Clone Name | rbaak4j03 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_187105.2| Oryza sativa (japonica cultivar-group), mRNA Length = 701 Score = 389 bits (196), Expect = e-105 Identities = 284/312 (91%), Gaps = 1/312 (0%) Strand = Plus / Minus Query: 247 gcaagatcatcatcttagaagagagatgttcccttgcccttcttgtctccaccgatttca 306 |||| |||| ||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 408 gcaatatcagcatcttagaagagtgaagttcccttgcccttcttgtctccaccgatttca 349 Query: 307 aagtgcttgcacctcttgatagcacgttgtgagtagtgcttgcagctctggcactgcaac 366 |||||||||||||||||||| | | || |||||||||||||||||||||||||||| | Sbjct: 348 aagtgcttgcacctcttgatcgggtgctgagagtagtgcttgcagctctggcactgcagc 289 Query: 367 ttcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggcca 426 ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 288 ttcagaacgatcttctttgttgtcttggccttcttgtgaaaaacaggctttgtctgccca 229 Query: 427 ccatatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtcctta 486 |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 228 ccatatcctgactgcttgcggtcataacgacgcttcccctgagcagaaaggctatccttt 169 Query: 487 cccttcttatactgggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgca 546 || ||||| |||||||||||||||| | |||||||||||| |||| ||||||||||| || Sbjct: 168 cctttcttgtactgggtaaccttgt-gtagggtgtgcttcctgcattccttgttcttaca 110 Query: 547 gtaggtcttctt 558 ||| |||||||| Sbjct: 109 gtaagtcttctt 98
>dbj|AK121702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073H17, full insert sequence Length = 725 Score = 389 bits (196), Expect = e-105 Identities = 284/312 (91%), Gaps = 1/312 (0%) Strand = Plus / Minus Query: 247 gcaagatcatcatcttagaagagagatgttcccttgcccttcttgtctccaccgatttca 306 |||| |||| ||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 432 gcaatatcagcatcttagaagagtgaagttcccttgcccttcttgtctccaccgatttca 373 Query: 307 aagtgcttgcacctcttgatagcacgttgtgagtagtgcttgcagctctggcactgcaac 366 |||||||||||||||||||| | | || |||||||||||||||||||||||||||| | Sbjct: 372 aagtgcttgcacctcttgatcgggtgctgagagtagtgcttgcagctctggcactgcagc 313 Query: 367 ttcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggcca 426 ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 312 ttcagaacgatcttctttgttgtcttggccttcttgtgaaaaacaggctttgtctgccca 253 Query: 427 ccatatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtcctta 486 |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 252 ccatatcctgactgcttgcggtcataacgacgcttcccctgagcagaaaggctatccttt 193 Query: 487 cccttcttatactgggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgca 546 || ||||| |||||||||||||||| | |||||||||||| |||| ||||||||||| || Sbjct: 192 cctttcttgtactgggtaaccttgt-gtagggtgtgcttcctgcattccttgttcttaca 134 Query: 547 gtaggtcttctt 558 ||| |||||||| Sbjct: 133 gtaagtcttctt 122
>dbj|AK063789.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-E03, full insert sequence Length = 701 Score = 389 bits (196), Expect = e-105 Identities = 284/312 (91%), Gaps = 1/312 (0%) Strand = Plus / Minus Query: 247 gcaagatcatcatcttagaagagagatgttcccttgcccttcttgtctccaccgatttca 306 |||| |||| ||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 408 gcaatatcagcatcttagaagagtgaagttcccttgcccttcttgtctccaccgatttca 349 Query: 307 aagtgcttgcacctcttgatagcacgttgtgagtagtgcttgcagctctggcactgcaac 366 |||||||||||||||||||| | | || |||||||||||||||||||||||||||| | Sbjct: 348 aagtgcttgcacctcttgatcgggtgctgagagtagtgcttgcagctctggcactgcagc 289 Query: 367 ttcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggcca 426 ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 288 ttcagaacgatcttctttgttgtcttggccttcttgtgaaaaacaggctttgtctgccca 229 Query: 427 ccatatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtcctta 486 |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 228 ccatatcctgactgcttgcggtcataacgacgcttcccctgagcagaaaggctatccttt 169 Query: 487 cccttcttatactgggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgca 546 || ||||| |||||||||||||||| | |||||||||||| |||| ||||||||||| || Sbjct: 168 cctttcttgtactgggtaaccttgt-gtagggtgtgcttcctgcattccttgttcttaca 110 Query: 547 gtaggtcttctt 558 ||| |||||||| Sbjct: 109 gtaagtcttctt 98
>gb|AY106167.1| Zea mays PCO141571 mRNA sequence Length = 641 Score = 369 bits (186), Expect = 7e-99 Identities = 274/302 (90%), Gaps = 1/302 (0%) Strand = Plus / Minus Query: 260 cttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacc 319 ||||||| ||||| ||||||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 378 cttagaacagagaggttcccttgcctttcttgtcaccaccgatctcaaagtgcttgcacc 319 Query: 320 tcttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatct 379 ||||||| | |||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 318 tcttgatcgggtgttgagagtagtgcttgcagctctggcactgcagcttcagcacaatct 259 Query: 380 tctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagact 439 |||||||||| || ||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 258 tctttgttgtttttgccttcttgtggaaaacaggctttgtctgaccaccatatccagact 199 Query: 440 gcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatact 499 | ||||||||||| || |||||||| ||||| |||||||| |||||||| ||||| |||| Sbjct: 198 gtttgcggtcataacgtcgcttcccttgagctgaaaggctatccttacctttcttgtact 139 Query: 500 gggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttg 559 |||||||||||| | |||||||||||| |||| ||||||||||| ||||||||||||||| Sbjct: 138 gggtaaccttgt-gcagggtgtgcttcctgcattccttgttcttacagtaggtcttcttg 80 Query: 560 gt 561 || Sbjct: 79 gt 78
>gb|AY109380.1| Zea mays CL2281_1 mRNA sequence Length = 1446 Score = 351 bits (177), Expect = 2e-93 Identities = 274/305 (89%), Gaps = 1/305 (0%) Strand = Plus / Minus Query: 260 cttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacc 319 |||||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 811 cttagaagagagatgtgcccttgcccttcttgtctccaccaatctcaaaatgcttgcacc 752 Query: 320 tcttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatct 379 |||| || || | ||||||||| ||||||||||||||||||||| ||||| || || | Sbjct: 751 tcttaattgcgtgctgtgagtagggcttgcagctctggcactgcagcttcaatacgattt 692 Query: 380 tctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagact 439 |||| || |||||||||||||||||||| |||||||| ||||||||||||||||| |||| Sbjct: 691 tcttggtggtcttggccttcttgtggaagacaggcttggtctggccaccatatcctgact 632 Query: 440 gcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatact 499 ||||||||||||| || ||||| ||||| ||||| ||||| |||||||||||||| |||| Sbjct: 631 gcttgcggtcataacggcgctttccctgggcagacaggctatccttacccttcttgtact 572 Query: 500 gggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttg 559 | |||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 571 gagtaaccttgt-ggagagtgtgcttcttgcactctttgttcttgcagtaggtcttcttg 513 Query: 560 gtctt 564 ||||| Sbjct: 512 gtctt 508
>gb|BT016180.1| Zea mays clone Contig13 mRNA sequence Length = 640 Score = 343 bits (173), Expect = 4e-91 Identities = 267/297 (89%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 268 agagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctcttgata 327 |||||||| ||||||||||||||||||||||| || ||||| |||||||| |||||||| Sbjct: 400 agagatgtgcccttgcccttcttgtctccaccaatctcaaaatgcttgcatctcttgatg 341 Query: 328 gcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatcttctttgtt 387 || | ||||||||||||||||||||||||||||||| |||||| ||||||||||| || Sbjct: 340 gcgtgctgtgagtagtgcttgcagctctggcactgcagcttcagaacaatcttcttggtg 281 Query: 388 gtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcgg 447 |||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||| Sbjct: 280 gtcttggccttcttgtggaagacaggcttggtctgaccaccatatcctgactgcttgcgg 221 Query: 448 tcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaacc 507 ||||| || ||||| ||||| ||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 220 tcataacggcgctttccctgggcagacaggctatccttgcccttcttatactgagtcacc 161 Query: 508 ttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||| |||| ||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 160 ttgt-ggagtgtgtgcttcttgcactctttgttcttgcagtacgtcttcttggtctt 105
>dbj|AK069083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009C02, full insert sequence Length = 2173 Score = 325 bits (164), Expect = 9e-86 Identities = 270/304 (88%), Gaps = 1/304 (0%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 2015 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 1956 Query: 321 cttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatctt 380 |||||| | | || ||||| ||||||||||| ||||| |||| ||||||||||||||| Sbjct: 1955 cttgatggggtgctgggagtaatgcttgcagctttggcattgcagcttcagcacaatctt 1896 Query: 381 ctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagactg 440 ||| || || || ||||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 1895 cttggtggtttttgccttcttgtggaaaacaggcttggtctgaccaccatatcctgactg 1836 Query: 441 cttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatactg 500 ||| |||||||| || ||||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 1835 cttacggtcataacggcgctttccctgggcagacaggctgtccttacccttcttgtactg 1776 Query: 501 ggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttgg 560 || ||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1775 agtgaccttgt-gaagggtgtgcttcctgcactccttgttcttgcagtaggtcttcttgg 1717 Query: 561 tctt 564 |||| Sbjct: 1716 tctt 1713
>dbj|AK058924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-C01, full insert sequence Length = 676 Score = 297 bits (150), Expect = 2e-77 Identities = 256/290 (88%), Gaps = 1/290 (0%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 289 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 230 Query: 321 cttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatctt 380 |||||| | | || ||||| ||||||||||| ||||| |||| ||||||||||||||| Sbjct: 229 cttgatggggtgctgggagtaatgcttgcagctttggcattgcagcttcagcacaatctt 170 Query: 381 ctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagactg 440 ||| || || || ||||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 169 cttggtggtttttgccttcttgtggaaaacaggcttggtctgaccaccatatcctgactg 110 Query: 441 cttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatactg 500 ||| |||||||| || ||||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 109 cttacggtcataacggcgctttccctgggcagacaggctgtccttacccttcttgtactg 50 Query: 501 ggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtag 550 || ||||||| | |||||||||||| ||||||||||||||||||||||| Sbjct: 49 agtgaccttgt-gaagggtgtgcttcctgcactccttgttcttgcagtag 1
>gb|DQ019457.1| Lilium longiflorum clone LP07 ribosomal protein-like mRNA, partial sequence Length = 526 Score = 268 bits (135), Expect = 2e-68 Identities = 262/303 (86%), Gaps = 1/303 (0%) Strand = Plus / Minus Query: 262 tagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctc 321 |||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 374 tagaagagagatgttcccttccccttcttatctccaccgatctcaaaatgcttgcacctc 315 Query: 322 ttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatcttc 381 || || | |||||||| ||||| ||| |||||| |||| |||||||||||||||| Sbjct: 314 ttaatcgggtgttgtgagacatgcttacaggactggcattgcagcttcagcacaatcttc 255 Query: 382 tttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagactgc 441 ||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||| Sbjct: 254 tttgttgtcttggccttcttgtgaaaaacaggcttggtctgtccaccatagccagactgc 195 Query: 442 ttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatactgg 501 || | |||||| || |||||||| || || | || ||||| |||||||||||||||||| Sbjct: 194 ttcctgtcataccgccgcttcccttgcacacacagactgtctttacccttcttatactgg 135 Query: 502 gtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggt 561 |||||||| | | | |||||||||||||| |||||||||||||||| |||||||| || Sbjct: 134 gtaaccttat-gcaatgtgtgcttcttgcatgccttgttcttgcagtaagtcttctttgt 76 Query: 562 ctt 564 ||| Sbjct: 75 ctt 73
>dbj|D10406.1|RIC340 Oryza sativa mRNA for ribosomal protein L41 (340 gene), partial sequence Length = 444 Score = 258 bits (130), Expect = 2e-65 Identities = 200/222 (90%), Gaps = 1/222 (0%) Strand = Plus / Minus Query: 343 tgcttgcagctctggcactgcaacttcagcacaatcttctttgttgtcttggccttcttg 402 ||||||||||| ||||| |||| |||||||||||||||||| || || || ||||||||| Sbjct: 281 tgcttgcagctttggcattgcagcttcagcacaatcttcttggtggtttttgccttcttg 222 Query: 403 tggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagcgacgcttc 462 |||||||||||||| ||||| ||||||||||| |||||||| |||||||| || ||||| Sbjct: 221 tggaaaacaggcttggtctgaccaccatatcctgactgcttacggtcataacggcgcttt 162 Query: 463 ccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtgggagggtgtg 522 ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | |||||||| Sbjct: 161 ccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-gaagggtgtg 103 Query: 523 cttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 102 cttcctgcactccttgttcttgcagtaggtcttcttggtctt 61
>gb|AF398144.1|AF398144 Brassica rapa subsp. pekinensis 60S ribosomal protein L144 mRNA, partial cds Length = 518 Score = 256 bits (129), Expect = 7e-65 Identities = 262/305 (85%), Gaps = 1/305 (0%) Strand = Plus / Minus Query: 260 cttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacc 319 ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 361 cttagaaaagtgatgttcccttgcccttcttgtctccaccgatttcaaaatgcttgcacc 302 Query: 320 tcttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatct 379 ||||||| | | || ||| ||||||||||| | |||||||| | | ||| ||||||| Sbjct: 301 tcttgatcgagtgctgagagaagtgcttgcaggtttggcactgaagcctcaagacaatct 242 Query: 380 tctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagact 439 |||| || ||||| |||||||||||||| |||||||| ||||| |||||||| ||||| | Sbjct: 241 tcttcgtggtcttagccttcttgtggaagacaggcttggtctgaccaccataaccagatt 182 Query: 440 gcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatact 499 |||| |||||||| |||||||| || ||||||| ||| ||||| ||||||||||| || | Sbjct: 181 gcttacggtcataacgacgctttccttgagcagcaagactgtctttacccttcttgtatt 122 Query: 500 gggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttg 559 |||||||||||| | | ||| || |||||||| ||||||||||||||||| || ||||| Sbjct: 121 gggtaaccttgt-gcaaggtatgtttcttgcattccttgttcttgcagtaagttttcttt 63 Query: 560 gtctt 564 ||||| Sbjct: 62 gtctt 58
>ref|NM_117509.1| Arabidopsis thaliana structural constituent of ribosome AT4G14320 mRNA, complete cds Length = 533 Score = 244 bits (123), Expect = 3e-61 Identities = 256/299 (85%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 260 cttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacc 319 |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 398 cttaaaagagagatgttccctttcccttcttgtctccaccgatctcaaagtgcttgcacc 339 Query: 320 tcttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatct 379 |||| || | ||||| ||| | ||||||||||| ||||| || | | |||||||||||| Sbjct: 338 tcttaatcgggcgttgcgagaaatgcttgcagctttggcattgaagcctcagcacaatct 279 Query: 380 tctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagact 439 |||| |||||||| |||||||||||||| || ||||| ||||| || ||||| ||||| | Sbjct: 278 tcttagttgtcttagccttcttgtggaagacgggcttggtctgacctccataaccagatt 219 Query: 440 gcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatact 499 | || || ||||| |||||||| || || |||| |||||| || ||||| |||||||||| Sbjct: 218 gtttacgatcataacgacgctttccttgggcagcaaggctatctttacctttcttatact 159 Query: 500 gggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttctt 558 | || ||||||| | | ||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 158 gcgtcaccttgt-gcaaggtatgcttcttgcactccttgttcttgcagtaagtgttctt 101
>gb|AY081639.1| Arabidopsis thaliana ribosomal protein (Z97336.1) mRNA, complete cds Length = 371 Score = 244 bits (123), Expect = 3e-61 Identities = 256/299 (85%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 260 cttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacc 319 |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 319 cttaaaagagagatgttccctttcccttcttgtctccaccgatctcaaagtgcttgcacc 260 Query: 320 tcttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatct 379 |||| || | ||||| ||| | ||||||||||| ||||| || | | |||||||||||| Sbjct: 259 tcttaatcgggcgttgcgagaaatgcttgcagctttggcattgaagcctcagcacaatct 200 Query: 380 tctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagact 439 |||| |||||||| |||||||||||||| || ||||| ||||| || ||||| ||||| | Sbjct: 199 tcttagttgtcttagccttcttgtggaagacgggcttggtctgacctccataaccagatt 140 Query: 440 gcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatact 499 | || || ||||| |||||||| || || |||| |||||| || ||||| |||||||||| Sbjct: 139 gtttacgatcataacgacgctttccttgggcagcaaggctatctttacctttcttatact 80 Query: 500 gggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttctt 558 | || ||||||| | | ||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 79 gcgtcaccttgt-gcaaggtatgcttcttgcactccttgttcttgcagtaagtgttctt 22
>gb|AY065121.1| Arabidopsis thaliana ribosomal protein (Z97336.1) mRNA, complete cds Length = 494 Score = 244 bits (123), Expect = 3e-61 Identities = 256/299 (85%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 260 cttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacc 319 |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 373 cttaaaagagagatgttccctttcccttcttgtctccaccgatctcaaagtgcttgcacc 314 Query: 320 tcttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatct 379 |||| || | ||||| ||| | ||||||||||| ||||| || | | |||||||||||| Sbjct: 313 tcttaatcgggcgttgcgagaaatgcttgcagctttggcattgaagcctcagcacaatct 254 Query: 380 tctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagact 439 |||| |||||||| |||||||||||||| || ||||| ||||| || ||||| ||||| | Sbjct: 253 tcttagttgtcttagccttcttgtggaagacgggcttggtctgacctccataaccagatt 194 Query: 440 gcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatact 499 | || || ||||| |||||||| || || |||| |||||| || ||||| |||||||||| Sbjct: 193 gtttacgatcataacgacgctttccttgggcagcaaggctatctttacctttcttatact 134 Query: 500 gggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttctt 558 | || ||||||| | | ||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 133 gcgtcaccttgt-gcaaggtatgcttcttgcactccttgttcttgcagtaagtgttctt 76
>emb|BX829272.1|CNS0A2I0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL86ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 480 Score = 244 bits (123), Expect = 3e-61 Identities = 256/299 (85%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 260 cttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacc 319 |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 357 cttaaaagagagatgttccctttcccttcttgtctccaccgatctcaaagtgcttgcacc 298 Query: 320 tcttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatct 379 |||| || | ||||| ||| | ||||||||||| ||||| || | | |||||||||||| Sbjct: 297 tcttaatcgggcgttgcgagaaatgcttgcagctttggcattgaagcctcagcacaatct 238 Query: 380 tctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagact 439 |||| |||||||| |||||||||||||| || ||||| ||||| || ||||| ||||| | Sbjct: 237 tcttagttgtcttagccttcttgtggaagacgggcttggtctgacctccataaccagatt 178 Query: 440 gcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatact 499 | || || ||||| |||||||| || || |||| |||||| || ||||| |||||||||| Sbjct: 177 gtttacgatcataacgacgctttccttgggcagcaaggctatctttacctttcttatact 118 Query: 500 gggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttctt 558 | || ||||||| | | ||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 117 gcgtcaccttgt-gcaaggtatgcttcttgcactccttgttcttgcagtaagtgttctt 60
>gb|AY085784.1| Arabidopsis thaliana clone 18153 mRNA, complete sequence Length = 533 Score = 236 bits (119), Expect = 6e-59 Identities = 255/299 (85%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 260 cttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacc 319 |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 398 cttaaaagagagatgttccctttcccttcttgtctccaccgatctcaaagtgcttgcacc 339 Query: 320 tcttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatct 379 |||| || | ||||| ||| | ||||||||||| ||||| || | | |||||||||||| Sbjct: 338 tcttaatcgggcgttgcgagaaatgcttgcagctttggcattgaagcctcagcacaatct 279 Query: 380 tctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagact 439 |||| || ||||| |||||||||||||| || ||||| ||||| || ||||| ||||| | Sbjct: 278 tcttagtcgtcttagccttcttgtggaagacgggcttggtctgacctccataaccagatt 219 Query: 440 gcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatact 499 | || || ||||| |||||||| || || |||| |||||| || ||||| |||||||||| Sbjct: 218 gtttacgatcataacgacgctttccttgggcagcaaggctatctttacctttcttatact 159 Query: 500 gggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttctt 558 | || ||||||| | | ||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 158 gcgtcaccttgt-gcaaggtatgcttcttgcactccttgttcttgcagtaagtgttctt 101
>gb|AY497301.1| Phalaenopsis hybrid cultivar 60S ribosomal protein L44 (PL44-1) mRNA, complete cds Length = 708 Score = 212 bits (107), Expect = 9e-52 Identities = 252/299 (84%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 260 cttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacc 319 ||||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 479 cttagaacagagatgttcccttccccttcttgtctccaccaatctcaaagtgcttgcacc 420 Query: 320 tcttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatct 379 ||||||| || | || ||| |||||||||| ||||| || |||| |||||| ||||||| Sbjct: 419 tcttgatggcgtgctgagagaagtgcttgcaactctgacattgcagcttcagaacaatct 360 Query: 380 tctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagact 439 ||||||| || || ||||| ||||||||||| ||||| ||||| || ||||| ||||||| Sbjct: 359 tctttgtagtttttgcctttttgtggaaaactggcttggtctgtcccccataaccagact 300 Query: 440 gcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatact 499 |||| || ||||| || || || || |||||||| || || || ||||||||||| || | Sbjct: 299 gcttccgatcataacggcgttttccttgagcagagagactatctttacccttcttgtatt 240 Query: 500 gggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttctt 558 ||||||| |||| | || ||||||||| |||| | ||||||||||| ||||| ||||| Sbjct: 239 gggtaactttgt-gcagcgtgtgcttcctgcattgtttgttcttgcaataggttttctt 182
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 20257868 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgcttacggtcataac 20257809 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 20257808 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 20257750 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20257749 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 20257700 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 20251702 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgctttcggtcataac 20251643 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 20251642 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 20251584 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20251583 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 20251534 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 20239650 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgcttacggtcataac 20239591 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 20239590 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 20239532 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20239531 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 20239482 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 20233483 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgctttcggtcataac 20233424 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 20233423 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 20233365 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20233364 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 20233315 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 20221433 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgcttacggtcataac 20221374 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 20221373 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 20221315 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20221314 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 20221265 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 20215266 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgctttcggtcataac 20215207 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 20215206 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 20215148 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20215147 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 20215098 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 20208702 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgcttacggtcataac 20208643 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 20208642 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 20208584 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20208583 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 20208534 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 20204332 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgcttacggtcataac 20204273 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 20204272 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 20204214 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20204213 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 20204164 Score = 198 bits (100), Expect = 1e-47 Identities = 149/164 (90%), Gaps = 1/164 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||| | Sbjct: 15397173 ccttcttgtgaaaaacaggctttgtctgcccaccatatcctgactgcttgcggtcataac 15397114 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 ||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||| | Sbjct: 15397113 gacgcttcccctgagcagaaaggctatcctttcctttcttgtactgggtaaccttgt-gt 15397055 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttctt 558 |||||||||||| |||| ||||||||||| ||||| |||||||| Sbjct: 15397054 agggtgtgcttcctgcattccttgttcttacagtaagtcttctt 15397011 Score = 119 bits (60), Expect = 1e-23 Identities = 72/76 (94%) Strand = Plus / Minus Query: 247 gcaagatcatcatcttagaagagagatgttcccttgcccttcttgtctccaccgatttca 306 |||| |||| ||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 15397539 gcaatatcagcatcttagaagagtgaagttcccttgcccttcttgtctccaccgatttca 15397480 Query: 307 aagtgcttgcacctct 322 |||||||||||||||| Sbjct: 15397479 aagtgcttgcacctct 15397464 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctttgttgtcttggcc 396 |||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||| Sbjct: 15397344 gagtagtgcttgcagctctggcactgcagcttcagaacgatcttctttgttgtcttggcc 15397285 Query: 397 t 397 | Sbjct: 15397284 t 15397284 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 20209121 ttagaaaagagacgttcccttgcccttcttgtctccaccaatttcaaaatgcttgcacct 20209062 Query: 321 ct 322 || Sbjct: 20209061 ct 20209060 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 20258289 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 20258230 Query: 321 ct 322 || Sbjct: 20258229 ct 20258228 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 20252131 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 20252072 Query: 321 ct 322 || Sbjct: 20252071 ct 20252070 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| ||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| Sbjct: 20245561 ttagaaaagagacgttcccttgcccttcttgtctccaccaattttaaaatgcttgcacct 20245502 Query: 321 ct 322 || Sbjct: 20245501 ct 20245500 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 20240071 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 20240012 Query: 321 ct 322 || Sbjct: 20240011 ct 20240010 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 20233912 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 20233853 Query: 321 ct 322 || Sbjct: 20233852 ct 20233851 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| ||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| Sbjct: 20227344 ttagaaaagagacgttcccttgcccttcttgtctccaccaattttaaaatgcttgcacct 20227285 Query: 321 ct 322 || Sbjct: 20227284 ct 20227283 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 20221854 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 20221795 Query: 321 ct 322 || Sbjct: 20221794 ct 20221793 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 20215695 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 20215636 Query: 321 ct 322 || Sbjct: 20215635 ct 20215634 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 20204755 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 20204696 Query: 321 ct 322 || Sbjct: 20204695 ct 20204694 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 20258113 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 20258067 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 20245389 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 20245343 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 20239895 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 20239849 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 20227172 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 20227126 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 20221678 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 20221632 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 20208949 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 20208903 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| ||||||||| |||||||| Sbjct: 20251957 gagtaatgcttgcagctttggcattgcagcttcagcacgatcttctt 20251911 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| ||||||||| |||||||| Sbjct: 20233738 gagtaatgcttgcagctttggcattgcagcttcagcacgatcttctt 20233692 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| ||||||||| |||||||| Sbjct: 20215521 gagtaatgcttgcagctttggcattgcagcttcagcacgatcttctt 20215475 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| ||||||||| |||||||| Sbjct: 20204587 gagtaatgcttgcagctttggcattgcagcttcagcacgatcttctt 20204541
>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1372_D12 Length = 179898 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 160256 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgcttacggtcataac 160197 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 160196 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 160138 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 160137 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 160088 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 154090 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgctttcggtcataac 154031 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 154030 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 153972 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 153971 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 153922 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 142038 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgcttacggtcataac 141979 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 141978 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 141920 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 141919 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 141870 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 135871 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgctttcggtcataac 135812 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 135811 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 135753 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135752 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 135703 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 123821 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgcttacggtcataac 123762 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 123761 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 123703 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 123702 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 123653 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 117654 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgctttcggtcataac 117595 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 117594 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 117536 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 117535 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 117486 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 111090 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgcttacggtcataac 111031 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 111030 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 110972 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110971 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 110922 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 106720 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgcttacggtcataac 106661 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 106660 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 106602 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106601 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 106552 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 111509 ttagaaaagagacgttcccttgcccttcttgtctccaccaatttcaaaatgcttgcacct 111450 Query: 321 ct 322 || Sbjct: 111449 ct 111448 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 160677 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 160618 Query: 321 ct 322 || Sbjct: 160617 ct 160616 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 154519 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 154460 Query: 321 ct 322 || Sbjct: 154459 ct 154458 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| ||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| Sbjct: 147949 ttagaaaagagacgttcccttgcccttcttgtctccaccaattttaaaatgcttgcacct 147890 Query: 321 ct 322 || Sbjct: 147889 ct 147888 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 142459 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 142400 Query: 321 ct 322 || Sbjct: 142399 ct 142398 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 136300 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 136241 Query: 321 ct 322 || Sbjct: 136240 ct 136239 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| ||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| Sbjct: 129732 ttagaaaagagacgttcccttgcccttcttgtctccaccaattttaaaatgcttgcacct 129673 Query: 321 ct 322 || Sbjct: 129672 ct 129671 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 124242 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 124183 Query: 321 ct 322 || Sbjct: 124182 ct 124181 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 118083 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 118024 Query: 321 ct 322 || Sbjct: 118023 ct 118022 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 107143 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 107084 Query: 321 ct 322 || Sbjct: 107083 ct 107082 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 160501 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 160455 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 147777 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 147731 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 142283 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 142237 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 129560 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 129514 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 124066 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 124020 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 111337 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 111291 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| ||||||||| |||||||| Sbjct: 154345 gagtaatgcttgcagctttggcattgcagcttcagcacgatcttctt 154299 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| ||||||||| |||||||| Sbjct: 136126 gagtaatgcttgcagctttggcattgcagcttcagcacgatcttctt 136080 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| ||||||||| |||||||| Sbjct: 117909 gagtaatgcttgcagctttggcattgcagcttcagcacgatcttctt 117863 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| ||||||||| |||||||| Sbjct: 106975 gagtaatgcttgcagctttggcattgcagcttcagcacgatcttctt 106929
>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0052O11 Length = 106467 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 479 ccttcttgtggaaaacaggcttggtctgaccaccatatcctgactgcttacggtcataac 420 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 | ||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||| | Sbjct: 419 ggcgctttccctgggcagacaggctgtccttacccttcttgtactgagtgaccttgt-ga 361 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 360 agggtgtgcttcctgcactccttgttcttgcagtaggtcttcttggtctt 311 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 900 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 841 Query: 321 ct 322 || Sbjct: 840 ct 839 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctt 383 ||||| ||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 724 gagtaatgcttgcagctttggcattgcagcttcagcacaatcttctt 678
>ref|NM_113242.1| Arabidopsis thaliana structural constituent of ribosome AT3G23390 mRNA, complete cds Length = 536 Score = 208 bits (105), Expect = 1e-50 Identities = 250/297 (84%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 268 agagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctcttgata 327 |||||||||||||| ||||||||||| |||||||| || || |||||||||||||||||| Sbjct: 363 agagatgttccctttcccttcttgtcaccaccgatctcgaaatgcttgcacctcttgata 304 Query: 328 gcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatcttctttgtt 387 | ||| || || ||||||||||||| || ||||| | | ||| ||||||||||| || Sbjct: 303 ggacgctgcgaaaagtgcttgcagctttgacactgaagcctcaaaacaatcttcttcgtg 244 Query: 388 gtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcgg 447 ||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| || || ||| Sbjct: 243 gtcttagcctttttgtggaagacaggcttagtctgaccaccataaccagattgtttacgg 184 Query: 448 tcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaacc 507 ||||| |||||||| || ||||||| ||| ||||| ||||||||||| || ||||||||| Sbjct: 183 tcataacgacgctttccttgagcagcaagactgtctttacccttcttgtattgggtaacc 124 Query: 508 ttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 ||||| | | | ||||| ||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 123 ttgtgcaaag-tatgctttttgcattccttgttcttacagtaagtgttctttgtctt 68
>gb|AY062855.1| Arabidopsis thaliana 60S ribosomal protein L44-like (At3g23400; MLM24.12) mRNA, complete cds Length = 521 Score = 208 bits (105), Expect = 1e-50 Identities = 250/297 (84%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 268 agagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctcttgata 327 |||||||||||||| ||||||||||| |||||||| || || |||||||||||||||||| Sbjct: 361 agagatgttccctttcccttcttgtcaccaccgatctcgaaatgcttgcacctcttgata 302 Query: 328 gcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatcttctttgtt 387 | ||| || || ||||||||||||| || ||||| | | ||| ||||||||||| || Sbjct: 301 ggacgctgcgaaaagtgcttgcagctttgacactgaagcctcaaaacaatcttcttcgtg 242 Query: 388 gtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcgg 447 ||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| || || ||| Sbjct: 241 gtcttagcctttttgtggaagacaggcttagtctgaccaccataaccagattgtttacgg 182 Query: 448 tcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaacc 507 ||||| |||||||| || ||||||| ||| ||||| ||||||||||| || ||||||||| Sbjct: 181 tcataacgacgctttccttgagcagcaagactgtctttacccttcttgtattgggtaacc 122 Query: 508 ttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 ||||| | | | ||||| ||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 121 ttgtgcaaag-tatgctttttgcattccttgttcttacagtaagtgttctttgtctt 66
>gb|AY085174.1| Arabidopsis thaliana clone 13557 mRNA, complete sequence Length = 536 Score = 208 bits (105), Expect = 1e-50 Identities = 250/297 (84%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 268 agagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctcttgata 327 |||||||||||||| ||||||||||| |||||||| || || |||||||||||||||||| Sbjct: 363 agagatgttccctttcccttcttgtcaccaccgatctcgaaatgcttgcacctcttgata 304 Query: 328 gcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatcttctttgtt 387 | ||| || || ||||||||||||| || ||||| | | ||| ||||||||||| || Sbjct: 303 ggacgctgcgaaaagtgcttgcagctttgacactgaagcctcaaaacaatcttcttcgtg 244 Query: 388 gtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcgg 447 ||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| || || ||| Sbjct: 243 gtcttagcctttttgtggaagacaggcttagtctgaccaccataaccagattgtttacgg 184 Query: 448 tcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaacc 507 ||||| |||||||| || ||||||| ||| ||||| ||||||||||| || ||||||||| Sbjct: 183 tcataacgacgctttccttgagcagcaagactgtctttacccttcttgtattgggtaacc 124 Query: 508 ttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 ||||| | | | ||||| ||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 123 ttgtgcaaag-tatgctttttgcattccttgttcttacagtaagtgttctttgtctt 68
>gb|BT001193.1| Arabidopsis thaliana 60S ribosomal protein L44-like (At3g23400) mRNA, complete cds Length = 365 Score = 208 bits (105), Expect = 1e-50 Identities = 250/297 (84%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 268 agagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctcttgata 327 |||||||||||||| ||||||||||| |||||||| || || |||||||||||||||||| Sbjct: 311 agagatgttccctttcccttcttgtcaccaccgatctcgaaatgcttgcacctcttgata 252 Query: 328 gcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatcttctttgtt 387 | ||| || || ||||||||||||| || ||||| | | ||| ||||||||||| || Sbjct: 251 ggacgctgcgaaaagtgcttgcagctttgacactgaagcctcaaaacaatcttcttcgtg 192 Query: 388 gtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcgg 447 ||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| || || ||| Sbjct: 191 gtcttagcctttttgtggaagacaggcttagtctgaccaccataaccagattgtttacgg 132 Query: 448 tcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaacc 507 ||||| |||||||| || ||||||| ||| ||||| ||||||||||| || ||||||||| Sbjct: 131 tcataacgacgctttccttgagcagcaagactgtctttacccttcttgtattgggtaacc 72 Query: 508 ttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 ||||| | | | ||||| ||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 71 ttgtgcaaag-tatgctttttgcattccttgttcttacagtaagtgttctttgtctt 16
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 198 bits (100), Expect = 1e-47 Identities = 149/164 (90%), Gaps = 1/164 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||| | Sbjct: 104172 ccttcttgtgaaaaacaggctttgtctgcccaccatatcctgactgcttgcggtcataac 104113 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 ||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||| | Sbjct: 104112 gacgcttcccctgagcagaaaggctatcctttcctttcttgtactgggtaaccttgt-gt 104054 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttctt 558 |||||||||||| |||| ||||||||||| ||||| |||||||| Sbjct: 104053 agggtgtgcttcctgcattccttgttcttacagtaagtcttctt 104010 Score = 119 bits (60), Expect = 1e-23 Identities = 72/76 (94%) Strand = Plus / Minus Query: 247 gcaagatcatcatcttagaagagagatgttcccttgcccttcttgtctccaccgatttca 306 |||| |||| ||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 104538 gcaatatcagcatcttagaagagtgaagttcccttgcccttcttgtctccaccgatttca 104479 Query: 307 aagtgcttgcacctct 322 |||||||||||||||| Sbjct: 104478 aagtgcttgcacctct 104463 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 337 gagtagtgcttgcagctctggcactgcaacttcagcacaatcttctttgttgtcttggcc 396 |||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||| Sbjct: 104343 gagtagtgcttgcagctctggcactgcagcttcagaacgatcttctttgttgtcttggcc 104284 Query: 397 t 397 | Sbjct: 104283 t 104283
>gb|U64678.1|GHU64678 Gossypium hirsutum ribosomal protein L44 isoform b (RL44), complete cds Length = 542 Score = 196 bits (99), Expect = 6e-47 Identities = 253/303 (83%), Gaps = 1/303 (0%) Strand = Plus / Minus Query: 262 tagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctc 321 ||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 363 tagaaaagtgatgttcccttccccttcttgtctccaccaatttcaaagtgcttgcacctc 304 Query: 322 ttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatcttc 381 ||||| | | | |||||| ||||| || | |||||| |||| | | |||||||||||| Sbjct: 303 ttgatcggatgctgtgagacatgcttacaaccctggcattgcagccttagcacaatcttc 244 Query: 382 tttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagactgc 441 || || ||||| |||||||||||||| || || || ||||| |||||||| || || || Sbjct: 243 ttggtggtctttgccttcttgtggaagactggtttggtctgaccaccataacctgattgt 184 Query: 442 ttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatactgg 501 ||||| || || || |||||||| ||||||| | || |||||||||||||||||||| Sbjct: 183 ttgcgatcgtaacgtcgcttcccttgagcagccaaactatccttacccttcttatactgt 124 Query: 502 gtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggt 561 |||||||||| | | ||||||||| ||||||||||| ||||||| || |||||||| || Sbjct: 123 gtaaccttgt-gcaaagtgtgcttcctgcactccttgctcttgcaataagtcttcttcgt 65 Query: 562 ctt 564 ||| Sbjct: 64 ctt 62
>gb|U64677.1|GHU64677 Gossypium hirsutum ribosomal protein L44 isoform a (RL44), complete cds Length = 455 Score = 192 bits (97), Expect = 9e-46 Identities = 248/297 (83%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 268 agagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctcttgata 327 ||||||||||| || ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 327 agagatgttcctttccccttcttgtctccaccaatctcaaagtgcttgcacctcttgatc 268 Query: 328 gcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcacaatcttctttgtt 387 | | ||||||| ||||||||| | ||||| |||| | | |||||||||||||| || Sbjct: 267 ggatgttgtgaaacgtgcttgcaaccttggcattgcagccttagcacaatcttcttggtg 208 Query: 388 gtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcgg 447 ||||| |||||||||||||| || || || ||||| ||||| || || || || || ||| Sbjct: 207 gtctttgccttcttgtggaacactggtttggtctgaccaccgtaaccggattgtttccgg 148 Query: 448 tcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaacc 507 || || |||||||||||||| |||| | || ||||| |||||||||||||| || ||| Sbjct: 147 tcgtaacgacgcttcccctgtgcagccaaactatccttgcccttcttatactgtgtgacc 88 Query: 508 ttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 |||| | | ||||| ||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 87 ttgt-gcaaagtgtgtttcctgcactccttgctcttgcagtaggtcttcttggtctt 32
>gb|M62396.1|YSAQLAG C.maltosa ribosomal protein L41 (LEL41) gene, complete cds Length = 515 Score = 165 bits (83), Expect = 2e-37 Identities = 240/291 (82%), Gaps = 1/291 (0%) Strand = Plus / Minus Query: 274 gttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctcttgatagcacgt 333 |||||||| || |||||||| ||||| |||||||| ||||||||||||||||| | | Sbjct: 339 gttccctttcctttcttgtccccacctatttcaaaatgcttgcacctcttgattgggtgc 280 Query: 334 tgtgagtagtgcttgcagctctggcactgcaacttcagcacaatcttctttgttgtcttg 393 ||||| || ||||||| |||||||||| | ||| ||||||||||||||| || || Sbjct: 279 tgtgaaacatgtttgcagccttggcactgcagcctcaacacaatcttctttgtggtttta 220 Query: 394 gccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatag 453 ||||| |||||||| |||||||| ||||| |||||||| || || || || | |||||| Sbjct: 219 gcctttttgtggaagacaggcttggtctgaccaccataacctgattgtttcctgtcataa 160 Query: 454 cgacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtgg 513 ||||||||||||||||||| | ||| || || |||||||| ||||| || ||||| | | Sbjct: 159 cgacgcttcccctgagcagccaagctatctttccccttcttgtactgtgtcaccttat-g 101 Query: 514 gagggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 | ||||||||| |||||||||||| |||||||||||||||||| ||||| Sbjct: 100 caaggtgtgctttttgcactccttggacttgcagtaggtcttctttgtctt 50
>gb|AF148853.2|AF148853 Leishmania amazonensis 60S ribosomal protein L44 (RPL44) mRNA, complete cds Length = 458 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Minus Query: 357 gcactgcaacttcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggctt 416 |||||||| |||||||||||||||||| || |||||||||||||||||||| || ||||| Sbjct: 269 gcactgcagcttcagcacaatcttcttggtcgtcttggccttcttgtggaagacgggctt 210 Query: 417 cgtctggccaccatatccagactgcttgcggtcatagcgacgcttcccctgagcagaaag 476 |||||||||||||| ||||||||||||||||| || |||||||| || ||||| |||| Sbjct: 209 ggtctggccaccataaccagactgcttgcggtcgtaacgacgcttaccgcgagcaaaaag 150 Query: 477 gc 478 || Sbjct: 149 gc 148
>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24 Length = 87487 Score = 115 bits (58), Expect = 2e-22 Identities = 143/170 (84%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 |||| |||||||| |||||||| ||||| |||||||| ||||| || || |||||||| | Sbjct: 48409 cctttttgtggaagacaggcttagtctgaccaccataaccagattgtttacggtcataac 48350 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 ||||||| || ||||||| ||| ||||| ||||||||||| || |||||||||||||| Sbjct: 48349 gacgctttccttgagcagcaagactgtctttacccttcttgtattgggtaaccttgtgca 48290 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttcttggtctt 564 | | | ||||| ||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 48289 aag-tatgctttttgcattccttgttcttacagtaagtgttctttgtctt 48241 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 268 agagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctct 322 |||||||||||||| ||||||||||| |||||||| || || ||||||||||||| Sbjct: 48799 agagatgttccctttcccttcttgtcaccaccgatctcgaaatgcttgcacctct 48745
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 111 bits (56), Expect = 3e-21 Identities = 138/164 (84%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 ||||||||||||| || ||||| ||||| || ||||| ||||| || || || ||||| | Sbjct: 1052 ccttcttgtggaagacgggcttggtctgacctccataaccagattgtttacgatcataac 1111 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 ||||||| || || |||| |||||| || ||||| ||||||||||| || ||||||| | Sbjct: 1112 gacgctttccttgggcagcaaggctatctttacctttcttatactgcgtcaccttgt-gc 1170 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttctt 558 | ||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 1171 aaggtatgcttcttgcactccttgttcttgcagtaagtgttctt 1214 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 260 cttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacc 319 |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 684 cttaaaagagagatgttccctttcccttcttgtctccaccgatctcaaagtgcttgcacc 743 Query: 320 tct 322 ||| Sbjct: 744 tct 746 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 343 tgcttgcagctctggcactgcaacttcagcacaatcttctttgttgtcttggcct 397 ||||||||||| ||||| || | | |||||||||||||||| |||||||| |||| Sbjct: 851 tgcttgcagctttggcattgaagcctcagcacaatcttcttagttgtcttagcct 905
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 111 bits (56), Expect = 3e-21 Identities = 138/164 (84%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 ||||||||||||| || ||||| ||||| || ||||| ||||| || || || ||||| | Sbjct: 140492 ccttcttgtggaagacgggcttggtctgacctccataaccagattgtttacgatcataac 140551 Query: 455 gacgcttcccctgagcagaaaggctgtccttacccttcttatactgggtaaccttgtggg 514 ||||||| || || |||| |||||| || ||||| ||||||||||| || ||||||| | Sbjct: 140552 gacgctttccttgggcagcaaggctatctttacctttcttatactgcgtcaccttgt-gc 140610 Query: 515 agggtgtgcttcttgcactccttgttcttgcagtaggtcttctt 558 | ||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 140611 aaggtatgcttcttgcactccttgttcttgcagtaagtgttctt 140654 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 260 cttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacc 319 |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 140124 cttaaaagagagatgttccctttcccttcttgtctccaccgatctcaaagtgcttgcacc 140183 Query: 320 tct 322 ||| Sbjct: 140184 tct 140186 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 343 tgcttgcagctctggcactgcaacttcagcacaatcttctttgttgtcttggcct 397 ||||||||||| ||||| || | | |||||||||||||||| |||||||| |||| Sbjct: 140291 tgcttgcagctttggcattgaagcctcagcacaatcttcttagttgtcttagcct 140345
>dbj|AK058830.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-A07, full insert sequence Length = 355 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 261 ttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacct 320 |||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 114 ttagaaaagagatgttcccttgcccttcttgtctccaccaatctcgaaatgcttgcacct 55 Query: 321 cttgatagcacgttgtgagtagtgcttgcagctctggcactgcaacttcagcac 374 |||||| | | || ||||| ||||||||||| ||||| |||| ||||||||| Sbjct: 54 cttgatggggtgctgggagtaatgcttgcagctttggcattgcagcttcagcac 1
>gb|DQ284457.1| Solanum tuberosum clone 014B12 ribosomal protein L41-like mRNA, complete cds Length = 547 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Minus Query: 354 ctggcactgcaacttcagcacaatcttctttgttgtcttggccttcttgtggaaaacagg 413 |||||| |||||| | |||||||||||||| || || ||||||||||||||||| || || Sbjct: 277 ctggcattgcaaccttagcacaatcttcttggtagtgttggccttcttgtggaagacggg 218 Query: 414 cttcgtctggccaccatatccagactgcttgcggtcatagcgacgcttcccctgagc 470 || ||||| |||||||| ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 217 tttagtctgcccaccataaccagactgcttacgatcataacgacgcttcccttgagc 161 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 260 cttagaagagagatgttcccttgcccttcttgtctccaccgatttcaaagtgcttgcacc 319 |||| |||||||| ||||||| |||||||| |||||||| ||||||||||||||||||| Sbjct: 371 cttaaaagagagaagttccctgtcccttcttatctccaccaatttcaaagtgcttgcacc 312 Query: 320 tcttgat 326 ||||||| Sbjct: 311 tcttgat 305
>ref|XM_567391.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNJ03120) partial mRNA Length = 455 Score = 103 bits (52), Expect = 6e-19 Identities = 149/180 (82%), Gaps = 1/180 (0%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatat 432 |||| |||||| || ||||| |||||||||||||| |||||||| ||||| ||||| || Sbjct: 220 acaaccttcttggtggtcttagccttcttgtggaagacaggcttggtctgaccaccgtaa 161 Query: 433 ccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttc 492 || || ||||| ||||| || || ||||| || || || ||||| |||||| |||||| Sbjct: 160 ccggattgctttcggtcgtatcgtcgctttccttgggcggaaagagagtccttgcccttc 101 Query: 493 ttatactgggtaaccttgtgggagggtgtgcttcttgcactccttgttcttgcagtaggt 552 || ||||||||||||||||||| ||||||||||| |||| |||| |||||||||||| Sbjct: 100 ttgtactgggtaaccttgtggg-gggtgtgcttcctgcaagccttacccttgcagtaggt 42
>ref|XM_800942.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L44 (Tc00.1047053506815.60) partial mRNA Length = 321 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 366 cttcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggcc 425 |||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| || Sbjct: 213 cttcaggacaatcttctttgtcgtcttggccttcttgtggaaaatgggcttcgtctgacc 154 Query: 426 accatatccagactgcttgcggtc 449 ||||| || ||||| |||||||| Sbjct: 153 gccataaccggactgtttgcggtc 130
>ref|XM_798924.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L44 (Tc00.1047053509583.4) partial mRNA Length = 299 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 366 cttcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggcc 425 |||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| || Sbjct: 191 cttcaggacaatcttctttgtcgtcttggccttcttgtggaaaatgggcttcgtctgacc 132 Query: 426 accatatccagactgcttgcggtc 449 ||||| || ||||| |||||||| Sbjct: 131 gccataaccggactgtttgcggtc 108
>ref|XM_798949.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L44 (Tc00.1047053503709.20) partial mRNA Length = 258 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 366 cttcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggcc 425 |||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| || Sbjct: 213 cttcaggacaatcttctttgtcgtcttggccttcttgtggaaaatgggcttcgtctgacc 154 Query: 426 accatatccagactgcttgcggtc 449 ||||| || ||||| |||||||| Sbjct: 153 gccataaccggactgtttgcggtc 130
>ref|XM_390357.1| Gibberella zeae PH-1 chromosome 1 RL44_PICJA 60S RIBOSOMAL PROTEIN L44 (L41) (FG10181.1) partial mRNA Length = 351 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatat 432 |||| |||||| || |||||||||||||||||||| || ||||| ||||| ||||| || Sbjct: 236 acaaccttcttggtggtcttggccttcttgtggaagacgggcttggtctgaccaccgtaa 177 Query: 433 ccagactgcttgcggtcatagcgacgcttcccctg 467 || ||||||||||||||||| |||||||| ||||| Sbjct: 176 ccggactgcttgcggtcatatcgacgcttaccctg 142
>emb|AL117037.1|CNS01DN9 Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 245 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 186 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 185 accagattgctttcggtcataacgacgctttccctgagc 147
>emb|AL116729.1|CNS01DEP Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 253 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 194 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 193 accagattgctttcggtcataacgacgctttccctgagc 155
>emb|AL115936.1|CNS01CSO Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 231 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 172 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 171 accagattgctttcggtcataacgacgctttccctgagc 133
>emb|AL116457.1|CNS01D75 Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 250 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 191 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 190 accagattgctttcggtcataacgacgctttccctgagc 152
>emb|AL116390.1|CNS01D5A Botrytis cinerea strain T4 cDNA library Length = 636 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 246 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 187 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 186 accagattgctttcggtcataacgacgctttccctgagc 148
>emb|AL115189.1|CNS01C7X Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 244 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 185 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 184 accagattgctttcggtcataacgacgctttccctgagc 146
>emb|AL114130.1|CNS01BEI Botrytis cinerea strain T4 cDNA library Length = 840 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 214 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 155 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 154 accagattgctttcggtcataacgacgctttccctgagc 116
>emb|AL113517.1|CNS01AXH Botrytis cinerea strain T4 cDNA library Length = 480 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 214 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 155 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 154 accagattgctttcggtcataacgacgctttccctgagc 116
>emb|AL112901.1|CNS01AGD Botrytis cinerea strain T4 cDNA library Length = 516 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 232 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 173 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 172 accagattgctttcggtcataacgacgctttccctgagc 134
>emb|AL112624.1|CNS01A8O Botrytis cinerea strain T4 cDNA library Length = 480 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 214 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 155 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 154 accagattgctttcggtcataacgacgctttccctgagc 116
>emb|AL112342.1|CNS01A0U Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 247 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 188 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 187 accagattgctttcggtcataacgacgctttccctgagc 149
>emb|AL111690.1|CNS019IQ Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 246 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 187 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 186 accagattgctttcggtcataacgacgctttccctgagc 148
>emb|AL110700.1|CNS018R9 Botrytis cinerea strain T4 cDNA library Length = 480 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 202 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 143 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 142 accagattgctttcggtcataacgacgctttccctgagc 104
>emb|AL111040.1|CNS0190P Botrytis cinerea strain T4 cDNA library Length = 518 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||| ||||||||| ||||| || |||||||||||||| || || ||||| |||||||| Sbjct: 214 cacaaccttctttgtggtctttgctttcttgtggaaaactggttttgtctgaccaccata 155 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctgagc 470 ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 154 accagattgctttcggtcataacgacgctttccctgagc 116
>gb|U31912.1|CRU31912 Chlamydomonas reinhardtii ribosomal protein L41 (RPL41) mRNA, complete cds Length = 336 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacc 428 |||||| |||||||| || |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 215 cagcacgatcttcttggtggtcttggccttcttgtggaagacgggcttggtctgaccacc 156 Query: 429 atatccagactgcttgcggtcatagcgacgcttcccctg 467 || || |||||||||||||| ||||| ||||| ||||| Sbjct: 155 gtaacccgactgcttgcggtcgtagcggcgcttgccctg 117 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 285 cttcttgtctccaccgatttcaaagtgcttgca 317 ||||||||| |||||||| || ||||||||||| Sbjct: 299 cttcttgtcaccaccgatctcgaagtgcttgca 267
>ref|XM_537433.2| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a (LOC480311), mRNA Length = 481 Score = 89.7 bits (45), Expect = 9e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || |||||||| |||||| ||||| ||||| |||| Sbjct: 288 tcagcacaatcttctttgtggttttagccttcttccggaaaattggctttgtctgcccac 229 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttac 487 |||| ||| |||||| || |||||||| | ||| ||||| ||| ||||| ||||| | Sbjct: 228 catagccactctgcttccgatcatagcgcctctttccctgggcataaagggaatccttgc 169 Query: 488 ccttcttatactgggtaaccttgtg 512 |||||||||||||||| || ||||| Sbjct: 168 ccttcttatactgggtcactttgtg 144
>ref|XM_368698.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00546.4) partial mRNA Length = 360 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 |||||||||||| || ||||| |||||||||||||| || ||||| ||||| ||||| || Sbjct: 207 cacaatcttcttggtggtctttgccttcttgtggaagacgggcttggtctgaccaccgta 148 Query: 432 tccagactgcttgcggtcatagcgacgcttcccctg 467 ||| |||||||||||||| || || ||||| ||||| Sbjct: 147 tcctgactgcttgcggtcgtatcggcgctttccctg 112 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 ggtgtgcttcttgcactcctt 537 ||||||||||||||||||||| Sbjct: 63 ggtgtgcttcttgcactcctt 43
>ref|XM_823312.1| Trypanosoma brucei TREU927 60S ribosomal protein L44 (Tb11.02.0740) partial mRNA Length = 321 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 366 cttcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggcc 425 |||||| ||||||||||| || ||||| ||||| ||||| || | ||||| ||||| || Sbjct: 213 cttcagaacaatcttcttggtcgtcttcgcctttttgtgaaagatgggctttgtctgacc 154 Query: 426 accatatccagactgcttgcggtcatagcgacgctt 461 |||||| ||||||||||||||||| ||||||||||| Sbjct: 153 accataaccagactgcttgcggtcgtagcgacgctt 118
>ref|XM_806327.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L44 (Tc00.1047053507105.40) partial mRNA Length = 321 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 366 cttcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggcc 425 |||||| |||||||||||||| || ||||||||||||||||||| ||||||||||| || Sbjct: 213 cttcaggacaatcttctttgtcgttttggccttcttgtggaaaatgggcttcgtctgacc 154 Query: 426 accatatccagactgcttgcggtc 449 ||||| || ||||| |||||||| Sbjct: 153 gccataaccggactgtttgcggtc 130
>emb|X52122.1|TBRPL44 Trypanosoma brucei mRNA for ribosomal protein L44 Length = 443 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 366 cttcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggcc 425 |||||| ||||||||||| || ||||| ||||| ||||| || | ||||| ||||| || Sbjct: 252 cttcagaacaatcttcttggtcgtcttcgcctttttgtgaaagatgggctttgtctgacc 193 Query: 426 accatatccagactgcttgcggtcatagcgacgctt 461 |||||| ||||||||||||||||| ||||||||||| Sbjct: 192 accataaccagactgcttgcggtcgtagcgacgctt 157
>ref|XM_420184.1| PREDICTED: Gallus gallus similar to large subunit ribosomal protein L36a (LOC422189), mRNA Length = 718 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||| | Sbjct: 230 tcagcacaatcttctttgtggtcttggccttcttacggaagataggcttcgtctggccgc 171 Query: 428 cata 431 |||| Sbjct: 170 cata 167 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 285 cttcttgtctccaccgatttcaaagtgcttgcacctctt 323 |||||||||||| || | ||||||||||||||| ||||| Sbjct: 319 cttcttgtctcctcccagttcaaagtgcttgcatctctt 281
>ref|XM_984357.1| PREDICTED: Mus musculus similar to large subunit ribosomal protein L36a (LOC632169), mRNA Length = 556 Score = 79.8 bits (40), Expect = 9e-12 Identities = 121/148 (81%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 |||||||||| |||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 341 tcagcacaattttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 282 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttac 487 |||| ||| ||| || | ||||||||| ||||| ||||| ||| | | |||||| | Sbjct: 281 catagccactctgtttcctgtcatagcgccgctttccctgggcatacaaagagtccttgc 222 Query: 488 ccttcttatactgggtaaccttgtggga 515 ||||||||||||| || ||||||||||| Sbjct: 221 ccttcttatactgtgtcaccttgtggga 194
>ref|XM_907008.2| PREDICTED: Mus musculus similar to large subunit ribosomal protein L36a (LOC632169), mRNA Length = 556 Score = 79.8 bits (40), Expect = 9e-12 Identities = 121/148 (81%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 |||||||||| |||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 341 tcagcacaattttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 282 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttac 487 |||| ||| ||| || | ||||||||| ||||| ||||| ||| | | |||||| | Sbjct: 281 catagccactctgtttcctgtcatagcgccgctttccctgggcatacaaagagtccttgc 222 Query: 488 ccttcttatactgggtaaccttgtggga 515 ||||||||||||| || ||||||||||| Sbjct: 221 ccttcttatactgtgtcaccttgtggga 194
>ref|XM_890670.2| PREDICTED: Mus musculus similar to large subunit ribosomal protein L36a (LOC624713), mRNA Length = 556 Score = 79.8 bits (40), Expect = 9e-12 Identities = 121/148 (81%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 |||||||||| |||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 341 tcagcacaattttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 282 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttac 487 |||| ||| ||| || | ||||||||| ||||| ||||| ||| | | |||||| | Sbjct: 281 catagccactctgtttcctgtcatagcgccgctttccctgggcatacaaagagtccttgc 222 Query: 488 ccttcttatactgggtaaccttgtggga 515 ||||||||||||| || ||||||||||| Sbjct: 221 ccttcttatactgtgtcaccttgtggga 194
>dbj|AB226038.1| Aspergillus oryzae cDNA, contig sequence: AoEST2894 Length = 1115 Score = 79.8 bits (40), Expect = 9e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 376 atcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatcca 435 |||||||| || |||||||||||||||||||| || ||||| ||||| |||||||| || Sbjct: 811 atcttcttggtagtcttggccttcttgtggaagacgggcttggtctgaccaccataaccg 752 Query: 436 gactgcttgcggtcatagcgacgcttcccctg 467 |||||| |||||||| |||||||| ||||| Sbjct: 751 ctctgcttccggtcataacgacgcttaccctg 720 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 516 gggtgtgcttcttgcactccttgttcttgcagtaggtc 553 ||||||||||||||||||||||| ||||||||||||| Sbjct: 605 gggtgtgcttcttgcactccttgcccttgcagtaggtc 568
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 79.8 bits (40), Expect = 9e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 376 atcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatcca 435 |||||||| || |||||||||||||||||||| || ||||| ||||| |||||||| || Sbjct: 2270671 atcttcttggtagtcttggccttcttgtggaagacgggcttggtctgaccaccataaccg 2270612 Query: 436 gactgcttgcggtcatagcgacgcttcccctg 467 |||||| |||||||| |||||||| ||||| Sbjct: 2270611 ctctgcttccggtcataacgacgcttaccctg 2270580 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 516 gggtgtgcttcttgcactccttgttcttgcagtaggtc 553 ||||||||||||||||||||||| ||||||||||||| Sbjct: 2270465 gggtgtgcttcttgcactccttgcccttgcagtaggtc 2270428
>emb|CR406972.1| Gallus gallus finished cDNA, clone ChEST993g1 Length = 1083 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||| | Sbjct: 919 tcagcacaatcttctttgtggtcttggccttcttacggaagataggcttcgtctggccgc 860 Query: 428 cata 431 |||| Sbjct: 859 cata 856 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 285 cttcttgtctccaccgatttcaaagtgcttgcacctctt 323 |||||||||||| || | ||||||||||||||| ||||| Sbjct: 1008 cttcttgtctcctcccagttcaaagtgcttgcatctctt 970
>emb|CR390241.1| Gallus gallus finished cDNA, clone ChEST920d2 Length = 380 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||| | Sbjct: 216 tcagcacaatcttctttgtggtcttggccttcttacggaagataggcttcgtctggccgc 157 Query: 428 cata 431 |||| Sbjct: 156 cata 153 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 285 cttcttgtctccaccgatttcaaagtgcttgcacctctt 323 |||||||||||| || | ||||||||||||||| ||||| Sbjct: 305 cttcttgtctcctcccagttcaaagtgcttgcatctctt 267
>gb|AC102235.10| Mus musculus chromosome 3, clone RP24-97D20, complete sequence Length = 183178 Score = 79.8 bits (40), Expect = 9e-12 Identities = 121/148 (81%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 |||||||||| |||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 145011 tcagcacaattttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 145070 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttac 487 |||| ||| ||| || | ||||||||| ||||| ||||| ||| | | |||||| | Sbjct: 145071 catagccactctgtttcctgtcatagcgccgctttccctgggcatacaaagagtccttgc 145130 Query: 488 ccttcttatactgggtaaccttgtggga 515 ||||||||||||| || ||||||||||| Sbjct: 145131 ccttcttatactgtgtcaccttgtggga 145158
>ref|XM_959447.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L44 (L41) (NCU00706.1) partial mRNA Length = 354 Score = 73.8 bits (37), Expect = 5e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 378 cttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccaga 437 |||||| || ||||| |||||||||||||| || ||||| ||||| ||||| || || || Sbjct: 201 cttcttggtggtcttcgccttcttgtggaagacgggcttggtctgaccaccgtaaccgga 142 Query: 438 ctgcttgcggtcatagcgacgcttcccctgagc 470 |||||||||||| || || ||||| |||||||| Sbjct: 141 ctgcttgcggtcgtaacggcgctttccctgagc 109
>ref|XM_324885.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L44 (L41) (NCU00706.1) partial mRNA Length = 354 Score = 73.8 bits (37), Expect = 5e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 378 cttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccaga 437 |||||| || ||||| |||||||||||||| || ||||| ||||| ||||| || || || Sbjct: 201 cttcttggtggtcttcgccttcttgtggaagacgggcttggtctgaccaccgtaaccgga 142 Query: 438 ctgcttgcggtcatagcgacgcttcccctgagc 470 |||||||||||| || || ||||| |||||||| Sbjct: 141 ctgcttgcggtcgtaacggcgctttccctgagc 109
>gb|AF310257.1|AF310257 Trypanosoma cruzi chitin binding-like protein 3 (cblp3) mRNA, complete cds Length = 797 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 366 cttcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcg 418 |||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 580 cttcaggacaatcttctttgtcgtcttggccttcttgtggaaaatgggcttcg 632
>emb|AL646020.15| Mouse DNA sequence from clone RP23-74L9 on chromosome 11 Contains the gene for a novel histone H2A family member, a ribosomal protein L36a (Rpl36a) pseudogene, a SMT3 (supressor of mif two, 3) homolog (S. cerevisiae) (Smt3h) pseudogene, a ribosomal protein S15A (Rps15a) pseudogene, the Purb gene for purine rich element binding protein B, a novel gene and two CpG islands, complete sequence Length = 73838 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| |||||||||| |||||| ||||| |||| Sbjct: 23227 tcagcacaatcttctttgtagttttagcctttttgtggaaaataggcttagtctgcccac 23168 Query: 428 cata 431 |||| Sbjct: 23167 cata 23164
>ref|XM_521714.1| PREDICTED: Pan troglodytes similar to large subunit ribosomal protein L36a (LOC466314), mRNA Length = 357 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacc 428 |||||||||||||||||| || || ||||| || ||||||| ||||| ||||| ||||| Sbjct: 204 cagcacaatcttctttgtagttttagcctttttctggaaaatcggcttagtctgcccacc 145 Query: 429 atatccagactgcttgcggtcatagcgacgcttcccctg 467 ||| ||| |||||| | |||||| || ||||||||||| Sbjct: 144 atagccactctgctttctgtcataacgccgcttcccctg 106
>gb|M19635.1|RATRPL36A Rattus norvegicus large subunit ribosomal protein L36a mRNA, complete cds Length = 444 Score = 69.9 bits (35), Expect = 9e-09 Identities = 116/143 (81%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | |||| ||||| ||||| || ||| Sbjct: 248 agcacaatcttctttgtggttttggccttctttcgaaaaattggctttgtctgcccgcca 189 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| |||||| ||||| ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 188 tagccactctgcttccggtcgtagcgccgctttccttgggcatacagggaatccttgccc 129 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 128 ttcttatactgggtcactttgtg 106
>ref|NM_001001.3| Homo sapiens ribosomal protein L36a-like (RPL36AL), mRNA Length = 549 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| |||||| ||||| ||||| |||||| Sbjct: 309 agcacaatcttctttgtggtcttagccttcttccggaaaattggctttgtctgcccacca 250 Query: 430 tatccagactgcttgcggtcatagcg 455 || ||| |||||| || |||||||| Sbjct: 249 tagccactctgcttccgatcatagcg 224
>gb|BC070207.1| Homo sapiens ribosomal protein L36a-like, mRNA (cDNA clone MGC:88188 IMAGE:4271403), complete cds Length = 542 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| |||||| ||||| ||||| |||||| Sbjct: 298 agcacaatcttctttgtggtcttagccttcttccggaaaattggctttgtctgcccacca 239 Query: 430 tatccagactgcttgcggtcatagcg 455 || ||| |||||| || |||||||| Sbjct: 238 tagccactctgcttccgatcatagcg 213
>gb|BC000741.2| Homo sapiens ribosomal protein L36a-like, mRNA (cDNA clone MGC:2225 IMAGE:3507009), complete cds Length = 536 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| |||||| ||||| ||||| |||||| Sbjct: 296 agcacaatcttctttgtggtcttagccttcttccggaaaattggctttgtctgcccacca 237 Query: 430 tatccagactgcttgcggtcatagcg 455 || ||| |||||| || |||||||| Sbjct: 236 tagccactctgcttccgatcatagcg 211
>gb|BC003145.1| Homo sapiens ribosomal protein L36a-like, mRNA (cDNA clone MGC:3918 IMAGE:2957923), complete cds Length = 518 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| |||||| ||||| ||||| |||||| Sbjct: 289 agcacaatcttctttgtggtcttagccttcttccggaaaattggctttgtctgcccacca 230 Query: 430 tatccagactgcttgcggtcatagcg 455 || ||| |||||| || |||||||| Sbjct: 229 tagccactctgcttccgatcatagcg 204
>emb|AL109770.1|SPAC15E1 S.pombe chromosome I cosmid c15E1 Length = 12855 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 394 gccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatag 453 ||||||||||||||||| ||||| || || |||||| | ||| |||||||||||||| Sbjct: 2823 gccttcttgtggaaaacgggcttagtttgaccaccaaaaccactttgcttgcggtcataa 2764 Query: 454 cgacgcttcccctgagca 471 |||||||| ||||||||| Sbjct: 2763 cgacgcttaccctgagca 2746
>emb|CR542166.1| Homo sapiens full open reading frame cDNA clone RZPDo834B0624D for gene RPL36AL, ribosomal protein L36a-like; complete cds, incl. stopcodon Length = 321 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| |||||| ||||| ||||| |||||| Sbjct: 203 agcacaatcttctttgtggtcttagccttcttccggaaaattggctttgtctgcccacca 144 Query: 430 tatccagactgcttgcggtcatagcg 455 || ||| |||||| || |||||||| Sbjct: 143 tagccactctgcttccgatcatagcg 118
>ref|NM_001019727.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC15E1.03), partial mRNA Length = 321 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 394 gccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatag 453 ||||||||||||||||| ||||| || || |||||| | ||| |||||||||||||| Sbjct: 185 gccttcttgtggaaaacgggcttagtttgaccaccaaaaccactttgcttgcggtcataa 126 Query: 454 cgacgcttcccctgagca 471 |||||||| ||||||||| Sbjct: 125 cgacgcttaccctgagca 108
>emb|AL591767.2|CNS07EGK Human chromosome 14 DNA sequence BAC R-831F12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 189410 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| |||||| ||||| ||||| |||||| Sbjct: 247 agcacaatcttctttgtggtcttagccttcttccggaaaattggctttgtctgcccacca 306 Query: 430 tatccagactgcttgcggtcatagcg 455 || ||| |||||| || |||||||| Sbjct: 307 tagccactctgcttccgatcatagcg 332
>dbj|AB063609.1| Homo sapiens RPL36AL mRNA for ribosomal protein L36a-like, complete cds Length = 520 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| |||||| ||||| ||||| |||||| Sbjct: 309 agcacaatcttctttgtggtcttagccttcttccggaaaattggctttgtctgcccacca 250 Query: 430 tatccagactgcttgcggtcatagcg 455 || ||| |||||| || |||||||| Sbjct: 249 tagccactctgcttccgatcatagcg 224
>gb|BC107716.1| Homo sapiens ribosomal protein L36a-like, mRNA (cDNA clone MGC:111574 IMAGE:6727975), complete cds Length = 565 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| |||||| ||||| ||||| |||||| Sbjct: 323 agcacaatcttctttgtggtcttagccttcttccggaaaattggctttgtctgcccacca 264 Query: 430 tatccagactgcttgcggtcatagcg 455 || ||| |||||| || |||||||| Sbjct: 263 tagccactctgcttccgatcatagcg 238
>emb|AL139099.3|CNS01DX7 Human chromosome 14 DNA sequence BAC R-649E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157010 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| |||||| ||||| ||||| |||||| Sbjct: 43731 agcacaatcttctttgtggtcttagccttcttccggaaaattggctttgtctgcccacca 43672 Query: 430 tatccagactgcttgcggtcatagcg 455 || ||| |||||| || |||||||| Sbjct: 43671 tagccactctgcttccgatcatagcg 43646
>gb|M15661.1|HUMRPZH21 Human ribosomal protein mRNA, complete cds Length = 386 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| |||||| ||||| ||||| |||||| Sbjct: 233 agcacaatcttctttgtggtcttagccttcttccggaaaattggctttgtctgcccacca 174 Query: 430 tatccagactgcttgcggtcatagcg 455 || ||| |||||| || |||||||| Sbjct: 173 tagccactctgcttccgatcatagcg 148
>gb|AC007866.11| Trypanosoma brucei chromosome 2 clone RPCI93-36E18, complete sequence Length = 110159 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatat 432 ||||| || ||||| || || |||||||||||||||| ||| |||||||| |||||||| Sbjct: 15977 acaattttttttgtcgttttcgccttcttgtggaaaataggtttcgtctgaccaccataa 15918 Query: 433 ccagactgcttgcggtc 449 || ||||| |||||||| Sbjct: 15917 ccggactgtttgcggtc 15901
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatat 432 ||||| || ||||| || || |||||||||||||||| ||| |||||||| |||||||| Sbjct: 1099766 acaattttttttgtcgttttcgccttcttgtggaaaataggtttcgtctgaccaccataa 1099707 Query: 433 ccagactgcttgcggtc 449 || ||||| |||||||| Sbjct: 1099706 ccggactgtttgcggtc 1099690
>ref|XM_946650.1| Trypanosoma brucei TREU927 60S ribosomal protein L44 (Tb927.2.6090) partial mRNA Length = 321 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatat 432 ||||| || ||||| || || |||||||||||||||| ||| |||||||| |||||||| Sbjct: 206 acaattttttttgtcgttttcgccttcttgtggaaaataggtttcgtctgaccaccataa 147 Query: 433 ccagactgcttgcggtc 449 || ||||| |||||||| Sbjct: 146 ccggactgtttgcggtc 130
>emb|AJ250726.2|TBR250726 Trypanosoma brucei HSP100 gene, GPI-PLC gene, beta prime COP gene, RPL44 gene, ORF1 (partial), ORF2, ORF3, ORF4, ORF5, ORF6 and ORF7 (partial), shorter allele Length = 24181 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatat 432 ||||| || ||||| || || |||||||||||||||| ||| |||||||| |||||||| Sbjct: 20184 acaattttttttgtcgttttcgccttcttgtggaaaataggtttcgtctgaccaccataa 20125 Query: 433 ccagactgcttgcggtc 449 || ||||| |||||||| Sbjct: 20124 ccggactgtttgcggtc 20108
>gb|DQ066246.1| Ixodes scapularis isolate ISN-L-86 ribosomal protein L44 mRNA, complete cds Length = 318 Score = 65.9 bits (33), Expect = 1e-07 Identities = 49/53 (92%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 481 tccttacccttcttatactgggtaaccttgtgggagggtgtgcttcttgcact 533 ||||| |||||||||||||| || ||||||| ||||||||||||||||||||| Sbjct: 95 tccttgcccttcttatactgtgtcaccttgt-ggagggtgtgcttcttgcact 44 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 276 tcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctcttgat 326 |||||||| ||||||||||| ||||| || ||||||||||| | |||||| Sbjct: 300 tcccttgcgtttcttgtctccgccgatctcgaagtgcttgcagcgcttgat 250 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggcctt 398 ||||||||||||||| || ||||||||||| Sbjct: 207 cagcacaatcttcttggtggtcttggcctt 178
>gb|AC123684.8| Mus musculus chromosome 3, clone RP23-297F14, complete sequence Length = 200566 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 145863 tcagcacaatcttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 145922 Query: 428 cata 431 |||| Sbjct: 145923 cata 145926
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 63.9 bits (32), Expect = 5e-07 Identities = 48/52 (92%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 480 gtccttacccttcttatactgggtaaccttgtgggagggtgtgcttcttgca 531 |||||| |||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 967924 gtccttgcccttcttgtactgggtaaccttgtggg-gggtgtgcttcctgca 967874 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 388 gtcttggccttcttgtggaaaacaggcttcgtctggccacc 428 ||||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 968142 gtcttagccttcttgtggaagacaggcttggtctgaccacc 968102
>gb|AC102091.7| Mus musculus chromosome 18, clone RP23-9K20, complete sequence Length = 252563 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 232901 tcagcacaatcttctttgtagttttagcctttttgcggaaaaaaggcttagtctgcccac 232842 Query: 428 cata 431 |||| Sbjct: 232841 cata 232838
>ref|XM_750055.1| Aspergillus fumigatus Af293 ribosomal protein L41 (Afu2g08130) partial mRNA Length = 828 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 376 atcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatcca 435 |||||||| || ||||| |||||||||||||| || ||||| ||||| ||||| || || Sbjct: 566 atcttcttggtggtcttagccttcttgtggaagacgggcttggtctgaccaccgtaaccg 507 Query: 436 gactgcttgcggtcatagcgacgcttcccctg 467 |||||||||||| || |||||||| ||||| Sbjct: 506 ctctgcttgcggtcgtaacgacgcttaccctg 475
>gb|AC138134.6| Mus musculus strain C57BL/6J clone rp23-382i2 map 18, complete sequence Length = 202316 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 79125 tcagcacaatcttctttgtagttttagcctttttgcggaaaaaaggcttagtctgcccac 79066 Query: 428 cata 431 |||| Sbjct: 79065 cata 79062
>dbj|AK168535.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920030G04 product:ribosomal protein L36a, full insert sequence Length = 390 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 235 tcagcacaatcttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 176 Query: 428 cata 431 |||| Sbjct: 175 cata 172
>dbj|AK170127.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630020E11 product:ribosomal protein L36a, full insert sequence Length = 454 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 237 tcagcacaatcttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 178 Query: 428 cata 431 |||| Sbjct: 177 cata 174
>dbj|AK002540.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610011G24 product:ribosomal protein L36a, full insert sequence Length = 392 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 237 tcagcacaatcttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 178 Query: 428 cata 431 |||| Sbjct: 177 cata 174
>dbj|AK012502.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700067M10 product:ribosomal protein L44, full insert sequence Length = 457 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 238 tcagcacaatcttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 179 Query: 428 cata 431 |||| Sbjct: 178 cata 175
>gb|AF118148.1|AF118148 Filobasidiella neoformans ribosomal protein L41 gene, complete cds Length = 1702 Score = 63.9 bits (32), Expect = 5e-07 Identities = 48/52 (92%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 480 gtccttacccttcttatactgggtaaccttgtgggagggtgtgcttcttgca 531 |||||| |||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 1117 gtccttgcccttcttgtactgggtaaccttgtggg-gggtgtgcttcctgca 1067 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 388 gtcttggccttcttgtggaaaacaggcttcgtctggccacc 428 ||||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 1335 gtcttagccttcttgtggaagacaggcttggtctgaccacc 1295
>gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosome 14, complete sequence Length = 152012 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 133438 tcagcacaatcttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 133497 Query: 428 cata 431 |||| Sbjct: 133498 cata 133501
>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence Length = 199716 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 6065 tcagcacaatcttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 6124 Query: 428 cata 431 |||| Sbjct: 6125 cata 6128
>gb|BC027515.1| Mus musculus ribosomal protein L36a, mRNA (cDNA clone MGC:41090 IMAGE:1383212), complete cds Length = 456 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 223 tcagcacaatcttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 164 Query: 428 cata 431 |||| Sbjct: 163 cata 160
>emb|CT010463.9| Mouse DNA sequence from clone RP23-193M19 on chromosome 12, complete sequence Length = 250364 Score = 63.9 bits (32), Expect = 5e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 27927 tcagcacaatcttctttgtagttttagcctttttgcggaaaataggcttggtctgcccac 27986 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctg 467 | || ||| ||| || | ||||||||| ||||| ||||| Sbjct: 27987 cgtagccactctgtttcctgtcatagcgccgctttccctg 28026
>ref|NM_019865.2| Mus musculus ribosomal protein L36a (Rpl36a), mRNA Length = 457 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 238 tcagcacaatcttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 179 Query: 428 cata 431 |||| Sbjct: 178 cata 175
>gb|BC086777.1| Mus musculus ribosomal protein L36a, mRNA (cDNA clone MGC:102057 IMAGE:6410876), complete cds Length = 447 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| ||| |||||| |||||| ||||| |||| Sbjct: 220 tcagcacaatcttctttgtagttttagcctttttgcggaaaataggcttagtctgcccac 161 Query: 428 cata 431 |||| Sbjct: 160 cata 157
>ref|NM_025589.1| Mus musculus ribosomal protein L36a-like (Rpl36al), mRNA Length = 486 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | || | ||||| ||||| ||||| Sbjct: 292 agcacaatcttctttgtggttttggccttctttcgaaagattggctttgtctgcccaccg 233 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| ||||||||| || ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 232 tagccactctgcttgcgatcgtagcgccgctttccttgggcatacagggaatccttgccc 173 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 172 ttcttatactgggtcactttgtg 150
>gb|AY674230.1| Ixodes pacificus clone IP_7_60_92_138_CLU ribosomal protein L44 mRNA, complete cds Length = 318 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 276 tcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctcttgat 326 |||||||| |||||||||||| ||||| |||||||||||||| | |||||| Sbjct: 300 tcccttgcgcttcttgtctccgccgatctcaaagtgcttgcagcgcttgat 250 Score = 58.0 bits (29), Expect = 3e-05 Identities = 48/53 (90%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 481 tccttacccttcttatactgggtaaccttgtgggagggtgtgcttcttgcact 533 ||||| |||||||| ||||| || ||||||||| ||||||||||||||||||| Sbjct: 95 tccttgcccttcttgtactgcgtcaccttgtgg-agggtgtgcttcttgcact 44 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggcctt 398 ||||||||||||||| || ||||||||||| Sbjct: 207 cagcacaatcttcttggtggtcttggcctt 178
>gb|BC058142.1| Rattus norvegicus large subunit ribosomal protein L36a, mRNA (cDNA clone MGC:72794 IMAGE:6919511), complete cds Length = 523 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | |||| ||||| || || || ||| Sbjct: 297 agcacaatcttctttgtggttttggccttctttcgaaaaattggctttgtttgcccgcca 238 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| |||||| ||||| ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 237 tagccactctgcttccggtcgtagcgccgctttccttgggcatacagggaatccttgccc 178 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 177 ttcttatactgggtcactttgtg 155
>gb|BC019810.1| Mus musculus ribosomal protein L36a-like, mRNA (cDNA clone MGC:30269 IMAGE:5148181), complete cds Length = 501 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | || | ||||| ||||| ||||| Sbjct: 286 agcacaatcttctttgtggttttggccttctttcgaaagattggctttgtctgcccaccg 227 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| ||||||||| || ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 226 tagccactctgcttgcgatcgtagcgccgctttccttgggcatacagggaatccttgccc 167 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 166 ttcttatactgggtcactttgtg 144
>ref|NM_031105.2| Rattus norvegicus large subunit ribosomal protein L36a (Rpl36a), mRNA Length = 507 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | |||| ||||| || || || ||| Sbjct: 294 agcacaatcttctttgtggttttggccttctttcgaaaaattggctttgtttgcccgcca 235 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| |||||| ||||| ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 234 tagccactctgcttccggtcgtagcgccgctttccttgggcatacagggaatccttgccc 175 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 174 ttcttatactgggtcactttgtg 152
>gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, complete sequence Length = 234795 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | || | ||||| ||||| ||||| Sbjct: 91186 agcacaatcttctttgtggttttggccttctttcgaaagattggctttgtctgcccaccg 91245 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| ||||||||| || ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 91246 tagccactctgcttgcgatcgtagcgccgctttccttgggcatacagggaatccttgccc 91305 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 91306 ttcttatactgggtcactttgtg 91328
>ref|XM_538108.2| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a (LOC480987), mRNA Length = 777 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| || |||| | ||||| ||||| |||| Sbjct: 538 tcagcacaatcttctttgtagttttagcctttttccggaagatcggcttagtctgcccac 479 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctgagc 470 |||| ||| |||||| |||||||| || ||||| |||||||| Sbjct: 478 catagccactctgcttccggtcataacgccgctttccctgagc 436
>gb|AC015820.10| Homo sapiens chromosome 11, clone RP11-108G3, complete sequence Length = 165149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| ||||||| ||||| ||||| | |||| Sbjct: 40016 agcacaatcttctttgtggtcttagccttcttctggaaaattggctttgtctgcctacca 39957 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| |||||| | |||||||| | ||| ||||| ||| | | | ||||| ||| Sbjct: 39956 tagccactctgcttctgatcatagcgcctctttccctgggcatacaaggaatccttgccc 39897 Query: 490 ttcttatactg 500 ||||||||||| Sbjct: 39896 ttcttatactg 39886
>dbj|AK153544.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830174F05 product:ribosomal protein L36a-like, full insert sequence Length = 488 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | || | ||||| ||||| ||||| Sbjct: 295 agcacaatcttctttgtggttttggccttctttcgaaagattggctttgtctgcccaccg 236 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| ||||||||| || ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 235 tagccactctgcttgcgatcgtagcgccgctttccttgggcatacagggaatccttgccc 176 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 175 ttcttatactgggtcactttgtg 153
>gb|BC081440.1| Mus musculus ribosomal protein L36a-like, mRNA (cDNA clone MGC:102023 IMAGE:6407930), complete cds Length = 501 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | || | ||||| ||||| ||||| Sbjct: 273 agcacaatcttctttgtggttttggccttctttcgaaagattggctttgtctgcccaccg 214 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| ||||||||| || ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 213 tagccactctgcttgcgatcgtagcgccgctttccttgggcatacagggaatccttgccc 154 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 153 ttcttatactgggtcactttgtg 131
>gb|AC080004.12| Homo sapiens 3q BAC RP11-307O15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 206162 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| ||||||| ||||| ||||| | |||| Sbjct: 156738 agcacaatcttctttgtggtcttagccttcttctggaaaattggctttgtctgcctacca 156797 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| |||||| | |||||||| | ||| ||||| ||| | | | ||||| ||| Sbjct: 156798 tagccactctgcttctgatcatagcgcctctttccctgggcatacaaggaatccttgccc 156857 Query: 490 ttcttatactg 500 ||||||||||| Sbjct: 156858 ttcttatactg 156868
>dbj|AK010629.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410038A03 product:RIBOSOMAL PROTEIN L44 homolog [Homo sapiens], full insert sequence Length = 486 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | || | ||||| ||||| ||||| Sbjct: 292 agcacaatcttctttgtggttttggccttctttcgaaagattggctttgtctgcccaccg 233 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| ||||||||| || ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 232 tagccactctgcttgcgatcgtagcgccgctttccttgggcatacagggaatccttgccc 173 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 172 ttcttatactgggtcactttgtg 150
>dbj|AK003166.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001H08 product:RPL44 PROTEIN homolog [Mus musculus], full insert sequence Length = 473 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | || | ||||| ||||| ||||| Sbjct: 280 agcacaatcttctttgtggttttggccttctttcgaaagattggctttgtctgcccaccg 221 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| ||||||||| || ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 220 tagccactctgcttgcgatcgtagcgccgctttccttgggcatacagggaatccttgccc 161 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 160 ttcttatactgggtcactttgtg 138
>gb|BC058160.1| Homo sapiens ribosomal protein L36a pseudogene, mRNA (cDNA clone MGC:71312 IMAGE:6259908), complete cds Length = 505 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| ||||||| ||||| ||||| | |||| Sbjct: 275 agcacaatcttctttgtggtcttagccttcttctggaaaattggctttgtctgcctacca 216 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| |||||| | |||||||| | ||| ||||| ||| | | | ||||| ||| Sbjct: 215 tagccactctgcttctgatcatagcgcctctttccctgggcatacaaggaatccttgccc 156 Query: 490 ttcttatactg 500 ||||||||||| Sbjct: 155 ttcttatactg 145
>ref|NG_005141.1| Homo sapiens ribosomal protein L36a pseudogene (LOC554234) on chromosome 11 Length = 702 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| ||||||| ||||| ||||| | |||| Sbjct: 375 agcacaatcttctttgtggtcttagccttcttctggaaaattggctttgtctgcctacca 316 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| |||||| | |||||||| | ||| ||||| ||| | | | ||||| ||| Sbjct: 315 tagccactctgcttctgatcatagcgcctctttccctgggcatacaaggaatccttgccc 256 Query: 490 ttcttatactg 500 ||||||||||| Sbjct: 255 ttcttatactg 245
>gb|BC081439.1| Mus musculus ribosomal protein L36a-like, mRNA (cDNA clone MGC:102022 IMAGE:5714114), complete cds Length = 474 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | || | ||||| ||||| ||||| Sbjct: 256 agcacaatcttctttgtggttttggccttctttcgaaagattggctttgtctgcccaccg 197 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| ||||||||| || ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 196 tagccactctgcttgcgatcgtagcgccgctttccttgggcatacagggaatccttgccc 137 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 136 ttcttatactgggtcactttgtg 114
>gb|AF130727.1|AF130727 Chlamydomonas reinhardtii 80S ribosomal protein L41 (RPL41) gene, complete cds Length = 2940 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 ||||||||||||| || ||||| ||||| ||||| || || |||||||||||||| |||| Sbjct: 864 ccttcttgtggaagacgggcttggtctgaccaccgtaacccgactgcttgcggtcgtagc 805 Query: 455 gacgctt 461 | ||||| Sbjct: 804 ggcgctt 798 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 285 cttcttgtctccaccgatttcaaagtgcttgca 317 ||||||||| |||||||| || ||||||||||| Sbjct: 2637 cttcttgtcaccaccgatctcgaagtgcttgca 2605
>gb|BC022706.1| Mus musculus, clone IMAGE:4485773, mRNA Length = 1311 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | || | ||||| ||||| ||||| Sbjct: 1088 agcacaatcttctttgtggttttggccttctttcgaaagattggctttgtctgcccaccg 1029 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| ||||||||| || ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 1028 tagccactctgcttgcgatcgtagcgccgctttccttgggcatacagggaatccttgccc 969 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 968 ttcttatactgggtcactttgtg 946
>gb|AF004672.1|AF004672 Xanthophyllomyces dendrorhous ribosomal protein L41 (L41) gene, complete cds Length = 2552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 378 cttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccaga 437 |||||| || ||||| ||||||||||||||||| ||||| ||||| || || || || || Sbjct: 1595 cttcttggtggtcttagccttcttgtggaaaacgggcttggtctgacctccgtaaccgga 1536 Query: 438 ctgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttcttata 497 |||||| ||||| || || ||||| ||||| || | | | |||||| |||||||| || Sbjct: 1535 ctgctttcggtcgtatcgtcgctttccctgggcgaagatggagtcctttcccttcttgta 1476 Query: 498 ctgggtaacct 508 |||||| |||| Sbjct: 1475 ctgggtcacct 1465
>ref|XM_658693.1| Aspergillus nidulans FGSC A4 60S ribosomal protein L44 (AN6181.2), mRNA Length = 321 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 378 cttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccaga 437 |||||| || |||||||||||||||||||| || ||||| ||||| ||||| || || Sbjct: 201 cttcttggtggtcttggccttcttgtggaagacgggcttggtctgaccaccgtaaccgct 142 Query: 438 ctgcttgcggtcatagcgacgcttcccctg 467 |||||| ||||| || |||||||| ||||| Sbjct: 141 ctgcttccggtcgtaacgacgcttaccctg 112
>emb|CR859457.1| Pongo pygmaeus mRNA; cDNA DKFZp469D0912 (from clone DKFZp469D0912) Length = 609 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| |||||| ||||| ||||| |||||| Sbjct: 293 agcacaatcttctttgtggtcttagccttcttccggaaaattggctttgtctgcccacca 234 Query: 430 ta 431 || Sbjct: 233 ta 232
>ref|XM_500485.1| Yarrowia lipolytica CLIB122, YALI0B04224g predicted mRNA Length = 321 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 378 cttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccaga 437 |||||| || |||||||||||||||||||||| |||| ||||| || || || || || Sbjct: 201 cttcttggtggtcttggccttcttgtggaaaatctgcttggtctgacctccgtaaccgga 142 Query: 438 ctgcttgcggtcatagcgacgcttcccctgagc 470 |||||| ||||| || || ||||| |||||||| Sbjct: 141 ctgctttcggtcgtatcgtcgcttaccctgagc 109
>gb|AF401592.1| Ictalurus punctatus ribosomal protein L36a mRNA, complete cds Length = 412 Score = 58.0 bits (29), Expect = 3e-05 Identities = 138/172 (80%), Gaps = 3/172 (1%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||| ||||||||||| || |||||||| || |||| | ||||||||||||||| | Sbjct: 244 tcagcacgatcttctttgtggttttggcctttttccggaatataggcttcgtctggcctc 185 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttac 487 | || || |||||| | ||| || || | ||| ||||| ||| | ||| |||||| | Sbjct: 184 cgtagccgctctgctttctgtcgtatcgcctcttaccctgggcatacagggagtcctttc 125 Query: 488 ccttcttatactgggtaaccttgtgggagggtg-tgcttcttgcactccttg 538 |||||||||||||||| || ||||| ||| || ||||||||||||| |||| Sbjct: 124 ccttcttatactgggtgactttgtg--aggctggtgcttcttgcacttcttg 75
>ref|NM_213917.1| Sus scrofa ribosomal protein 36A (RPL36A), mRNA Length = 488 Score = 58.0 bits (29), Expect = 3e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || |||||||| |||||| ||||| || || || | Sbjct: 275 tcagcacaatcttctttgtggttttagccttcttccggaaaattggctttgtttgcccgc 216 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttac 487 |||| ||| ||| || || |||||||| | ||| ||||| ||| | ||| ||||| | Sbjct: 215 catagccactctgtttccgatcatagcgcctctttccctgggcatagagggaatccttgc 156 Query: 488 ccttcttatactgggtaaccttgtg 512 |||||||||||||||| || ||||| Sbjct: 155 ccttcttatactgggtcactttgtg 131
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 378 cttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatatccaga 437 |||||| || |||||||||||||||||||||| |||| ||||| || || || || || Sbjct: 561572 cttcttggtggtcttggccttcttgtggaaaatctgcttggtctgacctccgtaaccgga 561513 Query: 438 ctgcttgcggtcatagcgacgcttcccctgagc 470 |||||| ||||| || || ||||| |||||||| Sbjct: 561512 ctgctttcggtcgtatcgtcgcttaccctgagc 561480
>emb|Y09537.1|SSNAGATII Sus scrofa gene encoding beta-1,2-N-acetylglucosaminyltransferase II Length = 5018 Score = 58.0 bits (29), Expect = 3e-05 Identities = 116/145 (80%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || |||||||| |||||| ||||| || || || | Sbjct: 575 tcagcacaatcttctttgtggttttagccttcttccggaaaattggctttgtttgcccgc 634 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttac 487 |||| ||| ||| || || |||||||| | ||| ||||| ||| | ||| ||||| | Sbjct: 635 catagccactctgtttccgatcatagcgcctctttccctgggcatagagggaatccttgc 694 Query: 488 ccttcttatactgggtaaccttgtg 512 |||||||||||||||| || ||||| Sbjct: 695 ccttcttatactgggtcactttgtg 719
>dbj|AB021315.1| Coprinus cinereus genes for tRNA-Thr and L41 ribosomal protein, complete cds Length = 1611 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 395 ccttcttgtggaaaacaggcttcgtctggccaccatatccagactgcttgcggtcatagc 454 ||||||||||||| || ||||| ||||| |||||||| || |||||||| ||||| || | Sbjct: 1213 ccttcttgtggaagacgggcttggtctgaccaccataaccggactgctttcggtcgtaac 1154 Query: 455 gacgcttcccctg 467 | ||||| ||||| Sbjct: 1153 gtcgctttccctg 1141
>dbj|AB000910.1| Sus scrofa mRNA for ribosomal protein, complete cds Length = 488 Score = 58.0 bits (29), Expect = 3e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || |||||||| |||||| ||||| || || || | Sbjct: 275 tcagcacaatcttctttgtggttttagccttcttccggaaaattggctttgtttgcccgc 216 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttac 487 |||| ||| ||| || || |||||||| | ||| ||||| ||| | ||| ||||| | Sbjct: 215 catagccactctgtttccgatcatagcgcctctttccctgggcatagagggaatccttgc 156 Query: 488 ccttcttatactgggtaaccttgtg 512 |||||||||||||||| || ||||| Sbjct: 155 ccttcttatactgggtcactttgtg 131
>ref|XM_852206.1| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a, transcript variant 5 (LOC475808), mRNA Length = 425 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| || |||| | ||||| ||||| |||| Sbjct: 236 tcagcacaatcttctttgtagttttagcctttttccggaagatcggcttagtctgcccac 177 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctg 467 |||| ||| |||||| |||||||| || ||||| ||||| Sbjct: 176 catagccactctgcttccggtcataacgccgctttccctg 137
>ref|XM_852164.1| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a, transcript variant 4 (LOC475808), mRNA Length = 417 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| || |||| | ||||| ||||| |||| Sbjct: 236 tcagcacaatcttctttgtagttttagcctttttccggaagatcggcttagtctgcccac 177 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctg 467 |||| ||| |||||| |||||||| || ||||| ||||| Sbjct: 176 catagccactctgcttccggtcataacgccgctttccctg 137
>ref|XM_852126.1| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a, transcript variant 3 (LOC475808), mRNA Length = 418 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| || |||| | ||||| ||||| |||| Sbjct: 236 tcagcacaatcttctttgtagttttagcctttttccggaagatcggcttagtctgcccac 177 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctg 467 |||| ||| |||||| |||||||| || ||||| ||||| Sbjct: 176 catagccactctgcttccggtcataacgccgctttccctg 137
>ref|XM_533017.2| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a, transcript variant 1 (LOC475808), mRNA Length = 421 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| || |||| | ||||| ||||| |||| Sbjct: 236 tcagcacaatcttctttgtagttttagcctttttccggaagatcggcttagtctgcccac 177 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctg 467 |||| ||| |||||| |||||||| || ||||| ||||| Sbjct: 176 catagccactctgcttccggtcataacgccgctttccctg 137
>ref|XM_843720.1| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a, transcript variant 2 (LOC475808), mRNA Length = 428 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| || |||| | ||||| ||||| |||| Sbjct: 236 tcagcacaatcttctttgtagttttagcctttttccggaagatcggcttagtctgcccac 177 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctg 467 |||| ||| |||||| |||||||| || ||||| ||||| Sbjct: 176 catagccactctgcttccggtcataacgccgctttccctg 137
>ref|XM_446620.1| Candida glabrata CBS138, CAGL0G05940g partial mRNA Length = 378 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatat 432 |||| |||||| || ||||| || |||||||||||||||||||| || || ||||| | Sbjct: 263 acaaccttcttggtagtcttagctttcttgtggaaaacaggcttagtttgaccaccgaaa 204 Query: 433 ccagactgcttgcggtcata 452 ||||| ||||| |||||||| Sbjct: 203 ccagattgcttacggtcata 184
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatat 432 |||| |||||| || ||||| || |||||||||||||||||||| || || ||||| | Sbjct: 572719 acaaccttcttggtagtcttagctttcttgtggaaaacaggcttagtttgaccaccgaaa 572660 Query: 433 ccagactgcttgcggtcata 452 ||||| ||||| |||||||| Sbjct: 572659 ccagattgcttacggtcata 572640
>dbj|AK157158.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830205H16 product:dystrobrevin, beta, full insert sequence Length = 3686 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| | | |||||| |||||| ||||| |||| Sbjct: 3068 tcagcacaatcttctttgtagttttagccttttagcggaaaataggcttggtctgcccac 3127 Query: 428 cata 431 |||| Sbjct: 3128 cata 3131
>gb|AC155273.3| Mus musculus BAC clone RP23-36K2 from chromosome 12, complete sequence Length = 198927 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| | | |||||| |||||| ||||| |||| Sbjct: 171235 tcagcacaatcttctttgtagttttagccttttagcggaaaataggcttggtctgcccac 171294 Query: 428 cata 431 |||| Sbjct: 171295 cata 171298
>gb|AC034247.4|AC034247 Homo sapiens chromosome 5 clone RP11-343P16, complete sequence Length = 171482 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| ||||| ||||| ||||| |||||| Sbjct: 109963 agcacaatcttctttgtggtcttagccttcttccagaaaattggctttgtctgcccacca 109904 Query: 430 tatccagactgcttgcggtcatag 453 || ||| |||||| || |||||| Sbjct: 109903 tagccactctgcttccgatcatag 109880
>dbj|AB000425.2| Sus scrofa genes for endopeptidase 24.16 type M1, endopeptidase 24.16 type M2, endopeptidase 24.16 type M3, ribosomal protein retropseudogene(pseudo), complete cds Length = 8180 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| || |||||| ||||| ||||| |||| Sbjct: 6478 tcagcacaatcttctttgtagttttagcctttttccggaaaattggcttagtctgcccac 6537 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctg 467 |||| ||| |||||| | |||||| || ||||| ||||| Sbjct: 6538 catagccactctgcttcctgtcataacgccgctttccctg 6577
>gb|AC026753.5|AC026753 Homo sapiens chromosome 5 clone RP11-72L14, complete sequence Length = 148491 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| ||||| |||||||| ||||| ||||| ||||| |||||| Sbjct: 80145 agcacaatcttctttgtggtcttagccttcttccagaaaattggctttgtctgcccacca 80086 Query: 430 tatccagactgcttgcggtcatag 453 || ||| |||||| || |||||| Sbjct: 80085 tagccactctgcttccgatcatag 80062
>ref|NM_214359.1| Sus scrofa soluble angiotesin-binding protein (NLN), mRNA Length = 4825 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| || |||||| ||||| ||||| |||| Sbjct: 3123 tcagcacaatcttctttgtagttttagcctttttccggaaaattggcttagtctgcccac 3182 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctg 467 |||| ||| |||||| | |||||| || ||||| ||||| Sbjct: 3183 catagccactctgcttcctgtcataacgccgctttccctg 3222
>emb|AJ605265.1| Platichthys flesus partial mRNA for ribosomal protein L36A (rpl36A gene) Length = 321 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 ||||||||||||||| ||||| |||||||| |||||| |||||| | ||| || ||||| Sbjct: 201 cacaatcttctttgtagtcttagccttctttcggaaaataggcttggcctgacccccata 142 Query: 432 tccagactgctt 443 || |||||||| Sbjct: 141 gccggactgctt 130 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aagtgcttgcacctcttgat 326 |||||||||||||||||||| Sbjct: 272 aagtgcttgcacctcttgat 253
>emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete sequence Length = 251037 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| | | |||||| |||||| ||||| |||| Sbjct: 221275 tcagcacaatcttctttgtagttttagccttttagcggaaaataggcttggtctgcccac 221216 Query: 428 cata 431 |||| Sbjct: 221215 cata 221212
>dbj|D67040.1|YSARPL41 Candida utilis DNA for ribosomal protein L41, complete cds Length = 2086 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccatat 432 |||| |||||| || || || ||||| ||||||||||| ||||| || || ||||| || Sbjct: 1683 acaaccttcttggtggttttagcctttttgtggaaaactggcttggtttgaccaccgtaa 1624 Query: 433 ccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttacccttc 492 || || ||||| |||||||| |||||||| ||||| ||| | ||| ||||||| | Sbjct: 1623 ccggattgcttacggtcataacgacgcttaccctgggcaaagagggaagccttaccagcc 1564 Query: 493 ttatactgggtaaccttgtg 512 || ||||||||||||||||| Sbjct: 1563 ttgtactgggtaaccttgtg 1544
>dbj|D11336.1|PIGSABP Sus scrofa mRNA for soluble angiotesin-binding protein, complete cds Length = 3819 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| || |||||| ||||| ||||| |||| Sbjct: 3108 tcagcacaatcttctttgtagttttagcctttttccggaaaattggcttagtctgcccac 3167 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctg 467 |||| ||| |||||| | |||||| || ||||| ||||| Sbjct: 3168 catagccactctgcttcctgtcataacgccgctttccctg 3207
>gb|BC078555.1| Xenopus laevis MGC85428 protein, mRNA (cDNA clone MGC:85428 IMAGE:6934581), complete cds Length = 427 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccaccata 431 |||||||||||||| ||||| |||||||| ||||| ||||| |||||||||||||| Sbjct: 230 acaatcttctttgtggtcttagccttctttctgaaaattggcttggtctggccaccata 172
>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence Length = 197482 Score = 54.0 bits (27), Expect = 5e-04 Identities = 114/143 (79%) Strand = Plus / Plus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || ||||||||||| | || | ||||| ||||| ||||| Sbjct: 112064 agcacaatcttctttgtggttttggccttctttcgaaagattggctttgtctgcccaccg 112123 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctgagcagaaaggctgtccttaccc 489 || ||| ||||||||| | ||||| ||||| || || ||| | ||| ||||| ||| Sbjct: 112124 tagccactctgcttgcgaccgtagcgccgctttccttgggcatacagggaatccttgccc 112183 Query: 490 ttcttatactgggtaaccttgtg 512 |||||||||||||| || ||||| Sbjct: 112184 ttcttatactgggtcactttgtg 112206
>ref|XM_751917.1| Ustilago maydis 521 hypothetical protein (UM00863.1) partial mRNA Length = 1101 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 378 cttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacc 428 |||||| || |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 981 cttcttggtggtcttggccttcttgtggaagacgggcttggtctgaccacc 931
>ref|XM_938903.1| PREDICTED: Homo sapiens similar to large subunit ribosomal protein L36a (LOC649839), mRNA Length = 383 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacc 428 |||||||||||||||||| || || ||||| || |||||| ||||| ||||| ||||| Sbjct: 204 cagcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtctgcccacc 145 Query: 429 atatccagactgcttgcggtcatagcgacgcttcccctg 467 ||| ||| |||||| | |||||| || | ||||||||| Sbjct: 144 atagccactctgcttcctgtcataacgccacttcccctg 106
>gb|AC139143.5| Homo sapiens chromosome 11, clone CTD-3008O6, complete sequence Length = 55001 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 369 cagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacc 428 |||||||||||||||||| || || ||||| || |||||| ||||| ||||| ||||| Sbjct: 51927 cagcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtctgcccacc 51986 Query: 429 atatccagactgcttgcggtcatagcgacgcttcccctg 467 ||| ||| |||||| | |||||| || | ||||||||| Sbjct: 51987 atagccactctgcttcctgtcataacgccacttcccctg 52025
>gb|AC068580.23| Homo sapiens chromosome 11, clone RP11-295K3, complete sequence Length = 120298 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 369 cagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacc 428 |||||||||||||||||| || || ||||| || |||||| ||||| ||||| ||||| Sbjct: 14584 cagcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtctgcccacc 14643 Query: 429 atatccagactgcttgcggtcatagcgacgcttcccctg 467 ||| ||| |||||| | |||||| || | ||||||||| Sbjct: 14644 atagccactctgcttcctgtcataacgccacttcccctg 14682
>dbj|D10577.1|YSARIMC Candida maltosa RIM-C gene for ribosomal protein L41, complete cds Length = 1141 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 363 caacttcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctg 422 |||||||| |||||||||||| || || || |||||||| |||||||| |||| || || Sbjct: 576 caacttcaacacaatcttcttagtcgttttagccttcttatggaaaacttgctttgtttg 517 Query: 423 gccaccatatccaga 437 |||||||| ||||| Sbjct: 516 accaccatacccaga 502
>gb|DQ216135.1| Taeniopygia guttata clone 0058P0024G08 ribosomal protein L36A-like mRNA, complete sequence Length = 415 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttctt 401 |||||||||||||||| || |||||||||||||| Sbjct: 224 tcagcacaatcttcttggtggtcttggccttctt 191 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 285 cttcttgtctccaccgatttcaaagtgcttgcacctctt 323 |||||||||||| || | |||||||||||||||||||| Sbjct: 313 cttcttgtctcctcccagctcaaagtgcttgcacctctt 275
>emb|AM049154.1| Eucinetus sp. APV-2005 mRNA for ribosomal protein L44e (rpL44e gene) Length = 315 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 276 tcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctcttga 325 |||||||| ||||||||||| || | ||| ||||||||||||||||||| Sbjct: 297 tcccttgcgtttcttgtctcctccaagttcgaagtgcttgcacctcttga 248
>ref|XM_968530.1| PREDICTED: Tribolium castaneum similar to CG7424-PA (LOC662436), mRNA Length = 399 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 276 tcccttgcccttcttgtctccaccgatttcaaagtgcttgca 317 |||||||| ||||||||| ||||| | ||||||||||||||| Sbjct: 339 tcccttgcgcttcttgtcgccacccaattcaaagtgcttgca 298
>ref|NM_135335.2| Drosophila melanogaster Ribosomal protein L36A CG7424-RA (RpL36A), mRNA Length = 469 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggccttctt 401 ||||||||||||||| || |||||||||||||| Sbjct: 235 cagcacaatcttcttggtggtcttggccttctt 203
>gb|BT024261.1| Drosophila melanogaster IP15820 full insert cDNA Length = 511 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggccttctt 401 ||||||||||||||| || |||||||||||||| Sbjct: 256 cagcacaatcttcttggtggtcttggccttctt 224
>ref|XM_344962.2| PREDICTED: Rattus norvegicus similar to IL-27 p28 subunit (LOC365368), mRNA Length = 1236 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || |||| |||||||||| ||||| ||||| |||| Sbjct: 217 tcagcacaatcttctttgtagttttatcctttttgtggaaaatgggcttagtctgcccac 158 Query: 428 c 428 | Sbjct: 157 c 157
>gb|M62395.1|YSRQLAF Pichia sp. ribosomal protein L41 gene, complete cds Length = 1048 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggctt 416 ||||| |||||| || |||||||| |||||||||||||| ||||| Sbjct: 945 cacaaccttcttggtagtcttggctttcttgtggaaaacgggctt 901
>dbj|D10153.1|YSRPGL41 Pichia guilliermondii PGL41 gene for ribosomal protein L41, partial cds Length = 1048 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 372 cacaatcttctttgttgtcttggccttcttgtggaaaacaggctt 416 ||||| |||||| || |||||||| |||||||||||||| ||||| Sbjct: 945 cacaaccttcttggtagtcttggctttcttgtggaaaacgggctt 901
>gb|AY769307.1| Bombyx mori ribosomal protein L36A (RpL36A) mRNA, complete cds Length = 397 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 276 tcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctctt 323 |||||| | ||||||||| ||||||| |||||||||||||| ||||| Sbjct: 318 tccctttctcttcttgtcaccaccgagctcaaagtgcttgcatctctt 271
>ref|XM_864389.1| PREDICTED: Bos taurus similar to large subunit ribosomal protein L36a (LOC613520), mRNA Length = 386 Score = 48.1 bits (24), Expect = 0.031 Identities = 54/64 (84%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 |||| |||||||||||||| || || ||||| || ||||||| ||||| ||||| |||| Sbjct: 215 tcagtacaatcttctttgtagttttagcctttttccggaaaactggcttagtctgcccac 156 Query: 428 cata 431 |||| Sbjct: 155 cata 152
>gb|AC156985.12| Mus musculus chromosome 7, clone RP23-417L14, complete sequence Length = 179492 Score = 48.1 bits (24), Expect = 0.031 Identities = 54/64 (84%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||| | ||| ||||| |||||| ||||| |||| Sbjct: 57267 tcagcacaatcttctttgtagttttagccattttgcagaaaataggcttagtctgcccac 57326 Query: 428 cata 431 |||| Sbjct: 57327 cata 57330
>emb|AM049158.1| Scarabaeus laticollis mRNA for ribosomal protein L44e (rpL44e gene) Length = 315 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 276 tcccttgcccttcttgtctccaccgatttcaaagtgcttgcacctctt 323 |||||||| |||||||| ||||| | |||||||||||||||||||| Sbjct: 297 tcccttgcgtttcttgtcrccacccaactcaaagtgcttgcacctctt 250
>ref|XM_773573.1| Giardia lamblia ATCC 50803 ribosomal protein L44 (GLP_158_62913_63233) partial mRNA Length = 321 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Minus Query: 378 cttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 |||||||||||||||||||||| || |||| | ||||| ||||| |||||| Sbjct: 195 cttctttgttgtcttggccttcctgcggaagatgggcttggtctgaccacca 144
>emb|X92517.1|SCORFSC14 S.cerevisiae PSD1, N1696, SKO1, N1706, N1710, N1714, N1718, SCL41A, N1727, YGP1, N1735, N1739, N1743, N1747, N1751, YCK2, N1761, N1765, RPC31, N1773, N1774, N1777, N1780, N1785, N1790 genes Length = 36813 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggctt 416 |||| |||||| || ||||| || |||||||||||||||||||| Sbjct: 14891 acaaccttcttggtagtcttagctttcttgtggaaaacaggctt 14848
>emb|Z71438.1|SCYNL162W S.cerevisiae chromosome XIV reading frame ORF YNL162w Length = 2523 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggctt 416 |||| |||||| || ||||| || |||||||||||||||||||| Sbjct: 1966 acaaccttcttggtagtcttagctttcttgtggaaaacaggctt 1923
>gb|DQ331962.1| Synthetic construct Saccharomyces cerevisiae clone FLH201068.01X RPL42B gene, complete sequence Length = 762 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggctt 416 |||| |||||| || ||||| || |||||||||||||||||||| Sbjct: 647 acaaccttcttggtagtcttagctttcttgtggaaaacaggctt 604
>gb|AC162521.4| Mus musculus chromosome 7, clone RP23-356O13, complete sequence Length = 207307 Score = 48.1 bits (24), Expect = 0.031 Identities = 54/64 (84%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||| | ||| ||||| |||||| ||||| |||| Sbjct: 16232 tcagcacaatcttctttgtagttttagccattttgcagaaaataggcttagtctgcccac 16173 Query: 428 cata 431 |||| Sbjct: 16172 cata 16169
>gb|AY610296.1| Sus scrofa clone rcsk24_h11.y1.abd, mRNA sequence Length = 435 Score = 48.1 bits (24), Expect = 0.031 Identities = 81/100 (81%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||||| || |||||| || || ||||| |||| Sbjct: 228 tcagcacaatcttctttgtagttttagcctttttccggaaaattggtttagtctgcccac 169 Query: 428 catatccagactgcttgcggtcatagcgacgcttcccctg 467 |||| ||| |||||| | |||||| || ||||| ||||| Sbjct: 168 catagccactctgcttcctgtcataacgccgctttccctg 129
>gb|AC120846.16| Mus musculus chromosome 7, clone RP24-317L6, complete sequence Length = 192429 Score = 48.1 bits (24), Expect = 0.031 Identities = 54/64 (84%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| || || ||| | ||| ||||| |||||| ||||| |||| Sbjct: 110688 tcagcacaatcttctttgtagttttagccattttgcagaaaataggcttagtctgcccac 110747 Query: 428 cata 431 |||| Sbjct: 110748 cata 110751
>gb|U10398.3|YSCH9315 Saccharomyces cerevisiae chromosome VIII cosmid 9315 Length = 30351 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggctt 416 |||| |||||| || ||||| || |||||||||||||||||||| Sbjct: 28903 acaaccttcttggtagtcttagctttcttgtggaaaacaggctt 28946
>dbj|D10579.1|YSCSCL41B Saccharomyces cerevisiae SCL41b gene for ribosomal protein L41b, complete cds Length = 1823 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggctt 416 |||| |||||| || ||||| || |||||||||||||||||||| Sbjct: 875 acaaccttcttggtagtcttagctttcttgtggaaaacaggctt 832
>dbj|D10578.1|YSCSCL41A Saccharomyces cerevisiae SCL41a gene for ribosomal protein L41a, complete cds Length = 1975 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaacaggctt 416 |||| |||||| || ||||| || |||||||||||||||||||| Sbjct: 1097 acaaccttcttggtagtcttagctttcttgtggaaaacaggctt 1054
>gb|AC153889.19| Mus musculus 10 BAC RP23-434A12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190042 Score = 46.1 bits (23), Expect = 0.12 Identities = 54/63 (85%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtctt-ggccttcttgtggaaaacaggcttcgtctggcca 426 ||||||||||||||| ||| || || ||||| |||||||||| |||||| ||||| ||| Sbjct: 188662 tcagcacaatcttctatgtagttttaagcctttttgtggaaaataggcttagtctgccca 188721 Query: 427 cca 429 ||| Sbjct: 188722 cca 188724
>gb|AC183538.4| Pan troglodytes BAC clone CH251-395P17 from chromosome x, complete sequence Length = 186120 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| ||||| |||||| Sbjct: 124608 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtctgcccacca 124549 Query: 430 tatccagactgcttgcggtcata 452 || ||| |||||| | |||||| Sbjct: 124548 tagccactctgcttcctgtcata 124526
>gb|AC126071.5| Rattus norvegicus 10 BAC CH230-209B21 (Children's Hospital Oakland Research Institute) complete sequence Length = 227741 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctg 422 ||||||||||||||||||| || || ||||| ||| |||||| ||||| ||||| Sbjct: 189178 tcagcacaatcttctttgtagttttagcctttttgcggaaaatgggcttagtctg 189124
>ref|XM_792463.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7424-PA (LOC592965), partial mRNA Length = 258 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 |||| ||||||||||| || |||||||||||||| |||| | ||| || ||||| || | Sbjct: 169 tcagtacaatcttcttggtggtcttggccttctttcggaagataggtttggtctgtcctc 110 Query: 428 catatcc 434 ||||||| Sbjct: 109 catatcc 103
>gb|AC011476.8| Homo sapiens chromosome 19 clone CTC-550B14, complete sequence Length = 187064 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| ||||| |||||| Sbjct: 76756 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtctgcccacca 76697 Query: 430 tatccagactgcttgcggtcata 452 || ||| |||||| | |||||| Sbjct: 76696 tagccactctgcttcctgtcata 76674
>gb|AC023194.9| Homo sapiens, clone RP11-216N21, complete sequence Length = 175834 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 364 aacttcagcacaatcttctttgttgtcttggcctt 398 ||||| ||||||||||||||||| || |||||||| Sbjct: 43017 aactttagcacaatcttctttgtagttttggcctt 42983
>gb|AC127185.3| Rattus norvegicus BAC CH230-28E5 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 233648 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctg 422 ||||||||||||||||||| || || ||||| ||| |||||| ||||| ||||| Sbjct: 170526 tcagcacaatcttctttgtagttttagcctttttgcggaaaatgggcttagtctg 170580
>ref|XM_214958.1| PREDICTED: Rattus norvegicus ribosomal protein L36a (predicted) (Rpl36a_predicted), mRNA Length = 631 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctg 422 ||||||||||||||||||| || || ||||| ||| |||||| ||||| ||||| Sbjct: 217 tcagcacaatcttctttgtagttttagcctttttgcggaaaatgggcttagtctg 163
>ref|XM_343925.1| PREDICTED: Rattus norvegicus similar to large subunit ribosomal protein L36a (LOC363636), mRNA Length = 321 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctg 422 ||||||||||||||||||| || || ||||| ||| |||||| ||||| ||||| Sbjct: 205 tcagcacaatcttctttgtagttttagcctttttgcggaaaatgggcttagtctg 151
>ref|XM_574947.1| PREDICTED: Rattus norvegicus similar to large subunit ribosomal protein L36a (LOC499622), mRNA Length = 381 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctg 422 ||||||||||||||||||| || || ||||| ||| |||||| ||||| ||||| Sbjct: 225 tcagcacaatcttctttgtagttttagcctttttgcggaaaatgggcttagtctg 171
>emb|BX005415.5| Zebrafish DNA sequence from clone DKEY-21I5 in linkage group 5, complete sequence Length = 243510 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 183 cagaaatttaaagataatacatt 205 ||||||||||||||||||||||| Sbjct: 72703 cagaaatttaaagataatacatt 72681
>gb|AC171183.6| Mus musculus BAC RP24-545B2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 211697 Score = 46.1 bits (23), Expect = 0.12 Identities = 54/63 (85%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 368 tcagcacaatcttctttgttgtctt-ggccttcttgtggaaaacaggcttcgtctggcca 426 ||||||||||||||| ||| || || ||||| |||||||||| |||||| ||||| ||| Sbjct: 141614 tcagcacaatcttctatgtagttttaagcctttttgtggaaaataggcttagtctgccca 141673 Query: 427 cca 429 ||| Sbjct: 141674 cca 141676
>emb|X04345.1|DMSUF4 Drosophila suffix sequence from gene CG208 Length = 535 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggccttc 399 ||||||||||||||| || |||||||||||| Sbjct: 141 cagcacaatcttcttggtggtcttggccttc 111
>emb|X04344.1|DMSUF3 Drosophila suffix sequence from gene AG208 Length = 744 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggccttc 399 ||||||||||||||| || |||||||||||| Sbjct: 38 cagcacaatcttcttggtggtcttggccttc 8
>emb|X04342.1|DMSUF1 Drosophila mRNA (C-terminal) with suffix sequence (C208) Length = 377 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggccttc 399 ||||||||||||||| || |||||||||||| Sbjct: 179 cagcacaatcttcttggtggtcttggccttc 149
>gb|M54973.1|DROSUFFIXD Drosophila melanogaster CG208 gene, suffix sequence Length = 535 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggccttc 399 ||||||||||||||| || |||||||||||| Sbjct: 141 cagcacaatcttcttggtggtcttggccttc 111
>gb|M54972.1|DROSUFFIXC Drosophila melanogaster AG208 gene, suffix sequence Length = 744 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggccttc 399 ||||||||||||||| || |||||||||||| Sbjct: 38 cagcacaatcttcttggtggtcttggccttc 8
>gb|M54970.1|DROSUFFIXA Drosophila melanogaster (clone C208) suffix sequence mRNA Length = 377 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggccttc 399 ||||||||||||||| || |||||||||||| Sbjct: 179 cagcacaatcttcttggtggtcttggccttc 149
>gb|AY305871.1| Homo sapiens migration-inducing protein 6 (MIG6) mRNA, complete cds Length = 827 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 623 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 564 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 563 tagccactctgcttcctgtcataacgccgctttccctg 526
>ref|XM_521180.1| PREDICTED: Pan troglodytes similar to large subunit ribosomal protein L36a (LOC465760), mRNA Length = 526 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 359 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 300 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 299 tagccactctgcttcctgtcataacgccgctttccctg 262
>ref|NM_021029.4| Homo sapiens ribosomal protein L36a (RPL36A), mRNA Length = 469 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 287 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 228 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 227 tagccactctgcttcctgtcataacgccgctttccctg 190
>gb|AC162037.2| Mus musculus chromosome 8, clone RP23-35K23, complete sequence Length = 241548 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 ttataaccagaaatttaaagat 197 |||||||||||||||||||||| Sbjct: 26656 ttataaccagaaatttaaagat 26635
>gb|BC070204.1| Homo sapiens ribosomal protein L36a, mRNA (cDNA clone MGC:88185 IMAGE:4774945), complete cds Length = 425 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 232 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 173 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 172 tagccactctgcttcctgtcataacgccgctttccctg 135
>gb|BC031015.1| Homo sapiens ribosomal protein L36a, mRNA (cDNA clone MGC:32772 IMAGE:4659712), complete cds Length = 429 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 235 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 176 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 175 tagccactctgcttcctgtcataacgccgctttccctg 138
>gb|BC001781.1| Homo sapiens ribosomal protein L36a, mRNA (cDNA clone MGC:2064 IMAGE:3353669), complete cds Length = 425 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 243 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 184 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 183 tagccactctgcttcctgtcataacgccgctttccctg 146
>gb|AC125259.8| Mus musculus chromosome 19, clone RP24-202G16, complete sequence Length = 159753 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 487 cccttcttatactgggtaaccttgtg 512 |||||||||||||||||||| ||||| Sbjct: 129609 cccttcttatactgggtaactttgtg 129584
>gb|AC183550.3| Pan troglodytes BAC clone CH251-48C10 from chromosome 7, complete sequence Length = 163417 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Plus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || ||||||| ||||| |||| |||||| Sbjct: 154016 agcacaatcttctttgtagttttagcctttttctggaaaattggcttagtctccccacca 154075 Query: 430 ta 431 || Sbjct: 154076 ta 154077
>emb|AM049152.1| Curculio glandium mRNA for ribosomal protein L44e (rpL44e gene) Length = 315 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 286 ttcttgtctccaccgatttcaaagtgcttgcacctctt 323 |||||||| || || | ||||||||||||||||||||| Sbjct: 287 ttcttgtcacctccaagttcaaagtgcttgcacctctt 250
>gb|AC116533.11| Homo sapiens chromosome 11, clone RP11-466H18, complete sequence Length = 189143 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 181187 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 181128 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 181127 tagccactctgcttcctgtcataacgccgctttccctg 181090
>gb|AC004938.3| Homo sapiens PAC clone RP5-971C3 from 7, complete sequence Length = 88029 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || ||||||| ||||| |||| |||||| Sbjct: 78064 agcacaatcttctttgtagttttagcctttttctggaaaattggcttagtctccccacca 78005 Query: 430 ta 431 || Sbjct: 78004 ta 78003
>ref|NM_001005095.1| Xenopus tropicalis ribosomal protein L36A (MGC89834), mRNA Length = 414 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 285 cttcttgtctccaccgatttcaaagtgcttgcacctcttgat 326 ||||||||| || || | ||||||||||||||| |||||||| Sbjct: 319 cttcttgtcccctcccaattcaaagtgcttgcatctcttgat 278 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttctt 401 |||||||||||||| ||||| |||||||| Sbjct: 225 acaatcttctttgtggtcttagccttctt 197
>gb|BC077026.1| Xenopus tropicalis ribosomal protein L36A, mRNA (cDNA clone MGC:89834 IMAGE:7028718), complete cds Length = 414 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 285 cttcttgtctccaccgatttcaaagtgcttgcacctcttgat 326 ||||||||| || || | ||||||||||||||| |||||||| Sbjct: 319 cttcttgtcccctcccaattcaaagtgcttgcatctcttgat 278 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttctt 401 |||||||||||||| ||||| |||||||| Sbjct: 225 acaatcttctttgtggtcttagccttctt 197
>emb|CR617894.1| full-length cDNA clone CS0DI062YC10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 366 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 201 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 142 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 141 tagccactctgcttcctgtcataacgccgctttccctg 104
>emb|CR612724.1| full-length cDNA clone CS0DC001YE07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 355 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 190 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 131 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 130 tagccactctgcttcctgtcataacgccgctttccctg 93
>emb|CR611948.1| full-length cDNA clone CS0DD002YK13 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 390 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 225 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 166 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 165 tagccactctgcttcctgtcataacgccgctttccctg 128
>ref|XM_929985.1| PREDICTED: Homo sapiens similar to large subunit ribosomal protein L36a (LOC644889), mRNA Length = 490 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 298 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 239 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 238 tagccactctgcttcctgtcataacgccgctttccctg 201
>gb|DQ317826.1| Palola sp. AS-2005 isolate Kosrae161 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 608 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 ttcccttgcccttcttgtctcc 296 |||||||||||||||||||||| Sbjct: 227 ttcccttgcccttcttgtctcc 248
>emb|CR542198.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0924D for gene RPL36A, ribosomal protein L36a; complete cds, without stopcodon Length = 318 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 203 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 144 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 143 tagccactctgcttcctgtcataacgccgctttccctg 106
>gb|AC146064.4| Pan troglodytes BAC clone RP43-59B14 from chromosome 7, complete sequence Length = 186687 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Plus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || ||||||| ||||| |||| |||||| Sbjct: 41231 agcacaatcttctttgtagttttagcctttttctggaaaattggcttagtctccccacca 41290 Query: 430 ta 431 || Sbjct: 41291 ta 41292
>gb|BC062219.1| Homo sapiens ribosomal protein L36a, mRNA (cDNA clone MGC:72020 IMAGE:6726961), complete cds Length = 456 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Minus Query: 370 agcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccacca 429 ||||||||||||||||| || || ||||| || |||||| ||||| || || |||||| Sbjct: 268 agcacaatcttctttgtagttttagcctttttccggaaaatcggcttagtttgcccacca 209 Query: 430 tatccagactgcttgcggtcatagcgacgcttcccctg 467 || ||| |||||| | |||||| || ||||| ||||| Sbjct: 208 tagccactctgcttcctgtcataacgccgctttccctg 171
>gb|AC016791.23| Mus musculus chromosome 19, clone RP23-187B17, complete sequence Length = 172942 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 487 cccttcttatactgggtaaccttgtg 512 |||||||||||||||||||| ||||| Sbjct: 132226 cccttcttatactgggtaactttgtg 132251
>gb|AC120162.6| Mus musculus chromosome 8, clone RP24-456M18, complete sequence Length = 190755 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 ttataaccagaaatttaaagat 197 |||||||||||||||||||||| Sbjct: 71141 ttataaccagaaatttaaagat 71120
>emb|CR942739.2| Xenopus tropicalis finished cDNA, clone TNeu070k14 Length = 490 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 285 cttcttgtctccaccgatttcaaagtgcttgcacctcttgat 326 ||||||||| || || | ||||||||||||||| |||||||| Sbjct: 308 cttcttgtcccctcccaattcaaagtgcttgcatctcttgat 267 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttctt 401 |||||||||||||| ||||| |||||||| Sbjct: 214 acaatcttctttgtggtcttagccttctt 186
>emb|CR926212.1| Xenopus tropicalis finished cDNA, clone TNeu141f09 Length = 372 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 285 cttcttgtctccaccgatttcaaagtgcttgcacctcttgat 326 ||||||||| || || | ||||||||||||||| |||||||| Sbjct: 297 cttcttgtcccctcccaattcaaagtgcttgcatctcttgat 256 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 373 acaatcttctttgttgtcttggccttctt 401 |||||||||||||| ||||| |||||||| Sbjct: 203 acaatcttctttgtggtcttagccttctt 175
>emb|AL935164.6| Zebrafish DNA sequence from clone CH211-190N9, complete sequence Length = 170403 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 184 agaaatttaaagataatacatt 205 |||||||||||||||||||||| Sbjct: 118781 agaaatttaaagataatacatt 118760
>gb|AC172160.3| Pan troglodytes chromosome X clone PTB-96F20 map human otholog p11.4, complete sequence Length = 203345 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 tataaccagaaatttaaagat 197 ||||||||||||||||||||| Sbjct: 157494 tataaccagaaatttaaagat 157514
>ref|NM_001039590.1| Homo sapiens ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant 3, mRNA Length = 12401 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 tataaccagaaatttaaagat 197 ||||||||||||||||||||| Sbjct: 11093 tataaccagaaatttaaagat 11113
>ref|NM_001039591.1| Homo sapiens ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant 4, mRNA Length = 12353 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 tataaccagaaatttaaagat 197 ||||||||||||||||||||| Sbjct: 11045 tataaccagaaatttaaagat 11065
>emb|Z50109.1|CEC09H10 Caenorhabditis elegans Cosmid C09H10, complete sequence Length = 40453 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 481 tccttacccttcttatactgggtaaccttgtgg 513 ||||| |||||||| || ||||||||||||||| Sbjct: 25570 tcctttcccttcttgtattgggtaaccttgtgg 25602
>ref|XM_743928.1| Aspergillus fumigatus Af293 C6 transcription factor (Afu7g04890) partial mRNA Length = 2112 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gtcgacacaattgcaaaacaa 54 ||||||||||||||||||||| Sbjct: 739 gtcgacacaattgcaaaacaa 759 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 gtcgacacaattgcaaaacaa 105 ||||||||||||||||||||| Sbjct: 739 gtcgacacaattgcaaaacaa 759 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gtcgacacaattgcaaaacaa 156 ||||||||||||||||||||| Sbjct: 739 gtcgacacaattgcaaaacaa 759
>gb|AY231644.1| Drosophila yakuba clone yak-em_CG7424 mRNA sequence Length = 309 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 369 cagcacaatcttctttgttgtcttggccttctt 401 ||||||||||||||| || ||||| |||||||| Sbjct: 201 cagcacaatcttcttggtggtcttagccttctt 169
>gb|AC093578.3| Homo sapiens chromosome 1 clone RP11-76N22, complete sequence Length = 164453 Score = 42.1 bits (21), Expect = 1.9 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand = Plus / Minus Query: 368 tcagcacaatcttctttgttgtcttggccttcttgtggaaaacaggcttcgtctggccac 427 ||||||||||||||||||| | || ||||| |||| |||||| |||| ||||| |||| Sbjct: 83223 tcagcacaatcttctttgtacttttagcctt-ttgtagaaaaccagcttagtctgcccac 83165 Query: 428 catatccagactgcttgcggtcata 452 |||| ||| |||||| | |||||| Sbjct: 83164 catagccactctgcttcctgtcata 83140
>emb|AL109797.18|HS1172N10 Human DNA sequence from clone RP5-1172N10 on chromosome Xp11.3-11.4 Contains the 3' end of the USP9X gene for X chromosome ubiquitin specific protease 9 (fat facets-like Drosophila), a novel gene and a CpG island, complete sequence Length = 129293 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 tataaccagaaatttaaagat 197 ||||||||||||||||||||| Sbjct: 60941 tataaccagaaatttaaagat 60961
>gb|AC128768.4| Rattus norvegicus 1 BAC CH230-445L3 (Children's Hospital Oakland Research Institute) complete sequence Length = 156228 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 480 gtccttacccttcttatactgggtaaccttgtg 512 |||||| |||||||||||||| ||||| ||||| Sbjct: 47486 gtccttgcccttcttatactgagtaactttgtg 47518 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 373 acaatcttctttgttgtcttggccttcttgtggaaaa 409 |||||||||||||| || | ||||||||| ||||||| Sbjct: 47379 acaatcttctttgtggtttaggccttcttttggaaaa 47415
>emb|CR847504.13| Zebrafish DNA sequence from clone DKEYP-51G9 in linkage group 4, complete sequence Length = 138906 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 cagaaatttaaagataataca 203 ||||||||||||||||||||| Sbjct: 137941 cagaaatttaaagataataca 137961
>emb|AL845158.5| Mouse DNA sequence from clone RP23-147E6 on chromosome 4 Contains a component of oligomeric golgi complex 1 (Cog5) pseudogene and part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 198523 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 ctcttgatagcacgttgtgag 339 ||||||||||||||||||||| Sbjct: 160961 ctcttgatagcacgttgtgag 160941
>emb|BX663524.6| Zebrafish DNA sequence from clone DKEY-97K15, complete sequence Length = 196030 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cagaaatttaaagataataca 203 ||||||||||||||||||||| Sbjct: 69408 cagaaatttaaagataataca 69388
>emb|BX510647.10| Zebrafish DNA sequence from clone CH211-87N9 in linkage group 5, complete sequence Length = 198695 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cagaaatttaaagataataca 203 ||||||||||||||||||||| Sbjct: 183298 cagaaatttaaagataataca 183278
>gb|AC007416.12|AC007416 Drosophila melanogaster, chromosome 2L, region 28B-28B, BAC clone BACR08I01, complete sequence Length = 169427 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 369 cagcacaatcttctttgttgtcttggcct 397 ||||||||||||||| || |||||||||| Sbjct: 94739 cagcacaatcttcttggtggtcttggcct 94767
>ref|NM_063974.4| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-41) (rpl-41) mRNA, complete cds Length = 374 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 481 tccttacccttcttatactgggtaaccttgtgg 513 ||||| |||||||| || ||||||||||||||| Sbjct: 100 tcctttcccttcttgtattgggtaaccttgtgg 68
>gb|AC020891.8|AC020891 Homo sapiens chromosome 15 clone RP11-108K3 map 15q21, complete sequence Length = 144714 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 285 cttcttgtctccaccgatttcaaagtgcttgcacctcttgatagc 329 |||||| ||||| || | |||||| |||||||| ||||||||||| Sbjct: 80816 cttcttatctcctcccagttcaaaatgcttgcatctcttgatagc 80860
>gb|AF304121.1|AF304121 Caenorhabditis elegans 60S ribosomal protein L44 L41 (2L388) mRNA, complete cds Length = 371 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 481 tccttacccttcttatactgggtaaccttgtgg 513 ||||| |||||||| || ||||||||||||||| Sbjct: 100 tcctttcccttcttgtattgggtaaccttgtgg 68
>ref|XM_220057.3| PREDICTED: Rattus norvegicus similar to expressed sequence AW210596 (predicted) (LOC309525), mRNA Length = 1656 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 480 gtccttacccttcttatactgggtaaccttgtg 512 |||||| |||||||||||||| ||||| ||||| Sbjct: 249 gtccttgcccttcttatactgagtaactttgtg 217
>emb|CT025695.6| Zebrafish DNA sequence from clone CH211-246B8 in linkage group 4, complete sequence Length = 90788 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 cagaaatttaaagataataca 203 ||||||||||||||||||||| Sbjct: 1035 cagaaatttaaagataataca 1055
>gb|AE003619.3| Drosophila melanogaster chromosome 2L, section 28 of 83 of the complete sequence Length = 289516 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 369 cagcacaatcttctttgttgtcttggcct 397 ||||||||||||||| || |||||||||| Sbjct: 220970 cagcacaatcttcttggtggtcttggcct 220998
>emb|AL953842.8| Zebrafish DNA sequence from clone DKEY-33I11, complete sequence Length = 225654 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 gaaatttaaagataatacatt 205 ||||||||||||||||||||| Sbjct: 33056 gaaatttaaagataatacatt 33076
>emb|CR405701.20| Zebrafish DNA sequence from clone CH211-45M20 in linkage group 5, complete sequence Length = 125284 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 cagaaatttaaagataataca 203 ||||||||||||||||||||| Sbjct: 11282 cagaaatttaaagataataca 11302
>emb|BX511188.7| Zebrafish DNA sequence from clone DKEY-184A17 in linkage group 13, complete sequence Length = 233525 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cagaaatttaaagataataca 203 ||||||||||||||||||||| Sbjct: 54495 cagaaatttaaagataataca 54475
>gb|AC150428.3| Branchiostoma floridae clone CH302-86J11, complete sequence Length = 193518 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 taaagataatacattcttcttgtg 214 |||| ||||||||||||||||||| Sbjct: 127240 taaatataatacattcttcttgtg 127263 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,361,339 Number of Sequences: 3902068 Number of extensions: 5361339 Number of successful extensions: 112235 Number of sequences better than 10.0: 384 Number of HSP's better than 10.0 without gapping: 380 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 111120 Number of HSP's gapped (non-prelim): 1050 length of query: 564 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 541 effective length of database: 17,143,297,704 effective search space: 9274524057864 effective search space used: 9274524057864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)