ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4k10 |
|---|---|
| Clone Library Name | barley_pub |
>GOX1_ARATH (Q9LRS0) Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 (EC| 1.1.3.15) (Glycolate oxidase 1) (GOX 1) (Short chain alpha-hydroxy acid oxidase 1) Length = 367 Score = 78.6 bits (192), Expect = 1e-14 Identities = 41/58 (70%), Positives = 47/58 (81%) Frame = -2 Query: 521 VVFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGRPLPRM 348 VVFALAAEGEAGV+ VL+M+R+EFELTMAL GC LS+ITR HI TE D R LPR+ Sbjct: 311 VVFALAAEGEAGVKKVLQMLRDEFELTMALSGCRSLSEITRNHIVTEWD-TPRHLPRL 367
>GOX2_ARATH (Q9LRR9) Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 (EC| 1.1.3.15) (Glycolate oxidase 2) (GOX 2) (Short chain alpha-hydroxy acid oxidase 2) Length = 367 Score = 73.2 bits (178), Expect = 4e-13 Identities = 38/58 (65%), Positives = 45/58 (77%) Frame = -2 Query: 521 VVFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGRPLPRM 348 VVF+LAAEGEAGVR VL+M+R+EFELTMAL GC L +I+R HI TE D RP R+ Sbjct: 311 VVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEISRNHITTEWD-TPRPSARL 367
>GOX_SPIOL (P05414) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15)| (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) Length = 369 Score = 69.7 bits (169), Expect = 5e-12 Identities = 33/49 (67%), Positives = 40/49 (81%) Frame = -2 Query: 521 VVFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGD 375 VVF+LAAEGEAGV+ VL+MMR+EFELTMAL GC L +I+R HI + D Sbjct: 311 VVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWD 359
>HAOX1_HUMAN (Q9UJM8) Hydroxyacid oxidase 1 (EC 1.1.3.15) (HAOX1) (Glycolate| oxidase) (GOX) Length = 370 Score = 43.5 bits (101), Expect = 4e-04 Identities = 19/41 (46%), Positives = 29/41 (70%) Frame = -2 Query: 521 VVFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITR 399 +V+ LA +GE GV++VL +++EEF L MAL GC + I + Sbjct: 317 IVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDK 357
>LLDD_PSEPK (Q88DT3) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 381 Score = 43.1 bits (100), Expect = 5e-04 Identities = 18/46 (39%), Positives = 30/46 (65%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTE 381 ++ALA G+AGV+N+L + +E + M L G +S+ITR+ + E Sbjct: 333 LYALAVHGQAGVKNLLELFEKEMRVAMVLTGAKSISEITRDSLVRE 378
>HAOX1_MOUSE (Q9WU19) Hydroxyacid oxidase 1 (EC 1.1.3.15) (HAOX1) (Glycolate| oxidase) (GOX) Length = 370 Score = 43.1 bits (100), Expect = 5e-04 Identities = 18/41 (43%), Positives = 29/41 (70%) Frame = -2 Query: 521 VVFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITR 399 +++ LA +GE GV++VL +++EEF L MAL GC + I + Sbjct: 317 IIWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDK 357
>LLDD_PSEAE (Q9HV37) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 381 Score = 42.7 bits (99), Expect = 6e-04 Identities = 19/46 (41%), Positives = 30/46 (65%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTE 381 V+ALAA GEAGVRN+L ++ +E + M L G + +I+ + + E Sbjct: 333 VYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEISADSLVRE 378
>LLDD_ERWCT (Q6DAY3) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 386 Score = 42.0 bits (97), Expect = 0.001 Identities = 19/43 (44%), Positives = 29/43 (67%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHI 390 V+ALAA GEAGV N+L ++ +E + M L G ++DIT + + Sbjct: 333 VYALAAAGEAGVVNLLNLIEKEMRVAMTLTGAKSIADITSDSL 375
>LLDD_SHISS (Q3YVX0) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 396 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGRPLP 354 ++ALA G+AGV N+L ++ +E ++ M L G +S+IT++ + LG+ LP Sbjct: 333 LYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLV---QGLGKELP 384
>LLDD_SHIFL (Q83PP7) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 396 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGRPLP 354 ++ALA G+AGV N+L ++ +E ++ M L G +S+IT++ + LG+ LP Sbjct: 333 LYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLV---QGLGKELP 384
>LLDD_SHIBS (Q31V17) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 396 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGRPLP 354 ++ALA G+AGV N+L ++ +E ++ M L G +S+IT++ + LG+ LP Sbjct: 333 LYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLV---QGLGKELP 384
>LLDD_ECOLI (P33232) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 396 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGRPLP 354 ++ALA G+AGV N+L ++ +E ++ M L G +S+IT++ + LG+ LP Sbjct: 333 LYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLV---QGLGKELP 384
>LLDD_ECOL6 (Q8FCB1) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 396 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGRPLP 354 ++ALA G+AGV N+L ++ +E ++ M L G +S+IT++ + LG+ LP Sbjct: 333 LYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLV---QGLGKELP 384
>LLDD_ECO57 (Q8XDF7) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 396 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGRPLP 354 ++ALA G+AGV N+L ++ +E ++ M L G +S+IT++ + LG+ LP Sbjct: 333 LYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLV---QGLGKELP 384
>LLDD_YERPS (Q66C32) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 381 Score = 41.6 bits (96), Expect = 0.001 Identities = 18/43 (41%), Positives = 29/43 (67%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHI 390 V+ALA GEAGV N+L ++ +E + M L G +++DI R+ + Sbjct: 333 VYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375
>LLDD_YERPE (Q8ZFV8) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 381 Score = 41.6 bits (96), Expect = 0.001 Identities = 18/43 (41%), Positives = 29/43 (67%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHI 390 V+ALA GEAGV N+L ++ +E + M L G +++DI R+ + Sbjct: 333 VYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375
>HAOX2_HUMAN (Q9NYQ3) Hydroxyacid oxidase 2 (EC 1.1.3.15) (HAOX2)| ((S)-2-hydroxy-acid oxidase, peroxisomal) (Long chain alpha-hydroxy acid oxidase) (Long-chain L-2-hydroxy acid oxidase) Length = 351 Score = 40.8 bits (94), Expect = 0.002 Identities = 17/41 (41%), Positives = 28/41 (68%) Frame = -2 Query: 521 VVFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITR 399 +++ LA +GE GV+ VL ++ EF +MAL GC +++I R Sbjct: 303 ILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINR 343
>HAOX2_MOUSE (Q9NYQ2) Hydroxyacid oxidase 2 (EC 1.1.3.15) (HAOX2)| ((S)-2-hydroxy-acid oxidase, peroxisomal) (Medium chain alpha-hydroxy acid oxidase) (Medium-chain L-2-hydroxy acid oxidase) Length = 353 Score = 40.4 bits (93), Expect = 0.003 Identities = 17/44 (38%), Positives = 30/44 (68%) Frame = -2 Query: 521 VVFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHI 390 +++ LA +GE GV+ VL +++EE MAL GC +++I+ + I Sbjct: 305 IIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEISPDLI 348
>LLDD_SHIDS (Q329P9) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 396 Score = 40.4 bits (93), Expect = 0.003 Identities = 19/55 (34%), Positives = 35/55 (63%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGRPLP 354 ++ALA G+AGV N+L ++ +E ++ M L G +++IT++ + LG+ LP Sbjct: 333 LYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSINEITQDSLV---QGLGKELP 384
>LLDD_SALTY (Q8ZL61) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 396 Score = 40.0 bits (92), Expect = 0.004 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGRPLP 354 ++ALA G+AGV N+L ++ +E ++ M L G +S+I+ + + E LG+ LP Sbjct: 333 LYALATAGKAGVANLLDLIEKEMKVAMTLTGAKSISEISGDSLVQE---LGKSLP 384
>LLDD_SALPA (Q5PLQ7) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 396 Score = 40.0 bits (92), Expect = 0.004 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGRPLP 354 ++ALA G+AGV N+L ++ +E ++ M L G +S+I+ + + E LG+ LP Sbjct: 333 LYALATAGKAGVANLLDLVEKEMKVAMTLTGAKSISEISGDSLVQE---LGKSLP 384
>LLDD_SALCH (Q57ID8) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 396 Score = 39.7 bits (91), Expect = 0.005 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGRPLP 354 ++ALA G+AGV N+L ++ +E ++ M L G +S+I+ + + E LG+ LP Sbjct: 333 LYALATAGKAGVANLLDLIEKEMKVAMTLTGAKTISEISGDSLVQE---LGKSLP 384
>LLDD_HAEDU (Q7VPI9) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 381 Score = 39.3 bits (90), Expect = 0.007 Identities = 18/41 (43%), Positives = 27/41 (65%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITRE 396 V+AL+A G AGV N+L + R+E + M L ++SDI R+ Sbjct: 333 VYALSAAGRAGVENMLDIFRKEMHVAMTLTSNARISDINRD 373
>LLDD_VIBPA (Q87G18) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 379 Score = 38.9 bits (89), Expect = 0.009 Identities = 17/43 (39%), Positives = 29/43 (67%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHI 390 V+ALAA+G AGV N+L + +E + M L G ++D++R+ + Sbjct: 333 VYALAAQGGAGVENLLDLYDKEMRVAMTLTGAKTIADLSRDSL 375
>LLDD_XANAC (Q8PR33) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 388 Score = 38.9 bits (89), Expect = 0.009 Identities = 17/41 (41%), Positives = 28/41 (68%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITRE 396 V+ALAA G+AGV N+L ++ +E + M L G ++DI+ + Sbjct: 333 VYALAAAGQAGVENLLTLIEKEMRVAMTLTGTHSIADISAD 373
>LLDD_VIBCH (Q9KKW6) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 378 Score = 38.9 bits (89), Expect = 0.009 Identities = 15/43 (34%), Positives = 29/43 (67%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHI 390 ++ALAA+G AGV N+L + +E + M L G +++++R+ + Sbjct: 333 IYALAAQGRAGVENLLDLYEKEMRVAMTLTGAKSIAELSRDSL 375
>LLDD_XANOR (Q5H6Z4) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 388 Score = 37.7 bits (86), Expect = 0.019 Identities = 16/41 (39%), Positives = 28/41 (68%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITRE 396 V+ALAA+G+AGV N+L ++ +E + M L G ++ I+ + Sbjct: 333 VYALAADGQAGVENLLTLIEKEMRVAMTLTGTHSIAQISAD 373
>MDLB_PSEPU (P20932) L(+)-mandelate dehydrogenase (EC 1.-.-.-) (S-mandelate| dehydrogenase) (MDH) Length = 393 Score = 37.4 bits (85), Expect = 0.025 Identities = 15/47 (31%), Positives = 30/47 (63%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEG 378 ++ LAA GE GV VL +++ + + T+A GC ++ ++ +++ EG Sbjct: 330 LYGLAARGETGVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNEG 376
>LLDD_XANC5 (Q3BZH2) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 388 Score = 37.4 bits (85), Expect = 0.025 Identities = 16/41 (39%), Positives = 28/41 (68%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITRE 396 V+ALAA G+AGV N+L ++ +E + M L G +++I+ + Sbjct: 333 VYALAAAGQAGVENLLTLIEKEMRVAMTLTGTHSIAEISAD 373
>LLDD_BARHE (Q6G4R2) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 383 Score = 37.0 bits (84), Expect = 0.033 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHI 390 V+ALAA GE GV +++ + E + M L G + +ITRE + Sbjct: 333 VYALAAAGEKGVAHLIDLFANEMRVAMTLTGVRAIKEITRESL 375
>LLDD_XANCP (Q8PE75) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 386 Score = 36.2 bits (82), Expect = 0.056 Identities = 20/52 (38%), Positives = 30/52 (57%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGR 363 V+ALAA G+AGV N+L ++ E + M L G +++I+ GD L R Sbjct: 333 VYALAAGGQAGVENLLTLIEREMRVAMILTGTHSVAEIS-------GDALSR 377
>LLDD_XANC8 (Q4V0H2) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 386 Score = 36.2 bits (82), Expect = 0.056 Identities = 20/52 (38%), Positives = 30/52 (57%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLGR 363 V+ALAA G+AGV N+L ++ E + M L G +++I+ GD L R Sbjct: 333 VYALAAGGQAGVENLLTLIEREMRVAMILTGTHSVAEIS-------GDALSR 377
>YWZ5_CAEEL (Q11095) Hypothetical protein C02B8.5| Length = 453 Score = 34.3 bits (77), Expect = 0.21 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 Query: 78 NTIWCSRCEIWWKWRDVPVDKY 143 N+ WC C + W+WR +P D Y Sbjct: 412 NSEWCGLCNLCWQWRKLPADYY 433
>HAOX2_RAT (Q07523) Hydroxyacid oxidase 2 (EC 1.1.3.15) (HAOX2)| ((S)-2-hydroxy-acid oxidase, peroxisomal) (Long chain alpha-hydroxy acid oxidase) (Long-chain L-2-hydroxy acid oxidase) Length = 352 Score = 34.3 bits (77), Expect = 0.21 Identities = 15/44 (34%), Positives = 27/44 (61%) Frame = -2 Query: 521 VVFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHI 390 +++ LA +GE GV+ VL ++ E M L GC +++I+ + I Sbjct: 304 ILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLI 347
>LLDD_ACIAD (Q6FFS1) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 384 Score = 34.3 bits (77), Expect = 0.21 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = -2 Query: 518 VFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDI 405 ++ALAA+G GV N+L ++ +E + M L G ++DI Sbjct: 333 IYALAAQGGQGVSNLLDLIDKEMRVAMTLTGAKTIADI 370
>LLDD_CAUCR (Q9A943) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 383 Score = 33.5 bits (75), Expect = 0.36 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -2 Query: 515 FALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEGDRLG 366 +ALAA GEAGV +L ++ +E + MAL G ++ I + R G Sbjct: 334 YALAARGEAGVTQLLDLIDKEMRVAMALTGVRDVASINETILAERVPRAG 383
>IDI2_METBF (Q46CL4) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) Length = 365 Score = 32.0 bits (71), Expect = 1.1 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = -2 Query: 506 AAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEG 378 A EG+ V VL M +EF + M L GC + D+ + G Sbjct: 300 ALEGKESVVRVLSRMLDEFRIAMFLCGCANIQDLRNAPVVVTG 342
>DSX_DROME (P23023) Protein doublesex| Length = 549 Score = 31.2 bits (69), Expect = 1.8 Identities = 24/87 (27%), Positives = 31/87 (35%), Gaps = 3/87 (3%) Frame = -1 Query: 453 VRAHHGARRVHQAQRHHPRTHLHRGRPPRTPAAEDVIKSQRHXXX---XXXXXXTAGHMH 283 V A A R QAQ H+H PP PAA ++ H A H H Sbjct: 82 VMALQTALRRAQAQDEQRALHMHEV-PPANPAATTLLSHHHHVAAPAHVHAHHVHAHHAH 140 Query: 282 ASQYPPQRNATHAIITANSISTTPSAP 202 + + H A + + PSAP Sbjct: 141 GGHHSHHGHVLHHQQAAAAAAAAPSAP 167
>SPOT_SHIFL (P0AG26) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 702 Score = 30.8 bits (68), Expect = 2.4 Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 7/56 (12%) Frame = -2 Query: 515 FALAAEGEAGVRNVLRMMREEFELTM-------ALGGCTKLSDITREHIFTEGDRL 369 F ++++ A +R +L+ ++ + +++ ALGG KL++I +E+I E DR+ Sbjct: 460 FVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENIQRELDRM 515
>SPOT_ECOLI (P0AG24) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 702 Score = 30.8 bits (68), Expect = 2.4 Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 7/56 (12%) Frame = -2 Query: 515 FALAAEGEAGVRNVLRMMREEFELTM-------ALGGCTKLSDITREHIFTEGDRL 369 F ++++ A +R +L+ ++ + +++ ALGG KL++I +E+I E DR+ Sbjct: 460 FVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENIQRELDRM 515
>SPOT_ECO57 (P0AG25) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 702 Score = 30.8 bits (68), Expect = 2.4 Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 7/56 (12%) Frame = -2 Query: 515 FALAAEGEAGVRNVLRMMREEFELTM-------ALGGCTKLSDITREHIFTEGDRL 369 F ++++ A +R +L+ ++ + +++ ALGG KL++I +E+I E DR+ Sbjct: 460 FVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENIQRELDRM 515
>SC5A2_MOUSE (Q923I7) Sodium/glucose cotransporter 2 (Na(+)/glucose| cotransporter 2) (Low affinity sodium-glucose cotransporter) Length = 670 Score = 30.4 bits (67), Expect = 3.1 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = +2 Query: 149 NLSTTAHRPRPDTHG*HLGADGVV-DIEFAVIIACVALRCGGYW 277 N+S+T ++PRPD++ HL D V D+ + ++ + + G YW Sbjct: 248 NISSTCYQPRPDSY--HLLRDPVTGDLPWPALLLGLTIVSGWYW 289
>SC5A2_RABIT (P26430) Sodium/nucleoside cotransporter (Na(+)/nucleoside| cotransporter) Length = 672 Score = 30.4 bits (67), Expect = 3.1 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = +2 Query: 149 NLSTTAHRPRPDTHG*HLGADGVV-DIEFAVIIACVALRCGGYW 277 N+S++ +RPRPD++ HL D V D+ + ++ + + G YW Sbjct: 250 NISSSCYRPRPDSY--HLLRDPVTGDLPWPALLLGLTIVSGWYW 291
>IDI2_METMA (Q8PW37) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) Length = 365 Score = 30.4 bits (67), Expect = 3.1 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -2 Query: 500 EGEAGVRNVLRMMREEFELTMALGGCTKLSDITREHIFTEG 378 EG+ V VL M EEF+ M L GC + D+ + G Sbjct: 302 EGKESVVRVLSCMLEEFKAAMFLCGCGNIKDLHNSPVVVTG 342
>PO3F2_RAT (P56222) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 30.0 bits (66), Expect = 4.0 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 5/33 (15%) Frame = -1 Query: 444 HHGARRVHQAQRH-----HPRTHLHRGRPPRTP 361 HHG R H H HP +H H+ PP P Sbjct: 214 HHGLRDAHDEPHHADHHPHPHSHPHQQPPPPPP 246
>PO3F2_MOUSE (P31360) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 30.0 bits (66), Expect = 4.0 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 5/33 (15%) Frame = -1 Query: 444 HHGARRVHQAQRH-----HPRTHLHRGRPPRTP 361 HHG R H H HP +H H+ PP P Sbjct: 214 HHGLRDAHDEPHHADHHPHPHSHPHQQPPPPPP 246
>PO3F2_HUMAN (P20265) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 443 Score = 30.0 bits (66), Expect = 4.0 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 5/33 (15%) Frame = -1 Query: 444 HHGARRVHQAQRH-----HPRTHLHRGRPPRTP 361 HHG R H H HP +H H+ PP P Sbjct: 212 HHGLRDAHDEPHHADHHPHPHSHPHQQPPPPPP 244
>FOXGA_HUMAN (P55316) Forkhead box protein G1A (Forkhead-related protein FKHL2)| (Transcription factor BF-2) (Brain factor 2) (BF2) (HFK2) Length = 469 Score = 29.6 bits (65), Expect = 5.3 Identities = 12/29 (41%), Positives = 12/29 (41%) Frame = -1 Query: 447 AHHGARRVHQAQRHHPRTHLHRGRPPRTP 361 A HG H Q HH H H PP P Sbjct: 35 ASHGHHNSHHPQHHHHHHHHHHHPPPPAP 63
>PFA5_YEAST (Q03289) Palmitoyltransferase PFA5 (EC 2.3.1.-) (Protein fatty| acyltransferase 5) Length = 374 Score = 29.6 bits (65), Expect = 5.3 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +3 Query: 24 YDKYRIDECIRADPIGHGNTIWCSRCE 104 YD +C ++DP HG IWCS C+ Sbjct: 111 YDAVVPPKCYQSDP--HGYPIWCSECQ 135
>FOXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (HFK1) Length = 477 Score = 29.6 bits (65), Expect = 5.3 Identities = 12/29 (41%), Positives = 12/29 (41%) Frame = -1 Query: 447 AHHGARRVHQAQRHHPRTHLHRGRPPRTP 361 A HG H Q HH H H PP P Sbjct: 35 ASHGHHNSHHPQHHHHHHHHHHHPPPPAP 63
>MTCY_LEUME (P38577) Bacteriocin mesentericin Y105 precursor| Length = 61 Score = 29.6 bits (65), Expect = 5.3 Identities = 22/59 (37%), Positives = 30/59 (50%) Frame = +1 Query: 25 MINTESMSVYVRTQ*DMEIQYGVVGAKYGGNGETCRSTSTQKFIYYGSPSPAGHTRLAS 201 M N +S+ Y Q D + VVG KY GNG C T + + +G + AG RLA+ Sbjct: 1 MTNMKSVEAY--QQLDNQNLKKVVGGKYYGNGVHC--TKSGCSVNWGEAASAGIHRLAN 55
>DHOM_PSEAE (P29365) Homoserine dehydrogenase (EC 1.1.1.3) (HDH)| Length = 434 Score = 29.3 bits (64), Expect = 6.9 Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = +2 Query: 101 RNMVEMARRAGRQVRKNLSTTAHRPRP--DTHG*HLGADGVVDIEFAVIIACVALRCGGY 274 RN E+ARRAGR + + A RP P DT + AD + D+ I V GGY Sbjct: 24 RNAEEIARRAGRGI-EVAQIAARRPNPKCDTGATPITAD-IFDVACNPEIDVVVELIGGY 81 Query: 275 WLA 283 LA Sbjct: 82 TLA 84
>Y2059_STRMU (Q8DRZ4) Hypothetical UPF0324 membrane protein SMU.2059c| Length = 341 Score = 28.9 bits (63), Expect = 9.0 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +2 Query: 218 VDIEFAVIIACVALRCGGYWLACICPAVRRDGDE 319 +D+ A ++ + CGG +A P ++ DGDE Sbjct: 113 LDVNTATLVGVGSSICGGSAIAATAPVIQADGDE 146
>CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25| Length = 447 Score = 28.9 bits (63), Expect = 9.0 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 450 RAHHGARRVHQAQRHHPRTHLHRGRPPRTPAAED 349 R+ H H++ RH R+H HR R P +P D Sbjct: 195 RSRHEDEDAHRSHRH--RSHRHRSRSPLSPDRSD 226 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,576,278 Number of Sequences: 219361 Number of extensions: 1312508 Number of successful extensions: 4250 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 3954 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4217 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
