Clone Name | rbaak4k07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SYL_BLOFL (Q7VRA6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... | 29 | 2.9 | 2 | SYL_PARUW (Q6MCC8) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... | 28 | 4.9 | 3 | SYL_MANSM (Q65VR5) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... | 28 | 8.3 | 4 | SYL_SHEON (Q8EHP4) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... | 28 | 8.3 |
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>SYL_BLOFL (Q7VRA6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 867 Score = 29.3 bits (64), Expect = 2.9 Identities = 11/35 (31%), Positives = 21/35 (60%) Frame = +1 Query: 16 FYKVWHGTCSDAGQVRT*RPSIRLRLHGMIVVDRY 120 +++ +H D G +++ P+IRL GMI+ D + Sbjct: 546 YFRFYHKLMRDIGLIQSNEPAIRLLCQGMILADSF 580
>SYL_PARUW (Q6MCC8) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 845 Score = 28.5 bits (62), Expect = 4.9 Identities = 13/39 (33%), Positives = 17/39 (43%) Frame = +1 Query: 16 FYKVWHGTCSDAGQVRT*RPSIRLRLHGMIVVDRYDTMM 132 + + WH D G V T P LR G++V Y M Sbjct: 554 YARFWHKVLYDCGYVHTLEPFQTLRNQGLVVARSYQNKM 592
>SYL_MANSM (Q65VR5) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 860 Score = 27.7 bits (60), Expect = 8.3 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +1 Query: 16 FYKVWHGTCSDAGQVRT*RPSIRLRLHGMIVVDRY 120 +++ +H DAG V T P+ +L GM++ D + Sbjct: 540 YFRFFHKLLRDAGLVSTDEPTKKLLCQGMVLADAF 574
>SYL_SHEON (Q8EHP4) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 859 Score = 27.7 bits (60), Expect = 8.3 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +1 Query: 16 FYKVWHGTCSDAGQVRT*RPSIRLRLHGMIVVDRY 120 +++ +H DAG V T P+ +L GM++ D + Sbjct: 538 YFRFFHKLLRDAGLVNTNEPAKQLLTQGMVLADAF 572 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,844,862 Number of Sequences: 219361 Number of extensions: 397315 Number of successful extensions: 762 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 757 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 760 length of database: 80,573,946 effective HSP length: 53 effective length of database: 68,947,813 effective search space used: 1654747512 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)