ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaak4j13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT001352.1| Drosophila melanogaster AT26615 full insert cDNA 42 0.47
2emb|AL663107.13| Mouse DNA sequence from clone RP23-465K20 on ch... 40 1.9
3gb|AC087283.10| Homo sapiens chromosome 15, clone RP11-597G23, c... 40 1.9
4gb|AC093905.3| Homo sapiens BAC clone RP11-739C17 from 4, comple... 40 1.9
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
6emb|BX005341.6| Zebrafish DNA sequence from clone DKEY-209J17 in... 40 1.9
7dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
8dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
9gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 1.9
10ref|NM_201108.1| Danio rerio zgc:63693 (zgc:63693), mRNA 38 7.4
11gb|AC168054.4| Mus musculus BAC clone RP24-571H12 from chromosom... 38 7.4
12gb|AC120135.7| Mus musculus chromosome 7, clone RP23-64O4, compl... 38 7.4
13gb|AC161260.2| Mus musculus BAC clone RP23-448A11 from chromosom... 38 7.4
14gb|BC055208.1| Danio rerio zgc:63693, mRNA (cDNA clone MGC:63693... 38 7.4
15ref|NM_027315.2| Mus musculus ubiquitin-conjugating enzyme E2Q (... 38 7.4
16emb|CR848816.11| Zebrafish DNA sequence from clone DKEY-99F10 in... 38 7.4
17emb|CT009681.2| Pan troglodytes chromosome X BAC PTB-134F20, com... 38 7.4
18gb|AC127364.3| Mus musculus BAC clone RP23-3F6 from chromosome 1... 38 7.4
19ref|XM_812385.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 7.4
20emb|AL954134.16| Zebrafish DNA sequence from clone CH211-267E7, ... 38 7.4
21emb|CR753865.8| Zebrafish DNA sequence from clone DKEY-172B2 in ... 38 7.4
22gb|AC102568.8| Mus musculus chromosome 1, clone RP23-224O10, com... 38 7.4
23gb|AC020786.20| Mus musculus chromosome 7, clone RP23-178G8, com... 38 7.4
24emb|CR376855.11| Zebrafish DNA sequence from clone DKEY-56N2 in ... 38 7.4
25emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 o... 38 7.4
26emb|AL031542.1|HS1147O16 Human DNA sequence from clone RP5-1147O... 38 7.4
27emb|AL031771.1|HS217O16 Human DNA sequence from clone RP1-217O16... 38 7.4
28gb|AC128685.11| Homo sapiens 3 BAC RP11-535I24 (Roswell Park Can... 38 7.4
29gb|AY112699.1| Mus musculus ubiquitin-conjugating enzyme E2Q (Ub... 38 7.4
30emb|CR450817.6| Zebrafish DNA sequence from clone DKEYP-74B4 in ... 38 7.4
31emb|BX649410.18| Mouse DNA sequence from clone RP23-168C6 on chr... 38 7.4
32emb|BX005275.25| Zebrafish DNA sequence from clone DKEY-118J18 i... 38 7.4
33emb|BX571949.19| Zebrafish DNA sequence from clone DKEY-25F1 in ... 38 7.4
34gb|AC109583.2| Homo sapiens chromosome 3 clone RP11-427P5, compl... 38 7.4
35emb|BX322647.12| Zebrafish DNA sequence from clone DKEYP-86F8 in... 38 7.4
36gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, compl... 38 7.4
37emb|BX005216.10| Zebrafish DNA sequence from clone CH211-286O21,... 38 7.4
38gb|AC158513.2| Mus musculus BAC clone RP24-404N1 from chromosome... 38 7.4
39gb|AC154835.3| Mus musculus BAC clone RP24-573N16 from chromosom... 38 7.4
40emb|BX005193.17| Zebrafish DNA sequence from clone CH211-146M5, ... 38 7.4
41gb|AC154331.1| Mus musculus BAC clone RP23-256F11 from chromosom... 38 7.4
42emb|BX571957.10| Zebrafish DNA sequence from clone DKEYP-117B4 i... 38 7.4
43emb|BX649469.8| Zebrafish DNA sequence from clone DKEY-273O8 in ... 38 7.4
44emb|BX072561.8| Zebrafish DNA sequence from clone CH211-157C18 i... 38 7.4
45emb|AL929210.4| Zebrafish DNA sequence from clone CH211-142E15, ... 38 7.4
46emb|BX248104.5| Zebrafish DNA sequence from clone DKEY-77P13 in ... 38 7.4
47emb|BX469886.5| Zebrafish DNA sequence from clone CH211-127D20 i... 38 7.4
48emb|BX927095.15| Zebrafish DNA sequence from clone CH211-202E13 ... 38 7.4
49emb|CT486009.11| Mouse DNA sequence from clone RP24-160E3 on chr... 38 7.4
50emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, ... 38 7.4
51gb|AC003101.1|AC003101 Homo sapiens chromosome 17, clone HRPC41C... 38 7.4
52gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome... 38 7.4
53emb|AL929106.5| Mouse DNA sequence from clone RP23-446N16 on chr... 38 7.4
54emb|X17579.1|HSHS5R Human specific HS5 DNA 38 7.4 
>gb|BT001352.1| Drosophila melanogaster AT26615 full insert cDNA
          Length = 1098

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 22  acatttcccctttgcattctt 42
           |||||||||||||||||||||
Sbjct: 791 acatttcccctttgcattctt 771
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>emb|AL663107.13| Mouse DNA sequence from clone RP23-465K20 on chromosome 11 Contains a
             novel gene (2210415F13Rik), an NADH dehydrogenase
             (ubiquinone) Fe-S protein 3 (Ndufs3) pseudogene, a novel
             pseudogene, a novel gene (1810065E05Rik), a novel gene
             similar to rat solute carrier family 11 member 1
             (Slc11a1), a novel gene, the  Olfr30 gene for olfactory
             receptor 30, an olfactory receptor (MOR284-1P) pseudogene,
             the gene for olfactory receptor MOR284-2 (LOC216774),  a
             novel gene similar to MOR275 (LOC193140), a ribosomal
             protein L24 (Rpl24) pseudogene, the gene for olfactory
             receptor MOR275-1, a DEAD (Asp-Glu-Ala-Asp) box
             polypeptide 5 (Ddx5) pseudogene, an olfactory receptor
             (MOR275-3) pseudogene and a CpG island, complete sequence
          Length = 191700

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    cattctttgggaaaagaatg 55
             ||||||||||||||||||||
Sbjct: 38502 cattctttgggaaaagaatg 38521
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>gb|AC087283.10| Homo sapiens chromosome 15, clone RP11-597G23, complete sequence
          Length = 207548

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    tctttgggaaaagaatgaca 58
             ||||||||||||||||||||
Sbjct: 77355 tctttgggaaaagaatgaca 77336
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>gb|AC093905.3| Homo sapiens BAC clone RP11-739C17 from 4, complete sequence
          Length = 184862

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     ttgcattctttgggaaaaga 52
              ||||||||||||||||||||
Sbjct: 134090 ttgcattctttgggaaaaga 134109
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 75       ggcataggccagcaaatctg 94
                ||||||||||||||||||||
Sbjct: 19238688 ggcataggccagcaaatctg 19238707
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>emb|BX005341.6| Zebrafish DNA sequence from clone DKEY-209J17 in linkage group 16,
              complete sequence
          Length = 158356

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 33     ttgcattctttgggaaaagaatga 56
              ||||||| ||||||||||||||||
Sbjct: 123209 ttgcattgtttgggaaaagaatga 123186
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>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0001B01
          Length = 147585

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    ggcataggccagcaaatctg 94
             ||||||||||||||||||||
Sbjct: 76452 ggcataggccagcaaatctg 76471
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>dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0043B22
          Length = 158857

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     ggcataggccagcaaatctg 94
              ||||||||||||||||||||
Sbjct: 142173 ggcataggccagcaaatctg 142192
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 93      tgtacaggcagattcagcac 112
               ||||||||||||||||||||
Sbjct: 1171617 tgtacaggcagattcagcac 1171636
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>ref|NM_201108.1| Danio rerio zgc:63693 (zgc:63693), mRNA
          Length = 1873

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 38   ttctttgggaaaagaatga 56
            |||||||||||||||||||
Sbjct: 1719 ttctttgggaaaagaatga 1737
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>gb|AC168054.4| Mus musculus BAC clone RP24-571H12 from chromosome 9, complete
            sequence
          Length = 136974

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 71   cagaggcataggccagcaaatct 93
            |||||||| ||||||||||||||
Sbjct: 4617 cagaggcagaggccagcaaatct 4639
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>gb|AC120135.7| Mus musculus chromosome 7, clone RP23-64O4, complete sequence
          Length = 220872

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 123   aaacagggcatgcagttct 141
             |||||||||||||||||||
Sbjct: 30684 aaacagggcatgcagttct 30666
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>gb|AC161260.2| Mus musculus BAC clone RP23-448A11 from chromosome 9, complete sequence
          Length = 190608

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 71     cagaggcataggccagcaaatct 93
              |||||||| ||||||||||||||
Sbjct: 187381 cagaggcagaggccagcaaatct 187359
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>gb|BC055208.1| Danio rerio zgc:63693, mRNA (cDNA clone MGC:63693 IMAGE:5916407),
            complete cds
          Length = 1873

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 38   ttctttgggaaaagaatga 56
            |||||||||||||||||||
Sbjct: 1719 ttctttgggaaaagaatga 1737
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>ref|NM_027315.2| Mus musculus ubiquitin-conjugating enzyme E2Q (putative) (Ube2q),
            mRNA
          Length = 3094

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 39   tctttgggaaaagaatgacacgtttgt 65
            |||||||||||| ||| ||||||||||
Sbjct: 1786 tctttgggaaaacaattacacgtttgt 1812
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>emb|CR848816.11| Zebrafish DNA sequence from clone DKEY-99F10 in linkage group 11,
              complete sequence
          Length = 158354

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 34     tgcattctttgggaaaagaatga 56
              |||||| ||||||||||||||||
Sbjct: 100417 tgcattgtttgggaaaagaatga 100439
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>emb|CT009681.2| Pan troglodytes chromosome X BAC PTB-134F20, complete sequence
          Length = 180303

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 86     gcaaatctgtacaggcaga 104
              |||||||||||||||||||
Sbjct: 128878 gcaaatctgtacaggcaga 128896
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>gb|AC127364.3| Mus musculus BAC clone RP23-3F6 from chromosome 1, complete sequence
          Length = 204558

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 26     ttcccctttgcattctttg 44
              |||||||||||||||||||
Sbjct: 181102 ttcccctttgcattctttg 181120
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>ref|XM_812385.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508347.80) partial mRNA
          Length = 1779

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 24   atttcccctttgcattctt 42
            |||||||||||||||||||
Sbjct: 1600 atttcccctttgcattctt 1582
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>emb|AL954134.16| Zebrafish DNA sequence from clone CH211-267E7, complete sequence
          Length = 160551

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 34    tgcattctttgggaaaagaatga 56
             |||||| ||||||||||||||||
Sbjct: 71523 tgcattgtttgggaaaagaatga 71545
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>emb|CR753865.8| Zebrafish DNA sequence from clone DKEY-172B2 in linkage group 14,
             complete sequence
          Length = 134371

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    tgcattctttgggaaaagaatga 56
             |||||| ||||||||||||||||
Sbjct: 58950 tgcattgtttgggaaaagaatga 58928
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>gb|AC102568.8| Mus musculus chromosome 1, clone RP23-224O10, complete sequence
          Length = 239053

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     ttcccctttgcattctttg 44
              |||||||||||||||||||
Sbjct: 168857 ttcccctttgcattctttg 168839
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>gb|AC020786.20| Mus musculus chromosome 7, clone RP23-178G8, complete sequence
          Length = 227330

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 123    aaacagggcatgcagttct 141
              |||||||||||||||||||
Sbjct: 198539 aaacagggcatgcagttct 198521
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>emb|CR376855.11| Zebrafish DNA sequence from clone DKEY-56N2 in linkage group 25, complete
              sequence
          Length = 219164

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 34     tgcattctttgggaaaagaatga 56
              |||||| ||||||||||||||||
Sbjct: 104969 tgcattgtttgggaaaagaatga 104991
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>emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 on chromosome 1q23.1-24.3
             Contains part of the gene for HBxAg transactivated protein
             2 (XTP2), complete sequence
          Length = 99886

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 31    ctttgcattctttgggaaa 49
             |||||||||||||||||||
Sbjct: 40434 ctttgcattctttgggaaa 40416
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>emb|AL031542.1|HS1147O16 Human DNA sequence from clone RP5-1147O16 on chromosome Xp21.1-21.3
             Contains part of the DMD gene for dystrophin (muscular
             dystrophy, Duchenne and Becker types), complete sequence
          Length = 132290

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 86    gcaaatctgtacaggcaga 104
             |||||||||||||||||||
Sbjct: 63260 gcaaatctgtacaggcaga 63242
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>emb|AL031771.1|HS217O16 Human DNA sequence from clone RP1-217O16 on chromosome 6q24 Contains
             GSS, complete sequence
          Length = 87552

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    acatttcccctttgcattc 40
             |||||||||||||||||||
Sbjct: 40141 acatttcccctttgcattc 40159
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>gb|AC128685.11| Homo sapiens 3 BAC RP11-535I24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 121201

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    acatttcccctttgcattc 40
             |||||||||||||||||||
Sbjct: 32358 acatttcccctttgcattc 32340
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>gb|AY112699.1| Mus musculus ubiquitin-conjugating enzyme E2Q (Ube2q) mRNA, complete
            cds
          Length = 3094

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 39   tctttgggaaaagaatgacacgtttgt 65
            |||||||||||| ||| ||||||||||
Sbjct: 1786 tctttgggaaaacaattacacgtttgt 1812
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>emb|CR450817.6| Zebrafish DNA sequence from clone DKEYP-74B4 in linkage group 25,
             complete sequence
          Length = 196897

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    tgcattctttgggaaaagaatga 56
             |||||| ||||||||||||||||
Sbjct: 27171 tgcattatttgggaaaagaatga 27149
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>emb|BX649410.18| Mouse DNA sequence from clone RP23-168C6 on chromosome 4 Contains a
             ribosomal protein S6 (Rps6) pseudogene and a novel gene,
             complete sequence
          Length = 231582

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 118   agggaaaacagggcatgca 136
             |||||||||||||||||||
Sbjct: 46206 agggaaaacagggcatgca 46188
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>emb|BX005275.25| Zebrafish DNA sequence from clone DKEY-118J18 in linkage group 24,
              complete sequence
          Length = 174489

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 106    tcagcaccaacaagggaaa 124
              |||||||||||||||||||
Sbjct: 116123 tcagcaccaacaagggaaa 116141
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>emb|BX571949.19| Zebrafish DNA sequence from clone DKEY-25F1 in linkage group 11,
             complete sequence
          Length = 149012

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    tgcattctttgggaaaagaatga 56
             |||||| ||||||||||||||||
Sbjct: 86000 tgcattgtttgggaaaagaatga 85978
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>gb|AC109583.2| Homo sapiens chromosome 3 clone RP11-427P5, complete sequence
          Length = 177251

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 68     aaacagaggcataggccag 86
              |||||||||||||||||||
Sbjct: 125700 aaacagaggcataggccag 125718
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>emb|BX322647.12| Zebrafish DNA sequence from clone DKEYP-86F8 in linkage group 1,
             complete sequence
          Length = 216540

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 34    tgcattctttgggaaaagaatga 56
             |||||| ||||||||||||||||
Sbjct: 17189 tgcattgtttgggaaaagaatga 17211
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>gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, complete sequence
          Length = 194729

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 68    aaacagaggcataggccag 86
             |||||||||||||||||||
Sbjct: 38065 aaacagaggcataggccag 38083
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>emb|BX005216.10| Zebrafish DNA sequence from clone CH211-286O21, complete sequence
          Length = 163291

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 34     tgcattctttgggaaaagaatga 56
              ||||| |||||||||||||||||
Sbjct: 149219 tgcatcctttgggaaaagaatga 149197
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>gb|AC158513.2| Mus musculus BAC clone RP24-404N1 from chromosome 9, complete sequence
          Length = 156478

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 67    taaacagaggcataggcca 85
             |||||||||||||||||||
Sbjct: 96515 taaacagaggcataggcca 96497
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>gb|AC154835.3| Mus musculus BAC clone RP24-573N16 from chromosome 13, complete
             sequence
          Length = 166266

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 135   cagttctctcctacagaac 153
             |||||||||||||||||||
Sbjct: 22803 cagttctctcctacagaac 22785
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>emb|BX005193.17| Zebrafish DNA sequence from clone CH211-146M5, complete sequence
          Length = 169110

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 34    tgcattctttgggaaaagaatga 56
             |||||| ||||||||||||||||
Sbjct: 18074 tgcattgtttgggaaaagaatga 18096
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>gb|AC154331.1| Mus musculus BAC clone RP23-256F11 from chromosome 13, complete
             sequence
          Length = 175414

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 135   cagttctctcctacagaac 153
             |||||||||||||||||||
Sbjct: 52944 cagttctctcctacagaac 52962
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>emb|BX571957.10| Zebrafish DNA sequence from clone DKEYP-117B4 in linkage group 18,
              complete sequence
          Length = 179945

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 34     tgcattctttgggaaaagaatga 56
              |||||| ||||||||||||||||
Sbjct: 140108 tgcattgtttgggaaaagaatga 140130
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>emb|BX649469.8| Zebrafish DNA sequence from clone DKEY-273O8 in linkage group 7,
             complete sequence
          Length = 80705

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 34    tgcattctttgggaaaagaatga 56
             |||||| ||||||||||||||||
Sbjct: 66046 tgcattgtttgggaaaagaatga 66068
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>emb|BX072561.8| Zebrafish DNA sequence from clone CH211-157C18 in linkage group 8,
             complete sequence
          Length = 179087

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 34    tgcattctttgggaaaagaatga 56
             |||||| ||||||||||||||||
Sbjct: 95542 tgcattgtttgggaaaagaatga 95564
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>emb|AL929210.4| Zebrafish DNA sequence from clone CH211-142E15, complete sequence
          Length = 168383

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    tgcattctttgggaaaagaatga 56
             |||||| ||||||||||||||||
Sbjct: 47422 tgcattgtttgggaaaagaatga 47400
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>emb|BX248104.5| Zebrafish DNA sequence from clone DKEY-77P13 in linkage group 20,
             complete sequence
          Length = 139851

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    tgcattctttgggaaaagaatga 56
             |||||| ||||||||||||||||
Sbjct: 35231 tgcattgtttgggaaaagaatga 35209
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>emb|BX469886.5| Zebrafish DNA sequence from clone CH211-127D20 in linkage group 19,
             complete sequence
          Length = 151598

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 34    tgcattctttgggaaaagaatga 56
             |||||| ||||||||||||||||
Sbjct: 39779 tgcattgtttgggaaaagaatga 39801
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>emb|BX927095.15| Zebrafish DNA sequence from clone CH211-202E13 in linkage group 17,
              complete sequence
          Length = 211277

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 34     tgcattctttgggaaaagaatga 56
              |||||| ||||||||||||||||
Sbjct: 148595 tgcattgtttgggaaaagaatga 148573
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>emb|CT486009.11| Mouse DNA sequence from clone RP24-160E3 on chromosome 9, complete
              sequence
          Length = 193947

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 67     taaacagaggcataggcca 85
              |||||||||||||||||||
Sbjct: 121143 taaacagaggcataggcca 121125
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>emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, complete sequence
          Length = 174986

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    tgcattctttgggaaaagaatga 56
             |||||| ||||||||||||||||
Sbjct: 60409 tgcattgtttgggaaaagaatga 60387
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>gb|AC003101.1|AC003101 Homo sapiens chromosome 17, clone HRPC41C23, complete sequence
          Length = 208396

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 92     ctgtacaggcagattcagc 110
              |||||||||||||||||||
Sbjct: 171541 ctgtacaggcagattcagc 171559
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>gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome 9, complete sequence
          Length = 149387

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 71    cagaggcataggccagcaaatct 93
             |||||||| ||||||||||||||
Sbjct: 91549 cagaggcagaggccagcaaatct 91571
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>emb|AL929106.5| Mouse DNA sequence from clone RP23-446N16 on chromosome 2, complete
              sequence
          Length = 130872

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 114    aacaagggaaaacagggca 132
              |||||||||||||||||||
Sbjct: 119050 aacaagggaaaacagggca 119032
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>emb|X17579.1|HSHS5R Human specific HS5 DNA
          Length = 3768

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 70   acagaggcataggccagca 88
            |||||||||||||||||||
Sbjct: 2043 acagaggcataggccagca 2025


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,496,096
Number of Sequences: 3902068
Number of extensions: 1496096
Number of successful extensions: 103805
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103671
Number of HSP's gapped (non-prelim): 134
length of query: 154
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 132
effective length of database: 17,147,199,772
effective search space: 2263430369904
effective search space used: 2263430369904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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