ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaak4k09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1Y531_METJA (Q57951) Hypothetical protein MJ0531 51 3e-06
2YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I 48 2e-05
3Y1388_SYNY3 (P74148) Hypothetical protein sll1388 45 1e-04
4YXIE_BACSU (P42297) Hypothetical protein yxiE precursor 45 2e-04
5Y1101_SYNY3 (P72745) Hypothetical protein slr1101 43 5e-04
6Y2028_MYCBO (P64922) Hypothetical protein Mb2028c 39 0.013
7Y2005_MYCTU (P64921) Hypothetical protein Rv2005c/MT2061 39 0.013
8NHAX_BACSU (O07552) Stress response protein nhaX 38 0.022
9CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long... 37 0.029
10CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor 37 0.049
11Y577_METJA (Q57997) Protein MJ0577 37 0.049
12Y1654_SYNY3 (P72817) Hypothetical protein sll1654 36 0.064
13Y2019_MYCBO (P0A5F8) Hypothetical protein Mb2019 35 0.14
14Y1996_MYCTU (P0A5F7) Hypothetical protein Rv1996/MT2052 35 0.14
15USPE_PHOLL (P60005) Universal stress protein E 35 0.19
16YQA3_THEAQ (P74897) Hypothetical 14.6 kDa protein in QAH/OAS sul... 34 0.24
17CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor 34 0.24
18CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor 34 0.32
19COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor 34 0.32
20CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor 33 0.42
21Y1154_METTH (O27222) Hypothetical protein MTH1154 33 0.42
22COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibr... 33 0.54
23CO9A1_RAT (P20850) Collagen alpha-1(IX) chain (Fragment) 33 0.54
24CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment) 33 0.54
25K0853_HUMAN (Q5T200) Protein KIAA0853 32 0.93
26SFTPA_MACMU (Q9TUC5) Pulmonary surfactant-associated protein A (... 32 0.93
27CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragm... 32 1.2
28COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemph... 32 1.2
29CLPB_CHRVO (Q7NWN7) Chaperone clpB 32 1.2
30USPF_SALTY (P67091) Universal stress protein F 32 1.2
31USPF_SALTI (P67092) Universal stress protein F 32 1.2
32USPE_SALTY (Q8ZP84) Universal stress protein E 32 1.2
33USPE_SALTI (Q8Z788) Universal stress protein E 32 1.2
34USPF_SHIFL (P0A4P8) Universal stress protein F 32 1.6
35USPF_ECOLI (P37903) Universal stress protein F 32 1.6
36USPF_ECOL6 (P0A4P6) Universal stress protein F 32 1.6
37USPF_ECO57 (P0A4P7) Universal stress protein F 32 1.6
38MUCR_RHISN (P55363) Transcriptional regulatory protein mucR homolog 32 1.6
39CMGA_MOUSE (P26339) Chromogranin A precursor (CgA) [Contains: Pa... 31 2.1
40CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor 31 2.1
41CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor 31 2.1
42USPE_SHIFL (P0AAC3) Universal stress protein E 31 2.1
43USPE_ECOLI (P0AAC0) Universal stress protein E 31 2.1
44USPE_ECOL6 (P0AAC1) Universal stress protein E 31 2.1
45USPE_ECO57 (P0AAC2) Universal stress protein E 31 2.1
46CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor 31 2.1
47YB54_METTM (Q50777) Hypothetical 16.1 kDa protein in MTR region ... 31 2.1
48CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor 31 2.1
49CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor 31 2.1
50CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contain... 31 2.7
51CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Conta... 31 2.7
52SFTPA_MOUSE (P35242) Pulmonary surfactant-associated protein A p... 31 2.7
53CO6A1_MOUSE (Q04857) Collagen alpha-1(VI) chain precursor 31 2.7
54CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragme... 30 3.5
55COL8_CAEEL (P18833) Cuticle collagen 8 precursor 30 3.5
56COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragm... 30 3.5
57CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor 30 3.5
58AGC1_ASHGO (Q75AH6) Mitochondrial aspartate-glutamate transporte... 30 3.5
59COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor 30 3.5
60CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Conta... 30 3.5
61COL13_CAEEL (P20631) Cuticle collagen 13 precursor 30 3.5
62COL12_CAEEL (P20630) Cuticle collagen 12 precursor 30 3.5
63COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor 30 3.5
64CMGA_RAT (P10354) Chromogranin A precursor (CgA) [Contains: Panc... 30 3.5
65COLE_LEPMA (P98085) Inner ear-specific collagen precursor (Saccu... 30 3.5
66MUCR_RHIME (P55323) Transcriptional regulatory protein mucR 30 3.5
67CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor 30 4.6
68CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor 30 4.6
69TRC8_DROME (Q7KRW1) Protein TRC8 homolog 30 4.6
70ROL6_CAEEL (P20784) Cuticle collagen rol-6 (Protein roller-6) 30 4.6
71CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Frag... 30 4.6
72CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor 30 4.6
73SFTPA_SHEEP (Q9TT06) Pulmonary surfactant-associated protein A p... 30 4.6
74SFTA2_HUMAN (Q8IWL1) Pulmonary surfactant-associated protein A2 ... 30 4.6
75CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor 30 4.6
76CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment) 30 4.6
77CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments) 30 4.6
78SFTPA_BOVIN (Q6RXL1) Pulmonary surfactant-associated protein A (... 30 4.6
79COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor 30 6.0
80CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor 30 6.0
81COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor 30 6.0
82COCA1_RAT (P70560) Collagen alpha-1(XII) chain (Fragment) 30 6.0
83CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor 30 6.0
84COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor 30 6.0
85SFTPA_PIG (P49874) Pulmonary surfactant-associated protein A pre... 30 6.0
86AGC1_YEAST (Q12482) Mitochondrial aspartate-glutamate transporte... 29 7.9
87CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor 29 7.9
88USPG_SALTY (P67093) Universal stress protein G 29 7.9
89USPG_SALTI (P67094) Universal stress protein G 29 7.9
90USPG_ECOL6 (Q8FK07) Universal stress protein G 29 7.9
91SFTA1_HUMAN (Q8IWL2) Pulmonary surfactant-associated protein A1 ... 29 7.9
92COL40_CAEEL (P34804) Cuticle collagen 40 29 7.9 
>Y531_METJA (Q57951) Hypothetical protein MJ0531|
          Length = 170

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 25/78 (32%), Positives = 48/78 (61%)
 Frame = -3

Query: 553 KETLEILAQVAHQSGVEVFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGS 374
           +E L+ + ++A + GV++  ++  G P  ++ E  +      +V+G+ G + L+R L+GS
Sbjct: 89  QEALKKVKKMAEEWGVKIHTEMLEGVPANEIVEFAEKKKADLIVMGTTGKTGLERILLGS 148

Query: 373 VSTYVVNHAACPVTVVKE 320
           V+  V+ +A CPV VVK+
Sbjct: 149 VAERVIKNAHCPVLVVKK 166
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>YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I|
          Length = 601

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = -3

Query: 553 KETLEILAQVAHQSGVEVFVKIFYGDPIKKLC-EAVDLVPLGCLVIGSRGLSTLKRALMG 377
           K  L++L++   +  VEV +++ + +  K L  E +D +    +V+GSRG S LK  L+G
Sbjct: 494 KYILKLLSKTVLE--VEVNIEVIHHEKAKHLIIEMIDYIEPSLVVMGSRGRSHLKGVLLG 551

Query: 376 SVSTYVVNHAACPVTVVKENM 314
           S S Y+VN ++ PV V ++ +
Sbjct: 552 SFSNYLVNKSSVPVMVARKKL 572
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>Y1388_SYNY3 (P74148) Hypothetical protein sll1388|
          Length = 154

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 23/77 (29%), Positives = 40/77 (51%)
 Frame = -3

Query: 553 KETLEILAQVAHQSGVEVFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGS 374
           +E L+ + Q   + GV     +  G+P + + +         +V+G RGL  L    +GS
Sbjct: 77  REWLQSIVQQVQEDGVACEWDVKVGEPGRWIRDMAKNWDADLVVLGRRGLKGLAEVFLGS 136

Query: 373 VSTYVVNHAACPVTVVK 323
           VS+YV++H  C V +V+
Sbjct: 137 VSSYVIHHVQCSVLIVQ 153
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>YXIE_BACSU (P42297) Hypothetical protein yxiE precursor|
          Length = 148

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
 Frame = -3

Query: 553 KETLEILAQV---AHQSGVEVFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRAL 383
           KE L+IL      A + GV+       G+P  ++        +  +V+GSRG+S LK  +
Sbjct: 69  KEGLKILENAKEKAAEKGVQAETIYANGEPAHEILNHAKEKGVSLIVVGSRGISGLKEMM 128

Query: 382 MGSVSTYVVNHAACPVTVVK 323
           +GSVS  V   + CPV +V+
Sbjct: 129 LGSVSHKVSQLSTCPVLIVR 148
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>Y1101_SYNY3 (P72745) Hypothetical protein slr1101|
          Length = 108

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 27/75 (36%), Positives = 36/75 (48%)
 Frame = -3

Query: 550 ETLEILAQVAHQSGVEVFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSV 371
           +TLE   Q A    +E   +   G P K +C+         +V+G RG   L   L+GSV
Sbjct: 30  DTLEKRRQQALALDIECQAEQILGSPGKIICQRAKQDNSDIIVVGHRGRWGLSEILLGSV 89

Query: 370 STYVVNHAACPVTVV 326
             YV +HA C V VV
Sbjct: 90  GNYVFHHAHCCVFVV 104
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>Y2028_MYCBO (P64922) Hypothetical protein Mb2028c|
          Length = 295

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = -3

Query: 493 KIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVV 326
           ++ +  P+  + E  +   +  +V+GS G   L R L+GSVS+ +V  A CPV V+
Sbjct: 94  ELVFSTPVPTMVEISNEAEM--VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVI 147



 Score = 30.8 bits (68), Expect = 2.7
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = -3

Query: 475 PIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVKEN 317
           P +KL +      L  +V+GS G   L   L+GSVS  V++ A  PV V +++
Sbjct: 245 PARKLVQKSASAQL--VVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
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>Y2005_MYCTU (P64921) Hypothetical protein Rv2005c/MT2061|
          Length = 295

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = -3

Query: 493 KIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVV 326
           ++ +  P+  + E  +   +  +V+GS G   L R L+GSVS+ +V  A CPV V+
Sbjct: 94  ELVFSTPVPTMVEISNEAEM--VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVI 147



 Score = 30.8 bits (68), Expect = 2.7
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = -3

Query: 475 PIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVKEN 317
           P +KL +      L  +V+GS G   L   L+GSVS  V++ A  PV V +++
Sbjct: 245 PARKLVQKSASAQL--VVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQS 295
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>NHAX_BACSU (O07552) Stress response protein nhaX|
          Length = 166

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = -3

Query: 547 TLEILAQ---VAHQSGVEVFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMG 377
           T E++A+   + ++   +  + I  GDP + + E  + +    +V GSR  + LK+ + G
Sbjct: 89  TEEVIAEARMMLNEQQADGDIDILEGDPAESIIEHANRISADMIVTGSRDQNRLKKLIFG 148

Query: 376 SVSTYVVNHAACPVTVVK 323
           SVS  +   +  PV +VK
Sbjct: 149 SVSEKLSAKSDIPVLIVK 166
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>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)|
            (LC collagen)
          Length = 2944

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
 Frame = -2

Query: 554  QGDAGDPGPSG-----ASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQE 390
            +GD GDPGP G       ERG      +   P +  + G  PG +   G   +  E  + 
Sbjct: 2005 KGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGL-PGRAGGVGEAGRPGERGER 2063

Query: 389  GSDGER-EHLRCEPRGLPG 336
            G  GER E  R  P GLPG
Sbjct: 2064 GEKGERGEQGRDGPPGLPG 2082



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 14/73 (19%)
 Frame = -2

Query: 551  GDAGDPGPSGA------------SERG--*GLCEDILWRPDQEAVRGS*PGSSRLPGHRK 414
            G  G+PGP+GA             E+G   GL  D++  P  +  RG       LPG R 
Sbjct: 2287 GPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRG-------LPGPRG 2339

Query: 413  QRSEHAQEGSDGE 375
            ++ E  + G  G+
Sbjct: 2340 EKGEAGRAGEPGD 2352



 Score = 29.3 bits (64), Expect = 7.9
 Identities = 33/102 (32%), Positives = 41/102 (40%), Gaps = 23/102 (22%)
 Frame = -2

Query: 554  QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRG-----------S*PGSS--------- 435
            +G+ G PGPSG  ERG      +   P +E + G             PG+S         
Sbjct: 2412 RGEMGQPGPSG--ERG------LAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDP 2463

Query: 434  --RLPGHRKQRSEHAQEGSDGEREHLRCEPRGLPG-HGREGE 318
               LPG R +R E    G DG     +  PRGL G  G  GE
Sbjct: 2464 GVGLPGPRGERGEPGIRGEDGRPG--QEGPRGLTGPPGSRGE 2503
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>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor|
          Length = 1496

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
 Frame = -2

Query: 554  QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
            +GD GDPGP+G               P  +   G+ PG    PG   QR +    GS G 
Sbjct: 1064 RGDRGDPGPAGL--------------PGSQGAPGT-PGPVGAPGDAGQRGD---PGSRGP 1105

Query: 374  REHL-RCEPRGLPG----HGREGEH 315
              HL R   RGLPG     G +G+H
Sbjct: 1106 IGHLGRAGKRGLPGPQGPRGDKGDH 1130
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>Y577_METJA (Q57997) Protein MJ0577|
          Length = 162

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 22/77 (28%), Positives = 40/77 (51%)
 Frame = -3

Query: 553 KETLEILAQVAHQSGVEVFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGS 374
           K  +E + +     G +V   I  G P +++ +  +   +  +++GS G + LK  L+GS
Sbjct: 82  KNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGS 141

Query: 373 VSTYVVNHAACPVTVVK 323
           V+  V+  +  PV VVK
Sbjct: 142 VTENVIKKSNKPVLVVK 158
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>Y1654_SYNY3 (P72817) Hypothetical protein sll1654|
          Length = 157

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = -3

Query: 544 LEILAQVAHQSGVEVFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVST 365
           LE    V  Q G+        G     +C+  D V    +V+G RGL      +  SV+ 
Sbjct: 84  LEAAQAVFSQQGIATKTIEREGMASFTICDVADEVNADLIVMGCRGLGLTTEGVAESVTA 143

Query: 364 YVVNHAACPVTVV 326
            V+N + CPV VV
Sbjct: 144 RVINLSPCPVLVV 156
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>Y2019_MYCBO (P0A5F8) Hypothetical protein Mb2019|
          Length = 317

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = -3

Query: 427 LVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVKE 320
           +V+G RG   +  AL+GSVS+ +V HA  PV V+ E
Sbjct: 125 VVLGYRGQGAVAGALLGSVSSSLVRHAHGPVAVIPE 160
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>Y1996_MYCTU (P0A5F7) Hypothetical protein Rv1996/MT2052|
          Length = 317

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = -3

Query: 427 LVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVKE 320
           +V+G RG   +  AL+GSVS+ +V HA  PV V+ E
Sbjct: 125 VVLGYRGQGAVAGALLGSVSSSLVRHAHGPVAVIPE 160
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>USPE_PHOLL (P60005) Universal stress protein E|
          Length = 314

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = -3

Query: 505 EVFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVV 326
           E +  I  G P   + +  D +  G +V+G  G + L  A +G+ + +V++H  C +  +
Sbjct: 241 EKYTHIHEGLPESVIPQMCDEMNAGIIVLGILGRTGLSAAFLGNTAEHVIDHLKCDILTI 300

Query: 325 K 323
           K
Sbjct: 301 K 301
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>YQA3_THEAQ (P74897) Hypothetical 14.6 kDa protein in QAH/OAS sulfhydrylase|
           3'region
          Length = 137

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -3

Query: 490 IFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           +  G P + + +A        +V+G+RGL  +    +GS S  VV  A CPV +V+
Sbjct: 82  LLQGRPAEAILQAAIGEKADLIVMGTRGLGAVGSLFLGSQSQKVVAEAPCPVLLVR 137
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>CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor|
          Length = 1028

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
 Frame = -2

Query: 551 GDAGDPGPSGA-SERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           GD G+PGP GA  ERG          P +   RG+       PG R  R +  + G  G+
Sbjct: 410 GDEGNPGPDGAPGERG---------GPGERGPRGT-------PGPRGPRGDPGEAGPQGD 453

Query: 374 REHLRCEPRGLPGHGREGEHVAAACYR 294
           +   R  P G+PG   E   +    YR
Sbjct: 454 QG--REGPVGVPGDPGEAGPIGPKGYR 478



 Score = 32.3 bits (72), Expect = 0.93
 Identities = 29/85 (34%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           +G AG+PGP G  E+G             EA     PG    PG R    E    G+ G 
Sbjct: 394 EGPAGEPGPPG--EKG-------------EAGDEGNPGPDGAPGERGGPGERGPRGTPGP 438

Query: 374 REHLRCEPRGLPG-------HGREG 321
           R      PRG PG        GREG
Sbjct: 439 R-----GPRGDPGEAGPQGDQGREG 458
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>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor|
          Length = 921

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           GD G PGP G++             P +  +RG   GS  LPG    R      G  GE+
Sbjct: 694 GDIGLPGPKGSAGN-----------PGEPGLRGP-EGSRGLPGVEGPRGPPGPRGVQGEQ 741

Query: 371 EHLRCEP-RGLPGHGREGEHVAAACYRCMMIH 279
                   +G PG     +H+   C R +  H
Sbjct: 742 GATGLPGVQGPPGRAPTDQHIKQVCMRVIQEH 773



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 26/72 (36%), Positives = 27/72 (37%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G  G PGP G  E G          P Q  +RG  PG    PG    R      G  GER
Sbjct: 796 GPPGPPGPPG--ENG---------FPGQMGIRGL-PGIKGPPGALGLRGPKGDLGEKGER 843

Query: 371 EHLRCEPRGLPG 336
                 P GLPG
Sbjct: 844 GPPGRGPNGLPG 855
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>COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor|
          Length = 3063

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 29/80 (36%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
 Frame = -2

Query: 551  GDAGDPGPSG-ASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
            G  G PGP G A  RG             E   G  PG    PG +    E    G  GE
Sbjct: 2942 GPPGPPGPPGSAGARG-------------EPGPGGRPGFPGTPGMQGPPGERGLPGEKGE 2988

Query: 374  REHLRCEPRGLPG-HGREGE 318
            R      PRGLPG  G +GE
Sbjct: 2989 RGTGSSGPRGLPGPPGPQGE 3008
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>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor|
          Length = 921

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           GD G PGP G+           +  P +  +RG   G   LPG    R      G  GE+
Sbjct: 694 GDMGQPGPKGS-----------VGNPGEPGLRGP-EGIRGLPGVEGPRGPPGPRGMQGEQ 741

Query: 371 EHLRCEP-RGLPGHGREGEHVAAACYRCMMIH 279
                   +G PG     +H+   C R +  H
Sbjct: 742 GATGLPGIQGPPGRAPTDQHIKQVCMRVVQEH 773



 Score = 30.8 bits (68), Expect = 2.7
 Identities = 26/72 (36%), Positives = 28/72 (38%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G  G PGP G  E G          P Q  +RG  PG    PG    R      G  GER
Sbjct: 796 GPPGPPGPPG--ENG---------FPGQMGIRGL-PGIKGPPGALGLRGPKGDLGEKGER 843

Query: 371 EHLRCEPRGLPG 336
                 P+GLPG
Sbjct: 844 GPPGRGPKGLPG 855
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>Y1154_METTH (O27222) Hypothetical protein MTH1154|
          Length = 146

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 17/53 (32%), Positives = 33/53 (62%)
 Frame = -3

Query: 481 GDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           GDP  ++ +  +   +  +V+G+ G S + + L+GSVS  VV++A C + +V+
Sbjct: 93  GDPADEIVKVAEEEDVDVIVMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHLVR 144
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>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)|
          Length = 3124

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 29/80 (36%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
 Frame = -2

Query: 551  GDAGDPGPSGAS-ERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
            G  G PGP GA+  RG             E   G  PG    PG +    E    G  GE
Sbjct: 2946 GPPGPPGPPGAAGTRG-------------EPGPGGRPGFPGPPGVQGPPGERGMPGEKGE 2992

Query: 374  REHLRCEPRGLPG-HGREGE 318
            R      PRGLPG  G +GE
Sbjct: 2993 RGTGSQGPRGLPGPPGPQGE 3012
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>CO9A1_RAT (P20850) Collagen alpha-1(IX) chain (Fragment)|
          Length = 325

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           GD G PGP G+           +  P +  +RG   G   LPG    R      G  GE+
Sbjct: 98  GDMGQPGPKGS-----------VGNPGEPGLRGP-EGIRGLPGVEGPRGPPGPRGVQGEQ 145

Query: 371 EHLRCEP-RGLPGHGREGEHVAAACYRCMMIH 279
                   +G PG     +H+   C R +  H
Sbjct: 146 GATGLPGIQGPPGRAPTDQHIKQVCMRVVQEH 177



 Score = 30.8 bits (68), Expect = 2.7
 Identities = 26/72 (36%), Positives = 28/72 (38%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G  G PGP G  E G          P Q  +RG  PG    PG    R      G  GER
Sbjct: 200 GPPGPPGPPG--ENG---------FPGQMGIRGL-PGIKGPPGALGLRGPKGDLGEKGER 247

Query: 371 EHLRCEPRGLPG 336
                 P+GLPG
Sbjct: 248 GPPGRGPKGLPG 259
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>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)|
          Length = 1027

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*--PGSSRLPGHRKQRSEHAQEGSDG 378
           G AG PG +GA   G    E    RP    V+GS   PG    PGH  +  +    GS G
Sbjct: 250 GTAGSPGQAGAKGDGGPTGEQ--GRPGAPGVKGSSGPPGDVGAPGHAGEAGKRGSPGSPG 307

Query: 377 EREHLRCEPRGLPG 336
                   P G PG
Sbjct: 308 --------PAGSPG 313
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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 21/73 (28%), Positives = 34/73 (46%)
 Frame = +2

Query: 326  HDRDRAGRVVHNVGAHAPHQSPLERAQTSASDDQAAERNQVNCLAQLLDRVAIEYLHKDL 505
            HD  ++ +   N G+ +P QSP  R + S   D     +  N   +LL +V      + L
Sbjct: 817  HDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQESRSL 876

Query: 506  NPALMRHLGQDLQ 544
            +P+   HL +D Q
Sbjct: 877  SPS---HLTEDRQ 886
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>SFTPA_MACMU (Q9TUC5) Pulmonary surfactant-associated protein A (SP-A) (PSP-A)|
           (PSAP) (Fragment)
          Length = 165

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 31/100 (31%), Positives = 41/100 (41%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G  GDPGP G      G   D+   P  + +    PG+  +PG      E  ++G  GER
Sbjct: 1   GVKGDPGPPGPM----GPPGDMPCFPGNDGL----PGAPGIPG------ECGEKGEPGER 46

Query: 371 EHLRCEPRGLPGHGREGEHVAAACYRCMMIHTRR*YRLQE 252
                 P GLP H  E        +R  ++ TR    LQE
Sbjct: 47  -----GPPGLPAHLDEELQATLHDFRHQILQTRGALSLQE 81
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>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)|
          Length = 747

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 33/99 (33%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G+AG PG SG  ERG          P  +  RG  PG+  LPG +  R     +G+ GE 
Sbjct: 70  GEAGKPGKSG--ERG---------PPGPQGARGF-PGTPGLPGVKGHRGYPGLDGAKGEA 117

Query: 371 EHLRCE----------------PRGLPG-HGREGEHVAA 306
                +                PRGLPG  GR G   AA
Sbjct: 118 GAPGVKGESGSPGZBGSPGPMGPRGLPGERGRTGPAGAA 156
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>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2)
          Length = 1497

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDI---LWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGS 384
           +GD G PGP G  +RG      I   L  P  +  +G   GS   PG      +  +EG 
Sbjct: 572 KGDMGSPGPKG--DRGFPGTPGIPGPLGHPGPQGPKGQ-KGSVGDPGMEGPMGQRGREGP 628

Query: 383 DGEREHLRCEPRGLPGHGREGEHVAA 306
            G R        G PG G +GE  AA
Sbjct: 629 MGPRGE-----AGPPGSGEKGERGAA 649
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>CLPB_CHRVO (Q7NWN7) Chaperone clpB|
          Length = 859

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +2

Query: 218 LLVTRCFATTTVLADGIIFLYVSSYIGSKLQLHVLLHDRDRAGRVV-HNVGAHAPHQSPL 394
           + V+R  A    +AD I       +I S+L L  L  D+  AGR++  + G HA  Q+ +
Sbjct: 81  ITVSRDLANLLNIADKIAMKLGDEFIASELYLSALSQDKGEAGRLLKEHGGNHASIQAAI 140

Query: 395 ERAQTSASDDQAAERNQVNCL 457
           +  +   S + A    Q   L
Sbjct: 141 DAVRGGESVNSADAEGQREAL 161
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>USPF_SALTY (P67091) Universal stress protein F|
          Length = 144

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/77 (28%), Positives = 34/77 (44%)
 Frame = -3

Query: 553 KETLEILAQVAHQSGVEVFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGS 374
           K  LE + +  +     V   +  G P  K+ E    +P   ++I S     +   L+GS
Sbjct: 69  KSQLEAIIKKFNLPADRVQAHVAEGSPKDKILEMAKKLPADMVIIASHR-PDITTYLLGS 127

Query: 373 VSTYVVNHAACPVTVVK 323
            +  VV HA C V VV+
Sbjct: 128 NAAAVVRHAECSVLVVR 144
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>USPF_SALTI (P67092) Universal stress protein F|
          Length = 144

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/77 (28%), Positives = 34/77 (44%)
 Frame = -3

Query: 553 KETLEILAQVAHQSGVEVFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGS 374
           K  LE + +  +     V   +  G P  K+ E    +P   ++I S     +   L+GS
Sbjct: 69  KSQLEAIIKKFNLPADRVQAHVAEGSPKDKILEMAKKLPADMVIIASHR-PDITTYLLGS 127

Query: 373 VSTYVVNHAACPVTVVK 323
            +  VV HA C V VV+
Sbjct: 128 NAAAVVRHAECSVLVVR 144
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>USPE_SALTY (Q8ZP84) Universal stress protein E|
          Length = 314

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = -3

Query: 481 GDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           G P + + +  + +  G +V+G+ G + L  A +G+ +  V++H  C + V+K
Sbjct: 247 GLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVIDHLRCDLLVIK 299
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>USPE_SALTI (Q8Z788) Universal stress protein E|
          Length = 314

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = -3

Query: 481 GDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           G P + + +  + +  G +V+G+ G + L  A +G+ +  V++H  C + V+K
Sbjct: 247 GLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVIDHLRCDLLVIK 299
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>USPF_SHIFL (P0A4P8) Universal stress protein F|
          Length = 144

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -3

Query: 502 VFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           V V +  G P  ++ E    +P   ++I S     +   L+GS +  VV HA C V VV+
Sbjct: 86  VHVHVEEGSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144
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>USPF_ECOLI (P37903) Universal stress protein F|
          Length = 144

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -3

Query: 502 VFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           V V +  G P  ++ E    +P   ++I S     +   L+GS +  VV HA C V VV+
Sbjct: 86  VHVHVEEGSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144
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>USPF_ECOL6 (P0A4P6) Universal stress protein F|
          Length = 144

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -3

Query: 502 VFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           V V +  G P  ++ E    +P   ++I S     +   L+GS +  VV HA C V VV+
Sbjct: 86  VHVHVEEGSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144
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>USPF_ECO57 (P0A4P7) Universal stress protein F|
          Length = 144

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -3

Query: 502 VFVKIFYGDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           V V +  G P  ++ E    +P   ++I S     +   L+GS +  VV HA C V VV+
Sbjct: 86  VHVHVEEGSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144
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>MUCR_RHISN (P55363) Transcriptional regulatory protein mucR homolog|
          Length = 143

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/64 (28%), Positives = 36/64 (56%)
 Frame = +2

Query: 266 IIFLYVSSYIGSKLQLHVLLHDRDRAGRVVHNVGAHAPHQSPLERAQTSASDDQAAERNQ 445
           I+  YVS+++    +L  L+ D   A   ++N  A AP  +P+E+ + + S  ++ + +Q
Sbjct: 20  IVAAYVSTHVVPGAELPTLIADVHSA---LNNATAPAPVIAPIEKPKPAVSIRKSVQDDQ 76

Query: 446 VNCL 457
           + CL
Sbjct: 77  ITCL 80
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>CMGA_MOUSE (P26339) Chromogranin A precursor (CgA) [Contains: Pancreastatin;|
           Beta-granin; WE-14]
          Length = 463

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
 Frame = -2

Query: 473 DQEAVRGS*P--GSSRLPGHRKQRSEHAQEGSDGEREHLRCEPRGL---PGHGREGEH 315
           D +AV G      S  LP   K   EH+Q+  DGE E +   P+GL    G GRE EH
Sbjct: 281 DSQAVDGDGKTEASEALPSEGKGELEHSQQEEDGE-EAMVGTPQGLFPQGGKGRELEH 337
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>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor|
          Length = 1840

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -2

Query: 554  QGDAGDPGPSGA-SERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDG 378
            +G++G  GP+G   ERG    +     P  +   G  PG   LPGH  QR E   +G  G
Sbjct: 935  KGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGP-PGKDGLPGHPGQRGETGFQGKTG 993

Query: 377  EREHLRCEPRGLPG 336
                    P G PG
Sbjct: 994  --------PPGPPG 999
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>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor|
          Length = 1840

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -2

Query: 554  QGDAGDPGPSGA-SERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDG 378
            +G++G  GP+G   ERG    +     P  +   G  PG   LPGH  QR E   +G  G
Sbjct: 935  KGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGP-PGKDGLPGHPGQRGETGFQGKTG 993

Query: 377  EREHLRCEPRGLPG 336
                    P G PG
Sbjct: 994  --------PPGPPG 999
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>USPE_SHIFL (P0AAC3) Universal stress protein E|
          Length = 315

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/53 (24%), Positives = 30/53 (56%)
 Frame = -3

Query: 481 GDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           G P + + +  + +  G +V+G+ G + +  A +G+ +  V++H  C + V+K
Sbjct: 247 GLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK 299
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>USPE_ECOLI (P0AAC0) Universal stress protein E|
          Length = 315

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/53 (24%), Positives = 30/53 (56%)
 Frame = -3

Query: 481 GDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           G P + + +  + +  G +V+G+ G + +  A +G+ +  V++H  C + V+K
Sbjct: 247 GLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK 299
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>USPE_ECOL6 (P0AAC1) Universal stress protein E|
          Length = 315

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/53 (24%), Positives = 30/53 (56%)
 Frame = -3

Query: 481 GDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           G P + + +  + +  G +V+G+ G + +  A +G+ +  V++H  C + V+K
Sbjct: 247 GLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK 299
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>USPE_ECO57 (P0AAC2) Universal stress protein E|
          Length = 315

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/53 (24%), Positives = 30/53 (56%)
 Frame = -3

Query: 481 GDPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           G P + + +  + +  G +V+G+ G + +  A +G+ +  V++H  C + V+K
Sbjct: 247 GLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK 299
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>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor|
          Length = 684

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           +GD G PGP G            +  P  E       G + +PG   Q+ E  + G+ GE
Sbjct: 279 KGDLGRPGPKGTPG---------VAGPSGEPGMPGKDGQNGVPGLDGQKGEAGRNGAPGE 329

Query: 374 REHLRCEPRGLPG-HGREG 321
           +      P GLPG  GR G
Sbjct: 330 K-----GPNGLPGLPGRAG 343



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 30/90 (33%), Positives = 34/90 (37%), Gaps = 11/90 (12%)
 Frame = -2

Query: 554 QGDAGDPGPSG-------ASERG*GLCEDILWRPDQEAVRG--S*PGSSRLPGHRKQRSE 402
           +GD G PGP+G          RG       L  P      G    PG    PG    R E
Sbjct: 210 KGDPGPPGPAGLPGSVGLQGPRGLRGLPGPLGPPGDRGPIGFRGPPGIPGAPGKAGDRGE 269

Query: 401 HAQEGSDGEREHL-RCEPRGLPG-HGREGE 318
              EG  G +  L R  P+G PG  G  GE
Sbjct: 270 RGPEGFRGPKGDLGRPGPKGTPGVAGPSGE 299
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>YB54_METTM (Q50777) Hypothetical 16.1 kDa protein in MTR region (ORF143)|
          Length = 143

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = -3

Query: 478 DPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           D I KL E  D+     ++I   G S + + L+GSVS  VV++A C + +V+
Sbjct: 94  DEIVKLAEEEDVD----VIIMGTGKSLVDKHLLGSVSEKVVHYAPCTIHLVR 141
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>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor|
          Length = 1838

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -2

Query: 554  QGDAGDPGPSGA-SERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDG 378
            +G++G  GP+G   ERG    +     P  +   G  PG   LPGH  QR E   +G  G
Sbjct: 933  KGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGP-PGKDGLPGHPGQRGETGFQGKTG 991

Query: 377  EREHLRCEPRGLPG 336
                    P G PG
Sbjct: 992  --------PPGPPG 997
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>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor|
          Length = 1838

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -2

Query: 554  QGDAGDPGPSGA-SERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDG 378
            +G++G  GP+G   ERG    +     P  +   G  PG   LPGH  QR E   +G  G
Sbjct: 933  KGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGP-PGKDGLPGHPGQRGETGFQGKTG 991

Query: 377  EREHLRCEPRGLPG 336
                    P G PG
Sbjct: 992  --------PPGPPG 997
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>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1419

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G+AG PG +G  ERG          P  +  RG  PG+  LPG +  R     +G+ GE 
Sbjct: 187 GEAGKPGKAG--ERG---------LPGPQGARGF-PGTPGLPGVKGHRGYPGLDGAKGEA 234

Query: 371 EHLRCE----------------PRGLPG-HGREGEHVAA 306
                +                PRGLPG  GR G   AA
Sbjct: 235 GAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAA 273
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>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1418

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G+AG PG +G  ERG          P  +  RG  PG+  LPG +  R     +G+ GE 
Sbjct: 186 GEAGKPGKAG--ERG---------PPGPQGARGF-PGTPGLPGVKGHRGYPGLDGAKGEA 233

Query: 371 EHLRCE----------------PRGLPG-HGREGEHVAA 306
                +                PRGLPG  GR G   AA
Sbjct: 234 GAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAA 272



 Score = 29.3 bits (64), Expect = 7.9
 Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
 Frame = -2

Query: 554  QGDAGDPGPSGA----SERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEG 387
            +G+ GD GPSGA      +G      I+  P Q   RG  PG   LPG   +  +    G
Sbjct: 887  KGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGF-PG---LPGPSGEPGQQGAPG 942

Query: 386  SDGER-EHLRCEPRGLPG----HGREG 321
            + G+R       P GL G     GREG
Sbjct: 943  ASGDRGPPGPVGPPGLTGPAGEPGREG 969
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>SFTPA_MOUSE (P35242) Pulmonary surfactant-associated protein A precursor (SP-A)|
           (PSP-A) (PSAP)
          Length = 248

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 24/73 (32%), Positives = 26/73 (35%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           +GD G PGP G      GL                 PG   LPG      EH  +G  GE
Sbjct: 51  KGDPGPPGPMGPPGGMPGL-----------------PGRDGLPGAPGAPGEHGDKGEPGE 93

Query: 374 REHLRCEPRGLPG 336
                   RGLPG
Sbjct: 94  --------RGLPG 98
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>CO6A1_MOUSE (Q04857) Collagen alpha-1(VI) chain precursor|
          Length = 1025

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGS---SRLPGHRKQRSEHAQEGS 384
           +GD G+PGP G  E+G    E           RG  PG       PG R  R +  + G 
Sbjct: 393 EGDPGEPGPPG--EKGEAGDEGNAGPDGAPGERGG-PGERGPRGTPGVRGPRGDPGEAGP 449

Query: 383 DGEREHLRCEPRGLPGHGREGEHVAAACYR 294
            G++   R  P G+PG   E   +    YR
Sbjct: 450 QGDQG--REGPVGIPGDSGEAGPIGPKGYR 477
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>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)|
          Length = 1362

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 16/94 (17%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*-----PGSSRLPGHRKQRSEHAQE 390
           +G  G PGP+G S         ++  P     +G       PG++  PG      E  + 
Sbjct: 325 RGIPGPPGPAGPSG-----ARGLVGEPGPAGAKGESGNKGEPGAAGPPGPPGPSGEEGKR 379

Query: 389 GSDGE--------REHLRCEP--RGLPG-HGREG 321
           GS+GE           LR EP  RGLPG  GR G
Sbjct: 380 GSNGEPGSAGPPGPAGLRGEPGSRGLPGADGRAG 413
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>COL8_CAEEL (P18833) Cuticle collagen 8 precursor|
          Length = 282

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
 Frame = -2

Query: 554 QGDAGDPGPSGA----SERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEG 387
           QGDAG PG +G       RG    E   +RP Q A R   PG    PG         ++G
Sbjct: 179 QGDAGRPGAAGCPGPPGPRGEPGTE---YRPGQ-AGRAGPPGPRGPPGPEGNPGGAGEDG 234

Query: 386 SDGEREHLRCEPR-GLPG-HGREGEH 315
           + G   H     R G+PG  G  GEH
Sbjct: 235 NQGPVGHPGVPGRPGIPGKSGTCGEH 260
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>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)|
          Length = 911

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 22/58 (37%), Positives = 26/58 (44%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDG 378
           G  G PGP G  ERG    +  +  P  +   G  PG   LPGH  QR E   +G  G
Sbjct: 674 GGDGPPGPPG--ERGPQGPQGPVGFPGPKGPPGP-PGKDGLPGHPGQRGETGFQGKTG 728



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 23/96 (23%)
 Frame = -2

Query: 554 QGDAGDPGPSG-------------ASERG*GLCEDILWRPDQEAVRG-----S*PGSSRL 429
           +G+ GDPGP G               +RG    +     P +   +G       PG    
Sbjct: 319 KGEMGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGD 378

Query: 428 PGHRKQRSEHAQEGSDGEREHLRCE-----PRGLPG 336
            GHR +R      G  GE + +R E     PRGLPG
Sbjct: 379 KGHRGERGPQGPPGPPGE-DGIRGEDGEIGPRGLPG 413
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>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor|
          Length = 1691

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/73 (31%), Positives = 31/73 (42%)
 Frame = -2

Query: 554  QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
            +GD G+PGP G       +    LW    +  +GS  GS+  PG R  + E  + G    
Sbjct: 944  KGDRGNPGPVGIPSPRRPMSN--LWLKGDKGSQGS-AGSNGFPGPRGDKGEAGRPG---- 996

Query: 374  REHLRCEPRGLPG 336
                   P GLPG
Sbjct: 997  -------PPGLPG 1002
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>AGC1_ASHGO (Q75AH6) Mitochondrial aspartate-glutamate transporter AGC1|
           (Aspartate-glutamate carrier 1)
          Length = 911

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 14/59 (23%), Positives = 29/59 (49%)
 Frame = +2

Query: 344 GRVVHNVGAHAPHQSPLERAQTSASDDQAAERNQVNCLAQLLDRVAIEYLHKDLNPALM 520
           G V   +GA   +   + + +  A  D +  +N ++CL ++L +  +  L+  L P L+
Sbjct: 530 GSVAGCIGAMVVYPIDMVKTRMQAQRDFSKYKNSIDCLLKILSKEGVRGLYSGLGPQLI 588
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>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor|
          Length = 1806

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 10/69 (14%)
 Frame = -2

Query: 554  QGDAGDPGPSGAS----------ERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRS 405
            +G  G PGP G S          ERG    +  +  P  +   G  PG   LPGH  QR 
Sbjct: 894  RGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGP-PGKDGLPGHPGQRG 952

Query: 404  EHAQEGSDG 378
            E   +G  G
Sbjct: 953  ETGFQGKTG 961



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 22/95 (23%)
 Frame = -2

Query: 554 QGDAGDPGPSG-------------ASERG*GLCEDILWRPDQEAVRG--S*PGSSRLPGH 420
           +G++GDPGP G               +RG    +     P +   +G     G   LPG 
Sbjct: 552 KGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGD 611

Query: 419 RKQRSEHAQE------GSDGER-EHLRCEPRGLPG 336
           +  R E   +      G DG R E     PRGLPG
Sbjct: 612 KGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPG 646



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 15/87 (17%)
 Frame = -2

Query: 551  GDAGDPGPSG-ASERG*GLCEDILWRPDQEAVRGS-----*PGS---------SRLPGHR 417
            G  GDPGPSG A E+G      +   P ++  +GS      PG+         +  PG R
Sbjct: 820  GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPR 879

Query: 416  KQRSEHAQEGSDGEREHLRCEPRGLPG 336
             QR      GS G R      P G PG
Sbjct: 880  GQRGPTGPRGSRGAR-----GPTGKPG 901
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>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1459

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 33/99 (33%), Positives = 39/99 (39%), Gaps = 17/99 (17%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G+AG PG SG  ERG          P     RG  PG+  LPG +  R     +G+ GE 
Sbjct: 227 GEAGKPGKSG--ERG---------LPGPMGARGF-PGTPGLPGVKGHRGYPGLDGAKGEA 274

Query: 371 EHLRCE----------------PRGLPG-HGREGEHVAA 306
                +                PRGLPG  GR G   AA
Sbjct: 275 GAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAA 313



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDG 378
           +G+AG PGPSG++       E     P   A     PG+   PG +  + E  Q+G  G
Sbjct: 775 KGEAGPPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAG 833
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>COL13_CAEEL (P20631) Cuticle collagen 13 precursor|
          Length = 316

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G  G PGP+GA  +           P  +   G+ PG+   PG      +  + GS+G  
Sbjct: 246 GPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGA-PGAPGAPGQAGAPGQDGESGSEGAC 304

Query: 371 EHLRCEPRGLPGH 333
           +H    PR  PG+
Sbjct: 305 DHCP-PPRTAPGY 316
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>COL12_CAEEL (P20630) Cuticle collagen 12 precursor|
          Length = 316

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G  G PGP+GA  +           P  +   G+ PG+   PG      +  + GS+G  
Sbjct: 246 GPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGA-PGAPGAPGQAGAPGQDGESGSEGAC 304

Query: 371 EHLRCEPRGLPGH 333
           +H    PR  PG+
Sbjct: 305 DHCP-PPRTAPGY 316
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>COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor|
          Length = 3119

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 28/80 (35%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
 Frame = -2

Query: 551  GDAGDPGPSG-ASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
            G  G PGP G A  RG             E   G  PG    PG +    E    G  GE
Sbjct: 2943 GPPGPPGPPGSAGARG-------------EPGPGGRPGFPGTPGMQGPPGERGLPGEKGE 2989

Query: 374  REHLRCEPRGLPG-HGREGE 318
            R      PRG PG  G +GE
Sbjct: 2990 RGTGSQGPRGPPGPPGPQGE 3009
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>CMGA_RAT (P10354) Chromogranin A precursor (CgA) [Contains: Pancreastatin;|
           Beta-granin; WE-14]
          Length = 466

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -2

Query: 473 DQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGEREHLRCEPRGL--PGHGREGE 318
           + +AV G    S  +P   K   EH+Q+  DGE E +   P+GL   G G+E E
Sbjct: 287 ESQAVNGKTGASEAVPSEGKGELEHSQQEEDGE-EAMAGPPQGLFPGGKGQELE 339
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>COLE_LEPMA (P98085) Inner ear-specific collagen precursor (Saccular collagen)|
          Length = 419

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G  G PGP+G      GL  DI  + DQ  V    PG   +PG   ++ +   +G  GER
Sbjct: 88  GLRGPPGPAGLPGAN-GLNGDIGEKGDQGPV--GLPGVPGIPGKPGEKGDPGLKGDKGER 144

Query: 371 --EHLRCEP--RGLPG-HGREG 321
               L+ +P  RG PG +G +G
Sbjct: 145 GFSGLKGDPGERGEPGLNGTKG 166
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>MUCR_RHIME (P55323) Transcriptional regulatory protein mucR|
          Length = 143

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 18/64 (28%), Positives = 35/64 (54%)
 Frame = +2

Query: 266 IIFLYVSSYIGSKLQLHVLLHDRDRAGRVVHNVGAHAPHQSPLERAQTSASDDQAAERNQ 445
           I+  YVS+++    +L  L+ D   A   ++N  A AP   P+E+ + + S  ++ + +Q
Sbjct: 20  IVAAYVSNHVVPVAELPTLIADVHSA---LNNTTAPAPVVVPVEKPKPAVSVRKSVQDDQ 76

Query: 446 VNCL 457
           + CL
Sbjct: 77  ITCL 80
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>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G+AG PG  G  ERG          P  +  RG  PG++ LPG +  R     +G+ G+ 
Sbjct: 222 GEAGKPGRPG--ERG---------PPGPQGARGL-PGTAGLPGMKGHRGFSGLDGAKGDT 269

Query: 371 EHLRCEPRGLPG 336
                 P+G PG
Sbjct: 270 G--PAGPKGEPG 279



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
 Frame = -2

Query: 551 GDAGDPGPSGA-SERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           GD G PGPSGA  ERG          P +  V+G        PG    R  +   G+DG 
Sbjct: 654 GDLGAPGPSGARGERG---------FPGERGVQGP-------PGPAGPRGNNGAPGNDGA 697

Query: 374 REHLRCE----PRGLPG-HGREGEHVAA 306
           +           +G PG  G  GE  AA
Sbjct: 698 KGDTGAPGAPGSQGAPGLQGMPGERGAA 725
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>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G+AG PG  G  ERG          P  +  RG  PG++ LPG +  R     +G+ G+ 
Sbjct: 222 GEAGKPGRPG--ERG---------PPGPQGARGL-PGTAGLPGMKGHRGFSGLDGAKGDA 269

Query: 371 EHLRCEPRGLPG 336
                 P+G PG
Sbjct: 270 G--PAGPKGEPG 279



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
 Frame = -2

Query: 551 GDAGDPGPSGA-SERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           GD G PGPSGA  ERG          P +  V+G        PG    R  +   G+DG 
Sbjct: 654 GDLGAPGPSGARGERG---------FPGERGVQGP-------PGPAGPRGNNGAPGNDGA 697

Query: 374 REHLRCE----PRGLPG-HGREGEHVAA 306
           +           +G PG  G  GE  AA
Sbjct: 698 KGDTGAPGAPGSQGAPGLQGMPGERGAA 725
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>TRC8_DROME (Q7KRW1) Protein TRC8 homolog|
          Length = 809

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
 Frame = +2

Query: 170 ALNTPPSEHTFFVMLL---LLVTRCFATTTVLA-DGIIFLYVSSYIGSKLQLHVLLHDRD 337
           AL T  S+    +M     LLV  C   T VL   G+I ++   YIG   Q ++L +D +
Sbjct: 330 ALATTESDEPLDLMTATQKLLVDGCETMTAVLGMTGVISMFCH-YIGRGFQWYLLTYDDE 388

Query: 338 RAGRVVHNVGAHAPHQSPLERAQTSASDDQAAERNQVNCLAQLLDRVAIEYLHKDLNPAL 517
              + +  V A   +   L+   TS S D+   R   N    LL    + +LH  ++P L
Sbjct: 389 E--KSLGTVSAVLFYILALQTGLTSLSPDKRFIRLCRNLC--LLMTALLHFLHNIVSPIL 444

Query: 518 M 520
           M
Sbjct: 445 M 445
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>ROL6_CAEEL (P20784) Cuticle collagen rol-6 (Protein roller-6)|
          Length = 348

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 30/83 (36%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
 Frame = -2

Query: 554 QGDAGDPGPSGASE-RG*GLCEDILWRPDQEAVRGS*PGSSR---LPGHRKQRSEHAQEG 387
           QG  G  GP+GA   RG         RP ++   G  PG       PG   +      +G
Sbjct: 195 QGPLGPQGPNGAPGLRGMRGARGQPGRPGRDGNPGM-PGDCGPPGAPGSDGKPGSPGGKG 253

Query: 386 SDGEREHLRCEPRGLPGH-GREG 321
            DGER   R  PRG PG  G EG
Sbjct: 254 DDGERPLGRPGPRGPPGEAGPEG 276
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>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)|
          Length = 1262

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = -2

Query: 554 QGDAGDPGPSG-ASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDG 378
           +G  G PGPSG A +RG      +        + GS PGS   PG    + E  + G  G
Sbjct: 508 RGSPGPPGPSGPAGDRGQDGGPGLPGMRGLPGIPGS-PGSDGKPGPPGNQGEPGRSGPPG 566

Query: 377 EREHLRCEPRGLPG 336
                   PRG PG
Sbjct: 567 P-----AGPRGQPG 575
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>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor|
          Length = 1460

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G+AG PG  G  ERG          P  +  RG  PG++ LPG +  R     +G+ G+ 
Sbjct: 229 GEAGKPGRPG--ERG---------PPGPQGARGL-PGTAGLPGMKGHRGFSGLDGAKGDA 276

Query: 371 EHLRCEPRGLPG 336
                 P+G PG
Sbjct: 277 G--PAGPKGEPG 286



 Score = 29.3 bits (64), Expect = 7.9
 Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
 Frame = -2

Query: 551 GDAGDPGPSGA-SERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           GD G PGPSGA  ERG          P +  V+G        PG    R  +   G+DG 
Sbjct: 661 GDLGAPGPSGARGERG---------FPGERGVQGP-------PGPAGPRGANGAPGNDGA 704

Query: 374 REHLRCE----PRGLPG-HGREGEHVAA 306
           +           +G PG  G  GE  AA
Sbjct: 705 KGDAGAPGAPGSQGAPGLQGMPGERGAA 732
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>SFTPA_SHEEP (Q9TT06) Pulmonary surfactant-associated protein A precursor (SP-A)|
           (PSP-A) (PSAP)
          Length = 248

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/70 (32%), Positives = 33/70 (47%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           +GD G PGP G      GL       P ++ + G+ PG   LPG R ++ E  + G  G 
Sbjct: 51  KGDPGPPGPMGPPGGMPGL-------PGRDGMTGA-PG---LPGERGEKGEPGERGPPGF 99

Query: 374 REHLRCEPRG 345
             +L  E +G
Sbjct: 100 PAYLDEELQG 109
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>SFTA2_HUMAN (Q8IWL1) Pulmonary surfactant-associated protein A2 precursor|
           (SP-A2) (SP-A) (PSP-A) (PSPA) (Alveolar proteinosis
           protein) (35 kDa pulmonary surfactant-associated
           protein)
          Length = 248

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 28/100 (28%), Positives = 38/100 (38%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           +GD G PGP G    G   C      P    +    PG+  +PG R ++ E  + G    
Sbjct: 51  KGDPGPPGPMGPP--GETPCP-----PGNNGL----PGAPGVPGERGEKGEAGERG---- 95

Query: 374 REHLRCEPRGLPGHGREGEHVAAACYRCMMIHTRR*YRLQ 255
                  P GLP H  E        +R  ++ TR    LQ
Sbjct: 96  -------PPGLPAHLDEELQATLHDFRHQILQTRGALSLQ 128
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>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor|
          Length = 1464

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G+AG PG  G  ERG          P  +  RG  PG++ LPG +  R     +G+ G+ 
Sbjct: 233 GEAGKPGRPG--ERG---------PPGPQGARGL-PGTAGLPGMKGHRGFSGLDGAKGDA 280

Query: 371 EHLRCEPRGLPG 336
                 P+G PG
Sbjct: 281 G--PAGPKGEPG 290



 Score = 29.3 bits (64), Expect = 7.9
 Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
 Frame = -2

Query: 551 GDAGDPGPSGA-SERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           GD G PGPSGA  ERG          P +  V+G        PG    R  +   G+DG 
Sbjct: 665 GDLGAPGPSGARGERG---------FPGERGVQGP-------PGPAGPRGANGAPGNDGA 708

Query: 374 REHLRCE----PRGLPG-HGREGEHVAA 306
           +           +G PG  G  GE  AA
Sbjct: 709 KGDAGAPGAPGSQGAPGLQGMPGERGAA 736
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>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)|
          Length = 623

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
 Frame = -2

Query: 551 GDAGDPGPSG-ASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           G+ GDPGP G   + G         RP    ++G   GS  L G    + +   +G+ G 
Sbjct: 77  GEVGDPGPRGLLGDPG---------RPGPPGMKGP-SGSPGLDGLHGLKGQKGTKGASGL 126

Query: 374 REHLRCEPRGLPG-HGREGE 318
            E     P G+PG  G +GE
Sbjct: 127 HEMGPPGPMGIPGIKGDKGE 146
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>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)|
          Length = 779

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G+AG PG  G  ERG          P  +  RG  PG++ LPG +  R     +G+ G+ 
Sbjct: 71  GEAGKPGRPG--ERG---------PPGPQGARGL-PGTAGLPGMKGHRGFSGLDGAKGDA 118

Query: 371 EHLRCEPRGLPG 336
                 P+G PG
Sbjct: 119 G--PAGPKGEPG 128
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>SFTPA_BOVIN (Q6RXL1) Pulmonary surfactant-associated protein A (SP-A) (PSP-A)|
           (PSAP) (Fragment)
          Length = 92

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/70 (32%), Positives = 33/70 (47%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           +GD G PGP G      GL       P ++ + G+ PG   LPG R ++ E  + G  G 
Sbjct: 27  KGDPGPPGPMGPPGGMPGL-------PGRDGMTGA-PG---LPGERGEKGEPGERGPPGF 75

Query: 374 REHLRCEPRG 345
             +L  E +G
Sbjct: 76  PAYLDEELQG 85
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>COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor|
          Length = 680

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           QG  G PGPSG   RG                    PG   + G R    E    G  G 
Sbjct: 208 QGPIGPPGPSGVGRRG----------------ENGFPGQPGIKGDRGFPGEMGPSGPPG- 250

Query: 374 REHLRCEPRGLPG-HGREG 321
                  P+G PG  GREG
Sbjct: 251 -------PQGPPGKQGREG 262
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>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor|
          Length = 920

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 34/111 (30%), Positives = 43/111 (38%), Gaps = 22/111 (19%)
 Frame = -2

Query: 554 QGDAGDPGPSG----------ASERG----*GL--CEDILWRPDQEAVRGS*PGSSRLPG 423
           +G AG+PGP G          A E+G     GL   +  +  P     RG   GS  LPG
Sbjct: 664 RGSAGEPGPKGEQGAPGSEGDAGEKGDLGDMGLPGAKGSVGNPGDPGSRGP-EGSRGLPG 722

Query: 422 HRKQRSEHAQEGSDGEREHLRCEPRGLPGH----GRE--GEHVAAACYRCM 288
               R      G  GE+        GLPG     G+E   +H+   C R M
Sbjct: 723 MEGPRGAPGPRGLQGEQ-----GAPGLPGSQGPAGKEPTDQHIKQVCMRVM 768
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>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 15/87 (17%)
 Frame = -2

Query: 551  GDAGDPGPSG-ASERG*GLCEDILWRPDQEAVRGS-----*PGS---------SRLPGHR 417
            G  GDPGPSG A E+G      +   P ++  +GS      PG+         +  PG R
Sbjct: 818  GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPR 877

Query: 416  KQRSEHAQEGSDGEREHLRCEPRGLPG 336
             QR      GS G R      P G PG
Sbjct: 878  GQRGPTGPRGSRGAR-----GPTGKPG 899



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 22/95 (23%)
 Frame = -2

Query: 554 QGDAGDPGPSG-------------ASERG*GLCEDILWRPDQEAVRG--S*PGSSRLPGH 420
           +G++GDPGP G               +RG    +     P +   +G     G   LPG 
Sbjct: 550 KGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGESGSKGDRGFDGLPGLPGD 609

Query: 419 RKQRSEHAQE------GSDGER-EHLRCEPRGLPG 336
           +  R E   +      G DG R E     PRGLPG
Sbjct: 610 KGHRGERGPQGPPGLPGDDGMRGEDGEIGPRGLPG 644
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>COCA1_RAT (P70560) Collagen alpha-1(XII) chain (Fragment)|
          Length = 317

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 28/80 (35%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
 Frame = -2

Query: 551 GDAGDPGPSGAS-ERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           G  G PGP GA+  RG             E   G  PG    PG +    E    G  GE
Sbjct: 141 GPPGPPGPPGAAGARG-------------EPGPGGAPGFPGRPGVQGPPGERGLPGEKGE 187

Query: 374 REHLRCEPRGLPG-HGREGE 318
           R      PRG PG  G +GE
Sbjct: 188 RGIGSQGPRGPPGPPGPQGE 207
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>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor|
          Length = 1690

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
 Frame = -2

Query: 551  GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
            G +G PGP+GA+ R     +DI   PD        PG    PG    R      G  G  
Sbjct: 1236 GSSGPPGPAGATGRA---PKDI---PDPGP-----PGDQGPPGPDGPRGAPGPPGLPGSV 1284

Query: 371  EHLRCEPR--GLPG 336
            + LR EP   GLPG
Sbjct: 1285 DLLRGEPGDCGLPG 1298
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>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor|
          Length = 674

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 23/73 (31%), Positives = 30/73 (41%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           QG  G PGP G  +RG    E+ L  P Q  ++    G   +PG R        +G  GE
Sbjct: 208 QGPTGPPGPPGVGKRG----ENGL--PGQPGLK----GDQGVPGERGAAGPSGPQGPPGE 257

Query: 374 REHLRCEPRGLPG 336
           +        G PG
Sbjct: 258 QGPEGIGKPGAPG 270
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>SFTPA_PIG (P49874) Pulmonary surfactant-associated protein A precursor (SP-A)|
           (PSP-A) (PSAP)
          Length = 249

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/64 (32%), Positives = 29/64 (45%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           +GD G PGP G           +   P Q+ + G+ PG   LPG R ++ E  + G  G 
Sbjct: 51  KGDPGPPGPMGPP-------GGMAGPPGQDGMIGA-PG---LPGERGEKGEPGERGPPGL 99

Query: 374 REHL 363
             HL
Sbjct: 100 PAHL 103
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>AGC1_YEAST (Q12482) Mitochondrial aspartate-glutamate transporter AGC1|
           (Aspartate-glutamate carrier 1)
          Length = 902

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = +2

Query: 344 GRVVHNVGAHAPHQSPLERAQTSASDDQAAERNQVNCLAQLLDRVAIEYLHKDLNPALM 520
           G +   +GA   +     + +  A    A  +N ++CL +++ R  I+ L+  L P L+
Sbjct: 537 GSIAGCIGATVVYPIDFIKTRMQAQRSLAQYKNSIDCLLKIISREGIKGLYSGLGPQLI 595
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>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 26/73 (35%), Positives = 32/73 (43%)
 Frame = -2

Query: 554  QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
            +GDAGDPGP GA     G   DI  + D         G++  PG +    E   +GS G 
Sbjct: 1207 RGDAGDPGPPGAPGIP-GPKGDIGEKGDSGP-----SGAAGPPGKKGPPGEDGAKGSVG- 1259

Query: 374  REHLRCEPRGLPG 336
                   P GLPG
Sbjct: 1260 -------PTGLPG 1265
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>USPG_SALTY (P67093) Universal stress protein G|
          Length = 142

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/52 (38%), Positives = 30/52 (57%)
 Frame = -3

Query: 478 DPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           D + ++ E +D      +VIGSR  S +   L+GS ++ VV HA  PV VV+
Sbjct: 95  DVVNEMGEELDA---DVVVIGSRNPS-ITTHLLGSNASSVVRHATLPVLVVR 142
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>USPG_SALTI (P67094) Universal stress protein G|
          Length = 142

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/52 (38%), Positives = 30/52 (57%)
 Frame = -3

Query: 478 DPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           D + ++ E +D      +VIGSR  S +   L+GS ++ VV HA  PV VV+
Sbjct: 95  DVVNEMGEELDA---DVVVIGSRNPS-ITTHLLGSNASSVVRHATLPVLVVR 142
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>USPG_ECOL6 (Q8FK07) Universal stress protein G|
          Length = 142

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = -3

Query: 478 DPIKKLCEAVDLVPLGCLVIGSRGLSTLKRALMGSVSTYVVNHAACPVTVVK 323
           D + +L + +D      +VIGSR  S +   L+GS ++ V+ HA  PV VV+
Sbjct: 95  DEVNELAKELDA---DVVVIGSRNPS-ISTHLLGSNASSVIRHANLPVLVVR 142
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>SFTA1_HUMAN (Q8IWL2) Pulmonary surfactant-associated protein A1 precursor|
           (SP-A1) (SP-A) (PSP-A) (PSPA) (Alveolar proteinosis
           protein) (35 kDa pulmonary surfactant-associated
           protein)
          Length = 248

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 28/100 (28%), Positives = 40/100 (40%)
 Frame = -2

Query: 554 QGDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGE 375
           +GD G PGP G          ++   P  + +    PG+  +PG      E  ++G  GE
Sbjct: 51  KGDPGPPGPMGPPG-------EMPCPPGNDGL----PGAPGIPG------ECGEKGEPGE 93

Query: 374 REHLRCEPRGLPGHGREGEHVAAACYRCMMIHTRR*YRLQ 255
           R      P GLP H  E        +R  ++ TR    LQ
Sbjct: 94  R-----GPPGLPAHLDEELQATLHDFRHQILQTRGALSLQ 128
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>COL40_CAEEL (P34804) Cuticle collagen 40|
          Length = 306

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 25/73 (34%), Positives = 32/73 (43%)
 Frame = -2

Query: 551 GDAGDPGPSGASERG*GLCEDILWRPDQEAVRGS*PGSSRLPGHRKQRSEHAQEGSDGER 372
           G AG+PG +GASE G          P  +A     PG++  PG      E    GS G  
Sbjct: 245 GPAGNPGSAGASEPGPA-------GPAGDAGPDGAPGNAGAPG---APGEAGAPGSGGGC 294

Query: 371 EHLRCEPRGLPGH 333
           +H    PR  PG+
Sbjct: 295 DHCP-PPRTAPGY 306


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,072,768
Number of Sequences: 219361
Number of extensions: 1463222
Number of successful extensions: 5201
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 4363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5086
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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