>SNF7_CANGA (Q6FW96) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 228

 Score = 36.2 bits (82), Expect = 0.075
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 601 DDVDKTMDEINEQTENMKQIQDALSAPL 518
           D VD+TMDEI EQ E  ++I DA+S PL
Sbjct: 122 DRVDETMDEIREQVELGEEISDAISRPL 149

>SNF7_YEAST (P39929) Vacuolar sorting protein SNF7 (DOA4-independent|
           degradation protein 1) (Vacuolar protein
           sorting-associated protein VPS32)
          Length = 240

 Score = 35.8 bits (81), Expect = 0.098
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = -3

Query: 601 DDVDKTMDEINEQTENMKQIQDALSAPL 518
           D VD+TMDEI EQ E   +I DA+S PL
Sbjct: 124 DKVDETMDEIREQVELGDEISDAISRPL 151

>SNF7_CANAL (Q5ABD0) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 226

 Score = 33.9 bits (76), Expect = 0.37
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 601 DDVDKTMDEINEQTENMKQIQDALSAPLG 515
           D V+ TMDEI EQ E   +I +A+S P+G
Sbjct: 122 DKVEDTMDEIREQVELADEISEAISRPVG 150

>CHM4A_HUMAN (Q9BY43) Charged multivesicular body protein 4a|
           (Chromatin-modifying protein 4a) (CHMP4a) (Vacuolar
           protein sorting 7-1) (SNF7-1) (hSnf-1) (SNF7 homolog
           associated with Alix-2)
          Length = 222

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 601 DDVDKTMDEINEQTENMKQIQDALSAPLG 515
           D VD+ M +I EQ E  +QI DA+S P+G
Sbjct: 123 DKVDELMTDITEQQEVAQQISDAISRPMG 151

>SNF7_ASHGO (Q753W3) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 237

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -3

Query: 595 VDKTMDEINEQTENMKQIQDALSAPL 518
           VD+TMDEI EQ E  ++I +A+S PL
Sbjct: 125 VDETMDEIREQVELGEEISEAISRPL 150

>SNF7_DEBHA (Q6BSH2) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 226

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -3

Query: 601 DDVDKTMDEINEQTENMKQIQDALSAPLG 515
           D V+ TMD+I EQ E   +I +A+S P+G
Sbjct: 121 DKVENTMDDIREQVELADEISEAISRPVG 149

>SNF7_CRYNE (Q5KL29) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 220

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -3

Query: 601 DDVDKTMDEINEQTENMKQIQDALSAPLG 515
           + VD TMD+I EQ +    I DA+S P+G
Sbjct: 122 EGVDATMDKIREQMDLTNDISDAISNPVG 150

>CHM4C_BRARE (Q6IQ73) Charged multivesicular body protein 4c|
           (Chromatin-modifying protein 4c) (CHMP4c)
          Length = 224

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -3

Query: 601 DDVDKTMDEINEQTENMKQIQDALSAPLG 515
           D VD  M +I EQ E  ++I DA+S P+G
Sbjct: 124 DKVDDLMQDITEQQELAQEISDAISRPVG 152

>CHM4B_BRARE (Q7ZVC4) Charged multivesicular body protein 4b|
           (Chromatin-modifying protein 4b) (CHMP4b)
          Length = 220

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -3

Query: 601 DDVDKTMDEINEQTENMKQIQDALSAPLG 515
           D VD+ M +I EQ E  ++I DA+S P+G
Sbjct: 124 DKVDELMQDIIEQQELAQEISDAISKPVG 152

>AXN_DROME (Q9V407) Axin (Axis inhibition protein) (dAxin) (d-Axin)|
          Length = 745

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 253 SSQPFVHFTSSFTGGLITMPFQLAVQQAHPPQ 348
           S QP   F+SS +GG I++P Q     A PP+
Sbjct: 634 SQQPLASFSSSSSGGSISLPHQPPPLPAKPPE 665

>AT1A2_HUMAN (P50993) Sodium/potassium-transporting ATPase alpha-2 chain|
           precursor (EC 3.6.3.9) (Sodium pump 2) (Na+/K+ ATPase 2)
          Length = 1020

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 335 LILLSRGFLXSRASWLRLAWDRRRMN 412
           +IL   GFL SR   +RL WD R MN
Sbjct: 868 VILAENGFLPSRLLGIRLDWDDRTMN 893


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,241,174
Number of Sequences: 219361
Number of extensions: 1427996
Number of successful extensions: 3977
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3974
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)