Clone Information

BLAST Search Result

Clone Name	rbaak4j17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing pro...	210	3e-69
2	ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protei...	169	3e-46
3	ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing prot...	164	2e-40
4	ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing prot...	162	1e-39
5	ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing pro...	141	1e-33
6	ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing pro...	133	4e-32
7	ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing pro...	120	4e-27
8	ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-conta...	116	5e-26
9	ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing pro...	114	2e-25
10	ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing pro...	109	6e-24
11	ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing pro...	108	1e-23
12	ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing pro...	100	5e-21
13	ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing prot...	87	4e-17
14	MKRN2_MOUSE (Q9ERV1) Makorin-2	42	0.002
15	MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)	41	0.004
16	MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62)	41	0.004
17	MKRN2_BRARE (Q9DFG8) Makorin-2	39	0.014
18	PRR3_PANTR (Q7YR36) Proline-rich protein 3 (MHC class I region p...	38	0.023
19	PRR3_HUMAN (P79522) Proline-rich protein 3 (MHC class I region p...	38	0.023
20	LEE1_YEAST (Q02799) Zinc finger protein LEE1	38	0.030
21	ZFS1_SCHPO (P47979) Zinc-finger protein zfs1	37	0.040
22	PRR3_PIG (Q767L1) Proline-rich protein 3 (MHC class I region pro...	37	0.068
23	CPSF4_HUMAN (O95639) Cleavage and polyadenylation specificity fa...	35	0.15
24	PRR3_RAT (Q6MG07) Proline-rich protein 3 (MHC class I region pro...	35	0.20
25	PRR3_MOUSE (Q811B5) Proline-rich protein 3 (MHC class I region p...	35	0.20
26	TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 3...	35	0.26
27	DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (...	34	0.34
28	TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 3...	34	0.44
29	MKRN1_MOUSE (Q9QXP6) Makorin-1	34	0.44
30	TIS1_DROME (P47980) Protein TIS11 (dTIS11)	34	0.44
31	TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 3...	33	0.57
32	TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) ...	33	0.57
33	TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)	33	0.57
34	PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regu...	33	0.75
35	PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regu...	33	0.75
36	PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regu...	33	0.75
37	PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regu...	33	0.75
38	PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regula...	33	0.75
39	ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing pro...	33	0.75
40	MEX6_CAEEL (Q09436) Zinc finger protein mex-6	33	0.75
41	PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regu...	33	0.98
42	U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliar...	33	0.98
43	DHX57_HUMAN (Q6P158) Putative ATP-dependent RNA helicase DHX57 (...	33	0.98
44	CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24	33	0.98
45	MKRN1_MACEU (Q9TT91) Makorin-1	33	0.98
46	TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36)...	33	0.98
47	TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 3...	33	0.98
48	TISB_RAT (P17431) Butyrate response factor 1 (TIS11B protein) (E...	33	0.98
49	TISB_MOUSE (P23950) Butyrate response factor 1 (TIS11B protein)	33	0.98
50	TISB_HUMAN (Q07352) Butyrate response factor 1 (TIS11B protein) ...	33	0.98
51	PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regula...	33	0.98
52	ZC3H5_MOUSE (Q8BL48) Zinc finger CCCH-type domain-containing pro...	32	1.3
53	ZC3H5_HUMAN (Q9C0B0) Zinc finger CCCH-type domain-containing pro...	32	1.3
54	ZC3H8_HUMAN (Q8N5P1) Zinc finger CCCH-type domain-containing pro...	32	1.3
55	MEX5_CAEEL (Q9XUB2) Zinc finger protein mex-5	32	1.7
56	CPSF4_MOUSE (Q8BQZ5) Cleavage and polyadenylation specificity fa...	32	1.7
57	TY3H_SCHMA (O17446) Tyrosine 3-monooxygenase (EC 1.14.16.2) (Tyr...	32	1.7
58	CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing pro...	32	2.2
59	SCP3_SCHPO (P41000) Protein scp3	32	2.2
60	CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24	32	2.2
61	CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing pro...	32	2.2
62	ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing pro...	31	2.8
63	YTH1_YEAST (Q06102) Protein YTH1	31	2.8
64	MKRN3_HUMAN (Q13064) Makorin-3 (Zinc finger protein 127) (RING f...	31	2.8
65	MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61)	31	2.8
66	RN113_CAEEL (O17917) Putative RING finger protein 113 homolog	31	2.8
67	ZC3H5_CANFA (Q6EE22) Zinc finger CCCH-type domain-containing pro...	31	3.7
68	MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF...	31	3.7
69	U2AFM_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliar...	31	3.7
70	U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliar...	31	3.7
71	U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliar...	31	3.7
72	ZN183_BOVIN (Q67ER4) Zinc finger protein 183	30	4.9
73	R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger prote...	30	4.9
74	GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC...	30	4.9
75	GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5....	30	4.9
76	R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger prote...	30	4.9
77	CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24	30	4.9
78	RDRP_PVX (P09395) RNA replication protein (165 kDa protein) (ORF...	30	6.3
79	YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III	30	6.3
80	CTH2_YEAST (P47977) Zinc finger protein CTH2 (YTIS11 protein)	30	6.3
81	MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [C...	30	8.3
82	CWC2_LEPMC (Q6T412) Pre-mRNA-splicing factor CWC2	30	8.3
83	CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24	30	8.3
84	CTH1_YEAST (P47976) Zinc finger protein CTH1	30	8.3
85	DPOL_RCMVM (Q85428) DNA polymerase (EC 2.7.7.7)	30	8.3

>ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 439

 Score =  210 bits (535), Expect(2) = 3e-69
 Identities = 97/114 (85%), Positives = 102/114 (89%), Gaps = 1/114 (0%)
 Frame = -3

Query: 531 KYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRP 352
           +YALQRENVFPERPDQPEC YY+KTGDCKFGAVCKFHHPRVRS P PDC+LSP+GLPLRP
Sbjct: 320 QYALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRP 379

Query: 351 GEELCKFYSRYGICKFGVNCKFDHP-MAAPMGVYAYGYSASASPNAPMARRLLE 193
           GEELCKFYSRYGICKFG NCKFDHP MA PMGVYAYG   SAS N PM RRLL+
Sbjct: 380 GEELCKFYSRYGICKFGANCKFDHPTMAPPMGVYAYG---SASTNVPMVRRLLQ 430



 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 56/124 (45%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
 Frame = -3

Query: 567 NHPTDPVHFLYLKYALQR-ENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 391
           NHP D      L  A  R +  +PER  QPEC YY+KTG CKFG  CKFHHPR ++    
Sbjct: 104 NHPQDR----NLAIASARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAG 159

Query: 390 DCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP-----MAAPMGVYAY---GYSA 235
              L+ +G PLRP E+ C +Y + G CK+G  CKF HP     MA+  G   Y     SA
Sbjct: 160 RVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSA 219

Query: 234 SASP 223
           +A P
Sbjct: 220 TAGP 223



 Score = 76.3 bits (186), Expect = 8e-14
 Identities = 32/76 (42%), Positives = 47/76 (61%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 325
           +PER  +P+C YY++TG C+FG  C+F+HP+ R+       +     P R G+  C++Y 
Sbjct: 77  YPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKG-EYPERMGQPECQYYL 135

Query: 324 RYGICKFGVNCKFDHP 277
           + G CKFG  CKF HP
Sbjct: 136 KTGTCKFGPTCKFHHP 151



 Score = 71.6 bits (174), Expect(2) = 3e-69
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -2

Query: 652 ESRLQSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQ 530
           ESRLQSPGAQQ YGTS+Q + SAGNQGM SPYRSSS+PVPQ
Sbjct: 280 ESRLQSPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQ 320



 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = -3

Query: 381 LSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 277
           + P   P R GE  C +Y R G+C+FG++C+F+HP
Sbjct: 72  MQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHP 106

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>ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protein ZFN-like|
          Length = 417

 Score =  169 bits (427), Expect(2) = 3e-46
 Identities = 78/111 (70%), Positives = 89/111 (80%)
 Frame = -3

Query: 528 YALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPG 349
           YALQR+N+FPERPDQPEC +Y+KTGDCKFGAVC+FHHPR R  P PDC+LSP+GLPLRPG
Sbjct: 267 YALQRDNIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLSPIGLPLRPG 326

Query: 348 EELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAPMARRLL 196
           E LC FYSRYGICKFG +CKFDH    PMG++ Y   AS   + P  RRLL
Sbjct: 327 EPLCVFYSRYGICKFGPSCKFDH----PMGIFTYNV-ASPLADTP-GRRLL 371



 Score = 99.0 bits (245), Expect = 1e-20
 Identities = 54/121 (44%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
 Frame = -3

Query: 567 NHPTDPVHFLYLKYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPD 388
           NHP  P   L +  A + +  FPER  QPEC YY+KTG CKFGA C+FHHP+ ++     
Sbjct: 54  NHP--PNRKLAIATA-RMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGR 110

Query: 387 CILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYG---YSASASPNA 217
             L+ +G PLRP E    +Y R G CKFG  CKF HP  + M +   G   Y    SP  
Sbjct: 111 VALNILGYPLRPNESERAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTT 170

Query: 216 P 214
           P
Sbjct: 171 P 171



 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 33/76 (43%), Positives = 46/76 (60%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 325
           +PE P +P+C YYI+TG C+FGA C+F+HP  R        +     P R G+  C++Y 
Sbjct: 27  YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKG-EFPERLGQPECQYYL 85

Query: 324 RYGICKFGVNCKFDHP 277
           + G CKFG  C+F HP
Sbjct: 86  KTGTCKFGATCRFHHP 101



 Score = 36.2 bits (82), Expect(2) = 3e-46
 Identities = 22/40 (55%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -2

Query: 652 ESRLQSPGAQQYYGTSRQGE-GSAGNQGMQSPYRSSSFPV 536
           ES  Q+    Q YGTS QGE  +AG QG  S YRS S PV
Sbjct: 225 ESPQQTMRNDQTYGTSHQGELENAGLQGAYSQYRSGSVPV 264

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>ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing protein ZFN3|
          Length = 375

 Score =  164 bits (415), Expect = 2e-40
 Identities = 75/107 (70%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
 Frame = -3

Query: 528 YALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPG 349
           YAL RENVFPERP QPEC +Y+KTGDCKFG VCKFHHPR R  PPPDC+LS +GLPLRPG
Sbjct: 232 YALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPG 291

Query: 348 EELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAY-GYSASASPNAPM 211
           E LC FYSRYGICKFG +CKFDHPM     V+ Y   +AS SP++ +
Sbjct: 292 EPLCVFYSRYGICKFGPSCKFDHPMR----VFTYNNNTASPSPSSSL 334



 Score = 95.9 bits (237), Expect = 9e-20
 Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = -3

Query: 567 NHPTDPVHFLYLKYALQR-ENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 391
           NHP    H   L  A  R +  +PER  QPEC +Y+KTG CKFG  CKFHHPR ++    
Sbjct: 66  NHP----HDRKLVIATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDG 121

Query: 390 DCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 277
              ++ +  PLRP E+ C ++ R G CKFG  CKF+HP
Sbjct: 122 SVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHP 159



 Score = 79.7 bits (195), Expect = 7e-15
 Identities = 35/76 (46%), Positives = 47/76 (61%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 325
           +PER  +P+C YYI+TG C+FG+ C+F+HP  R        +     P R G+  C+FY 
Sbjct: 39  YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG-EYPERIGQPECEFYL 97

Query: 324 RYGICKFGVNCKFDHP 277
           + G CKFGV CKF HP
Sbjct: 98  KTGTCKFGVTCKFHHP 113



 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 16/34 (47%), Positives = 26/34 (76%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRS 403
           +P RP++ +C Y+++ G CKFG  CKF+HP+ +S
Sbjct: 130 YPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQS 163

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>ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing protein ZFN1|
          Length = 397

 Score =  162 bits (409), Expect = 1e-39
 Identities = 72/99 (72%), Positives = 80/99 (80%)
 Frame = -3

Query: 528 YALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPG 349
           YAL RENVFPERP QPEC +Y+KTGDCKFG VCKFHHPR R  PPPDC+LS +GLPLRPG
Sbjct: 263 YALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPG 322

Query: 348 EELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSAS 232
           E LC FY+RYGICKFG +CKFDHPM     V+ Y  +AS
Sbjct: 323 EPLCVFYTRYGICKFGPSCKFDHPMR----VFTYDNTAS 357



 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 49/101 (48%), Positives = 59/101 (58%)
 Frame = -3

Query: 567 NHPTDPVHFLYLKYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPD 388
           NHP D    L +  A  R   +PER  QPEC YY+KTG CKFG  CKFHHPR ++     
Sbjct: 64  NHPRD--RELVIATARMRGE-YPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGR 120

Query: 387 CILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAP 265
             L+ +G PLR  E  C ++ R G CKFG  CKF+HP   P
Sbjct: 121 VSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQP 161



 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGL----PLRPGEELC 337
           +PERP +P+C YYI+TG C+FG+ C+F+HPR R     + +++   +    P R G+  C
Sbjct: 37  YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDR-----ELVIATARMRGEYPERIGQPEC 91

Query: 336 KFYSRYGICKFGVNCKFDHP 277
           ++Y + G CKFGV CKF HP
Sbjct: 92  EYYLKTGTCKFGVTCKFHHP 111

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>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 468

 Score =  141 bits (356), Expect = 1e-33
 Identities = 63/105 (60%), Positives = 75/105 (71%)
 Frame = -3

Query: 522 LQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEE 343
           +Q+E  FPERP +PEC YY+KTGDCKFG  CKFHHPR R  P  +C+LSP+GLPLRPG +
Sbjct: 280 IQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQ 339

Query: 342 LCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAPMA 208
            C FY + G CKFG  CKFDH    PMG   Y  SAS+  +AP+A
Sbjct: 340 RCTFYVQNGFCKFGSTCKFDH----PMGTIRYNPSASSLADAPVA 380



 Score = 94.0 bits (232), Expect = 4e-19
 Identities = 48/124 (38%), Positives = 65/124 (52%)
 Frame = -3

Query: 567 NHPTDPVHFLYLKYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPD 388
           NHP D      ++  ++    +PER  +P C +Y+KTG CKFGA CKFHHP+        
Sbjct: 69  NHPRDRAS---VEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSH 125

Query: 387 CILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAPMA 208
             L+  G P+R G+  C +Y + G CKFG+ CKF HP   P G       ASA    P  
Sbjct: 126 VPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQ--PAGTTVPPPPASAPQFYPSV 183

Query: 207 RRLL 196
           + L+
Sbjct: 184 QSLM 187



 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 325
           +PERP  P+C YY++TG C +G  C+++HPR R+      + +    P R GE  C+FY 
Sbjct: 42  YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEA-TVRATGQYPERFGEPPCQFYL 100

Query: 324 RYGICKFGVNCKFDHPMAA-------PMGVYAY 247
           + G CKFG +CKF HP  A       P+ +Y Y
Sbjct: 101 KTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGY 133



 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 19/40 (47%), Positives = 23/40 (57%)
 Frame = -3

Query: 396 PPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 277
           P   I      P RPGE  C++Y + G CKFG +CKF HP
Sbjct: 276 PTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHP 315

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>ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
          Length = 466

 Score =  133 bits (334), Expect(2) = 4e-32
 Identities = 56/104 (53%), Positives = 75/104 (72%)
 Frame = -3

Query: 519 QRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEEL 340
           ++E  FP RP QPEC YY+KTG CKFG+ CK+HHP+  + P  +C+LSP+GLPLRPG + 
Sbjct: 291 KQEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQP 350

Query: 339 CKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAPMA 208
           C +Y+++G CKFG  CKFDH    PMG  +Y  SAS+  + P+A
Sbjct: 351 CAYYTQHGFCKFGPTCKFDH----PMGTLSYSPSASSITDLPIA 390



 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 40/76 (52%), Positives = 49/76 (64%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 325
           +PERP QP C YY+K G CKFG+ CK+ HPR  S      +L+  G PLR GE+ C +Y 
Sbjct: 98  YPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQA--VMLNSSGYPLRSGEKDCTYYV 155

Query: 324 RYGICKFGVNCKFDHP 277
           + G CKFG  CKF HP
Sbjct: 156 KTGHCKFGSTCKFHHP 171



 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 7/82 (8%)
 Frame = -3

Query: 501 PERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMG-------LPLRPGEE 343
           PERP + +C+YY++TG C +G  C+++HPR R+      +L+  G        P RPG+ 
Sbjct: 49  PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAA---AVLNGGGKTTHSAEYPERPGQP 105

Query: 342 LCKFYSRYGICKFGVNCKFDHP 277
           +C++Y + G CKFG NCK+DHP
Sbjct: 106 VCEYYMKNGTCKFGSNCKYDHP 127



 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 18/32 (56%), Positives = 24/32 (75%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRV 409
           +P R  + +C YY+KTG CKFG+ CKFHHP +
Sbjct: 142 YPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEI 173



 Score = 42.7 bits (99), Expect = 0.001
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -3

Query: 366 LPLRPGEELCKFYSRYGICKFGVNCKFDHP 277
           LP RPGE  C +Y R G C +G NC+++HP
Sbjct: 48  LPERPGEADCVYYLRTGACGYGENCRYNHP 77



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -3

Query: 417 PRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 277
           P   S  P          P RPG+  C++Y + G CKFG  CK+ HP
Sbjct: 279 PLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSACKYHHP 325



 Score = 25.0 bits (53), Expect(2) = 4e-32
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 640 QSPGAQQYYGTSRQGEGSAGNQGMQ-SPYRSSSFP 539
           Q+  A  +YG S QG  +A   G Q +P  SS+ P
Sbjct: 252 QTVQAGPFYGLSHQGPSAAVTYGSQYAPLSSSTMP 286

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>ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 476

 Score =  120 bits (301), Expect = 4e-27
 Identities = 53/103 (51%), Positives = 71/103 (68%)
 Frame = -3

Query: 519 QRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEEL 340
           Q+E+ FPERP QP+C YY++TGDCKFGA CK+HHPR  S P    +++ + LPLRPG + 
Sbjct: 299 QQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQP 358

Query: 339 CKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAPM 211
           C +Y++ G C++GV CK+DHPM         GYS SA P + M
Sbjct: 359 CAYYAQNGYCRYGVACKYDHPMG------TLGYSPSALPLSDM 395



 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 47/103 (45%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 325
           +PER  QP C YY+KTG CKFG  CK+HHP+      P  +L+  G P+R GE+ C +Y 
Sbjct: 105 YPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLP-VMLNNSGFPIRLGEKECSYYM 163

Query: 324 RYGICKFGVNCKFDHPM--AAPM--GVYAYGYSASASPNAPMA 208
           + G CKFG  CKF HP     PM  G+Y    S S +   P A
Sbjct: 164 KTGQCKFGTTCKFHHPEFGGVPMTPGIYPPLQSPSIASPHPYA 206



 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
 Frame = -3

Query: 501 PERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPP---PDCILSPMGLPLRPGEELCKF 331
           PERP + +C+YY++TG C FG  C+++HPR R            + +  P R G+ +C++
Sbjct: 57  PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEY 116

Query: 330 YSRYGICKFGVNCKFDHP 277
           Y + G CKFG NCK+ HP
Sbjct: 117 YMKTGTCKFGTNCKYHHP 134



 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = -3

Query: 366 LPLRPGEELCKFYSRYGICKFGVNCKFDHP 277
           LP RPGEE C +Y R G C FG  C+++HP
Sbjct: 56  LPERPGEEDCVYYLRTGACGFGDRCRYNHP 85

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>ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-containing protein|
           ZFN-like 6
          Length = 448

 Score =  116 bits (291), Expect = 5e-26
 Identities = 49/80 (61%), Positives = 58/80 (72%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 325
           FPERPDQPEC YY+KTGDCKF   CK+HHP+ R    P   L+  GLPLRP + +C +YS
Sbjct: 343 FPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYS 402

Query: 324 RYGICKFGVNCKFDHPMAAP 265
           RYGICKFG  C+FDH +  P
Sbjct: 403 RYGICKFGPACRFDHSVQPP 422



 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
 Frame = -3

Query: 546 HFLYLKYALQRENVFPERPDQP------ECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDC 385
           H L  K+ + R+N   E+ D        +C YY +TG CK+G  C+F+H   +S      
Sbjct: 135 HPLARKFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAP 194

Query: 384 ILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMG 259
            L+ +GLPLRPGE  C +Y R G CK+G  CKF+HP    +G
Sbjct: 195 ELNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIG 236



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = -3

Query: 363 PLRPGEELCKFYSRYGICKFGVNCKFDHPMA 271
           P+RPG E C FY R G CKFG +CKF+HP+A
Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHPLA 138

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>ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 437

 Score =  114 bits (286), Expect = 2e-25
 Identities = 50/99 (50%), Positives = 70/99 (70%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 325
           FP+RPDQPEC Y+++TGDCKFG+ C++HHP     P    +LS +GLPLRPG   C  ++
Sbjct: 279 FPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFA 338

Query: 324 RYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAPMA 208
           ++GICKFG  CKFDH M++ +   +Y  SAS+  + P+A
Sbjct: 339 QHGICKFGPACKFDHSMSSSL---SYSPSASSLTDMPVA 374



 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
 Frame = -3

Query: 501 PERPDQPECIYYIKTGDCKFGAVCKFHHPRVR----SQPPPDCILSPMGLPLRPGEELCK 334
           PER   P C ++++TG CKFGA CK+HHPR      S  P    LS +G PLRPGE+ C 
Sbjct: 73  PERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVS--LSYLGYPLRPGEKECS 130

Query: 333 FYSRYGICKFGVNCKFDHPM 274
           +Y R G CKFG+ C+F+HP+
Sbjct: 131 YYLRTGQCKFGLTCRFNHPV 150



 Score = 86.3 bits (212), Expect = 7e-17
 Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 325
           +PERPD+P+CIYY++TG C +G+ C+F+HPR R             LP R G  +C+ + 
Sbjct: 26  YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFM 85

Query: 324 RYGICKFGVNCKFDHP-------MAAPMGVYAYGY 241
           R G CKFG +CK+ HP         AP+ +   GY
Sbjct: 86  RTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGY 120



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -3

Query: 552 PVHFLYLKYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHP-RVRSQPPP 391
           PV   YL Y        P RP + EC YY++TG CKFG  C+F+HP  +  Q PP
Sbjct: 112 PVSLSYLGY--------PLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPP 158

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>ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing protein ZFN-like 5|
          Length = 435

 Score =  109 bits (273), Expect = 6e-24
 Identities = 46/75 (61%), Positives = 53/75 (70%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 325
           FPERPDQPEC YY+KTGDCKF   CK+HHP+ R         +  GLPLRP + +C  YS
Sbjct: 331 FPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYS 390

Query: 324 RYGICKFGVNCKFDH 280
           RYGICKFG  C+FDH
Sbjct: 391 RYGICKFGPACRFDH 405



 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
 Frame = -3

Query: 498 ERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRY 319
           E P   EC YY +TG CK+G  C+F H +  + P     L+ +GLP+RPGE+ C FY R 
Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 206

Query: 318 GICKFGVNCKFDHPMAAPMG-----VYAYGYSASASPNAP 214
           G CKFG +CKF+HP    +G     +Y      S SP AP
Sbjct: 207 GSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPKAP 246



 Score = 46.2 bits (108), Expect = 9e-05
 Identities = 18/33 (54%), Positives = 23/33 (69%)
 Frame = -3

Query: 372 MGLPLRPGEELCKFYSRYGICKFGVNCKFDHPM 274
           M  P+RP  E C FY R G CK+G +CKF+HP+
Sbjct: 96  MVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPV 128



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = -3

Query: 501 PERPDQPECIYYIKTGDCKFGAVCKFHHP 415
           P RP + EC +Y++ G CKFG+ CKF+HP
Sbjct: 192 PIRPGEKECPFYMRNGSCKFGSDCKFNHP 220



 Score = 36.2 bits (82), Expect = 0.088
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -3

Query: 363 PLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAP 214
           P RP +  C +Y + G CKF   CK+ HP        A+ ++    P  P
Sbjct: 332 PERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRP 381

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>ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
          Length = 465

 Score =  108 bits (271), Expect = 1e-23
 Identities = 49/103 (47%), Positives = 69/103 (66%)
 Frame = -3

Query: 516 RENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELC 337
           +E  FP+RP+QPEC Y+++TGDCKFG  C+FHHP + +  P    LS +GLPLRPG   C
Sbjct: 293 KEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHP-MEAASPEASTLSHIGLPLRPGAVPC 351

Query: 336 KFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAPMA 208
             ++++GICKFG  CKFDH + +     +Y  S S+  + P+A
Sbjct: 352 THFAQHGICKFGPACKFDHSLGS--SSLSYSPSPSSLTDMPVA 392



 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRV--RSQPPPDCILSPMGLPLRPGEELCKF 331
           FPER  QP C ++++TG CKFGA CK+HHPR            L+ MG PLRPGE+ C +
Sbjct: 94  FPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSY 153

Query: 330 YSRYGICKFGVNCKFDHPMAAPMGVYA 250
           + R G CKFG  C++ HP+  P GV A
Sbjct: 154 FMRTGQCKFGSTCRYHHPV--PPGVQA 178



 Score = 86.7 bits (213), Expect = 6e-17
 Identities = 35/76 (46%), Positives = 50/76 (65%)
 Frame = -3

Query: 504 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 325
           FPERPD+P+CIYY++TG C +G+ C+F+HPR R+             P R G+ +C+ + 
Sbjct: 48  FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFM 107

Query: 324 RYGICKFGVNCKFDHP 277
           R G CKFG +CK+ HP
Sbjct: 108 RTGTCKFGASCKYHHP 123

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>ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing protein ZFN-like 4|
          Length = 404

 Score =  100 bits (248), Expect = 5e-21
 Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
 Frame = -3

Query: 567 NHPTD-PVHFLYLKYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 391
           NHPT  P    Y K  L      PER  QP+C Y++KTG CK+G  CK+HHP+ R+   P
Sbjct: 71  NHPTHLPQDVAYYKEEL------PERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQP 124

Query: 390 DCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAPM 211
             + + +GLP+R GE+ C +Y R G C+FGV CKF HP   P   ++  Y  S+ P A +
Sbjct: 125 -VMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQ--PDNGHSTAYGMSSFPAADL 181



 Score = 99.0 bits (245), Expect = 1e-20
 Identities = 40/75 (53%), Positives = 50/75 (66%)
 Frame = -3

Query: 498 ERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRY 319
           E  DQPEC +++ TG CK+G  CK+ HP VR   PP  +++P  LP RPG+  C  +  Y
Sbjct: 260 ESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSY 319

Query: 318 GICKFGVNCKFDHPM 274
           G CKFG NCKFDHPM
Sbjct: 320 GFCKFGPNCKFDHPM 334



 Score = 46.2 bits (108), Expect = 9e-05
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -3

Query: 363 PLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAY 247
           P RPGE  C+FY R G+C +G +C+++HP   P  V  Y
Sbjct: 45  PDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYY 83



 Score = 40.0 bits (92), Expect = 0.006
 Identities = 17/31 (54%), Positives = 18/31 (58%)
 Frame = -3

Query: 507 VFPERPDQPECIYYIKTGDCKFGAVCKFHHP 415
           V P RP QP C  +   G CKFG  CKF HP
Sbjct: 303 VLPARPGQPACGNFRSYGFCKFGPNCKFDHP 333



 Score = 33.9 bits (76), Expect = 0.44
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 369 GLPLRPGEELCKFYSRYGICKFGVNCKFDHP 277
           GL     +  C+F+   G CK+G +CK+ HP
Sbjct: 257 GLSESSDQPECRFFMNTGTCKYGDDCKYSHP 287

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>ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing protein ZFN2|
          Length = 453

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
 Frame = -3

Query: 567 NHPTD--PVHFLYLKYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPP 394
           NHP    P   +Y +  L      PER  QP+C    +TG CK+G  CK+HHP+ R+   
Sbjct: 68  NHPLTNLPQGIIYYRDQL------PERVGQPDC----ETGACKYGPTCKYHHPKDRNGAG 117

Query: 393 PDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAP 214
           P  + + +GLP+R GE+ C +Y + G+C+FGV CKF HP   P    + G+SA A  + P
Sbjct: 118 P-VLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHP--HPHSQPSNGHSAYAMSSFP 174



 Score = 86.3 bits (212), Expect = 7e-17
 Identities = 34/72 (47%), Positives = 47/72 (65%)
 Frame = -3

Query: 489 DQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGIC 310
           ++ EC +++ TG CK+G  CK+ HP+ R    P  +L+P+ LP RPG+  C  +  YG C
Sbjct: 263 ERAECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFC 322

Query: 309 KFGVNCKFDHPM 274
           KFG NCKFDH M
Sbjct: 323 KFGANCKFDHSM 334



 Score = 39.3 bits (90), Expect = 0.010
 Identities = 20/52 (38%), Positives = 23/52 (44%)
 Frame = -3

Query: 573 ECNHPTDPVHFLYLKYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHH 418
           +C +       L     L    V P RP QP C  +   G CKFGA CKF H
Sbjct: 281 DCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDH 332

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>MKRN2_MOUSE (Q9ERV1) Makorin-2|
          Length = 416

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = -3

Query: 486 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 307
           Q  C Y++  G C+ G+ C F H    S+P                  +CK+Y + G C 
Sbjct: 5   QVTCRYFMH-GVCREGSQCLFSHDLANSKP----------------STICKYYQK-GYCA 46

Query: 306 FGVNCKFDH--PMAAPMGVYAYGYSASASPNA 217
           +G  C++DH  P AA  G  A G + + SP++
Sbjct: 47  YGARCRYDHTKPPAAAGG--AVGPAPNPSPSS 76

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>MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)|
          Length = 423

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 22/69 (31%), Positives = 32/69 (46%)
 Frame = -3

Query: 486 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 307
           Q  C Y++  G C+ G+ C F H    S+P                  +CKFY R G+C 
Sbjct: 5   QVTCRYFLH-GVCREGSRCLFSHDLNNSKP----------------STICKFYQR-GVCA 46

Query: 306 FGVNCKFDH 280
           +G  C++DH
Sbjct: 47  YGERCRYDH 55

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>MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62)|
          Length = 416

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 24/89 (26%), Positives = 38/89 (42%)
 Frame = -3

Query: 486 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 307
           Q  C Y++  G C+ G+ C F H    S+P                  +CK+Y + G C 
Sbjct: 5   QITCRYFMH-GVCREGSQCLFSHDLANSKP----------------STICKYYQK-GYCA 46

Query: 306 FGVNCKFDHPMAAPMGVYAYGYSASASPN 220
           +G  C++DH   +     A G  A + P+
Sbjct: 47  YGTRCRYDHTRPSAAAGGAVGTMAHSVPS 75

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>MKRN2_BRARE (Q9DFG8) Makorin-2|
          Length = 414

 Score = 38.9 bits (89), Expect = 0.014
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
 Frame = -3

Query: 486 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 307
           Q  C Y++  G C+ G+ C F H    S+P                  +CK+Y R G C 
Sbjct: 5   QVTCRYFLH-GVCREGSRCLFSHDLTTSKP----------------STICKYYQR-GACA 46

Query: 306 FGVNCKFDH--PMAAPMGV---YAYGYSASASPNAP 214
           +G  C++DH  P     G    ++   S+SA  +AP
Sbjct: 47  YGDRCRYDHIKPPGRGSGAPADHSNRSSSSAGASAP 82

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>PRR3_PANTR (Q7YR36) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 188

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 507 VFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 397
           V  ++ D+P C ++ K G C++  +C F+HP V   P
Sbjct: 151 VMEDKSDRPVCRHFAKKGHCRYEDLCAFYHPGVNGPP 187

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>PRR3_HUMAN (P79522) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 188

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 507 VFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 397
           V  ++ D+P C ++ K G C++  +C F+HP V   P
Sbjct: 151 VMEDKSDRPVCRHFAKKGHCRYEDLCAFYHPGVNGPP 187

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>LEE1_YEAST (Q02799) Zinc finger protein LEE1|
          Length = 301

 Score = 37.7 bits (86), Expect = 0.030
 Identities = 27/89 (30%), Positives = 39/89 (43%)
 Frame = -3

Query: 546 HFLYLKYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMG 367
           H L  K   Q++  +   P +     + K G+C+ G+ C F H        PD I S   
Sbjct: 74  HLLITKNNSQQQKDYSHVPCK-----FFKMGNCQAGSSCPFSH-------SPDIISSANN 121

Query: 366 LPLRPGEELCKFYSRYGICKFGVNCKFDH 280
           LP       CK++++ G CKFG  C   H
Sbjct: 122 LP-------CKYFAK-GNCKFGNKCVNAH 142

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>ZFS1_SCHPO (P47979) Zinc-finger protein zfs1|
          Length = 404

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -3

Query: 459 TGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDH 280
           +G C++G+ C+F H     + PP           +   E C+ +  YG C +G+ C F H
Sbjct: 338 SGTCRYGSKCQFAHGNQELKEPPR--------HPKYKSERCRSFMMYGYCPYGLRCCFLH 389

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>PRR3_PIG (Q767L1) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56) (Fragment)
          Length = 131

 Score = 36.6 bits (83), Expect = 0.068
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -3

Query: 507 VFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 397
           V  ++ D+P C ++ K G C++  +C F+HP     P
Sbjct: 94  VMEDKSDRPVCRHFAKKGHCRYEDLCAFYHPGANGPP 130

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>CPSF4_HUMAN (O95639) Cleavage and polyadenylation specificity factor, 30 kDa|
           subunit (CPSF 30 kDa subunit) (NS1 effector
           domain-binding protein 1) (Neb-1) (No arches homolog)
          Length = 269

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
 Frame = -3

Query: 483 PECIYYIKTGDCKFGAVCKFHH----PRVRSQPPPD---CILSPMGLPLRPGEELCKFYS 325
           PEC +Y K G+C     C F H     +++  P  D   C   P+         +C  Y 
Sbjct: 94  PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYL 152

Query: 324 RYGICKFGVNCKFDHP-MAAPMG 259
             G C  G +CKF HP    PMG
Sbjct: 153 -VGFCPEGPSCKFMHPRFELPMG 174

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>PRR3_RAT (Q6MG07) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 186

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 498 ERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 397
           ++ D+P C ++ K G C++   C F+HP V   P
Sbjct: 152 DKSDRPVCRHFSKKGHCRYEDHCAFYHPGVNGPP 185

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>PRR3_MOUSE (Q811B5) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 190

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 498 ERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 397
           ++ D+P C ++ K G C++   C F+HP V   P
Sbjct: 156 DKSDRPVCRHFSKKGHCRYEDHCAFYHPGVNGPP 189



 Score = 30.0 bits (66), Expect = 6.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 399 PPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 277
           PP D   SP  +  +    +C+ +S+ G C++  +C F HP
Sbjct: 146 PPKD---SPQMMEDKSDRPVCRHFSKKGHCRYEDHCAFYHP 183

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>TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36)
          Length = 325

 Score = 34.7 bits (78), Expect = 0.26
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGE---ELCKFYSRYGICK 307
           C  + ++G C++GA C+F H            L  +  P R  +   ELC  +   G C 
Sbjct: 107 CRTFSESGRCRYGAKCQFAHG-----------LGELRQPSRHPKYKTELCHKFYLQGRCP 155

Query: 306 FGVNCKFDH----PMAAPMGVYAYGYSASASPNAPMARR 202
           +G  C F H     +AAP   +    S S S   P  RR
Sbjct: 156 YGSRCHFIHNPSEDLAAPGHPHVLRQSISFS-GLPSGRR 193



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = -3

Query: 417 PRVRSQPPPDCILSPMGLPL---RPGEELCKFYSRYGICKFGVNCKFDH 280
           PR  S+  P    SP   P    R   ELC+ +S  G C++G  C+F H
Sbjct: 79  PRPSSELSPSPT-SPTATPTTSSRYKTELCRTFSESGRCRYGAKCQFAH 126

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>DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)|
           (DEAH box protein 57)
          Length = 1388

 Score = 34.3 bits (77), Expect = 0.34
 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -3

Query: 519 QRENVFPERPDQPE-CIYYIKTGDCKFGAVCKFHH 418
           Q+E+    R   PE C +Y+K G+CKFG+ CKF H
Sbjct: 290 QKESSKNVRDTSPETCKFYLK-GNCKFGSKCKFKH 323



 Score = 32.7 bits (73), Expect = 0.98
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDH 280
           E CKFY + G CKFG  CKF H
Sbjct: 303 ETCKFYLK-GNCKFGSKCKFKH 323

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>TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36) (TIS11A protein) (TIS11)
          Length = 324

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHP----RVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGIC 310
           C  + ++G C++GA C+F H     R  S+ P            +   ELC  +   G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAHGLGELRQASRHP------------KYKTELCHKFYLQGRC 154

Query: 309 KFGVNCKFDH----PMAAPMGVYAYGYSASASPNAPMARR 202
            +G  C F H     +AAP   +    S S S   P  RR
Sbjct: 155 PYGSRCHFIHNPSEDLAAPGHPHVLRQSISFS-GLPSGRR 193



 Score = 30.8 bits (68), Expect = 3.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDH 280
           ELC+ +S  G C++G  C+F H
Sbjct: 105 ELCRTFSESGRCRYGAKCQFAH 126

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>MKRN1_MOUSE (Q9QXP6) Makorin-1|
          Length = 481

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = -3

Query: 486 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 307
           Q  C Y++  G CK G  C++ H         D   SP G+       +CK++ R G C 
Sbjct: 58  QVTCRYFMH-GVCKEGDNCRYSH---------DLSDSPYGV-------VCKYFQR-GYCV 99

Query: 306 FGVNCKFDH 280
           +G  C+++H
Sbjct: 100 YGDRCRYEH 108

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>TIS1_DROME (P47980) Protein TIS11 (dTIS11)|
          Length = 436

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
 Frame = -3

Query: 558 TDPVHFLYLKYALQRENVFPERPDQPE---------CIYYIKTGDCKFGAVCKFHHPRVR 406
           T+ +  + L   L+R    P  P QP          C  + + G+CK+G  C+F H    
Sbjct: 105 TENLGNMNLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHE 164

Query: 405 SQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDH 280
                   L  +    +   E C+ +   G C +G  C F H
Sbjct: 165 --------LRNVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 198

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>TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36) (TIS11A protein) (TIS11) (Growth
           factor-inducible nuclear protein NUP475) (G0/G1 switch
           regulatory protein 24)
          Length = 326

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 399 PPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDH 280
           P P    +    P R   ELC+ +S  G C++G  C+F H
Sbjct: 89  PSPTSPTATSTTPSRYKTELCRTFSESGRCRYGAKCQFAH 128



 Score = 32.7 bits (73), Expect = 0.98
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
 Frame = -3

Query: 501 PERPDQPECIYYIKTGDCKFGAVCKFHHP----RVRSQPPPDCILSPMGLPLRPGEELCK 334
           P R     C  + ++G C++GA C+F H     R  ++ P            +   ELC 
Sbjct: 101 PSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQANRHP------------KYKTELCH 148

Query: 333 FYSRYGICKFGVNCKFDH----PMAAP 265
            +   G C +G  C F H     +AAP
Sbjct: 149 KFYLQGRCPYGSRCHFIHNPSEDLAAP 175

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>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response|
           factor 2) (ERF-2)
          Length = 492

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKF----HHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGIC 310
           C  + ++G CK+G  C+F    H  R  ++ P            +   ELC+ +   G C
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRSLTRHP------------KYKTELCRTFHTIGFC 206

Query: 309 KFGVNCKFDH 280
            +G  C F H
Sbjct: 207 PYGPRCHFIH 216



 Score = 29.6 bits (65), Expect = 8.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDH 280
           ELC+ +   G CK+G  C+F H
Sbjct: 157 ELCRPFEESGTCKYGEKCQFAH 178

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>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)|
          Length = 367

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKF----HHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGIC 310
           C  + ++G CK+G  C+F    H  R  ++ P            +   ELC+ +   G C
Sbjct: 132 CRPFEESGTCKYGEKCQFAHGFHELRSLTRHP------------KYKTELCRTFHTIGFC 179

Query: 309 KFGVNCKFDH 280
            +G  C F H
Sbjct: 180 PYGPRCHFIH 189



 Score = 29.6 bits (65), Expect = 8.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDH 280
           ELC+ +   G CK+G  C+F H
Sbjct: 130 ELCRPFEESGTCKYGEKCQFAH 151

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>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53) (Protein
            FB19)
          Length = 940

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 489  DQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 391
            ++P C +++  G+C++   C F+HP V   P P
Sbjct: 908  NRPVCRHFMMKGNCRYENNCAFYHPGVNGPPLP 940

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>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53)
          Length = 940

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 489  DQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 391
            ++P C +++  G+C++   C F+HP V   P P
Sbjct: 908  NRPVCRHFMMKGNCRYENNCAFYHPGVNGPPLP 940

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>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (Phosphatase 1 nuclear targeting subunit) (MHC class I
            region proline-rich protein CAT53) (FB19 protein)
            (PP1-binding protein of 114 kDa) (p99)
          Length = 940

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 489  DQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 391
            ++P C +++  G+C++   C F+HP V   P P
Sbjct: 908  NRPVCRHFMMKGNCRYENNCAFYHPGVNGPPLP 940

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>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 888

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 489 DQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 391
           ++P C +++  G+C++   C F+HP V   P P
Sbjct: 856 NRPVCRHFMMKGNCRYENNCAFYHPGVNGPPLP 888

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>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (PNUTS
           protein) (MHC class I region proline-rich protein CAT53)
          Length = 872

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 489 DQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 391
           ++P C +++  G+C++   C F+HP V   P P
Sbjct: 840 NRPVCRHFMMKGNCRYENNCAFYHPGVNGPPLP 872

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>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1189

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRP-------GEELCKFYSRY 319
           C Y+++ G C  G  CKF H     +    C     G   +         E  CKFY   
Sbjct: 278 CKYFLE-GRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSG 336

Query: 318 GICKFGVNCKFDH 280
             C  G NCKF H
Sbjct: 337 AKCYQGDNCKFSH 349

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>MEX6_CAEEL (Q09436) Zinc finger protein mex-6|
          Length = 467

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
 Frame = -3

Query: 450 CKFGAVCKFHHPRVRSQPPPDCILSPMGLPLR-PGEE----LCKFYSR--YGICKFGVNC 292
           C  GA CKF H            L    +P R P  +    LCK ++R   G+C +G+ C
Sbjct: 289 CALGARCKFAHGLKE--------LRASDIPTRYPNNKYKTKLCKNFARGGSGVCPYGLRC 340

Query: 291 KFDHP 277
           +F HP
Sbjct: 341 EFVHP 345

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>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10
          Length = 819

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 486 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 391
           +P C +++  G+C++   C F+HP +   P P
Sbjct: 788 RPTCRHFMMKGNCRYENNCAFYHPGINGPPLP 819

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>U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit-related protein 1 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 1) (SP2)
          Length = 428

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -3

Query: 414 RVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNC--KFDHPMAAP 265
           R+   P P     P  L L      C FY++ G C+FG  C  K D P ++P
Sbjct: 143 RIWQNPEP-----PKDLRLEKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSP 189



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 486 QPECIYYIKTGDCKFGAVCKFHHPRVRSQP 397
           +P C +Y KTG C+FG  C   H    S P
Sbjct: 160 RPSCPFYNKTGACRFGNRCSRKHDFPTSSP 189

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>DHX57_HUMAN (Q6P158) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)|
           (DEAH box protein 57)
          Length = 1386

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDH 280
           E+CKFY + G CKFG  C+F H
Sbjct: 303 EICKFYLK-GNCKFGSKCRFKH 323



 Score = 30.8 bits (68), Expect = 3.7
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCIL 379
           C +Y+K G+CKFG+ C+F H     + PP+ I+
Sbjct: 305 CKFYLK-GNCKFGSKCRFKH-----EVPPNQIV 331

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>CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24|
          Length = 405

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGY 241
           ++CK Y + G C FG NCKF H        YA+G+
Sbjct: 225 DVCKDYKQTGFCGFGDNCKFLHARED----YAHGW 255

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>MKRN1_MACEU (Q9TT91) Makorin-1|
          Length = 478

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = -3

Query: 486 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 307
           Q  C Y++  G CK G  C++ H    SQ                   +C++Y R G C 
Sbjct: 54  QVTCRYFMH-GVCKKGNNCRYSHDLSTSQ----------------SAMVCRYYQR-GCCA 95

Query: 306 FGVNCKFDH 280
           +G  C+++H
Sbjct: 96  YGDRCRYEH 104

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>TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11)
          Length = 320

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGV 298
           C  Y ++G C++GA C+F H       P +  L       +   ELC  +   G C +G 
Sbjct: 102 CRTYSESGRCRYGAKCQFAH------GPGE--LRQANRHPKYKTELCHKFYLQGRCPYGS 153

Query: 297 NCKFDH 280
            C F H
Sbjct: 154 RCHFIH 159



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDH 280
           ELC+ YS  G C++G  C+F H
Sbjct: 100 ELCRTYSESGRCRYGAKCQFAH 121

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>TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11) (Growth factor-inducible
           nuclear protein NUP475) (TPA-induced sequence 11)
          Length = 319

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHP----RVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGIC 310
           C  Y ++G C++GA C+F H     R  ++ P            +   ELC  +   G C
Sbjct: 101 CRTYSESGRCRYGAKCQFAHGLGELRQANRHP------------KYKTELCHKFYLQGRC 148

Query: 309 KFGVNCKFDH 280
            +G  C F H
Sbjct: 149 PYGSRCHFIH 158



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDH 280
           ELC+ YS  G C++G  C+F H
Sbjct: 99  ELCRTYSESGRCRYGAKCQFAH 120

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>TISB_RAT (P17431) Butyrate response factor 1 (TIS11B protein) (EGF-inducible|
           protein CMG1)
          Length = 338

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPG--EELCKFYSRYGICKF 304
           C  + + G CK+G  C+F H           I     L   P    ELC+ +   G C +
Sbjct: 120 CRPFEENGACKYGDKCQFAHG----------IHELRSLTRHPKYKTELCRTFHTIGFCPY 169

Query: 303 GVNCKFDH 280
           G  C F H
Sbjct: 170 GPRCHFIH 177

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>TISB_MOUSE (P23950) Butyrate response factor 1 (TIS11B protein)|
          Length = 338

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPG--EELCKFYSRYGICKF 304
           C  + + G CK+G  C+F H           I     L   P    ELC+ +   G C +
Sbjct: 120 CRPFEENGACKYGDKCQFAHG----------IHELRSLTRHPKYKTELCRTFHTIGFCPY 169

Query: 303 GVNCKFDH 280
           G  C F H
Sbjct: 170 GPRCHFIH 177

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>TISB_HUMAN (Q07352) Butyrate response factor 1 (TIS11B protein) (EGF-response|
           factor 1) (ERF-1)
          Length = 338

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPG--EELCKFYSRYGICKF 304
           C  + + G CK+G  C+F H           I     L   P    ELC+ +   G C +
Sbjct: 120 CRPFEENGACKYGDKCQFAHG----------IHELRSLTRHPKYKTELCRTFHTIGFCPY 169

Query: 303 GVNCKFDH 280
           G  C F H
Sbjct: 170 GPRCHFIH 177

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>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 925

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 486 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 391
           +P C +++  G+C++   C F+HP V   P P
Sbjct: 894 RPVCRHFMMKGNCRYENNCAFYHPGVNGPPLP 925

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>ZC3H5_MOUSE (Q8BL48) Zinc finger CCCH-type domain-containing protein 5|
          Length = 810

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 22/81 (27%), Positives = 29/81 (35%)
 Frame = -3

Query: 456 GDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 277
           G C+ G  C++ H R   Q  P+   S            C    + G C  G  C F H 
Sbjct: 270 GKCENGDACQYCHTRTEQQFHPEIYKSTK----------CNDMQQAGSCPRGPFCAFAHI 319

Query: 276 MAAPMGVYAYGYSASASPNAP 214
              P+       SA +SP  P
Sbjct: 320 EPPPLSDDVQPSSAVSSPTQP 340

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>ZC3H5_HUMAN (Q9C0B0) Zinc finger CCCH-type domain-containing protein 5|
          Length = 810

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 22/81 (27%), Positives = 29/81 (35%)
 Frame = -3

Query: 456 GDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 277
           G C+ G  C++ H R   Q  P+   S            C    + G C  G  C F H 
Sbjct: 270 GKCENGDACQYCHTRTEQQFHPEIYKSTK----------CNDMQQSGSCPRGPFCAFAHV 319

Query: 276 MAAPMGVYAYGYSASASPNAP 214
              P+       SA +SP  P
Sbjct: 320 EQPPLSDDLQPSSAVSSPTQP 340

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>ZC3H8_HUMAN (Q8N5P1) Zinc finger CCCH-type domain-containing protein 8|
          Length = 291

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 25/85 (29%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
 Frame = -3

Query: 498 ERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRP-------GEEL 340
           ER  +  C Y+++   C  G  CKF H     +    C     G   R         E  
Sbjct: 190 ERKGKQICKYFLER-KCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYP 248

Query: 339 CKFYSRYGICKFGVNCKFDHPMAAP 265
           CKFY     C  G  CKF H    P
Sbjct: 249 CKFYHTGTKCYQGEYCKFSHAPLTP 273

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>MEX5_CAEEL (Q9XUB2) Zinc finger protein mex-5|
          Length = 468

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -3

Query: 450 CKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGE-ELCKFYSR--YGICKFGVNCKFDH 280
           C  GA CKF H     +       +P   P    + +LCK ++R   G C +G+ C+F H
Sbjct: 286 CDMGARCKFAHGLKELRATD----APARYPNNKYKTKLCKNFARGGTGFCPYGLRCEFVH 341

Query: 279 P 277
           P
Sbjct: 342 P 342

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>CPSF4_MOUSE (Q8BQZ5) Cleavage and polyadenylation specificity factor, 30 kDa|
           subunit (CPSF 30 kDa subunit) (Clipper homolog)
           (Clipper/CPSF 30K)
          Length = 211

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
 Frame = -3

Query: 537 YLKYALQRENVFPERPDQPE----CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPM 370
           +LK A  +  + P R    E    C ++++ G CK G  C+F H    ++ P     S  
Sbjct: 44  FLKAACGKGGMCPFRHISGEKTVVCKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKF 102

Query: 369 GLPLRPGEE---LCKFYSRYGICKFGVNCKFDHP-MAAPMG 259
           G   R       +C  Y   G C  G +CKF HP    PMG
Sbjct: 103 GPLCRHRHTRRVICVNYL-VGFCPEGPSCKFMHPRFELPMG 142

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>TY3H_SCHMA (O17446) Tyrosine 3-monooxygenase (EC 1.14.16.2) (Tyrosine|
           3-hydroxylase) (TH)
          Length = 465

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 31/141 (21%), Positives = 47/141 (33%), Gaps = 23/141 (16%)
 Frame = -3

Query: 648 VDYSLQELNNTMELLDKVKAVQEIRECNHPTDPVHFLYLKYALQRENVFPERPDQPECIY 469
           V+Y+ +E+     +  K+KAV   R C    D    L  KY        P+   Q  C +
Sbjct: 186 VEYTKEEIETWGLVFTKMKAVHASRACREYIDGFQLLE-KYCNYNSESIPQL--QTICEF 242

Query: 468 YIKTGDCKFGAVCKF----------------------HHPRVRSQPPPDCILSPMG-LPL 358
             +T   +   V                         HH R    P PDCI   +G +P+
Sbjct: 243 MHRTSGFRIRPVAGLVSPKDFLASLAFRVFQCTQYIRHHSRPMHTPEPDCIHELIGHMPM 302

Query: 357 RPGEELCKFYSRYGICKFGVN 295
               +   F    G+   G +
Sbjct: 303 LVNRQFADFSQELGLASLGAS 323

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>CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing protein C19orf7|
           homolog
          Length = 1304

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGL-------PLRPGEELCKFYSRY 319
           C Y+++ G C +G  C F H     +    C     G        P   G+  CK Y   
Sbjct: 395 CKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTT 453

Query: 318 GICKFGVNCKFDH 280
           G C  G +C F H
Sbjct: 454 GNCINGDDCMFSH 466

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>SCP3_SCHPO (P41000) Protein scp3|
          Length = 583

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 9/96 (9%)
 Frame = -3

Query: 468 YIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCK 289
           + + G C  G  C F H                 L L   + +CK++ + G CKFG  C 
Sbjct: 43  FFRQGTCTSGKNCIFSHD----------------LELATEKTICKYFQK-GNCKFGSKCA 85

Query: 288 FDHPM---------AAPMGVYAYGYSASASPNAPMA 208
            +H +         A      A G S+     APMA
Sbjct: 86  LEHVLPDGRKVKTRAFAPSTTAMGSSSQNISAAPMA 121

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>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24|
          Length = 355

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAPMARR 202
           ++CK Y   G C FG  CKF H  +     Y  G+     PN+    R
Sbjct: 201 DVCKDYKETGYCGFGDTCKFLHDRSD----YLAGWQLDVLPNSSSRTR 244

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>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7|
          Length = 1303

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGL-------PLRPGEELCKFYSRY 319
           C Y+++ G C +G  C F H     +    C     G        P   G+  CK Y   
Sbjct: 396 CKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTT 454

Query: 318 GICKFGVNCKFDH 280
           G C  G +C F H
Sbjct: 455 GNCINGDDCMFSH 467

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>ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1177

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRP-------GEELCKFYSRY 319
           C Y+++ G C  G  CKF+H     +    C     G   +         E  CKFY   
Sbjct: 276 CKYFLE-GRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMHSEFPCKFYHSG 334

Query: 318 GICKFGVNCKFDH 280
             C  G  CKF H
Sbjct: 335 AKCYQGDKCKFSH 347

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>YTH1_YEAST (Q06102) Protein YTH1|
          Length = 208

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
 Frame = -3

Query: 483 PECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGL-PLR---PGEELCK-FYSRY 319
           PEC+++ K G C     C++ H    S+  P C    MG  PL    P   + K F  RY
Sbjct: 93  PECVFFSKNGYCTQSPDCQYLHIDPASK-IPKCENYEMGFCPLGSSCPRRHIKKVFCQRY 151

Query: 318 --GICKFGVN-CKFDHP 277
             G C  G + C  +HP
Sbjct: 152 MTGFCPLGKDECDMEHP 168

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>MKRN3_HUMAN (Q13064) Makorin-3 (Zinc finger protein 127) (RING finger protein|
           63)
          Length = 507

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -3

Query: 342 LCKFYSRYGICKFGVNCKFDH-----PMAAPMGVYAYGYSASASPN 220
           +C++Y  +G CK G NC++ H      MA   GV   G SA   P+
Sbjct: 100 ICRYYI-HGQCKEGENCRYSHDLSGRKMATEGGVSPPGASAGGGPS 144

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>MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61)|
          Length = 482

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = -3

Query: 486 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 307
           Q  C Y++  G CK G  C++ H    S                P   +CK++ R G C 
Sbjct: 58  QVTCRYFMH-GVCKEGDNCRYSHDLSDS----------------PYSVVCKYFQR-GYCI 99

Query: 306 FGVNCKFDH 280
           +G  C+++H
Sbjct: 100 YGDRCRYEH 108

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>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog|
          Length = 384

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDH 280
           ++CK Y   G C FG +CKF H
Sbjct: 179 DICKDYKETGFCTFGDSCKFVH 200

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>ZC3H5_CANFA (Q6EE22) Zinc finger CCCH-type domain-containing protein 5|
          Length = 810

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 21/81 (25%), Positives = 28/81 (34%)
 Frame = -3

Query: 456 GDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 277
           G C+ G  C++ H R   Q  P+   S            C    + G C  G  C F H 
Sbjct: 270 GKCENGDACQYCHTRTEQQFHPEIYKSTK----------CNDMQQSGSCPRGPFCAFAHV 319

Query: 276 MAAPMGVYAYGYSASASPNAP 214
              P+       S  +SP  P
Sbjct: 320 EQPPLSDDLQPSSTVSSPTQP 340

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>MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF127-Xp) (RING|
           finger protein 64)
          Length = 485

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 330 YSRYGICKFGVNCKFDHPMA 271
           Y +YGICK G NC++ H ++
Sbjct: 98  YFKYGICKEGDNCRYSHDLS 117

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>U2AFM_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit related-protein 2 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 2)
          Length = 462

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 489 DQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 397
           D+  C +Y KTG C+FG  C   H    S P
Sbjct: 172 DRANCPFYSKTGACRFGDRCSRKHNFPTSSP 202



 Score = 29.6 bits (65), Expect = 8.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -3

Query: 339 CKFYSRYGICKFGVNC--KFDHPMAAP 265
           C FYS+ G C+FG  C  K + P ++P
Sbjct: 176 CPFYSKTGACRFGDRCSRKHNFPTSSP 202

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>U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit-related protein 1 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 1)
          Length = 479

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 489 DQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 397
           D+  C +Y KTG C+FG  C   H    S P
Sbjct: 173 DRANCPFYSKTGACRFGDRCSRKHNFPTSSP 203



 Score = 29.6 bits (65), Expect = 8.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -3

Query: 339 CKFYSRYGICKFGVNC--KFDHPMAAP 265
           C FYS+ G C+FG  C  K + P ++P
Sbjct: 177 CPFYSKTGACRFGDRCSRKHNFPTSSP 203

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>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit related-protein 2 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 2) (NY-REN-20 antigen)
          Length = 482

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 489 DQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 397
           D+  C +Y KTG C+FG  C   H    S P
Sbjct: 168 DRANCPFYSKTGACRFGDRCSRKHNFPTSSP 198



 Score = 29.6 bits (65), Expect = 8.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -3

Query: 339 CKFYSRYGICKFGVNC--KFDHPMAAP 265
           C FYS+ G C+FG  C  K + P ++P
Sbjct: 172 CPFYSKTGACRFGDRCSRKHNFPTSSP 198

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>ZN183_BOVIN (Q67ER4) Zinc finger protein 183|
          Length = 343

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDH 280
           ++CK Y   G C FG +CKF H
Sbjct: 200 DICKDYKETGFCGFGDSCKFLH 221

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>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)|
          Length = 343

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDH 280
           ++CK Y   G C FG +CKF H
Sbjct: 200 DICKDYKETGFCGFGDSCKFLH 221

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>GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC 2.5.1.18)|
           (Auxin-regulated protein parC)
          Length = 221

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 552 PVHFLYLKYALQRENVFPERPDQPECIYYIKTGDCKFG 439
           P    + K  +QRE+V    PDQP+ + ++K    KFG
Sbjct: 182 PKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFG 219

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>GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PCNT107)
          Length = 221

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 552 PVHFLYLKYALQRENVFPERPDQPECIYYIKTGDCKFG 439
           P    + K  +QRE+V    PDQP+ + ++K    KFG
Sbjct: 182 PKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFG 219

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>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)|
          Length = 322

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDH 280
           ++CK Y   G C FG +CKF H
Sbjct: 194 DICKDYKETGFCGFGDSCKFLH 215

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>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24|
          Length = 332

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 345 ELCKFYSRYGICKFGVNCKFDH 280
           ++CK Y   G C FG +CKF H
Sbjct: 166 DVCKDYKLTGYCGFGDSCKFSH 187

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>RDRP_PVX (P09395) RNA replication protein (165 kDa protein) (ORF 1 protein)|
           [Includes: RNA-directed RNA polymerase (EC 2.7.7.48);
           Helicase (EC 3.6.1.-)]
          Length = 1456

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 108 AFYTSSSSRSIKVKLPGSLRTRTQTRRATPGDGEPWARW 224
           A +T SS    +VKLPG     T T++    +G PW  W
Sbjct: 586 ASFTDSSVEEEQVKLPGKEAVETATQQVI--EGLPWKHW 622

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>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III|
          Length = 547

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 16/65 (24%), Positives = 24/65 (36%)
 Frame = -3

Query: 468 YIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCK 289
           + + G C  G  C F H     +P                  +CK++ + G CKFG  C 
Sbjct: 49  FFRNGTCTAGENCPFSHSLETERP------------------ICKYFLK-GNCKFGPKCA 89

Query: 288 FDHPM 274
             H +
Sbjct: 90  LSHAL 94

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>CTH2_YEAST (P47977) Zinc finger protein CTH2 (YTIS11 protein)|
          Length = 285

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 18/75 (24%), Positives = 28/75 (37%)
 Frame = -3

Query: 477 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGV 298
           C  +   G C +G+ C+F H     +    C         +P    C  + + G C +G 
Sbjct: 175 CESFTLKGSCPYGSKCQFAHGLGELKVKKSC----KNFRTKP----CVNWEKLGYCPYGR 226

Query: 297 NCKFDHPMAAPMGVY 253
            C F H     + VY
Sbjct: 227 RCCFKHGDDNDIAVY 241

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>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1|
            light chain LC2]
          Length = 2774

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -3

Query: 447  KFGAVCKFHHPRVRSQPPPDCILSPMGLPLRP 352
            K G V   HHPR    PPP  +  P   P RP
Sbjct: 2519 KAGGVSGTHHPRPGHDPPPTPLPDPRPSPPRP 2550

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>CWC2_LEPMC (Q6T412) Pre-mRNA-splicing factor CWC2|
          Length = 421

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 354 PGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVY 253
           PG   C F++R GIC  GV+C++ H +     ++
Sbjct: 127 PGSYFCLFFAR-GICPKGVDCEYLHRLPTVTDIF 159

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>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24|
          Length = 329

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 22/75 (29%), Positives = 31/75 (41%)
 Frame = -3

Query: 636 LQELNNTMELLDKVKAVQEIRECNHPTDPVHFLYLKYALQRENVFPERPDQPECIYYIKT 457
           L  +N T E LDK      I+  +H             ++   +   +PD   C  Y +T
Sbjct: 145 LPTINKTRETLDKKMKSGPIKATSH-------------VRTITLMDYQPDV--CKDYKET 189

Query: 456 GDCKFGAVCKFHHPR 412
           G C +G  CKF H R
Sbjct: 190 GFCGYGDSCKFLHDR 204

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>CTH1_YEAST (P47976) Zinc finger protein CTH1|
          Length = 325

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = -3

Query: 387 CILSPMGLPLRPGE-----ELCKFYSRYGICKFGVNCKFDH 280
           C  +P+ LP    +     ELC+ ++  G CK+G  C+F H
Sbjct: 189 CRRAPLQLPQLVNKTLYKTELCESFTIKGYCKYGNKCQFAH 229

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>DPOL_RCMVM (Q85428) DNA polymerase (EC 2.7.7.7)|
          Length = 1173

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 318 GICKFGVNCKFDHPMAAPMGVYAYGYSASASPN 220
           G  + G  C  D     P+ V AY Y A+ASPN
Sbjct: 488 GRARVGKYCVQDGARQGPLNVIAYHYEAAASPN 520


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,876,088
Number of Sequences: 219361
Number of extensions: 2100165
Number of successful extensions: 6336
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 5764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6222
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result