Clone Name | rbaak4j20 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ALG1_YEAST (P16661) Chitobiosyldiphosphodolichol beta-mannosyltr... | 31 | 2.6 | 2 | TINAG_HUMAN (Q9UJW2) Tubulointerstitial nephritis antigen (TIN-Ag) | 30 | 5.7 | 3 | MATK_CYCPA (Q9MV47) Maturase K (Intron maturase) | 29 | 7.5 | 4 | HIS8_THETN (Q8R5Q4) Histidinol-phosphate aminotransferase (EC 2.... | 29 | 9.7 |
---|
>ALG1_YEAST (P16661) Chitobiosyldiphosphodolichol beta-mannosyltransferase (EC| 2.4.1.142) (GDP-mannose-dolichol diphosphochitobiose mannosyltransferase) (GDP-Man:GlcNAc2-PP-dolichol mannosyltransferase) (Beta-1,4-mannosyltransferase) (Asparagine-linked gl Length = 449 Score = 30.8 bits (68), Expect = 2.6 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Frame = +1 Query: 43 TGMDVLLAFVSFSGSLLPRRMVYCFLHPLYLEST*LLSIFS-YEIYGLSIHAAFSCFLLS 219 TG +++ + + + S+L + F HPL L S + IFS + Y L++ A +L+ Sbjct: 153 TGCKLIIDWHNLAYSILQLKFKGNFYHPLVLISYMVEMIFSKFADYNLTVTEAMRKYLIQ 212 Query: 220 QTNLVPKR 243 +L PKR Sbjct: 213 SFHLNPKR 220
>TINAG_HUMAN (Q9UJW2) Tubulointerstitial nephritis antigen (TIN-Ag)| Length = 476 Score = 29.6 bits (65), Expect = 5.7 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +3 Query: 423 SLVASKLRLPYFGRGTANLSPPRLVQQLPSQRPACSSSN 539 S+ A ++ + GR TANLSP L+ R C+S + Sbjct: 250 SVAADRIAIQSKGRYTANLSPQNLISCCAKNRHGCNSGS 288
>MATK_CYCPA (Q9MV47) Maturase K (Intron maturase)| Length = 519 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = -3 Query: 487 GGERFAVPRPK*G---SLSFDATREKRARLFHTQWFKRAKYC 371 G E F PK SLSF TR +R R++H+ +R +C Sbjct: 461 GSELFTKSSPKERELISLSFSKTRSQRERIWHSDILQRNPFC 502
>HIS8_THETN (Q8R5Q4) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 351 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 204 LFSVVSDEPGAQEAVINVNEDNAVNVE 284 ++S+ S GA E +N+NED NVE Sbjct: 112 MYSIYSKIAGANEIAVNLNEDYTYNVE 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,610,461 Number of Sequences: 219361 Number of extensions: 1343159 Number of successful extensions: 2798 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2738 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2798 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)