ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaak4k22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070194.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
2dbj|AK069848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
3dbj|AK119626.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
4dbj|AK106744.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
6gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome... 103 5e-19
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
8dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
9ref|NM_191091.1| Oryza sativa (japonica cultivar-group), predic... 94 5e-16
10ref|NM_120277.3| Arabidopsis thaliana auxin:hydrogen symporter A... 50 0.007
11emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BA... 50 0.007
12emb|BX829737.1|CNS0A1BL Arabidopsis thaliana Full-length cDNA Co... 50 0.007
13emb|BX829574.1|CNS0A1GI Arabidopsis thaliana Full-length cDNA Co... 50 0.007
14emb|BX832768.1|CNS0A11R Arabidopsis thaliana Full-length cDNA Co... 50 0.007
15gb|BT002925.1| Arabidopsis thaliana clone RAFL15-04-F05 (R20115)... 50 0.007
16gb|BC108459.1| Xenopus laevis cDNA clone MGC:130731 IMAGE:798333... 42 1.7
17gb|AE009156.1| Agrobacterium tumefaciens str. C58 circular chrom... 42 1.7
18gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 42 1.7
19emb|BX537292.5| Zebrafish DNA sequence from clone CH211-213E17 i... 42 1.7
20emb|BX832718.1|CNS0A0X1 Arabidopsis thaliana Full-length cDNA Co... 42 1.7
21dbj|AB025608.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.7
22gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complet... 40 6.6
23gb|AC091624.3| Canis familiaris clone RP81-117B1, complete sequence 40 6.6
24emb|AL731546.4| Human DNA sequence from clone RP11-293L1 on chro... 40 6.6
25emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chro... 40 6.6
26gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosom... 40 6.6
27gb|AC106777.2| Homo sapiens chromosome 5 clone RP11-326M11, comp... 40 6.6
28gb|AC117207.5| Mus musculus BAC clone RP23-278A7 from 8, complet... 40 6.6
29emb|AL929247.5| Zebrafish DNA sequence from clone CH211-152J7 in... 40 6.6
30dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.6 
>dbj|AK070194.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041H12, full
            insert sequence
          Length = 1930

 Score =  184 bits (93), Expect = 2e-43
 Identities = 183/213 (85%)
 Strand = Plus / Minus

                                                                        
Query: 270  ttagaagagcaacgtcaagtagaaaataatccaccccgccatggagaacactgcaaaaat 329
            ||||||||| ||  |||| || ||||||||||| || |||||||||||||| ||||| ||
Sbjct: 1496 ttagaagagtaagctcaaatacaaaataatccatcctgccatggagaacacagcaaagat 1437

                                                                        
Query: 330  gtgcacccagaacaagatcgcggctgattctttcccgcaccctcttaggttggcaacggc 389
            |||||||||||||||||| || || |||||||| || || || || ||||| ||||| ||
Sbjct: 1436 gtgcacccagaacaagatagcagcagattcttttccacagcccctcaggtttgcaacagc 1377

                                                                        
Query: 390  acctgagagcactgaggtgggcatcgagtgctgcagtagtaggacaaacttgaacatttt 449
            |||||| ||||| || |||||||| || ||||||||||| | ||||||||||||||||||
Sbjct: 1376 acctgacagcacagatgtgggcatagaatgctgcagtagcaagacaaacttgaacatttt 1317

                                             
Query: 450  gtcatctttgggaatgaagccgagtttgtcaac 482
            ||||||||| |||||||| || ||||| |||||
Sbjct: 1316 gtcatctttaggaatgaaaccaagtttatcaac 1284
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>dbj|AK069848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034N13, full
            insert sequence
          Length = 1975

 Score =  184 bits (93), Expect = 2e-43
 Identities = 183/213 (85%)
 Strand = Plus / Minus

                                                                        
Query: 270  ttagaagagcaacgtcaagtagaaaataatccaccccgccatggagaacactgcaaaaat 329
            ||||||||| ||  |||| || ||||||||||| || |||||||||||||| ||||| ||
Sbjct: 1472 ttagaagagtaagctcaaatacaaaataatccatcctgccatggagaacacagcaaagat 1413

                                                                        
Query: 330  gtgcacccagaacaagatcgcggctgattctttcccgcaccctcttaggttggcaacggc 389
            |||||||||||||||||| || || |||||||| || || || || ||||| ||||| ||
Sbjct: 1412 gtgcacccagaacaagatagcagcagattcttttccacagcccctcaggtttgcaacagc 1353

                                                                        
Query: 390  acctgagagcactgaggtgggcatcgagtgctgcagtagtaggacaaacttgaacatttt 449
            |||||| ||||| || |||||||| || ||||||||||| | ||||||||||||||||||
Sbjct: 1352 acctgacagcacagatgtgggcatagaatgctgcagtagcaagacaaacttgaacatttt 1293

                                             
Query: 450  gtcatctttgggaatgaagccgagtttgtcaac 482
            ||||||||| |||||||| || ||||| |||||
Sbjct: 1292 gtcatctttaggaatgaaaccaagtttatcaac 1260
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>dbj|AK119626.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H11, full
            insert sequence
          Length = 1737

 Score =  147 bits (74), Expect = 4e-32
 Identities = 137/158 (86%)
 Strand = Plus / Minus

                                                                        
Query: 295  ataatccaccccgccatggagaacactgcaaaaatgtgcacccagaacaagatcgcggct 354
            |||||||| || ||||||||||| || |||||||||||||||||||||||||| || |||
Sbjct: 1451 ataatccatcctgccatggagaagacagcaaaaatgtgcacccagaacaagattgcagct 1392

                                                                        
Query: 355  gattctttcccgcaccctcttaggttggcaacggcacctgagagcactgaggtgggcatc 414
            ||||| || || || ||||||||||| ||||| |||||||| || || || |||||||| 
Sbjct: 1391 gattccttgccacaacctcttaggtttgcaacagcacctgatagtaccgatgtgggcata 1332

                                                  
Query: 415  gagtgctgcagtagtaggacaaacttgaacattttgtc 452
            |||||||||||||  ||||| ||||||||||| |||||
Sbjct: 1331 gagtgctgcagtaacaggacgaacttgaacatcttgtc 1294
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>dbj|AK106744.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B08, full
            insert sequence
          Length = 1705

 Score =  147 bits (74), Expect = 4e-32
 Identities = 137/158 (86%)
 Strand = Plus / Minus

                                                                        
Query: 295  ataatccaccccgccatggagaacactgcaaaaatgtgcacccagaacaagatcgcggct 354
            |||||||| || ||||||||||| || |||||||||||||||||||||||||| || |||
Sbjct: 1416 ataatccatcctgccatggagaagacagcaaaaatgtgcacccagaacaagattgcagct 1357

                                                                        
Query: 355  gattctttcccgcaccctcttaggttggcaacggcacctgagagcactgaggtgggcatc 414
            ||||| || || || ||||||||||| ||||| |||||||| || || || |||||||| 
Sbjct: 1356 gattccttgccacaacctcttaggtttgcaacagcacctgatagtaccgatgtgggcata 1297

                                                  
Query: 415  gagtgctgcagtagtaggacaaacttgaacattttgtc 452
            |||||||||||||  ||||| ||||||||||| |||||
Sbjct: 1296 gagtgctgcagtaacaggacgaacttgaacatcttgtc 1259
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  103 bits (52), Expect = 5e-19
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                            
Query: 295      ataatccaccccgccatggagaacactgcaaaaatgtgcacccagaacaagatcgcggct 354
                |||||||| || ||||||||||| || |||||||||||||||||||||||||| || |||
Sbjct: 23552940 ataatccatcctgccatggagaagacagcaaaaatgtgcacccagaacaagattgcagct 23552999

                                                        
Query: 355      gattctttcccgcaccctcttaggttggcaacggcacctg 394
                ||||| || || || ||||||||||| ||||| |||||||
Sbjct: 23553000 gattccttgccacaacctcttaggtttgcaacagcacctg 23553039



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 406      gtgggcatcgagtgctgcagtagtaggacaaacttgaacattttgtc 452
                |||||||| |||||||||||||  ||||| ||||||||||| |||||
Sbjct: 23553154 gtgggcatagagtgctgcagtaacaggacgaacttgaacatcttgtc 23553200
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>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0095J22, complete sequence
          Length = 151730

 Score =  103 bits (52), Expect = 5e-19
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                         
Query: 295   ataatccaccccgccatggagaacactgcaaaaatgtgcacccagaacaagatcgcggct 354
             |||||||| || ||||||||||| || |||||||||||||||||||||||||| || |||
Sbjct: 90112 ataatccatcctgccatggagaagacagcaaaaatgtgcacccagaacaagattgcagct 90171

                                                     
Query: 355   gattctttcccgcaccctcttaggttggcaacggcacctg 394
             ||||| || || || ||||||||||| ||||| |||||||
Sbjct: 90172 gattccttgccacaacctcttaggtttgcaacagcacctg 90211



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 406   gtgggcatcgagtgctgcagtagtaggacaaacttgaacattttgtc 452
             |||||||| |||||||||||||  ||||| ||||||||||| |||||
Sbjct: 90326 gtgggcatagagtgctgcagtaacaggacgaacttgaacatcttgtc 90372
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                            
Query: 270      ttagaagagcaacgtcaagtagaaaataatccaccccgccatggagaacactgcaaaaat 329
                ||||||||| ||  |||| || ||||||||||| || |||||||||||||| ||||| ||
Sbjct: 34831454 ttagaagagtaagctcaaatacaaaataatccatcctgccatggagaacacagcaaagat 34831395

                                                                            
Query: 330      gtgcacccagaacaagatcgcggctgattctttcccgcaccctcttaggttggcaacggc 389
                |||||||||||||||||| || || |||||||| || || || || ||||| ||||| ||
Sbjct: 34831394 gtgcacccagaacaagatagcagcagattcttttccacagcccctcaggtttgcaacagc 34831335

                     
Query: 390      acctg 394
                |||||
Sbjct: 34831334 acctg 34831330



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                            
Query: 390      acctgagagcactgaggtgggcatcgagtgctgcagtagtaggacaaacttgaacatttt 449
                |||||| ||||| || |||||||| || ||||||||||| | ||||||||||||||||||
Sbjct: 34831145 acctgacagcacagatgtgggcatagaatgctgcagtagcaagacaaacttgaacatttt 34831086

                                                 
Query: 450      gtcatctttgggaatgaagccgagtttgtcaac 482
                ||||||||| |||||||| || ||||| |||||
Sbjct: 34831085 gtcatctttaggaatgaaaccaagtttatcaac 34831053
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>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0454H12
          Length = 161004

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                         
Query: 270   ttagaagagcaacgtcaagtagaaaataatccaccccgccatggagaacactgcaaaaat 329
             ||||||||| ||  |||| || ||||||||||| || |||||||||||||| ||||| ||
Sbjct: 90626 ttagaagagtaagctcaaatacaaaataatccatcctgccatggagaacacagcaaagat 90567

                                                                         
Query: 330   gtgcacccagaacaagatcgcggctgattctttcccgcaccctcttaggttggcaacggc 389
             |||||||||||||||||| || || |||||||| || || || || ||||| ||||| ||
Sbjct: 90566 gtgcacccagaacaagatagcagcagattcttttccacagcccctcaggtttgcaacagc 90507

                  
Query: 390   acctg 394
             |||||
Sbjct: 90506 acctg 90502



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                         
Query: 390   acctgagagcactgaggtgggcatcgagtgctgcagtagtaggacaaacttgaacatttt 449
             |||||| ||||| || |||||||| || ||||||||||| | ||||||||||||||||||
Sbjct: 90317 acctgacagcacagatgtgggcatagaatgctgcagtagcaagacaaacttgaacatttt 90258

                                              
Query: 450   gtcatctttgggaatgaagccgagtttgtcaac 482
             ||||||||| |||||||| || ||||| |||||
Sbjct: 90257 gtcatctttaggaatgaaaccaagtttatcaac 90225
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>ref|NM_191091.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2475

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                        
Query: 392  ctgagagcactgaggtgggcatcgagtgctgcagtagtaggacaaacttgaacattttgt 451
            |||| ||||| || |||||||| || ||||||||||| | ||||||||||||||||||||
Sbjct: 1174 ctgacagcacagatgtgggcatagaatgctgcagtagcaagacaaacttgaacattttgt 1115

                                           
Query: 452  catctttgggaatgaagccgagtttgtcaac 482
            ||||||| |||||||| || ||||| |||||
Sbjct: 1114 catctttaggaatgaaaccaagtttatcaac 1084
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>ref|NM_120277.3| Arabidopsis thaliana auxin:hydrogen symporter AT5G01990 mRNA,
            complete cds
          Length = 1749

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 370  cctcttaggttggcaacggcacctgagagcactgaggtgggcatcgagtgctg 422
            ||||| ||||||||||| || |||||||||||||| || ||||| | ||||||
Sbjct: 1507 cctctaaggttggcaacagctcctgagagcactgatgtaggcattgtgtgctg 1455
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>emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BAC clone T7H20 (ESSA project)
          Length = 87581

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 370  cctcttaggttggcaacggcacctgagagcactgaggtgggcatcgagtgctg 422
            ||||| ||||||||||| || |||||||||||||| || ||||| | ||||||
Sbjct: 8486 cctctaaggttggcaacagctcctgagagcactgatgtaggcattgtgtgctg 8538
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>emb|BX829737.1|CNS0A1BL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB32ZB10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1483

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 370  cctcttaggttggcaacggcacctgagagcactgaggtgggcatcgagtgctg 422
            ||||| ||||||||||| || |||||||||||||| || ||||| | ||||||
Sbjct: 1255 cctctaaggttggcaacagctcctgagagcactgatgtaggcattgtgtgctg 1203
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>emb|BX829574.1|CNS0A1GI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB22ZB07 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1509

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 370  cctcttaggttggcaacggcacctgagagcactgaggtgggcatcgagtgctg 422
            ||||| ||||||||||| || |||||||||||||| || ||||| | ||||||
Sbjct: 1277 cctctaaggttggcaacagctcctgagagcactgatgtaggcattgtgtgctg 1225
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>emb|BX832768.1|CNS0A11R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH9ZF09 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1471

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 370  cctcttaggttggcaacggcacctgagagcactgaggtgggcatcgagtgctg 422
            ||||| ||||||||||| || |||||||||||||| || ||||| | ||||||
Sbjct: 1229 cctctaaggttggcaacagctcctgagagcactgatgtaggcattgtgtgctg 1177
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>gb|BT002925.1| Arabidopsis thaliana clone RAFL15-04-F05 (R20115) At5g01990 mRNA,
            complete sequence
          Length = 1468

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 370  cctcttaggttggcaacggcacctgagagcactgaggtgggcatcgagtgctg 422
            ||||| ||||||||||| || |||||||||||||| || ||||| | ||||||
Sbjct: 1242 cctctaaggttggcaacagctcctgagagcactgatgtaggcattgtgtgctg 1190
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>gb|BC108459.1| Xenopus laevis cDNA clone MGC:130731 IMAGE:7983334, complete cds
          Length = 1620

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 442  aacattttgtcatctttggga 462
            |||||||||||||||||||||
Sbjct: 1526 aacattttgtcatctttggga 1546
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>gb|AE009156.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 182
            of 256 of the complete sequence
          Length = 11936

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 332  gcacccagaacaagatcgcggctga 356
            ||||||||||| |||||||||||||
Sbjct: 8823 gcacccagaaccagatcgcggctga 8799
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 332     gcacccagaacaagatcgcggctga 356
               ||||||||||| |||||||||||||
Sbjct: 2015774 gcacccagaaccagatcgcggctga 2015750
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>emb|BX537292.5| Zebrafish DNA sequence from clone CH211-213E17 in linkage group 10,
            complete sequence
          Length = 189446

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 384  aacggcacctgagagcactga 404
            |||||||||||||||||||||
Sbjct: 6208 aacggcacctgagagcactga 6188
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>emb|BX832718.1|CNS0A0X1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH91ZH10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1331

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 370  cctcttaggttggcaacggcacctgagagcactgaggtgggcatcgagtgctg 422
            ||||| ||||| ||||| || |||||||||||||| || ||||| | ||||||
Sbjct: 1216 cctctaaggtttgcaacagctcctgagagcactgatgtaggcattgtgtgctg 1164
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>dbj|AB025608.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14B15
          Length = 83689

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 219 tgttttctcatggtatctact 239
           |||||||||||||||||||||
Sbjct: 249 tgttttctcatggtatctact 269
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>gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complete sequence
          Length = 216974

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     taataatatgggcaggcaca 30
              ||||||||||||||||||||
Sbjct: 215764 taataatatgggcaggcaca 215745
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>gb|AC091624.3| Canis familiaris clone RP81-117B1, complete sequence
          Length = 174712

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 431  ggacaaacttgaacattttg 450
            ||||||||||||||||||||
Sbjct: 8185 ggacaaacttgaacattttg 8166
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>emb|AL731546.4| Human DNA sequence from clone RP11-293L1 on chromosome 10, complete
             sequence
          Length = 92998

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   ttgtacacttcatgacacta 205
             ||||||||||||||||||||
Sbjct: 52801 ttgtacacttcatgacacta 52782
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>emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chromosome 6, complete
              sequence
          Length = 169159

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    atcttcttccatgttttctc 227
              ||||||||||||||||||||
Sbjct: 109878 atcttcttccatgttttctc 109859
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>gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosome 10, complete
             sequence
          Length = 205283

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   acaaagatgggtacgaggaa 121
             ||||||||||||||||||||
Sbjct: 89458 acaaagatgggtacgaggaa 89477
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>gb|AC106777.2| Homo sapiens chromosome 5 clone RP11-326M11, complete sequence
          Length = 161720

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    taataatatgggcaggcaca 30
             ||||||||||||||||||||
Sbjct: 51602 taataatatgggcaggcaca 51621
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>gb|AC117207.5| Mus musculus BAC clone RP23-278A7 from 8, complete sequence
          Length = 198927

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   taataatatgggcaggcaca 30
            ||||||||||||||||||||
Sbjct: 8254 taataatatgggcaggcaca 8235
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>emb|AL929247.5| Zebrafish DNA sequence from clone CH211-152J7 in linkage group 3,
             complete sequence
          Length = 145564

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 435   aaacttgaacattttgtcatcttt 458
             ||||||||||||| ||||||||||
Sbjct: 21836 aaacttgaacattctgtcatcttt 21859
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>dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT04J15, TM0321,
             complete sequence
          Length = 127049

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   agcaacgtcaagtagaaaat 296
             ||||||||||||||||||||
Sbjct: 80088 agcaacgtcaagtagaaaat 80107


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,470,216
Number of Sequences: 3902068
Number of extensions: 4470216
Number of successful extensions: 85618
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85494
Number of HSP's gapped (non-prelim): 124
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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