ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4l04 |
|---|---|
| Clone Library Name | barley_pub |
>F26_YEAST (P32604) Fructose-2,6-bisphosphatase (EC 3.1.3.46)| Length = 452 Score = 113 bits (282), Expect = 5e-25 Identities = 57/120 (47%), Positives = 78/120 (65%) Frame = -1 Query: 631 KIQWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVI 452 K+QW+ALDE++ GVCDG ++R DK YRY GESY DV+ RLEPVI Sbjct: 294 KLQWKALDELDAGVCDGMTYEEIEKEYPEDFKARDNDKYEYRYRGGESYRDVVIRLEPVI 353 Query: 451 IELERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEIQMGVTGVEEKRYK 272 +ELERQ V++I+HQAVLR +Y+YF + P E P M +PLHT+I+++ G + + K Sbjct: 354 MELERQE-NVLIITHQAVLRCIYAYFMNVPQEESPWMSIPLHTLIKLEPRAYGTKVTKIK 412
>F26_CAEEL (Q21122) Putative 6PF-2-K/Fru-2,6-P2ASE [Includes:| 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 457 Score = 113 bits (282), Expect = 5e-25 Identities = 53/104 (50%), Positives = 74/104 (71%) Frame = -1 Query: 622 WRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIEL 443 W+ALDE++ G+C+G + R DK YRYP GESY DV+ RLEPVI+EL Sbjct: 319 WKALDELDAGICEGLTYEDILQRYPKQADDRATDKYHYRYPSGESYEDVVSRLEPVIMEL 378 Query: 442 ERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEI 311 ERQ A V+V+SHQAVLR + +YF DRPL E+P +++PLH+++++ Sbjct: 379 ERQ-ANVLVVSHQAVLRCVLAYFYDRPLSELPYIDIPLHSLVKL 421
>F26_RANCA (Q91309) 6PF-2-K/Fru-2,6-P2ASE liver/muscle isozymes [Includes:| 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 470 Score = 108 bits (270), Expect = 1e-23 Identities = 52/105 (49%), Positives = 72/105 (68%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+AL+EI+ GVC+ R +DK RYRYP+GESY D++QRLEPVI+E Sbjct: 321 QWKALNEIDAGVCEEMTYEEIQDHFPEEFALRDQDKYRYRYPKGESYEDIVQRLEPVIME 380 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEI 311 LERQ V+VI HQAV+R L +YF D+ E+P ++ PLHT++++ Sbjct: 381 LERQE-NVLVICHQAVMRCLLAYFLDKTAEELPYLKCPLHTVLKL 424
>F26L_CHICK (Q91348) 6PF-2-K/Fru-2,6-P2ASE liver isozyme [Includes:| 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 470 Score = 107 bits (268), Expect = 2e-23 Identities = 54/113 (47%), Positives = 73/113 (64%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+AL+EI+ GVC+ R +DK RYRYP+GESY D++QRLEPVI+E Sbjct: 321 QWKALNEIDAGVCEEMTYEEIQERYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIME 380 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEIQMGVTGVE 287 LERQ V+VI HQAV+R L +YF D+ E+P + PLHT++++ G E Sbjct: 381 LERQE-NVLVICHQAVMRCLLAYFLDKSSEELPYLRCPLHTVLKLTPVAYGCE 432
>F261_RAT (P07953) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1| (6PF-2-K/Fru-2,6-P2ASE liver isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 470 Score = 106 bits (265), Expect = 5e-23 Identities = 52/105 (49%), Positives = 72/105 (68%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+AL+EI+ GVC+ R +DK RYRYP+GESY D++QRLEPVI+E Sbjct: 321 QWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIME 380 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEI 311 LERQ V+VI HQAV+R L +YF D+ E+P ++ PLHT++++ Sbjct: 381 LERQE-NVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKL 424
>F261_HUMAN (P16118) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1| (6PF-2-K/Fru-2,6-P2ASE liver isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 471 Score = 106 bits (265), Expect = 5e-23 Identities = 52/105 (49%), Positives = 72/105 (68%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+AL+EI+ GVC+ R +DK RYRYP+GESY D++QRLEPVI+E Sbjct: 322 QWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIME 381 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEI 311 LERQ V+VI HQAV+R L +YF D+ E+P ++ PLHT++++ Sbjct: 382 LERQE-NVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKL 425
>F261_BOVIN (P49872) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1| (6PF-2-K/Fru-2,6-P2ASE liver isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 471 Score = 106 bits (265), Expect = 5e-23 Identities = 52/105 (49%), Positives = 72/105 (68%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+AL+EI+ GVC+ R +DK RYRYP+GESY D++QRLEPVI+E Sbjct: 322 QWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIME 381 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEI 311 LERQ V+VI HQAV+R L +YF D+ E+P ++ PLHT++++ Sbjct: 382 LERQE-NVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKL 425
>F263_RAT (O35552) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3| (6PF-2-K/Fru-2,6-P2ASE brain-type isozyme) (RB2K) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 555 Score = 106 bits (264), Expect = 6e-23 Identities = 52/105 (49%), Positives = 71/105 (67%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+AL+EI+ GVC+ R++DK YRYP GESY D++QRLEPVI+E Sbjct: 317 QWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIME 376 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEI 311 LERQ V+VI HQAVLR L +YF D+ E+P ++ PLHT++++ Sbjct: 377 LERQE-NVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLKL 420
>F263_HUMAN (Q16875) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3| (6PF-2-K/Fru-2,6-P2ASE brain/placenta-type isozyme) (iPFK-2) (NY-REN-56 antigen) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 520 Score = 106 bits (264), Expect = 6e-23 Identities = 52/105 (49%), Positives = 71/105 (67%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+AL+EI+ GVC+ R++DK YRYP GESY D++QRLEPVI+E Sbjct: 317 QWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIME 376 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEI 311 LERQ V+VI HQAVLR L +YF D+ E+P ++ PLHT++++ Sbjct: 377 LERQE-NVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLKL 420
>F264_RAT (P25114) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4| (6PF-2-K/Fru-2,6-P2ASE testis-type isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 468 Score = 106 bits (264), Expect = 6e-23 Identities = 51/105 (48%), Positives = 71/105 (67%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+ L+EI+ GVC+ R +DK RYRYP+GESY D++QRLEPVI+E Sbjct: 319 QWKVLNEIDAGVCEEMTYEEIQDHYPLEFALRDQDKYRYRYPKGESYEDLVQRLEPVIME 378 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEI 311 LERQ V+VI HQAV+R L +YF D+ E+P ++ PLHT++++ Sbjct: 379 LERQE-NVLVICHQAVMRCLLAYFLDKAAEELPYLKCPLHTVLKL 422
>F264_HUMAN (Q16877) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4| (6PF-2-K/Fru-2,6-P2ASE testis-type isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 468 Score = 105 bits (261), Expect = 1e-22 Identities = 50/105 (47%), Positives = 71/105 (67%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+ L+EI+ GVC+ R +DK RYRYP+GESY D++QRLEPVI+E Sbjct: 319 QWKVLNEIDAGVCEEMTYEEIQDNYPLEFALRDQDKYRYRYPKGESYEDLVQRLEPVIME 378 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEI 311 LERQ V+VI HQAV+R L +YF D+ ++P ++ PLHT++++ Sbjct: 379 LERQE-NVLVICHQAVMRCLLAYFLDKAAEQLPYLKCPLHTVLKL 422
>F262_BOVIN (P26285) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2| (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 530 Score = 102 bits (254), Expect = 9e-22 Identities = 54/119 (45%), Positives = 73/119 (61%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+ L+EI+ GVC+ R ++K YRYP GESY D++QRLEPVI+E Sbjct: 320 QWKILNEIDAGVCEEMTYAEIQEQYPDEFALRDEEKYLYRYPGGESYQDLVQRLEPVIME 379 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEIQMGVTGVEEKRYKL 269 LERQ V+VISHQAV+R L +YF D+ E+P + PLHTI ++ G + + KL Sbjct: 380 LERQ-GNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKL 437
>F262_HUMAN (O60825) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2| (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 505 Score = 102 bits (254), Expect = 9e-22 Identities = 54/119 (45%), Positives = 73/119 (61%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+ L+EI+ GVC+ R ++K YRYP GESY D++QRLEPVI+E Sbjct: 320 QWKILNEIDAGVCEEMTYAEIEKRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIME 379 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEIQMGVTGVEEKRYKL 269 LERQ V+VISHQAV+R L +YF D+ E+P + PLHTI ++ G + + KL Sbjct: 380 LERQ-GNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKL 437
>F262_RAT (Q9JJH5) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2| (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) (RH2K) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 557 Score = 98.6 bits (244), Expect = 1e-20 Identities = 50/105 (47%), Positives = 67/105 (63%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+ L+EI+ GVC+ R ++K YRYP GESY D++QRLEPVI+E Sbjct: 323 QWKILNEIDAGVCEEMTYSEIEQRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIME 382 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEI 311 LERQ V+VISHQAV+R L +YF D+ E+P + PLH I ++ Sbjct: 383 LERQ-GNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHIIFKL 426
>F262_MOUSE (P70265) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2| (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 519 Score = 98.2 bits (243), Expect = 2e-20 Identities = 49/105 (46%), Positives = 67/105 (63%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+ L+EI+ GVC+ R ++K YRYP GESY D++QRLEPVI+E Sbjct: 323 QWKILNEIDAGVCEEMTYSEIEQRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIME 382 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEI 311 LERQ ++VISHQAV+R L +YF D+ E+P + PLH I ++ Sbjct: 383 LERQ-GNILVISHQAVMRCLLAYFLDKGADELPYLRCPLHIIFKL 426
>F263_BOVIN (Q28901) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3| (6PF-2-K/Fru-2,6-P2ASE brain/placenta-type isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] (Fragment) Length = 463 Score = 96.3 bits (238), Expect = 7e-20 Identities = 48/105 (45%), Positives = 66/105 (62%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPRGESYLDVIQRLEPVIIE 446 QW+AL+EI+ GVC+ + DK YRYP GESY D++QRLEPVI+E Sbjct: 318 QWKALNEIDAGVCEEMTYEEIKDTYPEEYALAEADKYYYRYPTGESYQDLVQRLEPVIME 377 Query: 445 LERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTIIEI 311 LERQ V+VI HQAV L +YF D+ E+P ++ PLH ++++ Sbjct: 378 LERQE-NVLVICHQAVCVCLLAYFLDKSAEEMPYLKCPLHAVLKL 421
>6P21_YEAST (P40433) 6-phosphofructo-2-kinase 1 (EC 2.7.1.105)| (Phosphofructokinase 2 I) (6PF-2-K 1) Length = 827 Score = 84.7 bits (208), Expect = 2e-16 Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 2/104 (1%) Frame = -1 Query: 625 QWRALDEINXGVCDGXXXXXXXXXXXXXXESRKKDKLRYRYPR--GESYLDVIQRLEPVI 452 Q + LDE++ G DG E R+KDKLRYRYP GESY+DVI RL PVI Sbjct: 491 QMKMLDELSAGDYDGMTYPEIKNNFPEEFEKRQKDKLRYRYPGIGGESYMDVINRLRPVI 550 Query: 451 IELERQRAPVVVISHQAVLRALYSYFADRPLREVPDMEMPLHTI 320 ELER V++I+H+ V RAL YF + + + ++++PLH + Sbjct: 551 TELERIEDNVLIITHRVVARALLGYFMNLSMGIIANLDVPLHCV 594
>LDHA_RAT (P04642) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) Length = 332 Score = 32.7 bits (73), Expect = 0.91 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +3 Query: 315 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 416 S+ VWSG++++G SLK L+ + +A W D+ Sbjct: 197 SVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDV 230
>GAP1_DROME (P48423) GTPase-activating protein (Ras GTPase-activating protein)| Length = 1163 Score = 32.7 bits (73), Expect = 0.91 Identities = 13/42 (30%), Positives = 25/42 (59%) Frame = +2 Query: 362 RPVGKIRVQRSQYGLVGYNDHWCSLPFELDDNRFQPLNHIKV 487 +P+GKI ++R + + + DHW SL D+ Q + +++V Sbjct: 126 KPIGKIAIKREELHMYNHKDHWFSLRPVDQDSEVQGMVNVEV 167
>LDHA_RHIDE (Q9PW58) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 32.3 bits (72), Expect = 1.2 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 315 SIMVWSGISMSGTSLKGLSAKYEYNARSTAW 407 S+ VWSG++++G SL+GL+ K S W Sbjct: 196 SVPVWSGVNVAGVSLQGLNPKMGVEGDSENW 226
>LDHA_MONDO (Q9XT87) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) Length = 331 Score = 31.6 bits (70), Expect = 2.0 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 Query: 315 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 416 S+ VWSG++++G SLK L ++ S W D+ Sbjct: 196 SVPVWSGVNVAGVSLKSLHPALGTDSDSEQWKDV 229
>LDHA_MOUSE (P06151) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) Length = 331 Score = 31.2 bits (69), Expect = 2.6 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +3 Query: 315 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 416 S+ VWSG++++G SLK L+ + +A W ++ Sbjct: 196 SVPVWSGVNVAGVSLKSLNPELGTDADKEQWKEV 229
>DHX34_MOUSE (Q9DBV3) Probable ATP-dependent RNA helicase DHX34 (EC 3.6.1.-)| (DEAH box protein 34) Length = 1145 Score = 30.8 bits (68), Expect = 3.5 Identities = 19/72 (26%), Positives = 35/72 (48%) Frame = -1 Query: 523 DKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFADRPLREVPD 344 D++ R+ + L V+QRL P +R V+++S + SYF+ P+ +VP Sbjct: 281 DEVHERHLHNDFLLGVLQRLLP-----QRPDLKVILMSATINISLFSSYFSHAPVVQVPG 335 Query: 343 MEMPLHTIIEIQ 308 P+ + + Q Sbjct: 336 RLFPITVVYQPQ 347
>NCAP_CCHFV (P27317) Nucleocapsid protein (Nucleoprotein)| Length = 482 Score = 30.4 bits (67), Expect = 4.5 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = +3 Query: 243 TCTSDSQSMSLYLFSSTPVTPICISIMVWSGISMSGTSLKGLSAKYEYNARSTAWWD 413 + T D+Q S+Y + T C I + +S +G KGL +E NA + WD Sbjct: 52 SATDDAQKDSIYASALVEATKFCAPIYECAWVSSTGIVKKGLE-WFEKNAGTIKSWD 107
>LDHA_SCEUN (Q9W7L5) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 30.0 bits (66), Expect = 5.9 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +3 Query: 315 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 416 S+ VWSG++++G SLK L + + W D+ Sbjct: 196 SVPVWSGVNVAGVSLKSLHPEMGADGDKENWKDV 229
>LDHA_ELEMC (O93542) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 30.0 bits (66), Expect = 5.9 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +3 Query: 315 SIMVWSGISMSGTSLKGLSAKYEYNARSTAW 407 S+ VWSG++++G SL+GL+ + S W Sbjct: 196 SVPVWSGLNVAGVSLQGLNPQMGTEGDSENW 226
>LDHA_CAICA (Q98SL2) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 30.0 bits (66), Expect = 5.9 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +3 Query: 315 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 416 S+ VWSG++++G SLK L + +A W ++ Sbjct: 196 SVPVWSGVNVAGVSLKALHPELGTDADKEHWKEV 229
>LDHA_ALLMI (Q9PW06) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 30.0 bits (66), Expect = 5.9 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +3 Query: 315 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 416 S+ VWSG++++G SLK L + +A W ++ Sbjct: 196 SVPVWSGVNVAGVSLKALHPELGTDADKEHWKEV 229
>DHX34_HUMAN (Q14147) Probable ATP-dependent RNA helicase DHX34 (EC 3.6.1.-)| (DEAH box protein 34) Length = 576 Score = 30.0 bits (66), Expect = 5.9 Identities = 19/71 (26%), Positives = 38/71 (53%) Frame = -1 Query: 523 DKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFADRPLREVPD 344 D++ R+ + L V+QRL P +L+ V+++S + SYF++ P+ +VP Sbjct: 279 DEVHERHLHNDFLLGVLQRLLPTRPDLK-----VILMSATINISLFSSYFSNAPVVQVPG 333 Query: 343 MEMPLHTIIEI 311 P+ T+ ++ Sbjct: 334 RLFPI-TVFDV 343
>RPB5_ASHGO (Q757H7) DNA-directed RNA polymerases II 24 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase II subunit 5) Length = 215 Score = 30.0 bits (66), Expect = 5.9 Identities = 18/52 (34%), Positives = 28/52 (53%) Frame = -1 Query: 529 KKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYF 374 +K +L RY ES L IQR++PV + L +R VV I ++ Y+ + Sbjct: 160 EKKELLKRYRLKESQLPRIQRMDPVALYLGLKRGEVVKIIRKSETSGRYASY 211
>LDHA_SCEWO (P79912) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 29.6 bits (65), Expect = 7.7 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = +3 Query: 315 SIMVWSGISMSGTSLKGL 368 S+ VWSG++++G SLKGL Sbjct: 196 SVPVWSGVNVAGVSLKGL 213
>LDHA_BOVIN (P19858) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) Length = 331 Score = 29.6 bits (65), Expect = 7.7 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +3 Query: 315 SIMVWSGISMSGTSLKGLSAKYEYNARSTAW 407 S+ VWSG++++G SLK L + +A W Sbjct: 196 SVPVWSGVNVAGVSLKNLHPELGTDADKEQW 226
>RPB5_KLUMA (Q9P4B9) DNA-directed RNA polymerases II 24 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase II subunit 5) Length = 215 Score = 29.6 bits (65), Expect = 7.7 Identities = 17/52 (32%), Positives = 28/52 (53%) Frame = -1 Query: 529 KKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYF 374 +K +L RY ES L IQR++PV + L +R V+ I ++ Y+ + Sbjct: 160 EKKELLKRYRLKESQLPRIQRMDPVALYLGLKRGEVIKIIRKSETSGRYASY 211
>RPB5_KLULA (Q6CJ62) DNA-directed RNA polymerases II 24 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase II subunit 5) Length = 215 Score = 29.6 bits (65), Expect = 7.7 Identities = 17/52 (32%), Positives = 28/52 (53%) Frame = -1 Query: 529 KKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYF 374 +K +L RY ES L IQR++PV + L +R V+ I ++ Y+ + Sbjct: 160 EKKELLKRYRLKESQLPRIQRMDPVALYLGLKRGEVIKIIRKSETSGRYASY 211
>DPOLA_MOUSE (P33609) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| Length = 1465 Score = 29.6 bits (65), Expect = 7.7 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = +3 Query: 219 GACCCAEPTCTSDSQSMSLYLFSSTPVTPICISIMV 326 G C EPTC S + + L+ + P+ P+C+ ++ Sbjct: 1348 GWLICEEPTCCSRLRRLPLHFSRNGPLCPVCMKAVL 1383
>PPB_LYSEN (Q05205) Alkaline phosphatase precursor (EC 3.1.3.1) (APASE)| Length = 539 Score = 29.6 bits (65), Expect = 7.7 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +3 Query: 318 IMVWSGISMSGTSLKGLSAKYEYNARSTAWWDITTTGA 431 +M W+ S +G +L G K + + RST +D+ GA Sbjct: 462 LMAWNVSSAAGKTLTGAQVKLQVSDRSTGTYDLYRAGA 499 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,365,173 Number of Sequences: 219361 Number of extensions: 1745795 Number of successful extensions: 4732 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4562 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4693 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
