Clone Name | rbaak4j05 |
---|---|
Clone Library Name | barley_pub |
>GLND_CHRVO (Q7NTY6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 856 Score = 40.0 bits (92), Expect = 0.005 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%) Frame = -3 Query: 375 DDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS---YRGK 205 DD +L + + DRPGLL + K++AD + V+S + T G A+ F VS + Sbjct: 781 DDKDSDFILSIVAGDRPGLLARIAKVLADYRLNVRSAKIMTLGGRAEDSFQVSGAALKDD 840 Query: 204 PLIKALQQVLANSLR 160 AL+ L +LR Sbjct: 841 KTALALEAALITALR 855
>GLND_CAUCR (Q9AC53) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 940 Score = 37.7 bits (86), Expect = 0.024 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 2/104 (1%) Frame = -3 Query: 525 LLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIEIYDDGPERSLLV 346 L +A+ + L P S+ A F + P + D+ V Sbjct: 801 LADALEAAGKGDALAVEPRRGSEQTRAAAFAIAPSVTI------------DNDASNDATV 848 Query: 345 VESA--DRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHV 220 VE++ DRPGLL L K +AD +++QS D G A F+V Sbjct: 849 VEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYV 892
>GLND_SILPO (Q5LWE5) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 908 Score = 37.7 bits (86), Expect = 0.024 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 3/84 (3%) Frame = -3 Query: 402 DIATHIEIYDDGPE-RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKF 226 ++ THI ++G + +++ V++ DRPGLL DL + +A N+ + + T G F Sbjct: 812 NVPTHITFDNEGSDIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSF 871 Query: 225 HVS--YRGKPLIKALQQVLANSLR 160 +V + K +A Q+ L LR Sbjct: 872 YVKDMFGLKYHSEAKQRTLETKLR 895
>GLND_AGRT5 (Q8UIF1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 942 Score = 37.4 bits (85), Expect = 0.032 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -3 Query: 357 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 +++ VE DRPGLL D+ +IAD+++ + S T G F+V+ Sbjct: 840 TVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
>GLND_RHOS4 (Q3J5H6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 930 Score = 37.4 bits (85), Expect = 0.032 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = -3 Query: 393 THIEIYDDGPE-RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHV 220 THI ++G + +++ V++ DRPGLL DL + +A NI + S T G F+V Sbjct: 838 THIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
>GLND_XANCP (Q8PAU4) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 869 Score = 36.2 bits (82), Expect = 0.070 Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 2/139 (1%) Frame = -3 Query: 573 FAITKSSTGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIA 394 F + + D L A+R + ++L+ P + P ++ A Sbjct: 735 FEVLPQDSSADGDPQRLAAALRQVLAGDLLKVRPSRRAV-----------PRQLRHFRFA 783 Query: 393 THIEIYDD-GPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 +E + G R+ + + + DRPGLL D+ ++ ++ V T G A+ +F ++ Sbjct: 784 PRVEFSESAGGRRTRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQIT 843 Query: 216 -YRGKPLIKALQQVLANSL 163 +PL A +Q L ++L Sbjct: 844 DEHDRPLPDAARQALRDAL 862
>GLND_XANC8 (Q4USS0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 869 Score = 36.2 bits (82), Expect = 0.070 Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 2/139 (1%) Frame = -3 Query: 573 FAITKSSTGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIA 394 F + + D L A+R + ++L+ P + P ++ A Sbjct: 735 FEVLPQDSSADGDPQRLAAALRQVLAGDLLKVRPSRRAV-----------PRQLRHFRFA 783 Query: 393 THIEIYDD-GPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 +E + G R+ + + + DRPGLL D+ ++ ++ V T G A+ +F ++ Sbjct: 784 PRVEFSESAGGRRTRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQIT 843 Query: 216 -YRGKPLIKALQQVLANSL 163 +PL A +Q L ++L Sbjct: 844 DEHDRPLPDAARQALRDAL 862
>GLND_RHITR (Q53245) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 948 Score = 35.0 bits (79), Expect = 0.16 Identities = 15/47 (31%), Positives = 29/47 (61%) Frame = -3 Query: 357 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 +++ VE DRPGLL ++ +++D+++ +QS T G F+V+ Sbjct: 839 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885
>GLND_RHOPA (P62223) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 929 Score = 35.0 bits (79), Expect = 0.16 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 2/109 (1%) Frame = -3 Query: 537 DDPELLEAVRL-TIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIEIYDDGPE 361 D+ E A R+ I +LE +A A+ G + V+ +EI ++ + Sbjct: 788 DEDEGRRATRIGETIEEVLEGKLRLPEAVARRASSGSKAKLRAFVVE--PEVEINNNWSD 845 Query: 360 R-SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 R +++ V DRPGLL L I+ +N+ + S T G A+ F+V+ Sbjct: 846 RYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 894
>GLND_RHILV (Q9RAE4) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 944 Score = 35.0 bits (79), Expect = 0.16 Identities = 15/47 (31%), Positives = 29/47 (61%) Frame = -3 Query: 357 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 +++ VE DRPGLL ++ +++D+++ +QS T G F+V+ Sbjct: 838 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 884
>GLND_PSYAR (Q4FUP5) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 915 Score = 34.3 bits (77), Expect = 0.27 Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Frame = -3 Query: 423 PTEVVDVDIATHIEI-YDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 P ++ D+ T I ++D + ++ +E+ D+PGLL + ++ I V + T G Sbjct: 816 PRQLKHFDVETTINFEFNDASSQHIMSLETLDQPGLLARVGQVFLQQQIEVHAARITTLG 875 Query: 246 LLAKAKFHVSYRGKPLIKA 190 A+ F++S + + A Sbjct: 876 ERAEDMFYISDQNDQALSA 894
>GLND_XANC5 (Q3BVJ6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 869 Score = 34.3 bits (77), Expect = 0.27 Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 2/89 (2%) Frame = -3 Query: 423 PTEVVDVDIATHIEIYDD-GPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 P ++ A +E + G R+ + + + DRPGLL D+ ++ ++ V T G Sbjct: 774 PRQLRHFRFAPRVEFSESAGGRRTRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFG 833 Query: 246 LLAKAKFHVS-YRGKPLIKALQQVLANSL 163 A+ +F ++ +PL ++ +Q L ++L Sbjct: 834 ERAEDQFQITDEHDRPLSESARQALRDAL 862
>GLND_XANAC (Q8PMJ8) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 869 Score = 34.3 bits (77), Expect = 0.27 Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 2/89 (2%) Frame = -3 Query: 423 PTEVVDVDIATHIEIYDD-GPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 P ++ A +E + G R+ + + + DRPGLL D+ ++ ++ V T G Sbjct: 774 PRQLRHFRFAPRVEFSESAGGRRTRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFG 833 Query: 246 LLAKAKFHVS-YRGKPLIKALQQVLANSL 163 A+ +F ++ +PL ++ +Q L ++L Sbjct: 834 ERAEDQFQITDEHDRPLSESARQALRDAL 862
>GLND_AZOBR (Q8RQD1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 933 Score = 34.3 bits (77), Expect = 0.27 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = -3 Query: 426 PPTEVVDVDIATHIEIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 PP ++D + +T +++ V DRPGLL DL + + ++ + + S + T G Sbjct: 844 PPRVLIDNNAST---------THTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYG 894 Query: 246 LLAKAKFHV 220 A F+V Sbjct: 895 EKAIDVFYV 903
>GLND_BRUSU (Q8G312) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 934 Score = 34.3 bits (77), Expect = 0.27 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -3 Query: 357 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 +++ VE DRPGLL +L +I+D+++ + S T G F+V+ Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
>GLND_BRUME (Q8YES3) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 934 Score = 34.3 bits (77), Expect = 0.27 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -3 Query: 357 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 +++ VE DRPGLL +L +I+D+++ + S T G F+V+ Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
>GLND_BRUAB (Q57FN0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 934 Score = 34.3 bits (77), Expect = 0.27 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -3 Query: 357 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 +++ VE DRPGLL +L +I+D+++ + S T G F+V+ Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
>GLND_BRUA2 (Q2YNZ1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 934 Score = 34.3 bits (77), Expect = 0.27 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -3 Query: 357 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 +++ VE DRPGLL +L +I+D+++ + S T G F+V+ Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
>GLND_PSEAE (Q9Z9H0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 900 Score = 33.9 bits (76), Expect = 0.35 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 7/94 (7%) Frame = -3 Query: 423 PTEVVDVDIATHIEIYDDGPER-SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 P ++ A + I D + S+L V + DRPGLL + I D +++VQ+ + T G Sbjct: 792 PRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLG 851 Query: 246 LLAKAKFHVS-YRGKP-----LIKALQQVLANSL 163 + F+++ R +P L K LQ L L Sbjct: 852 ERVEDVFYITDARNQPLADPDLCKRLQAALVEQL 885
>GLND_BRAJA (Q89VX9) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 929 Score = 33.5 bits (75), Expect = 0.46 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = -3 Query: 357 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 +++ V DRPGLL +L I+ +N+ + S T G A+ F+V+ Sbjct: 849 TVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
>GLND_LEGPL (Q5WVX6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 861 Score = 33.1 bits (74), Expect = 0.60 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Frame = -3 Query: 402 DIATHIEIYDDGPE-RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKF 226 ++ T I DD ++ L + + DRPGLL + ++ +NI + + + T G + F Sbjct: 771 NVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMF 830 Query: 225 HVS 217 ++S Sbjct: 831 YIS 833
>GLND_LEGPH (Q5ZUS2) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 861 Score = 33.1 bits (74), Expect = 0.60 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Frame = -3 Query: 402 DIATHIEIYDDGPE-RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKF 226 ++ T I DD ++ L + + DRPGLL + ++ +NI + + + T G + F Sbjct: 771 NVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMF 830 Query: 225 HVS 217 ++S Sbjct: 831 YIS 833
>GLND_LEGPA (Q5X4J1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 861 Score = 33.1 bits (74), Expect = 0.60 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Frame = -3 Query: 402 DIATHIEIYDDGPE-RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKF 226 ++ T I DD ++ L + + DRPGLL + ++ +NI + + + T G + F Sbjct: 771 NVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMF 830 Query: 225 HVS 217 ++S Sbjct: 831 YIS 833
>GLND_NITWN (Q3SWE0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 925 Score = 33.1 bits (74), Expect = 0.60 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = -3 Query: 357 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 +++ V DRPGLL L I+ +N+ + S T G A+ F+V+ Sbjct: 848 TMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 894
>GLND_THICR (Q31G41) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 888 Score = 32.7 bits (73), Expect = 0.78 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Frame = -3 Query: 423 PTEVVDVDIATHIEIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGL 244 P + ++ THI+ + E + L + + D PGLL + + I V + +T G Sbjct: 794 PRRIRVFEMPTHIQFQEINEELTELSISTKDIPGLLAKIGQAFKSCKIRVHDAKINTVGE 853 Query: 243 LAKAKFHVSYRGKPLI------KALQQVLANSL 163 A+ F +S I + L+Q L N++ Sbjct: 854 KAEDTFMISSTTNESIHTRHSQEELKQALLNNI 886
>SPOT_SPICI (O34098) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 749 Score = 32.7 bits (73), Expect = 0.78 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = -3 Query: 345 VESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 +E+ DRP LLVD+ K+++ +N +VQ + G Sbjct: 677 IEAIDRPALLVDVTKVLSHLNASVQMMSANVSG 709
>GLND_RHILO (Q98C27) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 933 Score = 32.3 bits (72), Expect = 1.0 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = -3 Query: 357 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 S++ VE DRPGLL ++ ++D+++ + S T G F+V+ Sbjct: 847 SVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT 893
>GLND_XANOR (Q5H1D3) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 869 Score = 32.3 bits (72), Expect = 1.0 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = -3 Query: 360 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS-YRGKPLIKALQ 184 R+ + + + DRPGLL D+ ++ ++ V T G A+ +F ++ +PL ++ + Sbjct: 796 RTRISLVAPDRPGLLADVAHVLRVQHLRVHDARIATFGERAEDQFQITDEHDRPLSESAR 855 Query: 183 QVLANSL 163 Q L ++L Sbjct: 856 QALRDAL 862
>GLND_XANOM (Q2P497) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 869 Score = 32.3 bits (72), Expect = 1.0 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = -3 Query: 360 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS-YRGKPLIKALQ 184 R+ + + + DRPGLL D+ ++ ++ V T G A+ +F ++ +PL ++ + Sbjct: 796 RTRISLVAPDRPGLLADVAHVLRVQHLRVHDARIATFGERAEDQFQITDEHDRPLSESAR 855 Query: 183 QVLANSL 163 Q L ++L Sbjct: 856 QALRDAL 862
>TEAD3_MOUSE (P70210) Transcriptional enhancer factor TEF-5 (TEA domain family| member 3) (TEAD-3) (ETF-related factor 1) (ETFR-1) (DTEF-1) Length = 439 Score = 32.0 bits (71), Expect = 1.3 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -3 Query: 429 EPPTEVVDVDIATHIEIYDDGPERSLLVVESADR-PGLLVDLVKIIADINITVQSG 265 +PP E VDV +IYD PE+ + E ++ P LVK AD+N T+Q G Sbjct: 264 DPPLEAVDVR-----QIYDKFPEKKGGLKELYEKGPPNAFFLVKFWADLNSTIQEG 314
>TEAD3_HUMAN (Q99594) Transcriptional enhancer factor TEF-5 (TEA domain family| member 3) (TEAD-3) (DTEF-1) Length = 435 Score = 32.0 bits (71), Expect = 1.3 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -3 Query: 429 EPPTEVVDVDIATHIEIYDDGPERSLLVVESADR-PGLLVDLVKIIADINITVQSG 265 +PP E VDV +IYD PE+ + E ++ P LVK AD+N T+Q G Sbjct: 260 DPPLEAVDVR-----QIYDKFPEKKGGLKELYEKGPPNAFFLVKFWADLNSTIQEG 310
>GLND_PSEU2 (Q4ZWT0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 898 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -3 Query: 423 PTEVVDVDIATHIEIYDDGPERSLLVVE--SADRPGLLVDLVKIIADINITVQSGEFDTE 250 P ++ A + I++D +R + V+E + DRPGLL + KI + ++++Q+ + T Sbjct: 791 PRQLKHFAFAPQVTIHNDA-QRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATL 849 Query: 249 GLLAKAKFHVS 217 G + F ++ Sbjct: 850 GERVEDVFFIT 860
>GLND_PSESM (Q886P5) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 898 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -3 Query: 423 PTEVVDVDIATHIEIYDDGPERSLLVVE--SADRPGLLVDLVKIIADINITVQSGEFDTE 250 P ++ A + I++D +R + V+E + DRPGLL + KI + ++++Q+ + T Sbjct: 791 PRQLKHFAFAPQVTIHNDA-QRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATL 849 Query: 249 GLLAKAKFHVS 217 G + F ++ Sbjct: 850 GERVEDVFFIT 860
>GLND_PSE14 (Q48F57) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 898 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -3 Query: 423 PTEVVDVDIATHIEIYDDGPERSLLVVE--SADRPGLLVDLVKIIADINITVQSGEFDTE 250 P ++ A + I++D +R + V+E + DRPGLL + KI + ++++Q+ + T Sbjct: 791 PRQLKHFAFAPQVTIHNDA-QRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATL 849 Query: 249 GLLAKAKFHVS 217 G + F ++ Sbjct: 850 GERVEDVFFIT 860
>EFTU_BUCBP (P59506) Elongation factor Tu (EF-Tu)| Length = 394 Score = 31.6 bits (70), Expect = 1.7 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 4/79 (5%) Frame = -3 Query: 540 IDDPELLEAVRLTIINNMLEY-HPEASSQLAMGATFGL---EPPTEVVDVDIATHIEIYD 373 +DD ELLE V + + + + +Y P S+ + G+ +P E +D++ +++ Y Sbjct: 141 VDDEELLELVEMEVRDLLTQYDFPGDSTPIVRGSALKALEGDPQWEQKILDLSNYLDTYI 200 Query: 372 DGPERSLLVVESADRPGLL 316 P+RS+ D+P LL Sbjct: 201 PEPKRSI------DQPFLL 213
>ZN365_HUMAN (Q70YC5) Protein ZNF365| Length = 407 Score = 31.6 bits (70), Expect = 1.7 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%) Frame = +3 Query: 12 G*LQNISGNNLDDSSSFRQISCIMNYHKVWICNH--LPRNWHP 134 G ++++SG+ L D SS R+ C+ H +CNH L ++HP Sbjct: 299 GFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKSHFHP 341
>GLND_PSEPK (Q88MI2) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 900 Score = 31.6 bits (70), Expect = 1.7 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = -3 Query: 423 PTEVVDVDIATHIEIYDDGPER-SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 P ++ D + I +D ++L + + DRPGLL L +I + ++++Q+ + T G Sbjct: 792 PRQLKHFDFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLG 851 Query: 246 LLAKAKFHVS 217 + F ++ Sbjct: 852 ERVEDVFFIT 861
>GLND_PSEF5 (Q4KHH8) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 900 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -3 Query: 423 PTEVVDVDIATHIEIYDDGPERSLLVVE--SADRPGLLVDLVKIIADINITVQSGEFDTE 250 P ++ A + I++D +R + V+E + DRPGLL + KI + ++++Q+ + T Sbjct: 792 PRQLKHFAFAPEVTIHNDA-QRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATL 850 Query: 249 GLLAKAKFHVS 217 G + F ++ Sbjct: 851 GERVEDVFFIT 861
>UVRC_MYCBV (O84898) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 571 Score = 31.2 bits (69), Expect = 2.3 Identities = 18/61 (29%), Positives = 31/61 (50%) Frame = -3 Query: 366 PERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVSYRGKPLIKAL 187 PE ++L+++ P L V L+K IN++ + D++ F Y KP++K L Sbjct: 89 PEFNILLLDDRKYPYLKVQLLKDSLLINLSRKVNAKDSKNTFYYGPFPSGYGAKPILKLL 148 Query: 186 Q 184 Q Sbjct: 149 Q 149
>GLND_PHOPR (Q6LN22) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 874 Score = 31.2 bits (69), Expect = 2.3 Identities = 25/119 (21%), Positives = 56/119 (47%), Gaps = 2/119 (1%) Frame = -3 Query: 513 VRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIEIYDDGP-ERSLLVVES 337 +R ++N + + E ++ A P +++ ++ T ++ +++ + + + Sbjct: 757 IRRALVNALTKMKSERKNKRA---------PRKLMHFNVKTQVDFLPTKTGKKTTMELIA 807 Query: 336 ADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKF-HVSYRGKPLIKALQQVLANSL 163 D PGLL + + A +++Q+ + T G A+ F V+ G PL + QQ L +L Sbjct: 808 LDTPGLLARIGAVFAKQKVSLQAAKITTIGERAEDFFILVNEHGSPLTEEHQQALKEAL 866
>GLND_AZOVI (P36223) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 899 Score = 31.2 bits (69), Expect = 2.3 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = -3 Query: 423 PTEVVDVDIATHIEIYDDGPER-SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 P ++ A + I +D ++L + + DRPGLL + KI D ++++Q+ + T G Sbjct: 792 PRQLKHFAFAPQVTIQNDALRPVTILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLG 851 Query: 246 LLAKAKFHVS 217 + F V+ Sbjct: 852 ERVEDVFFVT 861
>GLND_GLUOX (Q5FPT6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 949 Score = 31.2 bits (69), Expect = 2.3 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -3 Query: 357 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHV 220 +++ V DRPGLL D+ ++ ++ + S T G+ A F+V Sbjct: 869 TVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYV 914
>GLND_BURS3 (Q39F41) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 858 Score = 30.8 bits (68), Expect = 3.0 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = -3 Query: 375 DDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 D+ + +L V + DRPGLL + +++A+ I V + +T G Sbjct: 783 DERGQYYILSVSANDRPGLLYSIARVLAEHRIGVHAARINTLG 825
>EFTU_BORBU (P50062) Elongation factor Tu (EF-Tu)| Length = 394 Score = 30.8 bits (68), Expect = 3.0 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Frame = -3 Query: 534 DPELLEAVRLTIINNMLEYHPEASSQLAMGATFGL-----EPPTEVVDVDIATHIEIYDD 370 DPEL+E V + ++ + +Y A + + G+ FG +P + ++ ++ Y D Sbjct: 143 DPELVELVEVEVLELVEKYGFSADTPIIKGSAFGAMSNPEDPESTKCVKELLESMDNYFD 202 Query: 369 GPERSLLVVESADRPGLL 316 PER + D+P LL Sbjct: 203 LPERDI------DKPFLL 214
>GLND_BURPS (Q63T10) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 858 Score = 30.4 bits (67), Expect = 3.9 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = -3 Query: 375 DDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 D+ + +L V + DRPGLL + +++A+ + V + +T G Sbjct: 783 DERGQYYILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLG 825
>GLND_BURP1 (Q3JR26) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 858 Score = 30.4 bits (67), Expect = 3.9 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = -3 Query: 375 DDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 D+ + +L V + DRPGLL + +++A+ + V + +T G Sbjct: 783 DERGQYYILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLG 825
>GLND_BURMA (Q62JC2) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 858 Score = 30.4 bits (67), Expect = 3.9 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = -3 Query: 375 DDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 D+ + +L V + DRPGLL + +++A+ + V + +T G Sbjct: 783 DERGQYYILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLG 825
>EFTU_HAEDU (Q7TTF9) Elongation factor Tu (EF-Tu)| Length = 393 Score = 30.4 bits (67), Expect = 3.9 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Frame = -3 Query: 540 IDDPELLEAVRLTIINNMLEYH-PEASSQLAMGATFGL---EPPTEVVDVDIATHIEIYD 373 +DD ELLE V + + + +Y P + + G+ P E +++A H++ Y Sbjct: 140 VDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALQALNGVPEWEEKIIELAQHLDSYI 199 Query: 372 DGPERSLLVVESADRPGLL 316 PER++ D+P LL Sbjct: 200 PEPERAI------DKPFLL 212
>GLND_VIBPA (Q87MD6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 874 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -3 Query: 423 PTEVVDVDIATHIEIYDD-GPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 P ++ ++ T ++ G + +L+ + D PGLL + + AD+NI + + T G Sbjct: 776 PNKLQHFNVKTKVDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIG 835 Query: 246 LLAKAKF 226 A+ F Sbjct: 836 ERAEDLF 842
>CLPB_PHOPR (Q6LMY0) Chaperone clpB| Length = 857 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = -3 Query: 291 DINITVQSGEFDTEGLLAKAKFHVSYRGKPLIKALQQVLANSL 163 D +TVQ D +AKA F Y +PL +A+QQ + N L Sbjct: 790 DYELTVQESALD---FVAKAGFDPVYGARPLKRAIQQYIENPL 829
>GLND_ERWCT (Q6D8E5) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 904 Score = 30.0 bits (66), Expect = 5.0 Identities = 12/38 (31%), Positives = 23/38 (60%) Frame = -3 Query: 360 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 RS + + + D+PGLL + +I +D+N+++ T G Sbjct: 825 RSYMELSALDQPGLLARIGEIFSDLNLSLHGARISTIG 862
>ZN365_PONPY (Q5R9L2) Protein ZNF365| Length = 407 Score = 30.0 bits (66), Expect = 5.0 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Frame = +3 Query: 24 NISGNNLDDSSSFRQISCIMNYHKVWICNH--LPRNWHP 134 ++SG+ L D SS R+ C+ H +CNH L ++HP Sbjct: 303 DLSGHVLTDISSNRKPKCLSRGHPHSVCNHSDLKAHFHP 341
>HLYB_ECO57 (Q46717) Alpha-hemolysin translocation ATP-binding protein hlyB| (EHEC-hlyB protein) Length = 706 Score = 30.0 bits (66), Expect = 5.0 Identities = 11/21 (52%), Positives = 17/21 (80%) Frame = -1 Query: 149 GGRRQRMPVSRQMVTNPHFMI 87 GG+RQR+ ++R +VTNP +I Sbjct: 608 GGQRQRIAIARALVTNPRILI 628
>LON2_MYXXA (P36774) ATP-dependent protease La 2 (EC 3.4.21.53)| Length = 826 Score = 30.0 bits (66), Expect = 5.0 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = -3 Query: 387 IEIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAK 229 IE+ + P + +VES PG L DL+ D+ I + +T L A+ K Sbjct: 164 IELMPELPAAATELVESITHPGHLADLIAANVDVPIEEKQAVLETVDLKARMK 216
>GLND_COLP3 (Q485H4) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 878 Score = 30.0 bits (66), Expect = 5.0 Identities = 13/48 (27%), Positives = 27/48 (56%) Frame = -3 Query: 360 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 R+++ + + DRPGLL ++ ++ + + + S + T G A F +S Sbjct: 807 RTMIEIIALDRPGLLSNISQVFLEARVNIHSAKITTFGEKADDVFTIS 854
>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 251 Score = 29.6 bits (65), Expect = 6.6 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Frame = -3 Query: 537 DDPELLEAVRLTIINNMLEYHP--EASSQLAMGATF-GLEP-PTEVVDVDIATHIEIYDD 370 D P L+EA R ++E H E ++ LA GA G+ ++VD+ T E+ + Sbjct: 142 DLPALVEAARDRGFQPLVEVHTREELTAALAAGADIVGINNRDLGKLEVDLGTFEELAPE 201 Query: 369 GPERSLLVVES 337 PE LLV ES Sbjct: 202 APEDVLLVAES 212
>PCDBE_PANTR (Q5DRD5) Protocadherin beta 14 precursor (PCDH-beta14)| Length = 798 Score = 29.6 bits (65), Expect = 6.6 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Frame = -3 Query: 555 STGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIEIY 376 S+ RKI PEL +++ L+Y EA +L + A G PP + + ++I Sbjct: 185 SSDRKIY-PEL-------VLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDIN 236 Query: 375 DDGPE--RSLLVVE-SADRP 325 D+ PE +SL V+ DRP Sbjct: 237 DNAPEFPQSLYEVQVPEDRP 256
>PCDBE_HUMAN (Q9Y5E9) Protocadherin beta 14 precursor (PCDH-beta14)| Length = 798 Score = 29.6 bits (65), Expect = 6.6 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Frame = -3 Query: 555 STGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIEIY 376 S+ RKI PEL +++ L+Y EA +L + A G PP + + ++I Sbjct: 185 SSDRKIY-PEL-------VLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDIN 236 Query: 375 DDGPE--RSLLVVE-SADRP 325 D+ PE +SL V+ DRP Sbjct: 237 DNAPEFPQSLYEVQVPEDRP 256
>RPOB_DEHSC (Q3ZX01) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1273 Score = 29.6 bits (65), Expect = 6.6 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = -3 Query: 408 DVDIATHIEIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGE 262 D+DI E+ D+ PER + S DR L+ D + + DI ++ G+ Sbjct: 209 DLDILNLFEVIDNDPERH-YIQSSIDRDPLIKDEISALIDIYSRLRPGD 256
>GLND_YERPS (Q667I7) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 893 Score = 29.6 bits (65), Expect = 6.6 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = -3 Query: 360 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 R+ L + + D+PGLL + KI AD+ +++ S T G Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIG 854
>GLND_YERPE (Q8ZH68) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 893 Score = 29.6 bits (65), Expect = 6.6 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = -3 Query: 360 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 R+ L + + D+PGLL + KI AD+ +++ S T G Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIG 854
>OPPF_STRP8 (Q8P2L5) Oligopeptide transport ATP-binding protein oppF| Length = 307 Score = 29.6 bits (65), Expect = 6.6 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = -1 Query: 149 GGRRQRMPVSRQMVTNPHFMIVHD 78 GG+RQR+ ++R +V NP F+I + Sbjct: 153 GGQRQRIGIARALVMNPEFVIADE 176
>OPPF_STRP6 (Q5XDU4) Oligopeptide transport ATP-binding protein oppF| Length = 307 Score = 29.6 bits (65), Expect = 6.6 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = -1 Query: 149 GGRRQRMPVSRQMVTNPHFMIVHD 78 GG+RQR+ ++R +V NP F+I + Sbjct: 153 GGQRQRIGIARALVMNPEFVIADE 176
>OPPF_STRP3 (P0A2V7) Oligopeptide transport ATP-binding protein oppF| Length = 307 Score = 29.6 bits (65), Expect = 6.6 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = -1 Query: 149 GGRRQRMPVSRQMVTNPHFMIVHD 78 GG+RQR+ ++R +V NP F+I + Sbjct: 153 GGQRQRIGIARALVMNPEFVIADE 176
>OPPF_STRP1 (P0A2V6) Oligopeptide transport ATP-binding protein oppF| Length = 307 Score = 29.6 bits (65), Expect = 6.6 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = -1 Query: 149 GGRRQRMPVSRQMVTNPHFMIVHD 78 GG+RQR+ ++R +V NP F+I + Sbjct: 153 GGQRQRIGIARALVMNPEFVIADE 176
>TRME_RALSO (Q8Y3H5) tRNA modification GTPase trmE| Length = 481 Score = 29.6 bits (65), Expect = 6.6 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 4/111 (3%) Frame = -3 Query: 522 LEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATH----IEIYDDGPERS 355 L+ + + +++E EA+++ A + G+ T V+ H +E D PE Sbjct: 143 LDLAQAEAVADLIEASTEAAARSAARSLDGVFSQTVHALVERVIHLRMLVEATLDFPEEE 202 Query: 354 LLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVSYRGKP 202 + +E+AD G L D+ + + + G EGL HV G+P Sbjct: 203 IDFLEAADARGQLADIRARLDGVLAQARQGALLREGL------HVVLAGQP 247
>RPOB_DEHE1 (Q3Z8V4) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1272 Score = 29.6 bits (65), Expect = 6.6 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = -3 Query: 408 DVDIATHIEIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGE 262 D+DI E+ D+ PER + S DR L+ D + + DI ++ G+ Sbjct: 209 DLDILNLFEVIDNDPERH-YIQSSIDRDPLIKDEISALIDIYSRLRPGD 256
>GLND_RHIME (P56884) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 949 Score = 29.6 bits (65), Expect = 6.6 Identities = 13/47 (27%), Positives = 27/47 (57%) Frame = -3 Query: 357 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 +++ VE DR GLL ++ +++D+++ + S T G F+V+ Sbjct: 844 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
>GLND_IDILO (Q5QXT0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 879 Score = 29.3 bits (64), Expect = 8.6 Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 1/112 (0%) Frame = -3 Query: 549 GRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATF-GLEPPTEVVDVDIATHIEIYD 373 G+ + +P +E V+ +++ + + P S++ + TEV + H Sbjct: 751 GKPLTEPHRIEEVKQQLLDVLHKRIPVPSTKRPLSRRMKNFSVATEVTFIPSKHH----- 805 Query: 372 DGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 217 R+ + + DRPGL+ L I+ N+ + + + T G A+ F V+ Sbjct: 806 ---GRTTFELVTLDRPGLIAKLAAILQQQNVILLAAKITTIGEQAEDLFIVT 854
>WAPA_BACSU (Q07833) Wall-associated protein precursor| Length = 2334 Score = 29.3 bits (64), Expect = 8.6 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -3 Query: 312 DLVKIIADINITVQSGEFDTEGLLAKAKFHVSYRGKPLIKALQ 184 DL+K + D + TV S ++D+EG L K S KP+ Q Sbjct: 1077 DLLKKVTDTDGTVTSYDYDSEGRLVKQYSANSTEAKPVFTEYQ 1119
>GLND_ZYMMO (Q5NPH0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 926 Score = 29.3 bits (64), Expect = 8.6 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 5/122 (4%) Frame = -3 Query: 567 ITKSSTGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATH 388 + ++S G I E L + + I + H +S++LA L PP + A H Sbjct: 781 LVQNSQGGMIKSGEHLNRM-MQAIEDAATSHIRSSNKLA-----ALRPP--LFWRGKAFH 832 Query: 387 IE----IYDDGPER-SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFH 223 +E I + +R +++ V + DRP LL DL + + +T+ S T G A F+ Sbjct: 833 VEPLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFY 892 Query: 222 VS 217 VS Sbjct: 893 VS 894
>GLND_SHISS (Q3Z5J1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 890 Score = 29.3 bits (64), Expect = 8.6 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -3 Query: 360 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 +S L + + D+PGLL + KI AD+ I++ T G Sbjct: 814 KSFLELIALDQPGLLARVGKIFADLGISLHGARITTIG 851
>GLND_SHIFL (Q83MD4) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 890 Score = 29.3 bits (64), Expect = 8.6 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -3 Query: 360 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 +S L + + D+PGLL + KI AD+ I++ T G Sbjct: 814 KSFLELIALDQPGLLARVGKIFADLGISLHGARITTIG 851
>GLND_SHIBS (Q325X3) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 890 Score = 29.3 bits (64), Expect = 8.6 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -3 Query: 360 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 +S L + + D+PGLL + KI AD+ I++ T G Sbjct: 814 KSFLELIALDQPGLLARVGKIFADLGISLHGARITTIG 851
>GLND_ECOLI (P27249) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 890 Score = 29.3 bits (64), Expect = 8.6 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -3 Query: 360 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 +S L + + D+PGLL + KI AD+ I++ T G Sbjct: 814 KSFLELIALDQPGLLARVGKIFADLGISLHGARITTIG 851
>GLND_ECOL6 (Q8CY19) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 890 Score = 29.3 bits (64), Expect = 8.6 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -3 Query: 360 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 +S L + + D+PGLL + KI AD+ I++ T G Sbjct: 814 KSFLELIALDQPGLLARVGKIFADLGISLHGARITTIG 851
>GLND_ECO57 (Q8X8Y6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 890 Score = 29.3 bits (64), Expect = 8.6 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -3 Query: 360 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 247 +S L + + D+PGLL + KI AD+ I++ T G Sbjct: 814 KSFLELIALDQPGLLARVGKIFADLGISLHGARITTIG 851 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,306,845 Number of Sequences: 219361 Number of extensions: 1542698 Number of successful extensions: 4254 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 4124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4252 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)