Clone Name | rbaak4j01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK070358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052K14, full insert sequence Length = 563 Score = 301 bits (152), Expect = 1e-78 Identities = 188/200 (94%) Strand = Plus / Minus Query: 296 aactcattctactttttaacaagcaaggggcccacattatcacccgttgctttgttgtgc 355 |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 403 aactcattctacttcttaacaagtaagggccccacattatcacccgttgctttgttgtgc 344 Query: 356 ttcacatggcttccatcacacagtggaaatgttcccgatctccagcaccggcagtacggg 415 |||||||||||||||||||| || |||||||| || |||||||||||||||||||||||| Sbjct: 343 ttcacatggcttccatcacaaaggggaaatgtgcctgatctccagcaccggcagtacggg 284 Query: 416 gtgagcggcttggagagctccccggcgaggacggtgtcgaccaccttggcctcctccttc 475 |||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 283 gtgagcggcttggagagctcgccggcgaggacagtgtcgaccaccttctcctcctccttc 224 Query: 476 cggatggccgggtttatccc 495 ||||||| |||||||||||| Sbjct: 223 cggatggacgggtttatccc 204
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 161 bits (81), Expect = 3e-36 Identities = 102/109 (93%) Strand = Plus / Plus Query: 296 aactcattctactttttaacaagcaaggggcccacattatcacccgttgctttgttgtgc 355 |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 16546684 aactcattctacttcttaacaagtaagggccccacattatcacccgttgctttgttgtgc 16546743 Query: 356 ttcacatggcttccatcacacagtggaaatgttcccgatctccagcacc 404 |||||||||||||||||||| || |||||||| || ||||||||||||| Sbjct: 16546744 ttcacatggcttccatcacaaaggggaaatgtgcctgatctccagcacc 16546792 Score = 147 bits (74), Expect = 4e-32 Identities = 89/94 (94%) Strand = Plus / Plus Query: 402 accggcagtacggggtgagcggcttggagagctccccggcgaggacggtgtcgaccacct 461 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 16548105 accggcagtacggggtgagcggcttggagagctcgccggcgaggacagtgtcgaccacct 16548164 Query: 462 tggcctcctccttccggatggccgggtttatccc 495 | |||||||||||||||||| |||||||||||| Sbjct: 16548165 tctcctcctccttccggatggacgggtttatccc 16548198
>dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0003B09 Length = 161813 Score = 161 bits (81), Expect = 3e-36 Identities = 102/109 (93%) Strand = Plus / Plus Query: 296 aactcattctactttttaacaagcaaggggcccacattatcacccgttgctttgttgtgc 355 |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 37304 aactcattctacttcttaacaagtaagggccccacattatcacccgttgctttgttgtgc 37363 Query: 356 ttcacatggcttccatcacacagtggaaatgttcccgatctccagcacc 404 |||||||||||||||||||| || |||||||| || ||||||||||||| Sbjct: 37364 ttcacatggcttccatcacaaaggggaaatgtgcctgatctccagcacc 37412 Score = 147 bits (74), Expect = 4e-32 Identities = 89/94 (94%) Strand = Plus / Plus Query: 402 accggcagtacggggtgagcggcttggagagctccccggcgaggacggtgtcgaccacct 461 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 38725 accggcagtacggggtgagcggcttggagagctcgccggcgaggacagtgtcgaccacct 38784 Query: 462 tggcctcctccttccggatggccgggtttatccc 495 | |||||||||||||||||| |||||||||||| Sbjct: 38785 tctcctcctccttccggatggacgggtttatccc 38818
>ref|NM_124551.3| Arabidopsis thaliana unknown protein AT5G51720 mRNA, complete cds Length = 494 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 344 gctttgttgtgcttcacatggcttccatcacacagtggaaatgttcccgatctccagcac 403 |||||||||||||||||||| || |||||||||| |||||| || ||||| ||||| ||| Sbjct: 333 gctttgttgtgcttcacatgactcccatcacacaatggaaacgtccccgacctccaacac 274 Query: 404 c 404 | Sbjct: 273 c 273
>gb|AY057716.1| Arabidopsis thaliana AT5g51720/MIO24_14 mRNA, complete cds Length = 327 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 344 gctttgttgtgcttcacatggcttccatcacacagtggaaatgttcccgatctccagcac 403 |||||||||||||||||||| || |||||||||| |||||| || ||||| ||||| ||| Sbjct: 284 gctttgttgtgcttcacatgactcccatcacacaatggaaacgtccccgacctccaacac 225 Query: 404 c 404 | Sbjct: 224 c 224
>gb|AF372888.1|AF372888 Arabidopsis thaliana AT5g51720/MIO24_14 mRNA, complete cds Length = 450 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 344 gctttgttgtgcttcacatggcttccatcacacagtggaaatgttcccgatctccagcac 403 |||||||||||||||||||| || |||||||||| |||||| || ||||| ||||| ||| Sbjct: 327 gctttgttgtgcttcacatgactcccatcacacaatggaaacgtccccgacctccaacac 268 Query: 404 c 404 | Sbjct: 267 c 267
>emb|BX832390.1|CNS09ZLJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZF12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 344 gctttgttgtgcttcacatggcttccatcacacagtggaaatgttcccgatctccagcac 403 |||||||||||||||||||| || |||||||||| |||||| || ||||| ||||| ||| Sbjct: 316 gctttgttgtgcttcacatgactcccatcacacaatggaaacgtccccgacctccaacac 257 Query: 404 c 404 | Sbjct: 256 c 256
>emb|BX833829.1|CNS09Z0B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZE07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 440 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 344 gctttgttgtgcttcacatggcttccatcacacagtggaaatgttcccgatctccagcac 403 |||||||||||||||||||| || |||||||||| |||||| || ||||| ||||| ||| Sbjct: 314 gctttgttgtgcttcacatgactcccatcacacaatggaaacgtccccgacctccaacac 255 Query: 404 c 404 | Sbjct: 254 c 254
>dbj|AB010074.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIO24 Length = 86212 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 344 gctttgttgtgcttcacatggcttccatcacacagtggaaatgttcccgatctccagcac 403 |||||||||||||||||||| || |||||||||| |||||| || ||||| ||||| ||| Sbjct: 14087 gctttgttgtgcttcacatgactcccatcacacaatggaaacgtccccgacctccaacac 14028 Query: 404 c 404 | Sbjct: 14027 c 14027
>emb|AJ635187.1| Mangifera indica microsatellite DNA, locus mMiCIR025 Length = 359 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 316 aagcaaggggcccacattatcacccgttgctttgttgtgcttcacatggcttccatcaca 375 |||||| || || |||||||| || || |||||||||||||| ||||| ||||||||| Sbjct: 114 aagcaaaggcccaacattatccccagtagctttgttgtgctttacatgtgatccatcaca 173 Query: 376 cagtggaaatgttcccgatctcca 399 ||| ||||||||||| || ||||| Sbjct: 174 cagaggaaatgttcctgacctcca 197
>gb|AY086662.1| Arabidopsis thaliana clone 266744 mRNA, complete sequence Length = 458 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 344 gctttgttgtgcttcacatggcttccatcacacagtggaaatgttcccgatctcc 398 |||||||||||||||||||| || |||||||||| |||||| || ||||| |||| Sbjct: 333 gctttgttgtgcttcacatgactcccatcacacaatggaaacgtccccgacctcc 279
>emb|BX832934.1|CNS09ZBK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL24ZD01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 447 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 344 gctttgttgtgcttcacatggcttccatcacacagtggaaatgttcccgatctccagcac 403 |||||||||||||| ||||| || |||||||||| |||||| || ||||| ||||| ||| Sbjct: 321 gctttgttgtgcttaacatgactcccatcacacaatggaaacgtccccgacctccaacac 262 Query: 404 c 404 | Sbjct: 261 c 261
>emb|BX833903.1|CNS09Z0P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL82ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 463 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 344 gctttgttgtgcttcacatggcttccatcacacagtggaaatgttcccgatctccagcac 403 |||||||||||||| ||||| || |||||||||| |||||| || ||||| ||||| ||| Sbjct: 313 gctttgttgtgctttacatgactcccatcacacaatggaaacgtccccgacctccaacac 254 Query: 404 c 404 | Sbjct: 253 c 253
>emb|CR759811.8| Zebrafish DNA sequence from clone CH211-190M18 in linkage group 13, complete sequence Length = 132853 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 aacacaaattgaggaaaaataa 297 |||||||||||||||||||||| Sbjct: 1671 aacacaaattgaggaaaaataa 1692
>emb|BX629343.11| Zebrafish DNA sequence from clone DKEY-66M17 in linkage group 13, complete sequence Length = 207677 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 aacacaaattgaggaaaaataa 297 |||||||||||||||||||||| Sbjct: 50936 aacacaaattgaggaaaaataa 50957
>gb|AC109821.5| Homo sapiens BAC clone RP11-509D19 from 4, complete sequence Length = 106123 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 ttttaatgcatcctataaaaat 105 |||||||||||||||||||||| Sbjct: 4418 ttttaatgcatcctataaaaat 4397
>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete sequence Length = 252420 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 agaaataatacttattttctc 164 ||||||||||||||||||||| Sbjct: 82999 agaaataatacttattttctc 82979
>ref|XM_597939.2| PREDICTED: Bos taurus similar to Tubulin tyrosine ligase-like protein 2 (Testis specific protein NYD-TSPG) (LOC519714), mRNA Length = 1866 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 cctcctccttccggatggccg 485 ||||||||||||||||||||| Sbjct: 440 cctcctccttccggatggccg 460
>gb|AY261877.1| Ciona intestinalis eukaryotic translation initiation factor 2-like mRNA, partial cds Length = 2539 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tataaaaatttatcaataaca 117 ||||||||||||||||||||| Sbjct: 2296 tataaaaatttatcaataaca 2276
>gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11 genomic sequence, complete sequence Length = 144422 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 tataaaaatttatcaataacatatg 121 |||| |||||||||||||||||||| Sbjct: 129204 tatataaatttatcaataacatatg 129180
>emb|BX928751.8| Zebrafish DNA sequence from clone CH211-148P7 in linkage group 1, complete sequence Length = 36866 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 tccactcaacacaaattgaggaaaaataa 297 |||||| ||||||||||| |||||||||| Sbjct: 23573 tccactaaacacaaattggggaaaaataa 23601
>emb|CR759893.7| Zebrafish DNA sequence from clone DKEY-220K22 in linkage group 5, complete sequence Length = 213981 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 464 gcctcctccttccggatggcc 484 ||||||||||||||||||||| Sbjct: 1387 gcctcctccttccggatggcc 1407
>emb|BX950214.7| Zebrafish DNA sequence from clone CH211-214C2 in linkage group 5, complete sequence Length = 197499 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 gcctcctccttccggatggcc 484 ||||||||||||||||||||| Sbjct: 98743 gcctcctccttccggatggcc 98723
>emb|BX649494.6| Zebrafish DNA sequence from clone DKEY-173J18 in linkage group 16, complete sequence Length = 175187 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgtt 388 ||||||||||||||||||||| Sbjct: 129179 ccatcacacagtggaaatgtt 129199
>emb|BX088652.6| Zebrafish DNA sequence from clone DKEY-256M19 in linkage group 1, complete sequence Length = 161341 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgtt 388 ||||||||||||||||||||| Sbjct: 107414 ccatcacacagtggaaatgtt 107394
>emb|BX005431.3| Zebrafish DNA sequence from clone CH211-214G2 in linkage group 2, complete sequence Length = 200591 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgtt 388 ||||||||||||||||||||| Sbjct: 120609 ccatcacacagtggaaatgtt 120629
>emb|CR753832.8| Zebrafish DNA sequence from clone DKEY-71C18 in linkage group 5, complete sequence Length = 122496 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 464 gcctcctccttccggatggcc 484 ||||||||||||||||||||| Sbjct: 121883 gcctcctccttccggatggcc 121903
>gb|AC110224.7| Mus musculus chromosome 18, clone RP24-286H12, complete sequence Length = 167379 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 aaataatacttattttctctctta 169 |||||||||| ||||||||||||| Sbjct: 116184 aaataatactcattttctctctta 116161
>ref|XM_713519.1| Candida albicans SC5314 hypothetical protein (CaO19_10047), mRNA Length = 1230 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ataaaaatttatcaataaca 117 |||||||||||||||||||| Sbjct: 473 ataaaaatttatcaataaca 492
>ref|XM_713436.1| Candida albicans SC5314 hypothetical protein (CaO19_2511), mRNA Length = 1230 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ataaaaatttatcaataaca 117 |||||||||||||||||||| Sbjct: 473 ataaaaatttatcaataaca 492
>gb|AC163398.5| Mus musculus chromosome 18, clone RP24-376O5, complete sequence Length = 136268 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 aaataatacttattttctctctta 169 |||||||||| ||||||||||||| Sbjct: 135657 aaataatactcattttctctctta 135680
>gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete sequence Length = 207268 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gcttccatcacacagtggaa 383 |||||||||||||||||||| Sbjct: 13069 gcttccatcacacagtggaa 13050
>emb|CR450742.13| Zebrafish DNA sequence from clone CH211-232A5 in linkage group 3, complete sequence Length = 172729 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 62827 ccatcacacagtggaaatgt 62846
>emb|AL928724.10| Zebrafish DNA sequence from clone CH211-51K14 in linkage group 15, complete sequence Length = 165299 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 158729 ccatcacacagtggaaatgt 158748
>emb|CR407585.14| Zebrafish DNA sequence from clone CH211-141O18 in linkage group 6, complete sequence Length = 164483 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 31451 ccatcacacagtggaaatgt 31432
>emb|CR388015.14| Zebrafish DNA sequence from clone DKEY-246L21 in linkage group 24, complete sequence Length = 140648 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 95719 ccatcacacagtggaaatgt 95738
>emb|CR394568.7| Zebrafish DNA sequence from clone CH211-253D5 in linkage group 21, complete sequence Length = 131341 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 96386 ccatcacacagtggaaatgt 96367
>emb|BX950181.11| Zebrafish DNA sequence from clone DKEY-28O19 in linkage group 10, complete sequence Length = 118366 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 110637 ccatcacacagtggaaatgt 110618
>emb|BX890603.17| Zebrafish DNA sequence from clone DKEYP-19G9 in linkage group 23, complete sequence Length = 184711 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 34180 ccatcacacagtggaaatgt 34161
>emb|BX548003.29| Zebrafish DNA sequence from clone DKEY-97I5 in linkage group 9, complete sequence Length = 145468 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 1298 ccatcacacagtggaaatgt 1279
>emb|BX950192.10| Zebrafish DNA sequence from clone CH211-173E20 in linkage group 17, complete sequence Length = 135523 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 131071 ccatcacacagtggaaatgt 131052
>emb|BX901972.12| Zebrafish DNA sequence from clone DKEY-24H22 in linkage group 1, complete sequence Length = 212798 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 106526 ccatcacacagtggaaatgt 106507
>emb|BX571952.13| Zebrafish DNA sequence from clone DKEY-35E8 in linkage group 11, complete sequence Length = 175925 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 779 ccatcacacagtggaaatgt 798
>emb|CR376789.4| Zebrafish DNA sequence from clone DKEYP-87A2 in linkage group 6, complete sequence Length = 190610 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 131174 ccatcacacagtggaaatgt 131193
>emb|AL390195.10| Human DNA sequence from clone RP11-552M11 on chromosome 1 Contains the OVGP1 gene for oviductal glycoprotein 1, 120kDa (mucin 9, oviductin), a NEDD8-conjugating enzyme (NCE2) pseudogene, a novel gene, the gene for MEP50 protein (MEP50), the ATP5F1 gene for ATP synthase H+ transporting mitochondrial F0 complex subunit b isoform 1, novel gene (MGC24133), the 3' end of the gene for AD026 protein (AD026), the ADORA3 gene for adenosine A3 receptor, the 5' end of the RAP1A gene for RAP1A member of RAS oncogene. family and a Cpg island, complete sequence Length = 153108 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 aaaaatgactgatatactga 72 |||||||||||||||||||| Sbjct: 143594 aaaaatgactgatatactga 143575
>emb|AL513204.10| Human DNA sequence from clone RP11-418B8 on chromosome 10 Contains part of the NRG3 gene for neuregulin 3, complete sequence Length = 111173 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 aaaataactcattctactttttaa 314 ||||||||||||| |||||||||| Sbjct: 100662 aaaataactcattttactttttaa 100685
>emb|AL354749.6| Human DNA sequence from clone RP11-156D10 on chromosome 10 Contains part of the NRG3 gene for neuregulin 3, complete sequence Length = 196000 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 aaaataactcattctactttttaa 314 ||||||||||||| |||||||||| Sbjct: 26385 aaaataactcattttactttttaa 26408
>emb|AL161796.14| Human DNA sequence from clone RP11-487O23 on chromosome 1q31.1-31.3, complete sequence Length = 52139 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 taatgcatcctataaaaatt 106 |||||||||||||||||||| Sbjct: 29364 taatgcatcctataaaaatt 29345
>emb|AL137840.12| Human DNA sequence from clone RP11-241O12 on chromosome Xq26.3-27.3 Contains a novel gene, complete sequence Length = 84912 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 taattctgctcttttgatca 187 |||||||||||||||||||| Sbjct: 1822 taattctgctcttttgatca 1803
>emb|AL049588.11|HSJ169P22 Human DNA sequence from clone RP1-169P22 on chromosome Xq27.1-28 Contains two pseudogenes similar to part of ribonucleotide reductase M2 polypeptide (RRM2), complete sequence Length = 150579 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 aataatacttattttctctcttaa 170 |||||||| ||||||||||||||| Sbjct: 142449 aataatacatattttctctcttaa 142426
>emb|BX511087.12| Zebrafish DNA sequence from clone DKEY-261O7 in linkage group 17, complete sequence Length = 184012 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 10298 ccatcacacagtggaaatgt 10279
>emb|CR762397.7| Zebrafish DNA sequence from clone DKEY-258A22 in linkage group 14, complete sequence Length = 107563 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 aaaatttatcaataacatat 120 |||||||||||||||||||| Sbjct: 54964 aaaatttatcaataacatat 54983
>emb|BX908780.7| Zebrafish DNA sequence from clone CH211-198K9 in linkage group 1, complete sequence Length = 199679 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 79877 ccatcacacagtggaaatgt 79896
>emb|BX539334.6| Zebrafish DNA sequence from clone DKEYP-4H2 in linkage group 14, complete sequence Length = 114428 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 aaaatttatcaataacatat 120 |||||||||||||||||||| Sbjct: 52557 aaaatttatcaataacatat 52538
>emb|BX322231.13| Zebrafish DNA sequence from clone CH211-145C1 in linkage group 9, complete sequence Length = 166681 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 153971 ccatcacacagtggaaatgt 153952 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 153580 ccatcacacagtggaaatgt 153561
>emb|BX950873.9| Zebrafish DNA sequence from clone CH211-119G22 in linkage group 11, complete sequence Length = 154950 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 77591 ccatcacacagtggaaatgt 77572
>emb|BX004862.9| Zebrafish DNA sequence from clone DKEY-200M9 in linkage group 4 Contains the gene for a novel protein similar to vertebrate TAFA protein 5 (TAFA5) and a CpG island, complete sequence Length = 174359 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 135381 ccatcacacagtggaaatgt 135400
>emb|CR354536.8| Zebrafish DNA sequence from clone DKEY-101K8 in linkage group 17, complete sequence Length = 157228 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 25069 ccatcacacagtggaaatgt 25050
>emb|CR376858.7| Zebrafish DNA sequence from clone CH211-87A2 in linkage group 8, complete sequence Length = 165716 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 tcaacacaaattgaggaaaaataa 297 |||||| ||||||||||||||||| Sbjct: 66387 tcaacagaaattgaggaaaaataa 66364
>emb|BX957316.7| Zebrafish DNA sequence from clone CH211-120B19 in linkage group 8, complete sequence Length = 144967 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 28974 ccatcacacagtggaaatgt 28955
>emb|BX511263.7| Zebrafish DNA sequence from clone DKEY-204K5 in linkage group 17, complete sequence Length = 178207 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 112097 ccatcacacagtggaaatgt 112116
>emb|BX537142.10| Zebrafish DNA sequence from clone CH211-271D10 in linkage group 16, complete sequence Length = 176055 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 77648 ccatcacacagtggaaatgt 77629
>emb|BX571727.8| Zebrafish DNA sequence from clone DKEY-14I22 in linkage group 5, complete sequence Length = 102670 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 14723 ccatcacacagtggaaatgt 14704
>emb|BX322610.5| Zebrafish DNA sequence from clone CH211-245M13 in linkage group 25, complete sequence Length = 72706 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 26698 ccatcacacagtggaaatgt 26717
>gb|AC090506.7| Homo sapiens chromosome 18, clone RP11-675P14, complete sequence Length = 188609 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 acacaaattgaggaaaaata 296 |||||||||||||||||||| Sbjct: 161912 acacaaattgaggaaaaata 161893
>emb|BX511146.6| Zebrafish DNA sequence from clone DKEY-150K1 in linkage group 8, complete sequence Length = 182736 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 tcaacacaaattgaggaaaaataa 297 |||||| ||||||||||||||||| Sbjct: 104725 tcaacagaaattgaggaaaaataa 104748
>emb|BX950870.7| Zebrafish DNA sequence from clone DKEY-242M17 in linkage group 6, complete sequence Length = 186279 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 112559 ccatcacacagtggaaatgt 112578
>emb|BX248113.22| Zebrafish DNA sequence from clone CH211-132F21, complete sequence Length = 146026 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 41896 ccatcacacagtggaaatgt 41877
>gb|AC023886.7| Homo sapiens BAC clone RP11-402J6 from 4, complete sequence Length = 179697 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 aaaatttatcaataacatat 120 |||||||||||||||||||| Sbjct: 140041 aaaatttatcaataacatat 140060
>dbj|AK132972.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930539D10 product:unclassifiable, full insert sequence Length = 1514 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aaattgaggaaaaataactc 300 |||||||||||||||||||| Sbjct: 1004 aaattgaggaaaaataactc 1023
>gb|AC087506.7| Homo sapiens chromosome 18, clone RP11-726O24, complete sequence Length = 169753 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 acacaaattgaggaaaaata 296 |||||||||||||||||||| Sbjct: 1284 acacaaattgaggaaaaata 1265
>ref|XM_690504.1| PREDICTED: Danio rerio similar to R31449_3 (LOC567213), mRNA Length = 1389 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 1243 ccatcacacagtggaaatgt 1262
>emb|BX276178.15| Zebrafish DNA sequence from clone CH211-245G9, complete sequence Length = 150884 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 61935 ccatcacacagtggaaatgt 61954
>emb|BX544872.8| Zebrafish DNA sequence from clone DKEY-58L12 in linkage group 17, complete sequence Length = 80171 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 51199 ccatcacacagtggaaatgt 51180
>emb|BX470167.7| Zebrafish DNA sequence from clone DKEYP-86G2 in linkage group 5, complete sequence Length = 189590 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 7235 ccatcacacagtggaaatgt 7254
>emb|BX470204.13| Zebrafish DNA sequence from clone CH211-63C23 in linkage group 10, complete sequence Length = 185190 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 2804 ccatcacacagtggaaatgt 2785
>emb|BX649437.8| Zebrafish DNA sequence from clone DKEY-28J9 in linkage group 16, complete sequence Length = 158346 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 44412 ccatcacacagtggaaatgt 44431
>emb|BX323985.8| Zebrafish DNA sequence from clone CH211-194D1 in linkage group 17, complete sequence Length = 198162 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 190 ccatcacacagtggaaatgt 209
>gb|AC093101.1| Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR06I01, complete sequence Length = 175167 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cttttaatgcatcctataaa 102 |||||||||||||||||||| Sbjct: 60799 cttttaatgcatcctataaa 60780
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 tagaacttcatttcttttga 232 |||||||||||||||||||| Sbjct: 5596392 tagaacttcatttcttttga 5596373
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 gcatttacaaatttgtcact 24 |||||||||||||||||||| Sbjct: 33350332 gcatttacaaatttgtcact 33350313
>emb|BX120015.12| Zebrafish DNA sequence from clone RP71-3A8 in linkage group 7, complete sequence Length = 156089 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 4312 ccatcacacagtggaaatgt 4293
>emb|BX088566.6| Zebrafish DNA sequence from clone DKEY-63E5 in linkage group 6, complete sequence Length = 195778 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 tcaacacaaattgaggaaaaataa 297 |||||| ||||||||||||||||| Sbjct: 19081 tcaacagaaattgaggaaaaataa 19058
>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold Length = 1825024 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 acttattttctctcttaatt 172 |||||||||||||||||||| Sbjct: 1092986 acttattttctctcttaatt 1093005
>gb|AC017048.6| Homo sapiens BAC clone RP11-324L17 from 2, complete sequence Length = 186373 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ttgctttgttgtgcttcaca 361 |||||||||||||||||||| Sbjct: 174538 ttgctttgttgtgcttcaca 174557
>gb|AC107075.4| Homo sapiens BAC clone RP11-452N17 from 2, complete sequence Length = 176425 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 tcttaattctgctcttttga 184 |||||||||||||||||||| Sbjct: 164466 tcttaattctgctcttttga 164485
>emb|BX005464.7| Zebrafish DNA sequence from clone DKEY-24J21, complete sequence Length = 199639 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 106028 ccatcacacagtggaaatgt 106009
>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 117585 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tagaacttcatttcttttga 232 |||||||||||||||||||| Sbjct: 1743 tagaacttcatttcttttga 1762
>emb|BX004969.5| Zebrafish DNA sequence from clone CH211-89C12 in linkage group 7, complete sequence Length = 161142 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 42441 ccatcacacagtggaaatgt 42460
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1715_H01 Length = 138733 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 gcatttacaaatttgtcact 24 |||||||||||||||||||| Sbjct: 91082 gcatttacaaatttgtcact 91063
>emb|BX005320.4| Zebrafish DNA sequence from clone DKEY-27P3, complete sequence Length = 142827 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 23715 ccatcacacagtggaaatgt 23734
>emb|AL953855.9| Zebrafish DNA sequence from clone CH211-239F4 in linkage group 1, complete sequence Length = 146080 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 113924 ccatcacacagtggaaatgt 113905
>emb|AL845516.8| Zebrafish DNA sequence from clone DKEY-43F11, complete sequence Length = 205826 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 200046 ccatcacacagtggaaatgt 200027
>emb|CR293523.11| Zebrafish DNA sequence from clone DKEY-104J7 in linkage group 7, complete sequence Length = 214581 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 141926 ccatcacacagtggaaatgt 141945
>gb|AC154671.2| Mus musculus BAC clone RP24-294I15 from 14, complete sequence Length = 146499 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aaaaaatgactgatatactg 71 |||||||||||||||||||| Sbjct: 50333 aaaaaatgactgatatactg 50352
>gb|AC148396.3| Medicago truncatula chromosome 2 BAC clone mth2-17k4, complete sequence Length = 108273 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ttcacatggcttccatcaca 375 |||||||||||||||||||| Sbjct: 94241 ttcacatggcttccatcaca 94260
>emb|BX927074.16| Zebrafish DNA sequence from clone DKEY-7L12 in linkage group 18, complete sequence Length = 152517 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 131332 ccatcacacagtggaaatgt 131313
>emb|CR388140.8| Zebrafish DNA sequence from clone CH211-190G11, complete sequence Length = 160541 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 acaaattgaggaaaaataac 298 |||||||||||||||||||| Sbjct: 122196 acaaattgaggaaaaataac 122177
>emb|CR925787.5| Zebrafish DNA sequence from clone DKEYP-110H2 in linkage group 10, complete sequence Length = 89686 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 35867 ccatcacacagtggaaatgt 35886
>emb|CT009616.17| Zebrafish DNA sequence from clone CH211-37A16 in linkage group 13, complete sequence Length = 77163 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 67142 ccatcacacagtggaaatgt 67161
>gb|AE003646.3| Drosophila melanogaster chromosome 2L, section 55 of 83 of the complete sequence Length = 265413 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cttttaatgcatcctataaa 102 |||||||||||||||||||| Sbjct: 105852 cttttaatgcatcctataaa 105833
>emb|BX640462.6| Zebrafish DNA sequence from clone CH211-153D8 in linkage group 24, complete sequence Length = 173882 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 38509 ccatcacacagtggaaatgt 38490
>gb|AC139303.3| Cercopithecus aethiops clone CH252-456L3, complete sequence Length = 179499 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 acttattttctctcttaatt 172 |||||||||||||||||||| Sbjct: 82034 acttattttctctcttaatt 82053
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 tagaacttcatttcttttga 232 |||||||||||||||||||| Sbjct: 5596381 tagaacttcatttcttttga 5596362
>emb|AL935333.9| Zebrafish DNA sequence from clone CH211-198I18 in linkage group 5, complete sequence Length = 199019 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 163474 ccatcacacagtggaaatgt 163493
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160556 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 tagaacttcatttcttttga 232 |||||||||||||||||||| Sbjct: 149197 tagaacttcatttcttttga 149178
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tagaacttcatttcttttga 232 |||||||||||||||||||| Sbjct: 56493 tagaacttcatttcttttga 56512
>emb|CR381686.16| Zebrafish DNA sequence from clone CH211-179L5 in linkage group 24, complete sequence Length = 137127 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccatcacacagtggaaatgt 387 |||||||||||||||||||| Sbjct: 54263 ccatcacacagtggaaatgt 54282
>gb|AC170751.2| Mus musculus BAC clone CH25-484K21 from chromosome 10, complete sequence Length = 105368 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aaattgaggaaaaataactc 300 |||||||||||||||||||| Sbjct: 9770 aaattgaggaaaaataactc 9789 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,353,058 Number of Sequences: 3902068 Number of extensions: 6353058 Number of successful extensions: 199327 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 198873 Number of HSP's gapped (non-prelim): 454 length of query: 536 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 513 effective length of database: 17,143,297,704 effective search space: 8794511722152 effective search space used: 8794511722152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)