ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4j01 |
|---|---|
| Clone Library Name | barley_pub |
>CJ070_MOUSE (Q91WS0) Protein C10orf70 homolog| Length = 108 Score = 74.7 bits (182), Expect = 2e-13 Identities = 33/62 (53%), Positives = 42/62 (67%) Frame = -3 Query: 492 INPAIRKEEAKVVDTVLAGELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLV 313 +N I+K+ KVV +L YCRCWRS FP CDG+H+KHN+ TGDNVGPL++ Sbjct: 45 VNLQIQKDNPKVVHAFDMEDLGDKAV-YCRCWRSKKFPFCDGAHIKHNEETGDNVGPLII 103 Query: 312 KK 307 KK Sbjct: 104 KK 105
>CJ070_HUMAN (Q9NZ45) Protein C10orf70| Length = 108 Score = 73.2 bits (178), Expect = 4e-13 Identities = 33/62 (53%), Positives = 41/62 (66%) Frame = -3 Query: 492 INPAIRKEEAKVVDTVLAGELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLV 313 IN I+K+ K+V +L YCRCWRS FP CDG+H KHN+ TGDNVGPL++ Sbjct: 45 INLHIQKDNPKIVHAFDMEDLGDKAV-YCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 103 Query: 312 KK 307 KK Sbjct: 104 KK 105
>CYSI_PHOPR (Q6LM59) Sulfite reductase [NADPH] hemoprotein beta-component (EC| 1.8.1.2) (SIR-HP) (SIRHP) Length = 563 Score = 33.5 bits (75), Expect = 0.38 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +1 Query: 412 RGERLGELPGEDGVDHLGLLLPDGRVYPTP 501 RG+R+G + G DG HL L + +GR+ TP Sbjct: 333 RGDRIGWVEGIDGKHHLALFIENGRLLDTP 362
>CYSI_VIBPA (Q87L91) Sulfite reductase [NADPH] hemoprotein beta-component (EC| 1.8.1.2) (SIR-HP) (SIRHP) Length = 578 Score = 32.0 bits (71), Expect = 1.1 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +1 Query: 376 QWKCSRSPAPAVRGERLGELPGEDGVDHLGLLLPDGRVYPTP 501 Q++ SR RG+R+G + G DG HL L + +GR+ P Sbjct: 336 QFEASRPYEFTERGDRIGWVEGIDGKFHLALFIENGRLLDYP 377
>CYSI_VIBF1 (Q5E840) Sulfite reductase [NADPH] hemoprotein beta-component (EC| 1.8.1.2) (SIR-HP) (SIRHP) Length = 576 Score = 32.0 bits (71), Expect = 1.1 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +1 Query: 376 QWKCSRSPAPAVRGERLGELPGEDGVDHLGLLLPDGRVYPTP 501 Q++ SR RG+R+G + G DG HL L + +GR+ P Sbjct: 334 QFEKSRPYELTERGDRIGWVEGIDGKHHLALFIENGRLLDYP 375
>BCN1_MOUSE (O88597) Beclin-1 (Coiled-coil myosin-like BCL2-interacting| protein) Length = 448 Score = 31.6 bits (70), Expect = 1.5 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = +2 Query: 371 SHSGNVPDLQHRQYGVSGLESSPARTVSTTLASSFRMAG 487 ++SG P ++ RQ GVS PAR +ST A+SF + G Sbjct: 61 ANSGEEPFIETRQDGVSRRFIPPARMMSTESANSFTLIG 99
>CYSI_VIBCH (Q9KUX3) Sulfite reductase [NADPH] hemoprotein beta-component (EC| 1.8.1.2) (SIR-HP) (SIRHP) Length = 577 Score = 30.8 bits (68), Expect = 2.5 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +1 Query: 412 RGERLGELPGEDGVDHLGLLLPDGRVYPTP 501 RG+R+G + G DG HL L + +GR+ P Sbjct: 347 RGDRIGWVEGIDGKHHLTLFIENGRILDFP 376
>NCPR_HUMAN (P16435) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)| (P450R) Length = 676 Score = 30.0 bits (66), Expect = 4.3 Identities = 19/74 (25%), Positives = 35/74 (47%) Frame = +1 Query: 115 TYDTMHVI*AEIILIFSLNSALLINGVVGLLQHRTSFLLRKKRKTNYAYILFHSTQIEEK 294 T T+ AE + +FS+ +L + +VGLL + F +K+ + I ++ + E Sbjct: 7 TSSTVSEAVAEEVSLFSMTDMILFSLIVGLLTYWFLFRKKKEEVPEFTKIQTLTSSVRES 66 Query: 295 *LILLFNKQGAHII 336 + K G +II Sbjct: 67 SFVEKMKKTGRNII 80
>CYSI_VIBVY (Q7MHA6) Sulfite reductase [NADPH] hemoprotein beta-component (EC| 1.8.1.2) (SIR-HP) (SIRHP) Length = 578 Score = 30.0 bits (66), Expect = 4.3 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +1 Query: 412 RGERLGELPGEDGVDHLGLLLPDGRVYPTP 501 RG+R+G + G DG HL L + +GR+ P Sbjct: 348 RGDRIGWVEGIDGKHHLTLFIENGRLLDYP 377
>CYSI_VIBVU (Q8DCK1) Sulfite reductase [NADPH] hemoprotein beta-component (EC| 1.8.1.2) (SIR-HP) (SIRHP) Length = 578 Score = 30.0 bits (66), Expect = 4.3 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +1 Query: 412 RGERLGELPGEDGVDHLGLLLPDGRVYPTP 501 RG+R+G + G DG HL L + +GR+ P Sbjct: 348 RGDRIGWVEGIDGKHHLTLFIENGRLLDYP 377
>BCN1_PIG (Q4A1L5) Beclin-1| Length = 448 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +2 Query: 371 SHSGNVPDLQHRQYGVSGLESSPARTVSTTLASSFRMAG 487 ++ G P ++ RQ GVS PAR +ST A+SF + G Sbjct: 61 ANPGEEPFIETRQDGVSRRFIPPARMMSTESANSFTLIG 99
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 29.6 bits (65), Expect = 5.6 Identities = 21/51 (41%), Positives = 22/51 (43%) Frame = +1 Query: 382 KCSRSPAPAVRGERLGELPGEDGVDHLGLLLPDGRVYPTPSGGGVXLRTDG 534 K R P + G R GEL G V H G L G P P GG RT G Sbjct: 189 KARRGPKASKAG-REGELGGGSPVAHRGTSLGTGVRDPAPRGGRGRARTPG 238
>ARGB_RHOPA (Q6NC44) Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase) (AGK)| (N-acetyl-L-glutamate 5-phosphotransferase) Length = 298 Score = 28.9 bits (63), Expect = 9.5 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = -3 Query: 507 AAGSGINPAIRKEEAKVVDTVLAGELSKPLTPYCRCWRSGTFPLC--DGSHVKHNKATGD 334 AAG I A E +V+ VLAG ++K L Y LC DG+ V +KAT Sbjct: 87 AAGLRITDAATIE---IVEMVLAGSINKQLVGYINEAGGKAVGLCGKDGNMVSASKATRT 143 Query: 333 NVGP 322 V P Sbjct: 144 MVDP 147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,491,481 Number of Sequences: 219361 Number of extensions: 1441534 Number of successful extensions: 3471 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3427 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3471 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
