ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaak4k22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YLIF_ECOLI (P75801) Hypothetical membrane protein yliF 30 4.4
2YLIF_ECO57 (Q8X6V3) Hypothetical membrane protein yliF 30 4.4
3MRCKG_HUMAN (Q6DT37) Serine/threonine-protein kinase MRCK gamma ... 29 7.6

>YLIF_ECOLI (P75801) Hypothetical membrane protein yliF|
          Length = 442

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = -1

Query: 423 AALDAHLSALRCRCQPKRVRER--ISRDLVLGAHFCSVLHGGVDYFLLDVALLNTVLN 256
           AAL A +S   C    +RV  R  + ++ ++  HF  VL GG+ +   DV  L ++ N
Sbjct: 236 AALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN 293



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>YLIF_ECO57 (Q8X6V3) Hypothetical membrane protein yliF|
          Length = 442

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = -1

Query: 423 AALDAHLSALRCRCQPKRVRER--ISRDLVLGAHFCSVLHGGVDYFLLDVALLNTVLN 256
           AAL A +S   C    +RV  R  + ++ ++  HF  VL GG+ +   DV  L ++ N
Sbjct: 236 AALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN 293



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>MRCKG_HUMAN (Q6DT37) Serine/threonine-protein kinase MRCK gamma (EC 2.7.11.1)|
           (CDC42-binding protein kinase gamma) (Myotonic dystrophy
           kinase-related CDC42-binding kinase gamma) (Myotonic
           dystrophy protein kinase-like alpha) (MRCK gamma)
           (DMPK-like gamma
          Length = 1551

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 445 CSSLSYYCSTRCPPQCSQVPLP 380
           C +  Y+C T C PQ    P+P
Sbjct: 909 CDACGYFCHTTCAPQAPPCPVP 930


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,763,776
Number of Sequences: 219361
Number of extensions: 1212169
Number of successful extensions: 3154
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3149
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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