ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaak4k10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 188 1e-44
2gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 188 1e-44
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
4dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
5dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
6dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
7gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA... 149 1e-32
8gb|AY108197.1| Zea mays PCO065133 mRNA sequence 123 6e-25
9ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA 111 2e-21
10ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group... 111 2e-21
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
12dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
13dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
14dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
15dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
16dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
17ref|XM_473942.1| Oryza sativa (japonica cultivar-group), predic... 68 3e-08
18emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 68 3e-08
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
20dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
21dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
22dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
23gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) m... 46 0.11
24dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.45
25gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB... 42 1.8
26emb|CR619043.1| full-length cDNA clone CS0DF028YK10 of Fetal bra... 42 1.8
27gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, co... 42 1.8
28gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 42 1.8
29gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 40 7.1
30gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 7.1
31gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 40 7.1
32gb|AC093543.8| Trypanosoma brucei chromosome 3 clone RPCI93-5L5,... 40 7.1
33gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
34gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH... 40 7.1
35gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
36emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 7.1
37ref|XM_821817.1| Trypanosoma brucei TREU927 clone RPCI93-5L5 Hsc... 40 7.1
38gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 7.1
39emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clon... 40 7.1
40emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in ... 40 7.1
41dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 7.1
42gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell... 40 7.1
43gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.1
44dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
45dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
46gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, r... 40 7.1
47gb|AC024267.18| Homo sapiens chromosome 17, clone RP11-20B24, co... 40 7.1
48dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.1
49gb|AY789624.1| Coix lacryma-jobi voucher PI320865 USDA FL gene, ... 40 7.1
50dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
51gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62... 40 7.1
52gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 40 7.1
53gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 7.1
54gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.1
55gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
56gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
57emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.1 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  188 bits (95), Expect = 1e-44
 Identities = 140/155 (90%)
 Strand = Plus / Minus

                                                                            
Query: 368      cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 427
                ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 32328144 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 32328085

                                                                            
Query: 428      cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 487
                ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 32328084 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 32328025

                                                   
Query: 488      cggcctcgccctccgccgccagcgcgaacaccacc 522
                ||||||| |||||||||||||||||||||||||||
Sbjct: 32328024 cggcctccccctccgccgccagcgcgaacaccacc 32327990
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>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score =  188 bits (95), Expect = 1e-44
 Identities = 140/155 (90%)
 Strand = Plus / Minus

                                                                         
Query: 368   cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 427
             ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 61911 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 61852

                                                                         
Query: 428   cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 487
             ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 61851 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 61792

                                                
Query: 488   cggcctcgccctccgccgccagcgcgaacaccacc 522
             ||||||| |||||||||||||||||||||||||||
Sbjct: 61791 cggcctccccctccgccgccagcgcgaacaccacc 61757
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  188 bits (95), Expect = 1e-44
 Identities = 140/155 (90%)
 Strand = Plus / Minus

                                                                            
Query: 368      cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 427
                ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 32418654 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 32418595

                                                                            
Query: 428      cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 487
                ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 32418594 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 32418535

                                                   
Query: 488      cggcctcgccctccgccgccagcgcgaacaccacc 522
                ||||||| |||||||||||||||||||||||||||
Sbjct: 32418534 cggcctccccctccgccgccagcgcgaacaccacc 32418500
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>dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N09, full
            insert sequence
          Length = 1526

 Score =  188 bits (95), Expect = 1e-44
 Identities = 140/155 (90%)
 Strand = Plus / Minus

                                                                        
Query: 368  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 427
            ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1162 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1103

                                                                        
Query: 428  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 487
            ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 1102 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1043

                                               
Query: 488  cggcctcgccctccgccgccagcgcgaacaccacc 522
            ||||||| |||||||||||||||||||||||||||
Sbjct: 1042 cggcctccccctccgccgccagcgcgaacaccacc 1008
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>dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E15, full
            insert sequence
          Length = 1522

 Score =  188 bits (95), Expect = 1e-44
 Identities = 140/155 (90%)
 Strand = Plus / Minus

                                                                        
Query: 368  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 427
            ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1158 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1099

                                                                        
Query: 428  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 487
            ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 1098 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1039

                                               
Query: 488  cggcctcgccctccgccgccagcgcgaacaccacc 522
            ||||||| |||||||||||||||||||||||||||
Sbjct: 1038 cggcctccccctccgccgccagcgcgaacaccacc 1004
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>dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H12, full
            insert sequence
          Length = 1586

 Score =  188 bits (95), Expect = 1e-44
 Identities = 140/155 (90%)
 Strand = Plus / Minus

                                                                        
Query: 368  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 427
            ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1222 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1163

                                                                        
Query: 428  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 487
            ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 1162 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1103

                                               
Query: 488  cggcctcgccctccgccgccagcgcgaacaccacc 522
            ||||||| |||||||||||||||||||||||||||
Sbjct: 1102 cggcctccccctccgccgccagcgcgaacaccacc 1068
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>gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA, complete cds
          Length = 1473

 Score =  149 bits (75), Expect = 1e-32
 Identities = 135/155 (87%)
 Strand = Plus / Minus

                                                                        
Query: 368  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 427
            ||||||| ||| | || ||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1128 cgaggcgttcggcgtccgtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1069

                                                                        
Query: 428  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 487
            ||| || ||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |
Sbjct: 1068 cgctgaacgccatggtgagctcgaactcctcccgcatcatccgcagcaggttcctcaccc 1009

                                               
Query: 488  cggcctcgccctccgccgccagcgcgaacaccacc 522
            ||||||  |||||||||||||||||||||||||||
Sbjct: 1008 cggccttcccctccgccgccagcgcgaacaccacc 974
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>gb|AY108197.1| Zea mays PCO065133 mRNA sequence
          Length = 1667

 Score =  123 bits (62), Expect = 6e-25
 Identities = 122/142 (85%)
 Strand = Plus / Minus

                                                                        
Query: 381  ctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgagcgccat 440
            |||||||| |||||| | ||||||||| |||  |||   |||||| |||| |||||||||
Sbjct: 1288 ctcggtgatgatgtgcttgcgggtgatttcggcgagggaggtgcagccgctgagcgccat 1229

                                                                        
Query: 441  ggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggcctcgccctc 500
            ||||||||||||||| ||||||| ||||||||| |||||   |||||||||||||||| |
Sbjct: 1228 ggtgagctcgaactcgtcccgcagcatgcgcaggacgttggacacgccggcctcgcccgc 1169

                                  
Query: 501  cgccgccagcgcgaacaccacc 522
            ||||||||| | ||||||||||
Sbjct: 1168 cgccgccagggagaacaccacc 1147
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>ref|XM_476669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1439

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                        
Query: 375  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 434
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1146 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1087

                                                                        
Query: 435  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggcctc 494
            ||||||||||||||||||||| || || | |||  ||||||||||||| || ||||||||
Sbjct: 1086 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1027

                                        
Query: 495  gccctccgccgccagcgcgaacaccacc 522
             ||| |||||||||||| ||||||||||
Sbjct: 1026 ccccgccgccgccagcgagaacaccacc 999
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>ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group), B1364A02.11-1 mRNA
          Length = 1501

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                        
Query: 375  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 434
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1187 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1128

                                                                        
Query: 435  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggcctc 494
            ||||||||||||||||||||| || || | |||  ||||||||||||| || ||||||||
Sbjct: 1127 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1068

                                        
Query: 495  gccctccgccgccagcgcgaacaccacc 522
             ||| |||||||||||| ||||||||||
Sbjct: 1067 ccccgccgccgccagcgagaacaccacc 1040
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                           
Query: 375     gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 434
               |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 2833181 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 2833122

                                                                           
Query: 435     cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggcctc 494
               ||||||||||||||||||||| || || | |||  ||||||||||||| || ||||||||
Sbjct: 2833121 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 2833062

                                           
Query: 495     gccctccgccgccagcgcgaacaccacc 522
                ||| |||||||||||| ||||||||||
Sbjct: 2833061 ccccgccgccgccagcgagaacaccacc 2833034
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>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1364A02
          Length = 137933

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                          
Query: 375    gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 434
              |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 136742 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 136683

                                                                          
Query: 435    cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggcctc 494
              ||||||||||||||||||||| || || | |||  ||||||||||||| || ||||||||
Sbjct: 136682 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 136623

                                          
Query: 495    gccctccgccgccagcgcgaacaccacc 522
               ||| |||||||||||| ||||||||||
Sbjct: 136622 ccccgccgccgccagcgagaacaccacc 136595
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>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0050B07
          Length = 142134

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                        
Query: 375  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 434
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 3468 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 3409

                                                                        
Query: 435  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggcctc 494
            ||||||||||||||||||||| || || | |||  ||||||||||||| || ||||||||
Sbjct: 3408 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 3349

                                        
Query: 495  gccctccgccgccagcgcgaacaccacc 522
             ||| |||||||||||| ||||||||||
Sbjct: 3348 ccccgccgccgccagcgagaacaccacc 3321
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>dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A14, full
            insert sequence
          Length = 1738

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                        
Query: 375  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 434
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1445 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1386

                                                                        
Query: 435  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggcctc 494
            ||||||||||||||||||||| || || | |||  ||||||||||||| || ||||||||
Sbjct: 1385 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1326

                                        
Query: 495  gccctccgccgccagcgcgaacaccacc 522
             ||| |||||||||||| ||||||||||
Sbjct: 1325 ccccgccgccgccagcgagaacaccacc 1298
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>dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E11, full
            insert sequence
          Length = 1439

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                        
Query: 375  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 434
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1146 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1087

                                                                        
Query: 435  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggcctc 494
            ||||||||||||||||||||| || || | |||  ||||||||||||| || ||||||||
Sbjct: 1086 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1027

                                        
Query: 495  gccctccgccgccagcgcgaacaccacc 522
             ||| |||||||||||| ||||||||||
Sbjct: 1026 ccccgccgccgccagcgagaacaccacc 999
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>dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E08, full
            insert sequence
          Length = 1501

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                        
Query: 375  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 434
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1187 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1128

                                                                        
Query: 435  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggcctc 494
            ||||||||||||||||||||| || || | |||  ||||||||||||| || ||||||||
Sbjct: 1127 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1068

                                        
Query: 495  gccctccgccgccagcgcgaacaccacc 522
             ||| |||||||||||| ||||||||||
Sbjct: 1067 ccccgccgccgccagcgagaacaccacc 1040
to top
>ref|XM_473942.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                        
Query: 421  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 480
            ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 1034 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 975

                                                      
Query: 481  cgcacgccggcctcgccctccgccgccagcgcgaacaccacc 522
            | ||||||||||||||| ||| | ||||||| ||||| ||||
Sbjct: 974  ctcacgccggcctcgccgtccacggccagcgagaacagcacc 933
to top
>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
             complete sequence
          Length = 187601

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                         
Query: 421   gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 480
             ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 59360 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 59301

                                                       
Query: 481   cgcacgccggcctcgccctccgccgccagcgcgaacaccacc 522
             | ||||||||||||||| ||| | ||||||| ||||| ||||
Sbjct: 59300 ctcacgccggcctcgccgtccacggccagcgagaacagcacc 59259



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                         
Query: 421   gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 480
             ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| |||||
Sbjct: 63428 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 63369

                              
Query: 481   cgcacgccggcctcgcc 497
             | |||||||||||||||
Sbjct: 63368 ctcacgccggcctcgcc 63352
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                            
Query: 421      gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 480
                ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 31726090 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 31726031

                                                          
Query: 481      cgcacgccggcctcgccctccgccgccagcgcgaacaccacc 522
                | ||||||||||||||| ||| | ||||||| ||||| ||||
Sbjct: 31726030 ctcacgccggcctcgccgtccacggccagcgagaacagcacc 31725989



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                            
Query: 421      gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 480
                ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| |||||
Sbjct: 31730158 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 31730099

                                 
Query: 481      cgcacgccggcctcgcc 497
                | |||||||||||||||
Sbjct: 31730098 ctcacgccggcctcgcc 31730082
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>dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156O03, full
            insert sequence
          Length = 1435

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                        
Query: 421  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 480
            ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 1103 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 1044

                                                      
Query: 481  cgcacgccggcctcgccctccgccgccagcgcgaacaccacc 522
            | ||||||||||||||| ||| | ||||||| ||||| ||||
Sbjct: 1043 ctcacgccggcctcgccgtccacggccagcgagaacagcacc 1002
to top
>dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F07, full
            insert sequence
          Length = 1427

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                        
Query: 421  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 480
            ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 1107 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 1048

                                                      
Query: 481  cgcacgccggcctcgccctccgccgccagcgcgaacaccacc 522
            | ||||||||||||||| ||| | ||||||| ||||| ||||
Sbjct: 1047 ctcacgccggcctcgccgtccacggccagcgagaacagcacc 1006
to top
>dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131A08, full
            insert sequence
          Length = 1986

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                        
Query: 421  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 480
            ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| |||||
Sbjct: 1621 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 1562

                             
Query: 481  cgcacgccggcctcgcc 497
            | |||||||||||||||
Sbjct: 1561 ctcacgccggcctcgcc 1545
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>gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) mRNA, complete cds
          Length = 1486

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 436  gccatggtgagctcgaactcctc 458
            |||||||||||||||||||||||
Sbjct: 1115 gccatggtgagctcgaactcctc 1093
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 358    agcgggcgtccgaggcggtcgc 379
              ||||||||||||||||||||||
Sbjct: 277779 agcgggcgtccgaggcggtcgc 277800



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 352     ctcggcagcgggcgtccgag 371
               ||||||||||||||||||||
Sbjct: 5814716 ctcggcagcgggcgtccgag 5814697
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>gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB), ORFC (orfC), ORFD
             (orfD), ORFE (orfE), ORFF (orfF), ORFG (orfG), ORFH
             (orfH), LinX1 (linX1), LinX2 (linX2), and LinA (linA)
             genes, complete cds; insertion sequence IS6100A, complete
             sequence; ORFJ' (orfJ') and ORFK (orfK) genes, complete
             cds; insertion sequence IS6100B, complete sequence; LinC
             (linC) gene, complete cds; insertion sequence IS6100C,
             complete sequence; and 'ORFN ('orfN), ORFO (orfO), ORFP
             (orfP), ORFQ (orfQ), ORFR (orfR), ORFS (orfS), ORFT
             (orfT), ORFU (orfU), ORFV (orfV), ORFW (orfW), ORFX
             (orfX), and ORFY (orfY) genes, complete cds
          Length = 41034

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 490   gcctcgccctccgccgccagc 510
             |||||||||||||||||||||
Sbjct: 34679 gcctcgccctccgccgccagc 34659
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>emb|CR619043.1| full-length cDNA clone CS0DF028YK10 of Fetal brain of Homo sapiens
           (human)
          Length = 1491

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 490 gcctcgccctccgccgccagc 510
           |||||||||||||||||||||
Sbjct: 590 gcctcgccctccgccgccagc 610
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>gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, complete sequence
          Length = 205794

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 490    gcctcgccctccgccgccagc 510
              |||||||||||||||||||||
Sbjct: 136003 gcctcgccctccgccgccagc 135983
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 449     cgaactcctcccgcatcatgcgcag 473
               |||| ||||||||||||||||||||
Sbjct: 2682575 cgaaatcctcccgcatcatgcgcag 2682551
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>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 455    cctcccgcatcatgcgcagcacgttccg 482
              ||||||||||||||||| |||| |||||
Sbjct: 284029 cctcccgcatcatgcgctgcactttccg 284056
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 489     ggcctcgccctccgccgcca 508
               ||||||||||||||||||||
Sbjct: 2892758 ggcctcgccctccgccgcca 2892777
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>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 495     gccctccgccgccagcgcga 514
               ||||||||||||||||||||
Sbjct: 1499835 gccctccgccgccagcgcga 1499854
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>gb|AC093543.8| Trypanosoma brucei chromosome 3 clone RPCI93-5L5, complete sequence
          Length = 148711

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 495   gccctccgccgccagcgcga 514
             ||||||||||||||||||||
Sbjct: 74047 gccctccgccgccagcgcga 74066
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>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0002A19, complete sequence
          Length = 139052

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 97    ggtgcgaaatatggtggaaatggcgaga 124
             |||||||||| |||||||||||| ||||
Sbjct: 29983 ggtgcgaaatttggtggaaatggagaga 29956
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>gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH) gene, complete cds
          Length = 3005

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 390  gatgtgttcgcgggtgatgtcgctgagc 417
            |||||| ||||||||| |||||||||||
Sbjct: 1051 gatgtgctcgcgggtggtgtcgctgagc 1024
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>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06,
              complete sequence
          Length = 158842

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 97     ggtgcgaaatatggtggaaatggcgaga 124
              |||||||||| |||||||||||| ||||
Sbjct: 158442 ggtgcgaaatttggtggaaatggagaga 158415
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 390    gatgtgttcgcgggtgatgtcgctgagc 417
              |||||| ||||||||| |||||||||||
Sbjct: 766325 gatgtgctcgcgggtggtgtcgctgagc 766298
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>ref|XM_821817.1| Trypanosoma brucei TREU927 clone RPCI93-5L5 Hsc70-interacting
           protein (Tb927.3.5340) partial mRNA
          Length = 1155

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 495 gccctccgccgccagcgcga 514
           ||||||||||||||||||||
Sbjct: 700 gccctccgccgccagcgcga 719
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   ccgccgccagcgcgaacacc 519
             ||||||||||||||||||||
Sbjct: 67982 ccgccgccagcgcgaacacc 68001
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>emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clone B13M15
          Length = 63598

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   gtgcgttgcgttgcgttgcg 266
             ||||||||||||||||||||
Sbjct: 42541 gtgcgttgcgttgcgttgcg 42560
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>emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in linkage group 5, complete
              sequence
          Length = 186135

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     acatggaaatacaatatggt 90
              ||||||||||||||||||||
Sbjct: 166707 acatggaaatacaatatggt 166688
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 390     gatgtgttcgcgggtgatgtcgctgagc 417
               |||||| ||||||||| |||||||||||
Sbjct: 4277328 gatgtgctcgcgggtggtgtcgctgagc 4277355
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>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   gtgcgttgcgttgcgttgcg 266
             ||||||||||||||||||||
Sbjct: 26559 gtgcgttgcgttgcgttgcg 26540
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>gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306,  section 68 of 469 of the
            complete genome
          Length = 11141

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 390  gatgtgttcgcgggtgatgtcgctgagc 417
            |||||| ||||||||| |||||||||||
Sbjct: 3644 gatgtgctcgcgggtggtgtcgctgagc 3617
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 21       atgtatgataaatacagaat 40
                ||||||||||||||||||||
Sbjct: 22849581 atgtatgataaatacagaat 22849562
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 97       ggtgcgaaatatggtggaaatggcgaga 124
                |||||||||| |||||||||||| ||||
Sbjct: 17868791 ggtgcgaaatttggtggaaatggagaga 17868764
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>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone
             BACR48M01, complete sequence
          Length = 188272

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   gtgcgttgcgttgcgttgcg 266
             ||||||||||||||||||||
Sbjct: 77465 gtgcgttgcgttgcgttgcg 77484
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>gb|AC024267.18| Homo sapiens chromosome 17, clone RP11-20B24, complete sequence
          Length = 175020

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 485   cgccggcctcgccctccgccgcca 508
             |||||||| |||||||||||||||
Sbjct: 90904 cgccggccccgccctccgccgcca 90881
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 489     ggcctcgccctccgccgcca 508
               ||||||||||||||||||||
Sbjct: 1654023 ggcctcgccctccgccgcca 1654004
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>gb|AY789624.1| Coix lacryma-jobi voucher PI320865 USDA FL gene, partial cds
          Length = 1036

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 486 gccggcctcgccctccgccgccag 509
           |||| |||||||||||||||||||
Sbjct: 744 gccgccctcgccctccgccgccag 721
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>dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-E12, full
           insert sequence
          Length = 2833

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 gtgcgttgcgttgcgttgcg 266
           ||||||||||||||||||||
Sbjct: 859 gtgcgttgcgttgcgttgcg 878
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>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the
            complete sequence
          Length = 290640

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  gtgcgttgcgttgcgttgcg 266
            ||||||||||||||||||||
Sbjct: 5027 gtgcgttgcgttgcgttgcg 5008
to top
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    gtgcgttgcgttgcgttgcg 266
              ||||||||||||||||||||
Sbjct: 111005 gtgcgttgcgttgcgttgcg 111024
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 390     gatgtgttcgcgggtgatgtcgctgagc 417
               |||||| ||||||||| |||||||||||
Sbjct: 4284118 gatgtgctcgcgggtggtgtcgctgagc 4284145
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 503     ccgccagcgcgaacaccacc 522
               ||||||||||||||||||||
Sbjct: 3258324 ccgccagcgcgaacaccacc 3258305
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 97       ggtgcgaaatatggtggaaatggcgaga 124
                |||||||||| |||||||||||| ||||
Sbjct: 17963108 ggtgcgaaatttggtggaaatggagaga 17963081
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 21       atgtatgataaatacagaat 40
                ||||||||||||||||||||
Sbjct: 22777772 atgtatgataaatacagaat 22777753
to top
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     atgtatgataaatacagaat 40
              ||||||||||||||||||||
Sbjct: 107263 atgtatgataaatacagaat 107282


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,030,218
Number of Sequences: 3902068
Number of extensions: 3030218
Number of successful extensions: 56638
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55468
Number of HSP's gapped (non-prelim): 1151
length of query: 522
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 499
effective length of database: 17,143,297,704
effective search space: 8554505554296
effective search space used: 8554505554296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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