Clone Information

BLAST Search Result

Clone Name	rbaak4j03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL44_ARATH (O23290) 60S ribosomal protein L44	153	4e-37
2	RL44_GOSHI (Q96499) 60S ribosomal protein L44	148	1e-35
3	RL44_CRYNE (Q9HF88) 60S ribosomal protein L44 (60S ribosomal pro...	127	2e-29
4	RL44_PHARH (O59870) 60S ribosomal protein L44 (60S ribosomal pro...	126	4e-29
5	RL44_COPCI (Q9UWE4) 60S ribosomal protein L44 (60S ribosomal pro...	125	1e-28
6	RL44_PICJA (P52809) 60S ribosomal protein L44 (60S ribosomal pro...	122	9e-28
7	RL44P_CANMA (Q00477) 60S ribosomal protein L44 P (L41) (L41 P-type)	121	2e-27
8	RL44_SCHPO (Q9UTI8) 60S ribosomal protein L44	120	3e-27
9	RL44_PICCI (Q9UVB8) 60S ribosomal protein L44 (60S ribosomal pro...	119	5e-27
10	RL44_KLUMA (P27076) 60S ribosomal protein L44 (60S ribosomal pro...	118	1e-26
11	RL44_KLULA (P31027) 60S ribosomal protein L44 (60S ribosomal pro...	118	1e-26
12	RL44_YEAST (P02405) 60S ribosomal protein L42 (L44) (YL27) (YP44...	118	1e-26
13	RL44_PICGU (P31866) 60S ribosomal protein L44 (60S ribosomal pro...	117	2e-26
14	RL44_CHLRE (P49213) 60S ribosomal protein L44 (L41)	117	3e-26
15	RL44_DEBOC (P31028) 60S ribosomal protein L44 (L41)	116	4e-26
16	RL36A_RAT (P83883) 60S ribosomal protein L36a (60S ribosomal pro...	116	4e-26
17	RL36A_PIG (P83884) 60S ribosomal protein L36a (60S ribosomal pro...	116	4e-26
18	RL36A_MOUSE (P83882) 60S ribosomal protein L36a (60S ribosomal p...	116	4e-26
19	RL36A_ICTPU (P61487) 60S ribosomal protein L36a	116	4e-26
20	RL36A_HUMAN (P83881) 60S ribosomal protein L36a (60S ribosomal p...	116	4e-26
21	RL36A_FUGRU (P61486) 60S ribosomal protein L36a (60S ribosomal p...	116	4e-26
22	RL36A_BRARE (P61485) 60S ribosomal protein L36a	116	4e-26
23	RL44_CAEEL (P48166) 60S ribosomal protein L44 (L41)	116	5e-26
24	RL36L_HUMAN (Q969Q0) 60S ribosomal protein L36a-like	115	9e-26
25	RL44Q_CANMA (P27074) 60S ribosomal protein L44 Q (L41) (L41 Q-type)	114	2e-25
26	RL36L_PONPY (Q5R9D2) 60S ribosomal protein L36a-like	114	2e-25
27	RL44_CANTR (P27075) 60S ribosomal protein L44 (60S ribosomal pro...	113	3e-25
28	RL44_BRUMA (P90702) 60S ribosomal protein L44	111	1e-24
29	RL44_AEDTR (Q9NB33) 60S ribosomal protein L44	110	4e-24
30	RL44_PLAF7 (O97231) 60S ribosomal protein L44	102	7e-22
31	RL44_TRYBB (P17843) 60S ribosomal protein L44	100	4e-21
32	RL44_THEAC (Q9HIX1) 50S ribosomal protein L44E	44	2e-04
33	RL44_PYRFU (Q8U475) 50S ribosomal protein L44E	36	0.066
34	RL44_PYRAB (Q9UXZ2) 50S ribosomal protein L44E	35	0.11
35	RL44_AERPE (Q9YF00) 50S ribosomal protein L44E	35	0.19
36	RL44_METJA (P54027) 50S ribosomal protein L44E	33	0.43
37	RL44_PYRHO (O59603) 50S ribosomal protein L44E	33	0.73
38	IF4E2_ARATH (O04663) Eukaryotic translation initiation factor 4E...	32	0.95
39	RL44_METTH (O27365) 50S ribosomal protein L44E	30	6.1
40	RNZ2_RAT (Q8CGS5) Zinc phosphodiesterase ELAC protein 2 (EC 3.1....	29	8.0
41	UNC18_CAEEL (P34815) Putative acetylcholine regulator unc-18 (Un...	29	8.0

>RL44_ARATH (O23290) 60S ribosomal protein L44|
          Length = 104

 Score =  153 bits (386), Expect = 4e-37
 Identities = 72/83 (86%), Positives = 75/83 (90%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFH       KIVL+LQCQSCKH+SQ
Sbjct: 22  HKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHFSQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSLF 264
           R IKRCKHFEIGGDKKGKGTSLF
Sbjct: 82  RPIKRCKHFEIGGDKKGKGTSLF 104

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>RL44_GOSHI (Q96499) 60S ribosomal protein L44|
          Length = 104

 Score =  148 bits (373), Expect = 1e-35
 Identities = 70/83 (84%), Positives = 72/83 (86%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFH       KIVL+LQCQ CKH SQ
Sbjct: 22  HKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSLF 264
             IKRCKHFEIGGDKKGKGTSLF
Sbjct: 82  HPIKRCKHFEIGGDKKGKGTSLF 104

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>RL44_CRYNE (Q9HF88) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  127 bits (320), Expect = 2e-29
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH       K+VL+L+C  CK   Q
Sbjct: 22  HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKTKHQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
            A+KRCKHFE+GGDKK +G ++
Sbjct: 82  LALKRCKHFELGGDKKQRGAAI 103

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>RL44_PHARH (O59870) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  126 bits (317), Expect = 4e-29
 Identities = 57/82 (69%), Positives = 66/82 (80%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFH       K+VL+L+C  CK+  Q
Sbjct: 22  HKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECSVCKYKMQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
             +KRCKHFE+GGDKK KG ++
Sbjct: 82  MTLKRCKHFELGGDKKTKGAAI 103

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>RL44_COPCI (Q9UWE4) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  125 bits (313), Expect = 1e-28
 Identities = 57/82 (69%), Positives = 67/82 (81%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFH       K+VL+L+C  CK+  Q
Sbjct: 22  HKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
            ++KRCKHFE+GG+KK KG +L
Sbjct: 82  VSLKRCKHFELGGEKKTKGAAL 103

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>RL44_PICJA (P52809) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  122 bits (305), Expect = 9e-28
 Identities = 58/82 (70%), Positives = 65/82 (79%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH       K+VL+L+C  CK  +Q
Sbjct: 22  HKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
            A+KRCKHFE+GGDKK KG +L
Sbjct: 82  LALKRCKHFELGGDKKQKGQAL 103

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>RL44P_CANMA (Q00477) 60S ribosomal protein L44 P (L41) (L41 P-type)|
          Length = 105

 Score =  121 bits (303), Expect = 2e-27
 Identities = 57/82 (69%), Positives = 65/82 (79%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFH       K+VL+L+C  CK  +Q
Sbjct: 22  HKVTQYKAGKSSLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
            A+KRCKHFE+GGDKK KG +L
Sbjct: 82  LALKRCKHFELGGDKKQKGQAL 103

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>RL44_SCHPO (Q9UTI8) 60S ribosomal protein L44|
          Length = 105

 Score =  120 bits (300), Expect = 3e-27
 Identities = 54/82 (65%), Positives = 66/82 (80%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           H+VTQYKKG DS  AQGKRRYDRKQSG+GGQTKPVFH       K+VL+L+C SCK+ +Q
Sbjct: 22  HRVTQYKKGPDSKLAQGKRRYDRKQSGFGGQTKPVFHKKAKVTKKVVLRLECVSCKYKNQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
             +KRCKHFE+GG+KK KG ++
Sbjct: 82  LVLKRCKHFELGGEKKTKGAAI 103

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>RL44_PICCI (Q9UVB8) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  119 bits (299), Expect = 5e-27
 Identities = 56/82 (68%), Positives = 65/82 (79%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH       K+VL+L+C  CK  +Q
Sbjct: 22  HKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
            ++KRCKHFE+GGD+K KG +L
Sbjct: 82  LSLKRCKHFELGGDRKQKGQAL 103

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>RL44_KLUMA (P27076) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  118 bits (296), Expect = 1e-26
 Identities = 55/82 (67%), Positives = 65/82 (79%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYK GK SL AQGKRRYDRKQSG+GGQTK +FH       K+VL+L+C SCK  +Q
Sbjct: 22  HKVTQYKAGKASLYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
            A+KRCKHFE+GG+KK KG +L
Sbjct: 82  LALKRCKHFELGGEKKQKGQAL 103

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>RL44_KLULA (P31027) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  118 bits (296), Expect = 1e-26
 Identities = 55/82 (67%), Positives = 65/82 (79%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYK GK SL AQGKRRYDRKQSG+GGQTK +FH       K+VL+L+C SCK  +Q
Sbjct: 22  HKVTQYKAGKASLYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
            A+KRCKHFE+GG+KK KG +L
Sbjct: 82  LALKRCKHFELGGEKKQKGQAL 103

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>RL44_YEAST (P02405) 60S ribosomal protein L42 (L44) (YL27) (YP44) (L41)|
           (Maintenance of killer protein 18)
          Length = 105

 Score =  118 bits (295), Expect = 1e-26
 Identities = 55/82 (67%), Positives = 64/82 (78%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFH       K+VL+L+C  CK  +Q
Sbjct: 22  HKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVKCKTRAQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
             +KRCKHFE+GG+KK KG +L
Sbjct: 82  LTLKRCKHFELGGEKKQKGQAL 103

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>RL44_PICGU (P31866) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 102

 Score =  117 bits (294), Expect = 2e-26
 Identities = 55/79 (69%), Positives = 63/79 (79%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFH       K+VL+L+C  CK  +Q
Sbjct: 22  HKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQ 81

Query: 332 RAIKRCKHFEIGGDKKGKG 276
            ++KRCKHFE+GGDKK KG
Sbjct: 82  LSLKRCKHFELGGDKKQKG 100

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>RL44_CHLRE (P49213) 60S ribosomal protein L44 (L41)|
          Length = 98

 Score =  117 bits (292), Expect = 3e-26
 Identities = 55/75 (73%), Positives = 59/75 (78%)
 Frame = -2

Query: 509 KVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQR 330
           KVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH       KIVL++QCQ CK    +
Sbjct: 21  KVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRMQCQECKQTCMK 80

Query: 329 AIKRCKHFEIGGDKK 285
            +KRCKHFEIGGDKK
Sbjct: 81  GLKRCKHFEIGGDKK 95

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>RL44_DEBOC (P31028) 60S ribosomal protein L44 (L41)|
          Length = 105

 Score =  116 bits (291), Expect = 4e-26
 Identities = 55/82 (67%), Positives = 63/82 (76%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYK GK SL AQGKRRYDRKQ GYGGQTK +FH       K+VLKL+C  CK  +Q
Sbjct: 22  HKVTQYKAGKASLFAQGKRRYDRKQRGYGGQTKQIFHKKAKTTKKVVLKLECVVCKTKAQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
            ++KRCKHFE+GGDKK KG +L
Sbjct: 82  LSLKRCKHFELGGDKKQKGQAL 103

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>RL36A_RAT (P83883) 60S ribosomal protein L36a (60S ribosomal protein L44)|
          Length = 105

 Score =  116 bits (291), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSCKHY 339
           HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F        KIVL+L+C   +C+  
Sbjct: 20  HKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSK 79

Query: 338 SQRAIKRCKHFEIGGDKKGKG 276
              AIKRCKHFE+GGDKK KG
Sbjct: 80  RMLAIKRCKHFELGGDKKRKG 100

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>RL36A_PIG (P83884) 60S ribosomal protein L36a (60S ribosomal protein L44)|
          Length = 105

 Score =  116 bits (291), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSCKHY 339
           HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F        KIVL+L+C   +C+  
Sbjct: 20  HKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSK 79

Query: 338 SQRAIKRCKHFEIGGDKKGKG 276
              AIKRCKHFE+GGDKK KG
Sbjct: 80  RMLAIKRCKHFELGGDKKRKG 100

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>RL36A_MOUSE (P83882) 60S ribosomal protein L36a (60S ribosomal protein L44)|
          Length = 105

 Score =  116 bits (291), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSCKHY 339
           HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F        KIVL+L+C   +C+  
Sbjct: 20  HKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSK 79

Query: 338 SQRAIKRCKHFEIGGDKKGKG 276
              AIKRCKHFE+GGDKK KG
Sbjct: 80  RMLAIKRCKHFELGGDKKRKG 100

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>RL36A_ICTPU (P61487) 60S ribosomal protein L36a|
          Length = 105

 Score =  116 bits (291), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSCKHY 339
           HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F        KIVL+L+C   +C+  
Sbjct: 20  HKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSK 79

Query: 338 SQRAIKRCKHFEIGGDKKGKG 276
              AIKRCKHFE+GGDKK KG
Sbjct: 80  RMLAIKRCKHFELGGDKKRKG 100

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>RL36A_HUMAN (P83881) 60S ribosomal protein L36a (60S ribosomal protein L44)|
           (Migration-inducing gene 6 protein)
          Length = 105

 Score =  116 bits (291), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSCKHY 339
           HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F        KIVL+L+C   +C+  
Sbjct: 20  HKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSK 79

Query: 338 SQRAIKRCKHFEIGGDKKGKG 276
              AIKRCKHFE+GGDKK KG
Sbjct: 80  RMLAIKRCKHFELGGDKKRKG 100

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>RL36A_FUGRU (P61486) 60S ribosomal protein L36a (60S ribosomal protein L44)|
          Length = 105

 Score =  116 bits (291), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSCKHY 339
           HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F        KIVL+L+C   +C+  
Sbjct: 20  HKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSK 79

Query: 338 SQRAIKRCKHFEIGGDKKGKG 276
              AIKRCKHFE+GGDKK KG
Sbjct: 80  RMLAIKRCKHFELGGDKKRKG 100

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>RL36A_BRARE (P61485) 60S ribosomal protein L36a|
          Length = 105

 Score =  116 bits (291), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSCKHY 339
           HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F        KIVL+L+C   +C+  
Sbjct: 20  HKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSK 79

Query: 338 SQRAIKRCKHFEIGGDKKGKG 276
              AIKRCKHFE+GGDKK KG
Sbjct: 80  RMLAIKRCKHFELGGDKKRKG 100

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>RL44_CAEEL (P48166) 60S ribosomal protein L44 (L41)|
          Length = 104

 Score =  116 bits (290), Expect = 5e-26
 Identities = 52/79 (65%), Positives = 61/79 (77%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYKKGK+S  AQG+RRYDRKQSG+GGQTKP+F        KIVL+++C  CKH  Q
Sbjct: 21  HKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQ 80

Query: 332 RAIKRCKHFEIGGDKKGKG 276
             IKRCKHFE+GG KK +G
Sbjct: 81  LPIKRCKHFELGGQKKSRG 99

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>RL36L_HUMAN (Q969Q0) 60S ribosomal protein L36a-like|
          Length = 105

 Score =  115 bits (288), Expect = 9e-26
 Identities = 56/81 (69%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSCKHY 339
           HKVTQYKKGKDSL AQG+RRYDRKQSGYGGQTKP+F        KIVL+L+C   +C+  
Sbjct: 20  HKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSK 79

Query: 338 SQRAIKRCKHFEIGGDKKGKG 276
              AIKRCKHFE+GGDKK KG
Sbjct: 80  RMLAIKRCKHFELGGDKKRKG 100

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>RL44Q_CANMA (P27074) 60S ribosomal protein L44 Q (L41) (L41 Q-type)|
          Length = 105

 Score =  114 bits (284), Expect = 2e-25
 Identities = 55/82 (67%), Positives = 61/82 (74%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYK G+ SL AQGKRRYDRKQSGYGGQTK VFH       KIVLKL+C  CK   Q
Sbjct: 22  HKVTQYKSGRASLFAQGKRRYDRKQSGYGGQTKQVFHKKAKTTKKIVLKLECTVCKTKKQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
             +KRCKH E+GG+KK KG +L
Sbjct: 82  LPLKRCKHIELGGEKKQKGQAL 103

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>RL36L_PONPY (Q5R9D2) 60S ribosomal protein L36a-like|
          Length = 105

 Score =  114 bits (284), Expect = 2e-25
 Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSCKHY 339
           HKVTQYKKGKDSL AQG+RRYDRK+SGYGGQTKP+F        KIVL+L+C   +C+  
Sbjct: 20  HKVTQYKKGKDSLYAQGRRRYDRKRSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSK 79

Query: 338 SQRAIKRCKHFEIGGDKKGKG 276
              AIKRCKHFE+GGDKK KG
Sbjct: 80  RMLAIKRCKHFELGGDKKRKG 100

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>RL44_CANTR (P27075) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  113 bits (283), Expect = 3e-25
 Identities = 55/82 (67%), Positives = 61/82 (74%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYK G+ SL AQGKRRYDRKQSGYGGQTK VFH       KIVLKL+C  CK   Q
Sbjct: 22  HKVTQYKAGRASLFAQGKRRYDRKQSGYGGQTKQVFHKKAKTTKKIVLKLECTVCKTKKQ 81

Query: 332 RAIKRCKHFEIGGDKKGKGTSL 267
             +KRCKH E+GG+KK KG +L
Sbjct: 82  LPLKRCKHIELGGEKKQKGQAL 103

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>RL44_BRUMA (P90702) 60S ribosomal protein L44|
          Length = 104

 Score =  111 bits (278), Expect = 1e-24
 Identities = 50/79 (63%), Positives = 59/79 (74%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYKKGK+S  AQG+RRYD KQ G+GGQTKP+F        KIVL+++C  CKH  Q
Sbjct: 21  HKVTQYKKGKESRLAQGRRRYDSKQKGFGGQTKPIFRKKAKTTKKIVLRMECTECKHRKQ 80

Query: 332 RAIKRCKHFEIGGDKKGKG 276
             IKRCKHFE+GG KK +G
Sbjct: 81  LPIKRCKHFELGGQKKTRG 99

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>RL44_AEDTR (Q9NB33) 60S ribosomal protein L44|
          Length = 103

 Score =  110 bits (274), Expect = 4e-24
 Identities = 48/79 (60%), Positives = 60/79 (75%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKVTQYKK K+  ++QG+RRYDRKQ G+GGQTKP+F        KIVL+++C  CK+  Q
Sbjct: 20  HKVTQYKKSKERKASQGRRRYDRKQKGFGGQTKPIFRKKAKTTKKIVLRMECVDCKYRKQ 79

Query: 332 RAIKRCKHFEIGGDKKGKG 276
             +KRCKHFE+GGDKK KG
Sbjct: 80  TPLKRCKHFELGGDKKRKG 98

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>RL44_PLAF7 (O97231) 60S ribosomal protein L44|
          Length = 103

 Score =  102 bits (254), Expect = 7e-22
 Identities = 48/83 (57%), Positives = 60/83 (72%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           HKV+QYKKGK+ LS+ G+RRYD KQ G+GGQTKPVF        KIVLKL+C  CK    
Sbjct: 21  HKVSQYKKGKERLSSLGRRRYDMKQKGFGGQTKPVFKKKAKTTKKIVLKLECTKCKKKRF 80

Query: 332 RAIKRCKHFEIGGDKKGKGTSLF 264
           + +KRCK FE+G DKK KG +++
Sbjct: 81  QTMKRCKTFEMGADKKKKGGAVY 103

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>RL44_TRYBB (P17843) 60S ribosomal protein L44|
          Length = 105

 Score =  100 bits (248), Expect = 4e-21
 Identities = 48/75 (64%), Positives = 53/75 (70%)
 Frame = -2

Query: 509 KVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQR 330
           KV QYK GK  L A+GKRRYDRKQSGYGGQTKP+FH       KIVLKLQC +CK   Q 
Sbjct: 23  KVVQYKAGKARLYARGKRRYDRKQSGYGGQTKPIFHKKAKTTKKIVLKLQCSNCKSIIQN 82

Query: 329 AIKRCKHFEIGGDKK 285
            +KR KHFE+   KK
Sbjct: 83  VLKRTKHFELNDKKK 97

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>RL44_THEAC (Q9HIX1) 50S ribosomal protein L44E|
          Length = 93

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 26/71 (36%), Positives = 33/71 (46%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKHYSQ 333
           H V + +K K S    G+RR+ R  SGYGG  +P F        +I L+L C  C     
Sbjct: 20  HSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDECHKAIT 79

Query: 332 RAIKRCKHFEI 300
               R K FEI
Sbjct: 80  PPGIRAKKFEI 90

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>RL44_PYRFU (Q8U475) 50S ribosomal protein L44E|
          Length = 94

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSC-KHYS 336
           HKV + KK   S  + G+RR+ R   GYGG  +P          K+ L+ +C  C K ++
Sbjct: 20  HKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREKPVKKLDLRFRCTECGKAHT 79

Query: 335 QRAIKRCKHFEI 300
           +    R K FE+
Sbjct: 80  RGRGFRVKKFEL 91

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>RL44_PYRAB (Q9UXZ2) 50S ribosomal protein L44E|
          Length = 94

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSC-KHYS 336
           HKV + KK   S  + G+RR+ R   GYGG  +P          K+ L+ +C  C K ++
Sbjct: 20  HKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREKPVKKLDLRFRCTVCGKAHT 79

Query: 335 QRAIKRCKHFEI 300
           +    R K FE+
Sbjct: 80  RGRGFRVKKFEL 91

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>RL44_AERPE (Q9YF00) 50S ribosomal protein L44E|
          Length = 63

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = -2

Query: 470 AQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSC 348
           A G+RRY RKQ GYG Q +P          K VL + C  C
Sbjct: 2   ALGERRYRRKQEGYGSQRRPEQKRFAKVTKKQVLVITCTVC 42

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>RL44_METJA (P54027) 50S ribosomal protein L44E|
          Length = 94

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSC 348
           H V + KKGK S    G+R++ R  +GYGG  +P+         KI L+ +C  C
Sbjct: 20  HIVEKAKKGKPSELTWGQRQFRRVTAGYGGFPRPL-PDRSKPVKKIDLRFKCTEC 73

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>RL44_PYRHO (O59603) 50S ribosomal protein L44E|
          Length = 94

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSC-KHYS 336
           HKV + K+   S  + G+RR+ R   GYGG  +P          K+ L+  C  C + ++
Sbjct: 20  HKVERVKRRPRSELSAGQRRFRRVLKGYGGFPRPKPEGREKPVKKLDLRFVCTVCGRAHT 79

Query: 335 QRAIKRCKHFEI 300
           +    R K FE+
Sbjct: 80  RGKGFRVKRFEL 91

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>IF4E2_ARATH (O04663) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)|
           (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25
           kDa subunit) (eIF-(iso)4F p28 subunit) (eIF4Eiso
           protein) (eIF(iso)4E)
          Length = 198

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = +1

Query: 31  VVDTIAKQMLHSPWVITVVDTIAKQMLHSPWVITVVDTI---AKQMLHSPWVITRNLKII 201
           VV    K+ L   W+ T++  I +Q   +  +  VV ++   +KQ   S W  T++ + +
Sbjct: 106 VVTANRKEALDKGWLETLMALIGEQFDEADEICGVVASVRPQSKQDKLSLWTRTKSNEAV 165

Query: 202 HSSCGKFWHNILNIT 246
               GK W  IL++T
Sbjct: 166 LMGIGKKWKEILDVT 180

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>RL44_METTH (O27365) 50S ribosomal protein L44E|
          Length = 92

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = -2

Query: 512 HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSC 348
           H+V + K+ K S    G+R++ R  +GY G  +P+         K+ L+L+C+ C
Sbjct: 20  HEVLESKRRKASELKWGQRQFRRVTAGYRGYPRPL-PSGNKPVKKLDLRLKCKEC 73

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>RNZ2_RAT (Q8CGS5) Zinc phosphodiesterase ELAC protein 2 (EC 3.1.26.11)|
           (Ribonuclease Z 2) (RNase Z 2) (tRNase Z 2) (tRNA 3
           endonuclease 2) (ElaC homolog protein 2)
          Length = 827

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 190 LKIIHSSCGKFWHNILNITARSSS*KRDVPLPFLSPPISKCLHLLIARCE 339
           L+  H+ C +  H+I  I A+      +VP    SPP+ + + LL+  C+
Sbjct: 587 LQQYHNQCQEILHHISMIPAKCLQKGAEVP----SPPVERLISLLLETCD 632

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>UNC18_CAEEL (P34815) Putative acetylcholine regulator unc-18 (Uncoordinated|
           protein 18)
          Length = 591

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = +1

Query: 49  KQMLHSPWVITVVDTIAKQMLHSPWVITVVDTIAKQMLHSPWVITRNLKIIHSSCGKFWH 228
           KQ++    +  V+  + K    S W + +VDT+A +ML              SSC K  H
Sbjct: 4   KQIVGHKLLNDVIRPLKKGDGRSAWNVLIVDTLAMRML--------------SSCCKM-H 48

Query: 229 NIL--NITARSSS*KRDVPLPFL 291
           NI+   IT      KR  PLP L
Sbjct: 49  NIMEEGITIVEDLNKRREPLPTL 71


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,289,615
Number of Sequences: 219361
Number of extensions: 1726613
Number of successful extensions: 4829
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 4223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4805
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result