>CCA_LEGPL (Q5WT58) Multifunctional CCA protein [Includes: CCA-adding enzyme|
           (EC 2.7.7.25) (EC 2.7.7.21) (tRNA
           nucleotidyltransferase) (tRNA
           adenylyl-/cytidylyl-transferase) (tRNA
           CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC
           3.1.3.-); 2',3'-cycli
          Length = 410

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -1

Query: 198 KGXTTIRASMXHHGGNSTXPXFQQSQCMIDQKKXFNNFRHAARSSARVHPVLHRSC 31
           K  T I+A   HHG         ++ C   + +  N++R  A + AR H  +HR C
Sbjct: 259 KASTPIQAWPKHHGHEEEGTKLIRALCA--RLRIPNDYRDLAVTVARAHLNIHRVC 312

>CCA_LEGPH (Q5ZRX9) Multifunctional CCA protein [Includes: CCA-adding enzyme|
           (EC 2.7.7.25) (EC 2.7.7.21) (tRNA
           nucleotidyltransferase) (tRNA
           adenylyl-/cytidylyl-transferase) (tRNA
           CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC
           3.1.3.-); 2',3'-cycli
          Length = 410

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -1

Query: 198 KGXTTIRASMXHHGGNSTXPXFQQSQCMIDQKKXFNNFRHAARSSARVHPVLHRSC 31
           K  T I+A   HHG         ++ C   + +  N++R  A + AR H  +HR C
Sbjct: 259 KASTPIQAWPKHHGHEEEGTKLIRALCA--RLRIPNDYRDLAVTVARAHLNIHRLC 312

>FBX28_HUMAN (Q9NVF7) F-box only protein 28|
          Length = 368

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -2

Query: 188 PPSERQXCTMGAIALPXPSSNPNA*LIRKKXSTTSDMPPVVVREFILCYTGVVEPSELDL 9
           PP   Q    G+ ALP P+  P+    +   + T    P+V  E IL +    E S+L L
Sbjct: 34  PPPAPQHPQPGSQALPAPALAPD----QLPQNNTLVALPIVAIENILSFMSYDEISQLRL 89

Query: 8   IC 3
           +C
Sbjct: 90  VC 91


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,229,817
Number of Sequences: 219361
Number of extensions: 382918
Number of successful extensions: 728
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 80,573,946
effective HSP length: 41
effective length of database: 71,580,145
effective search space used: 1717923480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)