 128 AVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDK 187 Query: 40 LYPGGSFDPLGXA 2 +YPGG+FDPLG A Sbjct: 188 IYPGGAFDPLGLA 200
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 132 bits (333), Expect = 2e-31 Identities = 62/73 (84%), Positives = 67/73 (91%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRV GGPLGE +D Sbjct: 100 AVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDK 159 Query: 40 LYPGGSFDPLGXA 2 +YPGG+FDPLG A Sbjct: 160 IYPGGAFDPLGLA 172
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 132 bits (332), Expect = 2e-31 Identities = 60/73 (82%), Positives = 67/73 (91%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAGSQIFSEGGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRV GGPLGE +D Sbjct: 128 AVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDK 187 Query: 40 LYPGGSFDPLGXA 2 +YPGG+FDPLG A Sbjct: 188 IYPGGAFDPLGLA 200
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 132 bits (331), Expect = 3e-31 Identities = 63/70 (90%), Positives = 65/70 (92%) Frame = -2 Query: 217 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPL 38 VWFKAGSQIFSEGGL + GNPSLVHAQSILAIWACQVVLMGAVEGY VAGG LGE+VDPL Sbjct: 128 VWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPL 187 Query: 37 YPGGSFDPLG 8 Y GGSFDPLG Sbjct: 188 YLGGSFDPLG 197
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 131 bits (330), Expect = 4e-31 Identities = 62/73 (84%), Positives = 67/73 (91%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRV GGPLGE +D Sbjct: 126 AVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDK 185 Query: 40 LYPGGSFDPLGXA 2 +YPGG+FDPLG A Sbjct: 186 VYPGGAFDPLGLA 198
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 131 bits (329), Expect = 5e-31 Identities = 60/73 (82%), Positives = 66/73 (90%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAG+QIFSEGGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRV GG LGE +DP Sbjct: 129 AVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDP 188 Query: 40 LYPGGSFDPLGXA 2 L PGG+FDPLG A Sbjct: 189 LLPGGAFDPLGLA 201
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 127 bits (319), Expect = 8e-30 Identities = 61/73 (83%), Positives = 66/73 (90%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIW +V+LMGAVEGYR+A GPLGE+ DP Sbjct: 132 AVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDP 191 Query: 40 LYPGGSFDPLGXA 2 LYP GSFD LG A Sbjct: 192 LYP-GSFDSLGLA 203
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 122 bits (306), Expect = 3e-28 Identities = 58/73 (79%), Positives = 64/73 (87%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFKAG+QIFSEGGLDYLGNPSLVHAQ+I+A A QV+LMG +EGYRV GGP GE +DP Sbjct: 116 AVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDP 175 Query: 40 LYPGGSFDPLGXA 2 LYPG SFDPLG A Sbjct: 176 LYPGESFDPLGLA 188
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 118 bits (295), Expect = 5e-27 Identities = 55/72 (76%), Positives = 63/72 (87%) Frame = -2 Query: 217 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPL 38 VWFKAG+QIFSEGGLDYLG+P+L+HAQ+I+A A QVVLMG +EGYRV GGP GE +DPL Sbjct: 120 VWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPL 179 Query: 37 YPGGSFDPLGXA 2 YPG SFDPLG A Sbjct: 180 YPGESFDPLGLA 191
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 114 bits (286), Expect = 5e-26 Identities = 53/73 (72%), Positives = 62/73 (84%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 A+WFKAG+ IF +GGL+YLGNPSL+HAQ+I+A A QVVLMG VEGYRV GGP GE +DP Sbjct: 137 AIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDP 196 Query: 40 LYPGGSFDPLGXA 2 LYPG +FDPLG A Sbjct: 197 LYPGEAFDPLGLA 209
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 104 bits (259), Expect = 7e-23 Identities = 48/51 (94%), Positives = 50/51 (98%) Frame = -2 Query: 154 SLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGXA 2 SLVHAQSILAIWACQVVLMGAVEGYR+AGGPLGE+VDPLYPGGSFDPLG A Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 202
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 104 bits (259), Expect = 7e-23 Identities = 48/51 (94%), Positives = 50/51 (98%) Frame = -2 Query: 154 SLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGXA 2 SLVHAQSILAIWACQVVLMGAVEGYR+AGGPLGE+VDPLYPGGSFDPLG A Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 202
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 104 bits (259), Expect = 7e-23 Identities = 48/51 (94%), Positives = 50/51 (98%) Frame = -2 Query: 154 SLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGXA 2 SLVHAQSILAIWACQVVLMGAVEGYR+AGGPLGE+VDPLYPGGSFDPLG A Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 200
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 104 bits (259), Expect = 7e-23 Identities = 48/51 (94%), Positives = 50/51 (98%) Frame = -2 Query: 154 SLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGXA 2 SLVHAQSILAIWACQVVLMGAVEGYR+AGGPLGE+VDPLYPGGSFDPLG A Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 200
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 104 bits (259), Expect = 7e-23 Identities = 48/51 (94%), Positives = 50/51 (98%) Frame = -2 Query: 154 SLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGXA 2 SLVHAQSILAIWACQVVLMGAVEGYR+AGGPLGE+VDPLYPGGSFDPLG A Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 51
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 101 bits (251), Expect = 6e-22 Identities = 55/74 (74%), Positives = 61/74 (82%), Gaps = 2/74 (2%) Frame = -2 Query: 217 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP-LGEIVDP 41 VWFKAGSQIFS+GGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+ G P +GE D Sbjct: 128 VWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND- 186 Query: 40 LYPGGS-FDPLGXA 2 LYPGG FDPLG A Sbjct: 187 LYPGGQYFDPLGLA 200
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 100 bits (248), Expect = 1e-21 Identities = 50/56 (89%), Positives = 51/56 (91%), Gaps = 1/56 (1%) Frame = -2 Query: 175 LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG-GPLGEIVDPLYPGGSFDPL 11 LDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAG GPLGE D LYPGGSFDPL Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPL 56
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 99.0 bits (245), Expect = 3e-21 Identities = 54/74 (72%), Positives = 60/74 (81%), Gaps = 2/74 (2%) Frame = -2 Query: 217 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG-GPLGEIVDP 41 VWFKAGSQIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+ G +GE D Sbjct: 131 VWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGND- 189 Query: 40 LYPGGS-FDPLGXA 2 LYPGG FDPLG A Sbjct: 190 LYPGGQYFDPLGLA 203
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 99.0 bits (245), Expect = 3e-21 Identities = 49/74 (66%), Positives = 57/74 (77%), Gaps = 2/74 (2%) Frame = -2 Query: 217 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG--EIVD 44 VWFKAG+QIF++GGL+YLGN SL+HAQSI+A A QVVLMG E YR GG G + +D Sbjct: 115 VWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLD 174 Query: 43 PLYPGGSFDPLGXA 2 LYPGG FDPLG A Sbjct: 175 TLYPGGPFDPLGLA 188
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 67.4 bits (163), Expect = 1e-11 Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 3/54 (5%) Frame = -2 Query: 154 SLVHAQSILAIWACQVVLMGAVEGYR---VAGGPLGEIVDPLYPGGSFDPLGXA 2 +L+HA+S+LAI A QV+LMGAVEGYR A G GE +D LYPGG FDPLG A Sbjct: 4 ALIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLA 57
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 53.5 bits (127), Expect = 1e-07 Identities = 31/73 (42%), Positives = 43/73 (58%) Frame = -2 Query: 220 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP 41 AVWFK G+ + L+Y G ++ +LA+ A +VVL+G E YR+ G + D Sbjct: 145 AVWFKTGALLLDGNTLNYFGKNIPINL--VLAVVA-EVVLLGGAEYYRITNGL--DFEDK 199 Query: 40 LYPGGSFDPLGXA 2 L+PGG FDPLG A Sbjct: 200 LHPGGPFDPLGLA 212
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 34.7 bits (78), Expect = 0.069 Identities = 18/32 (56%), Positives = 20/32 (62%) Frame = +3 Query: 3 AXPRGSKLPPGYSGSTISPSGPPATRYPSTAP 98 A PRG + PPG SG+ PSGP R PS AP Sbjct: 591 AGPRGERGPPGESGAA-GPSGPIGIRGPSGAP 621
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 33.9 bits (76), Expect = 0.12 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 3/74 (4%) Frame = -2 Query: 214 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDP-- 41 W AG EG YLG P +++ I +V+++G +E R +DP Sbjct: 166 WQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVLVVGYIEFQR------NSELDPEK 215 Query: 40 -LYPGGSFDPLGXA 2 +YPGG FDPLG A Sbjct: 216 RIYPGGYFDPLGLA 229
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 33.5 bits (75), Expect = 0.15 Identities = 17/32 (53%), Positives = 20/32 (62%) Frame = +3 Query: 3 AXPRGSKLPPGYSGSTISPSGPPATRYPSTAP 98 A PRG + PPG SG+ PSGP +R PS P Sbjct: 585 AGPRGERGPPGESGAA-GPSGPIGSRGPSGPP 615
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 32.3 bits (72), Expect = 0.34 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +3 Query: 3 AXPRGSKLPPGYSGSTISPSGPPATRYPSTAP 98 A PRG + PPG SG+ P+GP +R PS P Sbjct: 585 AGPRGERGPPGESGAA-GPTGPIGSRGPSGPP 615
>BSH_MOUSE (Q810B3) Brain-specific homeobox protein homolog| Length = 232 Score = 30.4 bits (67), Expect = 1.3 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 203 RLPDLQRGWPRLPRQS*LGPRAEHPCHLG 117 R+P L G+P +P + L P A HP H G Sbjct: 48 RVPLLDYGYPLMPTPTLLTPHAHHPLHKG 76
>DIG1_CAEEL (Q09165) Mesocentin precursor| Length = 13100 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPPATRYPSTAPMS 104 P G+ LP SG+ I P G P PS P+S Sbjct: 10369 PDGTPLPTDASGAVIGPDGEPIPTDPSGKPLS 10400 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPPATRYPSTAPMS 104 P G+ LP SG+ I P G P PS P+S Sbjct: 8606 PDGTPLPTDASGAVIGPDGEPIPTDPSGKPLS 8637 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPPATRYPSTAPMS 104 P G+ LP SG+ I P G P PS P+S Sbjct: 7832 PDGTPLPTDASGAVIGPDGEPIPTDPSGKPLS 7863 Score = 28.1 bits (61), Expect = 6.4 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPPATRYPSTAPMS 104 P GS LP SG+ I P G P S P+S Sbjct: 10224 PDGSPLPTDASGAAIGPDGEPIPTDSSGRPIS 10255 Score = 28.1 bits (61), Expect = 6.4 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPPATRYPSTAPMS 104 P GS LP SG+ I P G P S P+S Sbjct: 8461 PDGSPLPTDASGAAIGPDGEPIPTDSSGRPIS 8492 Score = 28.1 bits (61), Expect = 6.4 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPPATRYPSTAPMS 104 P GS LP SG+ I P G P S P+S Sbjct: 7687 PDGSPLPTDASGAAIGPDGEPIPTDSSGRPIS 7718 Score = 27.7 bits (60), Expect = 8.4 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPPATRYPSTAPMS 104 P G+ LP SG++I P G P S P+S Sbjct: 10657 PDGTPLPTDASGASIGPDGEPIPTDASGKPLS 10688 Score = 27.7 bits (60), Expect = 8.4 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPPATRYPSTAPMS 104 P G+ LP SG+ I P+G P S P+S Sbjct: 9650 PDGTPLPTDASGAVIGPNGEPIPTDASGKPLS 9681 Score = 27.7 bits (60), Expect = 8.4 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPPATRYPSTAPMS 104 P G+ LP SG+ I P G P S P+S Sbjct: 8875 PDGTPLPTDVSGAVIGPDGEPIPTDASGKPLS 8906 Score = 27.7 bits (60), Expect = 8.4 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPPATRYPSTAPMS 104 P G+ LP SG+ I P+G P S P+S Sbjct: 7113 PDGTPLPTDASGAVIGPNGEPIPTDASGKPLS 7144
>ARLY_BIFLO (Q8G5F3) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 490 Score = 30.4 bits (67), Expect = 1.3 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Frame = +2 Query: 20 EAATGV*WVDDLSEWATSNAVPLDSAHEHD-----LASPDGKDALRVDQARIAEVVEATL 184 EA TG D++EW N VP AHE LA G++ + E A L Sbjct: 366 EAPTGFALATDIAEWLVKNGVPFRHAHELSGACVKLAEGRGQELWDLTDNDFIETFAAFL 425 Query: 185 AEDLGAGL 208 D G+ Sbjct: 426 PADKAPGV 433
>YGLK_STRGR (Q9F1V8) Hypothetical 47.6 kDa protein in glk 3'region| Length = 437 Score = 29.6 bits (65), Expect = 2.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = +3 Query: 15 GSKLPPGYSGSTISPSGPPATRYPSTAPMSTTWQAQMARMLCAWTKLG 158 G LP +G + P P A AP + W A + R+LC LG Sbjct: 45 GRPLPSPPAGLSFGPPSPAAPPTDVPAPEAPGWGADLERLLCGPHGLG 92
>FOSL1_MOUSE (P48755) Fos-related antigen 1 (FRA-1)| Length = 273 Score = 29.6 bits (65), Expect = 2.2 Identities = 14/26 (53%), Positives = 14/26 (53%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPPATRYP 86 P G K PG SGST S PPA P Sbjct: 175 PEGDKKDPGGSGSTSGASSPPAPGRP 200
>EPS8_HUMAN (Q12929) Epidermal growth factor receptor kinase substrate 8| Length = 822 Score = 29.3 bits (64), Expect = 2.9 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +3 Query: 45 STISPSGPPATRYPSTAPMSTTWQAQMARMLCAWT 149 S PS PP R P+ AP T Q + + AW+ Sbjct: 203 SNADPSIPPPPRAPAPAPPGTVTQVDVRSRVAAWS 237
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 29.3 bits (64), Expect = 2.9 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +1 Query: 58 RVGHQQRGTPRQRP*ARPGKPR 123 R G Q+ G P QRP RPG PR Sbjct: 196 RPGGQRPGAPAQRPGGRPGGPR 217
>RNF31_MOUSE (Q924T7) RING finger protein 31| Length = 1066 Score = 29.3 bits (64), Expect = 2.9 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPPATRYPSTAPMSTTWQAQMARMLCAWTKLGLPR*SRPPSL 188 P+G K+P G GS + P A S T++ + A +LCA + PR ++PPSL Sbjct: 322 PKGCKVP-GIEGSHGTGGLEPEPARDQWACQSCTFENEAAAVLCAICE--RPRLAQPPSL 378 Query: 189 KI 194 + Sbjct: 379 VV 380
>XYNB_CALSA (P23552) Beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan| xylohydrolase) (Xylan 1,4-beta-xylosidase) Length = 488 Score = 28.5 bits (62), Expect = 4.9 Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 8/58 (13%) Frame = +2 Query: 41 WVDDLSEWATSNAVPLD--SAHEH--DLA---SPDGKDAL-RVDQARIAEVVEATLAE 190 W+ +L ++ T N VP+D S H++ DLA S + ++A+ + + +AE V+ L E Sbjct: 208 WIPELKDFCTKNGVPIDFISTHQYPTDLAFSTSSNMEEAMAKAKRGELAERVKKALEE 265
>TS101_RAT (Q6IRE4) Tumor susceptibility gene 101 protein| Length = 391 Score = 28.5 bits (62), Expect = 4.9 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 4/31 (12%) Frame = +3 Query: 27 PPGYSGSTISPSGP-PAT---RYPSTAPMST 107 P GY G P+GP PAT +YPS P++T Sbjct: 183 PSGYPGCPYPPAGPYPATTSSQYPSQPPVTT 213
>TS101_MOUSE (Q61187) Tumor susceptibility gene 101 protein| Length = 391 Score = 28.5 bits (62), Expect = 4.9 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 4/31 (12%) Frame = +3 Query: 27 PPGYSGSTISPSGP-PAT---RYPSTAPMST 107 P GY G P+GP PAT +YPS P++T Sbjct: 183 PSGYPGCPYPPAGPYPATTSSQYPSQPPVTT 213
>NTP2_MCV1 (Q98218) Nucleoside triphosphatase II (EC 3.6.1.15) (NTPase II)| (Nucleoside triphosphate phosphohydrolase II) (NPH II) Length = 684 Score = 28.5 bits (62), Expect = 4.9 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = +2 Query: 80 VPLDSAHEHDLASPDGKDALRVDQARIAEVV--EATLAED 193 V LD HEHD + LRV +AR+ +V ATL +D Sbjct: 305 VILDEVHEHDQMADIMLAVLRVHRARVDSIVLMSATLEDD 344
>V03_BPT7 (P03775) Gene 0.3 protein| Length = 117 Score = 28.1 bits (61), Expect = 6.4 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 14/62 (22%) Frame = +2 Query: 50 DLSEWATSNAVP--------------LDSAHEHDLASPDGKDALRVDQARIAEVVEATLA 187 D A NAVP +D E PD KD +R+ QARI E + L Sbjct: 36 DAIHMAADNAVPHYYADIFSVMASEGIDLEFEDSGLMPDTKDVIRILQARIYEQLTIDLW 95 Query: 188 ED 193 ED Sbjct: 96 ED 97
>FHAB_BORPE (P12255) Filamentous hemagglutinin| Length = 3590 Score = 28.1 bits (61), Expect = 6.4 Identities = 18/44 (40%), Positives = 24/44 (54%) Frame = +2 Query: 77 AVPLDSAHEHDLASPDGKDALRVDQARIAEVVEATLAEDLGAGL 208 AV DS S G+DA+RVDQAR + + +L + GA L Sbjct: 807 AVGADSLGSDGAISVSGRDAVRVDQAR--SLADISLGAEGGATL 848
>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 28.1 bits (61), Expect = 6.4 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 5/29 (17%) Frame = +3 Query: 27 PPGYSGST-----ISPSGPPATRYPSTAP 98 PPG G T + P GPP R PS AP Sbjct: 1237 PPGEKGETGDVGQMGPPGPPGPRGPSGAP 1265
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 28.1 bits (61), Expect = 6.4 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 5/29 (17%) Frame = +3 Query: 27 PPGYSGST-----ISPSGPPATRYPSTAP 98 PPG G T + P GPP R PS AP Sbjct: 1237 PPGEKGETGDVGQMGPPGPPGPRGPSGAP 1265
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 28.1 bits (61), Expect = 6.4 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 5/29 (17%) Frame = +3 Query: 27 PPGYSGST-----ISPSGPPATRYPSTAP 98 PPG G T + P GPP R PS AP Sbjct: 1235 PPGEKGETGDVGQMGPPGPPGPRGPSGAP 1263
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 28.1 bits (61), Expect = 6.4 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 5/29 (17%) Frame = +3 Query: 27 PPGYSGST-----ISPSGPPATRYPSTAP 98 PPG G T + P GPP R PS AP Sbjct: 1235 PPGEKGETGDVGQMGPPGPPGPRGPSGAP 1263
>ARLY_COREF (Q8FTM8) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 477 Score = 28.1 bits (61), Expect = 6.4 Identities = 21/64 (32%), Positives = 31/64 (48%) Frame = +2 Query: 23 AATGV*WVDDLSEWATSNAVPLDSAHEHDLASPDGKDALRVDQARIAEVVEATLAEDLGA 202 A G DL+EW VP AHE A +R+ + R ++V+ T E+L A Sbjct: 368 APAGYTLATDLAEWMVREGVPFREAHEASGA------CVRIAEGRGVDLVDLT-DEEL-A 419 Query: 203 GLEP 214 G++P Sbjct: 420 GVDP 423
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 28.1 bits (61), Expect = 6.4 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +3 Query: 24 LPPGYSGSTISPSG-PPATRYPSTAPMSTTWQAQMARMLCAWT 149 LPP + S ++ + PP+ P+ +P STT LC WT Sbjct: 1747 LPPTTTSSPLTTTPLPPSITPPTFSPFSTTTPTTPCVPLCNWT 1789
>COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor| Length = 3119 Score = 28.1 bits (61), Expect = 6.4 Identities = 17/40 (42%), Positives = 19/40 (47%) Frame = +1 Query: 31 RGIVGRRSLRVGHQQRGTPRQRP*ARPGKPRWQGCSARGP 150 +G G R L +RGT Q P PG P QG S GP Sbjct: 2975 QGPPGERGLPGEKGERGTGSQGPRGPPGPPGPQGESRTGP 3014
>EPS8_PONPY (Q5R4H4) Epidermal growth factor receptor kinase substrate 8| Length = 822 Score = 27.7 bits (60), Expect = 8.4 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = +3 Query: 45 STISPSGPPATRYPSTAPMSTTWQAQMARMLCAWT 149 S P PP R P+ AP T Q + + AW+ Sbjct: 203 SNADPGIPPPPRAPAPAPPGTVTQVDVRSRVAAWS 237
>USH2A_MOUSE (Q2QI47) Usherin precursor (Usher syndrome type-2A protein homolog)| (Usher syndrome type IIa protein homolog) Length = 5193 Score = 27.7 bits (60), Expect = 8.4 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +3 Query: 69 PATRYPSTAPMSTTWQAQMARMLCAWTKLGLPR*SRPPSLKIWEP 203 P+T+Y + T+ +R AWTK P PP+L I P Sbjct: 4405 PSTQYNISLVACTSGGCTASRTTSAWTKEAPPENMDPPTLHITGP 4449
>HDA1B_XENLA (O42227) Probable histone deacetylase 1-B (HD1) (RPD3 homolog)| Length = 480 Score = 27.7 bits (60), Expect = 8.4 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Frame = +2 Query: 77 AVPLDSAH----EHDLASPDGKDALRVDQARIAEVVEATLAEDLGAG 205 A+P DS H E D PD + ++R RIA E + +ED G G Sbjct: 383 AIPEDSVHDDSGEEDEEDPDKRISIRSSDKRIACDEEFSDSEDEGEG 429
>DPY7_CAEEL (P34688) Cuticle collagen dpy-7 precursor (Protein dumpy-7)| Length = 318 Score = 27.7 bits (60), Expect = 8.4 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +3 Query: 9 PRGSKLPPGYSGSTISPSGPP 71 PRG K PPG +G SGPP Sbjct: 222 PRGPKGPPGSNGLPSQNSGPP 242
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 27.7 bits (60), Expect = 8.4 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = -2 Query: 214 WFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPL 38 W KA GG YLG P V ++ I A + + + VE R + Sbjct: 113 WVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQRSMEK---DSEKKK 167 Query: 37 YPGGSFDPLG 8 YPGG+FDPLG Sbjct: 168 YPGGAFDPLG 177 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,315,790 Number of Sequences: 219361 Number of extensions: 695081 Number of successful extensions: 3663 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 3373 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3653 length of database: 80,573,946 effective HSP length: 49 effective length of database: 69,825,257 effective search space used: 1675806168 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
