ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4k19 |
|---|---|
| Clone Library Name | barley_pub |
>UB72_DEIRA (Q9RV58) Protein DR1172| Length = 298 Score = 29.6 bits (65), Expect = 2.1 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -1 Query: 245 ESVVDAAKDGASKVSETAQDLGGQAKQAAEEAWDATKD 132 E DAA++ S +++ AQD+ G+ K A A KD Sbjct: 62 EKTKDAAQNAGSVIADKAQDVAGEVKSAVAGATAEIKD 99
>LEA76_BRANA (P13934) Late embryogenesis abundant protein 76 (LEA 76)| Length = 280 Score = 29.3 bits (64), Expect = 2.8 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -1 Query: 248 GESVVDAAKDGASKVSETAQDLGGQAKQAAEEAWDAT 138 GE+V A+D A ETAQ+ K+ AE D T Sbjct: 153 GEAVKQKAQDAAQYTKETAQNAAQYTKETAEAGKDKT 189
>PVA_PLAFA (P08116) Processed variable antigen (Fragment)| Length = 224 Score = 28.9 bits (63), Expect = 3.6 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = -1 Query: 266 EGAKSAGESVVDAAKDGASKVSETAQDLGGQAKQAAEEAWDATKD 132 E ++ GE + + DGAS+ SE + L Q + +E+ + TKD Sbjct: 163 EKEENEGEKLGENVNDGASENSEDPKKLTEQEENGTKESSEETKD 207
>LPPX_MYCTU (P65306) Putative lipoprotein lppX precursor| Length = 233 Score = 28.5 bits (62), Expect = 4.7 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 263 GAKSAGESVVDAAKDGASKVSETAQDLGGQAKQAAEEAWD 144 GAKSA + V A+DG+ + + DLG + Q + W+ Sbjct: 188 GAKSARPATVWIAQDGSHHLVRASIDLGSGSIQLTQSKWN 227
>LPPX_MYCBO (P65307) Putative lipoprotein lppX precursor| Length = 233 Score = 28.5 bits (62), Expect = 4.7 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 263 GAKSAGESVVDAAKDGASKVSETAQDLGGQAKQAAEEAWD 144 GAKSA + V A+DG+ + + DLG + Q + W+ Sbjct: 188 GAKSARPATVWIAQDGSHHLVRASIDLGSGSIQLTQSKWN 227
>LEA2_CICAR (O49817) Late embryogenesis abundant protein 2 (CapLEA-2)| Length = 155 Score = 28.5 bits (62), Expect = 4.7 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Frame = -1 Query: 266 EGAKSAGESVVDAAKDGASKVS----ETAQDLGGQAKQAAEEAWDATKD 132 + AK + AAKD + + E AQD G+AK+ E +TK+ Sbjct: 55 QAAKEKTQQTAQAAKDKTQQTTQATKEKAQDTTGRAKEKGSEMGQSTKE 103 Score = 27.7 bits (60), Expect = 8.0 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -1 Query: 245 ESVVDAAKDGASKVSETAQDLGGQAKQAAEEAWDAT 138 E AAK+ A + ++TA+D Q QAA+E T Sbjct: 29 EDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEKTQQT 64
>SYA_CHRVO (Q7NXM2) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 877 Score = 28.1 bits (61), Expect = 6.1 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -1 Query: 260 AKSAGESVVDAAKDGASKVSETAQDLGGQAKQAAEEAWDATKD 132 A SAG+S+ DAA D + V A +L G A E D KD Sbjct: 756 ASSAGDSLADAAAD-INGVKVLAAELPGADNTALRETLDKLKD 797
>AROC_STRR6 (P0A2Y7) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 388 Score = 28.1 bits (61), Expect = 6.1 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +3 Query: 57 RRQMLSSFAHILNRGGDVVGDALRGVLGGVP 149 R Q + + + R GD +G + V+GGVP Sbjct: 196 REQEIKDYIDQIKRDGDTIGGVVETVVGGVP 226
>AROC_STRPN (P0A2Y6) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 388 Score = 28.1 bits (61), Expect = 6.1 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +3 Query: 57 RRQMLSSFAHILNRGGDVVGDALRGVLGGVP 149 R Q + + + R GD +G + V+GGVP Sbjct: 196 REQEIKDYIDQIKRDGDTIGGVVETVVGGVP 226
>SURE_SYNP7 (Q31LH6) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside| 5'-monophosphate phosphohydrolase) Length = 258 Score = 28.1 bits (61), Expect = 6.1 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Frame = +3 Query: 66 MLSSFAHILNRGGDV-----VGDALRGVLGGVPRFLRRLLGLPAEVLRGLAHLARAILGR 230 +LS H N G DV V A+ GV+ G+P L A A +A +L R Sbjct: 93 VLSGINHGPNLGTDVLYSGTVSAAMEGVIEGIPSIALSLASFTARDFEPAAEIAVELLER 152 Query: 231 VHH 239 + H Sbjct: 153 LPH 155
>SURE_SYNP6 (Q5N0F0) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside| 5'-monophosphate phosphohydrolase) Length = 258 Score = 28.1 bits (61), Expect = 6.1 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Frame = +3 Query: 66 MLSSFAHILNRGGDV-----VGDALRGVLGGVPRFLRRLLGLPAEVLRGLAHLARAILGR 230 +LS H N G DV V A+ GV+ G+P L A A +A +L R Sbjct: 93 VLSGINHGPNLGTDVLYSGTVSAAMEGVIEGIPSIALSLASFTARDFEPAAEIAVELLER 152 Query: 231 VHH 239 + H Sbjct: 153 LPH 155
>COATA_BPI22 (P15415) Coat protein A precursor| Length = 434 Score = 28.1 bits (61), Expect = 6.1 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -1 Query: 266 EGAKSAGESVVDAAKDGASKVSETAQDLGGQAKQ 165 E + A SV DA DG V DLGG++ Q Sbjct: 300 EQSAKASASVSDAISDGMRGVGNFVDDLGGESSQ 333
>LEA1_CICAR (O49816) Late embryogenesis abundant protein 1 (CapLEA-1)| Length = 177 Score = 27.7 bits (60), Expect = 8.0 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Frame = -1 Query: 266 EGAKSAGESVVDAAKDGASKVSET----AQDLGGQAKQAAEEAWDATKD 132 + AK + AAKD + +E AQD G+A++ E +TK+ Sbjct: 77 QAAKDETQQTAQAAKDKTQQTTEATKEKAQDTTGRAREKGSEMGQSTKE 125 Score = 27.7 bits (60), Expect = 8.0 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -1 Query: 245 ESVVDAAKDGASKVSETAQDLGGQAKQAAEEAWDAT 138 E AAK+ A + ++TA+D Q QAA+E T Sbjct: 29 EDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEKTQQT 64
>ESXA_MYCTU (P0A564) 6 kDa early secretory antigenic target (ESAT-6)| Length = 94 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/43 (27%), Positives = 23/43 (53%) Frame = -1 Query: 266 EGAKSAGESVVDAAKDGASKVSETAQDLGGQAKQAAEEAWDAT 138 +G ++ S++D K +K++ G +A Q ++ WDAT Sbjct: 18 QGNVTSIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDAT 60
>ESXA_MYCBO (P0A565) 6 kDa early secretory antigenic target (ESAT-6)| Length = 94 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/43 (27%), Positives = 23/43 (53%) Frame = -1 Query: 266 EGAKSAGESVVDAAKDGASKVSETAQDLGGQAKQAAEEAWDAT 138 +G ++ S++D K +K++ G +A Q ++ WDAT Sbjct: 18 QGNVTSIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDAT 60 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,554,468 Number of Sequences: 219361 Number of extensions: 259689 Number of successful extensions: 1146 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1146 length of database: 80,573,946 effective HSP length: 64 effective length of database: 66,534,842 effective search space used: 1596836208 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
