ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaak4g24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate c... 129 9e-28
2emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precur... 125 1e-26
3emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical pr... 125 1e-26
4dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 125 1e-26
5dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 123 6e-26
6emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical pr... 109 9e-22
7emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putat... 109 9e-22
8gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carbo... 109 9e-22
9gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carbo... 109 9e-22
10dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate... 109 9e-22
11dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosph... 109 9e-22
12dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for r... 109 9e-22
13dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphat... 109 9e-22
14dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphospha... 109 9e-22
15dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bispho... 109 9e-22
16dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 109 9e-22
17dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 109 9e-22
18dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 109 9e-22
19dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisph... 109 9e-22
20dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosph... 109 9e-22
21dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bispho... 109 9e-22
22dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 109 9e-22
23dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 109 9e-22
24dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 109 9e-22
25dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 109 9e-22
26dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 109 9e-22
27dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 109 9e-22
28emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosp... 105 1e-20
29dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosp... 103 5e-20
30emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precur... 101 2e-19
31dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosph... 101 2e-19
32dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 101 2e-19
33dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphat... 101 2e-19
34dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate... 101 2e-19
35dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for r... 101 2e-19
36dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosp... 101 2e-19
37dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphospha... 101 2e-19
38dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 101 2e-19
39dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 101 2e-19
40dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 101 2e-19
41dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 101 2e-19
42dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 101 2e-19
43dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 101 2e-19
44dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosp... 101 2e-19
45dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosph... 96 1e-17
46dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for rib... 96 1e-17
47gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphospha... 94 5e-17
48dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosph... 94 5e-17
49dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for rib... 94 5e-17
50dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 94 5e-17
51gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate... 86 1e-14
52gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bi... 86 1e-14
53gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate... 86 1e-14
54gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisp... 80 8e-13
55gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1... 78 3e-12
56dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-12
57gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphat... 78 3e-12
58gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisp... 78 3e-12
59dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-12
60gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate ca... 78 3e-12
61gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bi... 78 3e-12
62gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulos... 78 3e-12
63gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisph... 78 3e-12
64gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bi... 78 3e-12
65gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bi... 78 3e-12
66gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphat... 78 3e-12
67gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate ca... 78 3e-12
68gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate ... 78 3e-12
69gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulos... 78 3e-12
70gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-12
71emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523... 78 3e-12
72gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate ca... 78 3e-12
73dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mR... 78 3e-12
74dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-10
75dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-10
76dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-10
77gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisph... 72 2e-10
78dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-10
79emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa... 72 2e-10
80gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate ca... 72 2e-10
81gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisp... 72 2e-10
82dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate c... 72 2e-10
83dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mR... 72 2e-10
84gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphat... 70 7e-10
85gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate ca... 64 5e-08
86dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-07
87dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-05
88dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-05
89gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxyl... 54 4e-05
90gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose... 54 4e-05
91emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate... 48 0.003
92emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene) 42 0.17
93emb|AJ439989.1|OSA439989 Oryza sativa partial mRNA for ribulose ... 40 0.67
94emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphat... 40 0.67
95emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate c... 40 0.67
96dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphat... 40 0.67
97ref|XM_361365.1| Magnaporthe grisea 70-15 hypothetical protein (... 38 2.6
98emb|AJ278756.1|AEV278756 Azoarcus evansii pac gene cluster for a... 38 2.6
99emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene 38 2.6
100gb|AY103730.1| Zea mays PCO095823 mRNA sequence 38 2.6 
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 816

 Score =  129 bits (65), Expect = 9e-28
 Identities = 67/68 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgac 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 308 gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgac 249

                   
Query: 61  ctgcttaa 68
           ||||||||
Sbjct: 248 ctgcttaa 241
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>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39 ribulosebisphosphate carboxylase) clones 234
           and 406
          Length = 743

 Score =  125 bits (63), Expect = 1e-26
 Identities = 65/66 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgac 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgac 194

                 
Query: 61  ctgctt 66
           ||||||
Sbjct: 193 ctgctt 188
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>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9
          Length = 875

 Score =  125 bits (63), Expect = 1e-26
 Identities = 65/66 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgac 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 374 gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgac 315

                 
Query: 61  ctgctt 66
           ||||||
Sbjct: 314 ctgctt 309
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>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p9-1
          Length = 739

 Score =  125 bits (63), Expect = 1e-26
 Identities = 65/66 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgac 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 499 gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgac 440

                 
Query: 61  ctgctt 66
           ||||||
Sbjct: 439 ctgctt 434
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>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p2-1
          Length = 653

 Score =  123 bits (62), Expect = 6e-26
 Identities = 64/65 (98%)
 Strand = Plus / Minus

                                                                       
Query: 2   aacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacc 61
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 412 aacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacc 353

                
Query: 62  tgctt 66
           |||||
Sbjct: 352 tgctt 348
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>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5
          Length = 845

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 351 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 292

             
Query: 65  tt 66
           ||
Sbjct: 291 tt 290
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>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small
           subunit (rbcS gene)
          Length = 518

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 274 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaagtagtcgacctgc 215

             
Query: 65  tt 66
           ||
Sbjct: 214 tt 213
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>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase
           (RUBISCO) gene, complete cds
          Length = 779

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 341 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaagtagtcgacctgc 282

             
Query: 65  tt 66
           ||
Sbjct: 281 tt 280
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>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO)
            gene, exons 1 and 2
          Length = 2205

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                        
Query: 5    ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
            ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 1265 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 1206

              
Query: 65   tt 66
            ||
Sbjct: 1205 tt 1204
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>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sec-B
          Length = 789

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 561 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 502

             
Query: 65  tt 66
           ||
Sbjct: 501 tt 500
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>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           CS-B2
          Length = 781

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 553 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 494

             
Query: 65  tt 66
           ||
Sbjct: 493 tt 492
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>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Ara-B
          Length = 787

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 559 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 500

             
Query: 65  tt 66
           ||
Sbjct: 499 tt 498
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>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Ura-B
          Length = 787

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 559 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 500

             
Query: 65  tt 66
           ||
Sbjct: 499 tt 498
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>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sea-B
          Length = 728

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 500 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 441

             
Query: 65  tt 66
           ||
Sbjct: 440 tt 439
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>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sha-B
          Length = 792

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 564 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 505

             
Query: 65  tt 66
           ||
Sbjct: 504 tt 503
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>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-B
          Length = 792

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 564 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 505

             
Query: 65  tt 66
           ||
Sbjct: 504 tt 503
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>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe2-B
          Length = 738

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 544 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 485

             
Query: 65  tt 66
           ||
Sbjct: 484 tt 483
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>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe1-B
          Length = 787

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 559 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 500

             
Query: 65  tt 66
           ||
Sbjct: 499 tt 498
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>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Agr-A
          Length = 604

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 376 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 317

             
Query: 65  tt 66
           ||
Sbjct: 316 tt 315
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>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Bic-A
          Length = 605

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 377 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 318

             
Query: 65  tt 66
           ||
Sbjct: 317 tt 316
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>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sha-A
          Length = 605

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 377 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaagtagtcgacctgc 318

             
Query: 65  tt 66
           ||
Sbjct: 317 tt 316
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>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-A3
          Length = 605

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 377 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 318

             
Query: 65  tt 66
           ||
Sbjct: 317 tt 316
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>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-A2
          Length = 605

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 377 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 318

             
Query: 65  tt 66
           ||
Sbjct: 317 tt 316
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>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-A1
          Length = 605

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 377 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 318

             
Query: 65  tt 66
           ||
Sbjct: 317 tt 316
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>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
            carboxylase/oxygenase small subunit, complete cds,
            clone:6, subclone:16
          Length = 5980

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                        
Query: 5    ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
            ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 1019 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 960

              
Query: 65   tt 66
            ||
Sbjct: 959  tt 958



 Score = 83.8 bits (42), Expect = 5e-14
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 8    accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
            ||||||||||| |||||||| |||||||||||||||||||||| ||||| |||||||
Sbjct: 5420 accttgctgaagtcgaggcagggcacccacttggagcggatcaggtagttgacctgc 5364



 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 14   ctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
            |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||
Sbjct: 4071 ctgaactcgaggcagggcactcacttggaggggatcaggtagtcgacctgctt 4019
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>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p13-1
          Length = 985

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 741 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaagtagtcgacctgc 682

             
Query: 65  tt 66
           ||
Sbjct: 681 tt 680
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>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase Small subunit, complete cds,
           clone:p6-1
          Length = 638

 Score =  109 bits (55), Expect = 9e-22
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 394 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 335

             
Query: 65  tt 66
           ||
Sbjct: 334 tt 333
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>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase, small subunit
          Length = 837

 Score =  105 bits (53), Expect = 1e-20
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgac 60
           |||||||||||| || ||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 334 gaacccaacctttctaaactcgaggcagggcacccacttggagcggatcaggtagtcgac 275

                   
Query: 61  ctgcttaa 68
           ||||||||
Sbjct: 274 ctgcttaa 267
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>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Squ-B
          Length = 781

 Score =  103 bits (52), Expect = 5e-20
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                      
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 550 accttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgctt 492
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>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39) (ribulosebisphosphate carboxylase, clone 512)
          Length = 611

 Score =  101 bits (51), Expect = 2e-19
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgac 60
           |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||| ||
Sbjct: 102 gaacccgaccttgctgaactcaaggcaaggcacccacttggagcggatcaggtagtccac 43

                 
Query: 61  ctgctt 66
           ||||||
Sbjct: 42  ctgctt 37
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>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Bic-B
          Length = 783

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 560 ccaaccttgctaaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 501

             
Query: 65  tt 66
           ||
Sbjct: 500 tt 499
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>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-B
          Length = 772

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 544 ccaaccttgctgaactcgaggcagggcacccactttgagcggatcaggtagtcgacctgc 485

             
Query: 65  tt 66
           ||
Sbjct: 484 tt 483
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>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Hor-A
          Length = 605

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||
Sbjct: 377 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgc 318

             
Query: 65  tt 66
           ||
Sbjct: 317 tt 316
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>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sec-A
          Length = 591

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||
Sbjct: 363 ccaaccttgctgaactcgaggcagggtacccacttggagcggatcaggtagtcgacctgc 304

             
Query: 65  tt 66
           ||
Sbjct: 303 tt 302
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>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Ara-A
          Length = 604

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 376 ccaaccttgctgaactcgaggcagggcacccactttgagcggatcaggtagtcgacctgc 317

             
Query: 65  tt 66
           ||
Sbjct: 316 tt 315
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>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Squ-A
          Length = 607

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 379 ccaaccttgctgaactcgaggcagggcacccactttgagcggatcaggtagtcgacctgc 320

             
Query: 65  tt 66
           ||
Sbjct: 319 tt 318
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>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sea-A
          Length = 611

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 383 ccaaccttgctgaactcgaggcagggcacccactttgagcggatcaggtagtcgacctgc 324

             
Query: 65  tt 66
           ||
Sbjct: 323 tt 322
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>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-A3
          Length = 604

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 376 ccaaccttgctgaactcgaggcagggcacccactttgagcggatcaggtagtcgacctgc 317

             
Query: 65  tt 66
           ||
Sbjct: 316 tt 315
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>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-A2
          Length = 604

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 376 ccaaccttgctgaactcgaggcagggcacccactttgagcggatcaggtagtcgacctgc 317

             
Query: 65  tt 66
           ||
Sbjct: 316 tt 315
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>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-A1
          Length = 604

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 376 ccaaccttgctgaactcgaggcagggcacccactttgagcggatcaggtagtcgacctgc 317

             
Query: 65  tt 66
           ||
Sbjct: 316 tt 315
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>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe2-A
          Length = 604

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 376 ccaaccttgctgaactcgaggcagggcacccactttgagcggatcaggtagtcgacctgc 317

             
Query: 65  tt 66
           ||
Sbjct: 316 tt 315
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>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe1-A1
          Length = 604

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 376 ccaaccttgctgaactcgaggcagggcacccactttgagcggatcaggtagtcgacctgc 317

             
Query: 65  tt 66
           ||
Sbjct: 316 tt 315
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>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds
          Length = 604

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 376 ccaaccttgctgaactcgaggcagggcacccactttgagcggatcaggtagtcgacctgc 317

             
Query: 65  tt 66
           ||
Sbjct: 316 tt 315
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>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Bro-B
          Length = 784

 Score =  101 bits (51), Expect = 2e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 556 ccaaccttgctgaactcgaggcacggcacccacttggagcggatcaagtagtcgatctgc 497

             
Query: 65  tt 66
           ||
Sbjct: 496 tt 495
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>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           CS-B1
          Length = 787

 Score = 95.6 bits (48), Expect = 1e-17
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctg 63
           ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||
Sbjct: 559 ccaaccttgctgaactcgaggcagggcacccactttgagcggatcaggtagtcgacctg 501
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>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Dic-B
          Length = 787

 Score = 95.6 bits (48), Expect = 1e-17
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctg 63
           ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||
Sbjct: 559 ccaaccttgctgaactcgaggcagggcacccactttgagcggatcaggtagtcgacctg 501
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>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 93.7 bits (47), Expect = 5e-17
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           |||||||||||||||||||||||||| ||||||||||||||||||| | |||||| ||||
Sbjct: 269 ccaaccttgctgaactcgaggcaaggaacccacttggagcggatcaagaagtcgatctgc 210

             
Query: 65  tt 66
           ||
Sbjct: 209 tt 208
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>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           CS-A
          Length = 605

 Score = 93.7 bits (47), Expect = 5e-17
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||
Sbjct: 377 ccaaccttgctaaactcgaggcagggcacccacttggagcggatcaggtagtctacctgc 318

             
Query: 65  tt 66
           ||
Sbjct: 317 tt 316
to top
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Dic-A
          Length = 605

 Score = 93.7 bits (47), Expect = 5e-17
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||
Sbjct: 377 ccaaccttgctaaactcgaggcagggcacccacttggagcggatcaggtagtctacctgc 318

             
Query: 65  tt 66
           ||
Sbjct: 317 tt 316
to top
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p10-1
          Length = 629

 Score = 93.7 bits (47), Expect = 5e-17
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||
Sbjct: 385 ccaaccttgctaaactcgaggcagggcacccacttggagcggatcaggtagtctacctgc 326

             
Query: 65  tt 66
           ||
Sbjct: 325 tt 324
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>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) gene, partial cds
          Length = 620

 Score = 85.7 bits (43), Expect = 1e-14
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 385 ccaaccttgctgaactcgaggcagggaacccacttggagcggatcaagaagtcgatctgc 326

             
Query: 65  tt 66
           ||
Sbjct: 325 tt 324
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>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 85.7 bits (43), Expect = 1e-14
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 269 ccaaccttgctgaactcgaggcagggaacccacttggagcggatcaagaagtcgatctgc 210

             
Query: 65  tt 66
           ||
Sbjct: 209 tt 208
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>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 85.7 bits (43), Expect = 1e-14
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 269 ccaaccttgctgaactcgaggcagggaacccacttggagcggatcaagaagtcgatctgc 210

             
Query: 65  tt 66
           ||
Sbjct: 209 tt 208
to top
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 600

 Score = 79.8 bits (40), Expect = 8e-13
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                  
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcga 59
           ||||||||||||||||||||||| || ||||||||||||||||||| | ||||||
Sbjct: 365 ccaaccttgctgaactcgaggcagggaacccacttggagcggatcaagaagtcga 311
to top
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit mRNA, complete cds;
           chloroplast
          Length = 860

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           |||||||||||||||||||||||||||||||||||||| || | || ||| |||| ||||
Sbjct: 335 ccaaccttgctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgc 276

             
Query: 65  tt 66
           ||
Sbjct: 275 tt 274
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                            
Query: 5        ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
                |||||||||||||||||||||||||||||||||||||| || | || ||| |||| ||||
Sbjct: 11262067 ccaaccttgctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgc 11262008

                  
Query: 65       tt 66
                ||
Sbjct: 11262007 tt 11262006



 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                           
Query: 8        accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
                |||||||||||||||||||| |||||||||||||| |||| || ||| |||| ||||||
Sbjct: 10080017 accttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgctt 10080075



 Score = 61.9 bits (31), Expect = 2e-07
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                            
Query: 1        gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgac 60
                |||||| ||||| || |||||||||||||||||||| ||||| |||| || ||| |||| 
Sbjct: 11276734 gaacccgaccttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgat 11276675

                      
Query: 61       ctgctt 66
                ||||||
Sbjct: 11276674 ctgctt 11276669



 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                           
Query: 8        accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
                |||||||||||||| | ||||||||||||||| || |||| || ||| |||| ||||||
Sbjct: 11319874 accttgctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgctt 11319816



 Score = 44.1 bits (22), Expect = 0.043
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 17       aactcgaggcaaggcacccact 38
                ||||||||||||||||||||||
Sbjct: 11266666 aactcgaggcaaggcacccact 11266645
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>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 593

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||||||||| || ||||||||||||||||||| | |||| | ||||
Sbjct: 358 ccaaccttgctgaactcgaggcagggaacccacttggagcggatcaagaagtcaatctgc 299

             
Query: 65  tt 66
           ||
Sbjct: 298 tt 297
to top
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 586

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||| ||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 351 ccaaccttgctgaactcaaggcagggaacccacttggagcggatcaagaagtcgatctgc 292

             
Query: 65  tt 66
           ||
Sbjct: 291 tt 290
to top
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full
           insert sequence
          Length = 899

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           |||||||||||||||||||||||||||||||||||||| || | || ||| |||| ||||
Sbjct: 352 ccaaccttgctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgc 293

             
Query: 65  tt 66
           ||
Sbjct: 292 tt 291
to top
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) gene, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 594

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||| ||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 359 ccaaccttgctgaactcaaggcagggaacccacttggagcggatcaagaagtcgatctgc 300

             
Query: 65  tt 66
           ||
Sbjct: 299 tt 298
to top
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||| ||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 269 ccaaccttgctgaactccaggcagggaacccacttggagcggatcaagaagtcgatctgc 210

             
Query: 65  tt 66
           ||
Sbjct: 209 tt 208
to top
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
           carboxylase small subunit (rbcS) mRNA, nuclear gene
           encoding chloroplast protein, partial cds
          Length = 504

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||| ||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 269 ccaaccttgctgaactccaggcagggaacccacttggagcggatcaagaagtcgatctgc 210

             
Query: 65  tt 66
           ||
Sbjct: 209 tt 208
to top
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||| ||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 269 ccaaccttgctgaactccaggcagggaacccacttggagcggatcaagaagtcgatctgc 210

             
Query: 65  tt 66
           ||
Sbjct: 209 tt 208
to top
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||| ||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 269 ccaaccttgctgaactccaggcagggaacccacttggagcggatcaagaagtcgatctgc 210

             
Query: 65  tt 66
           ||
Sbjct: 209 tt 208
to top
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||| ||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 269 ccaaccttgctgaactccaggcagggaacccacttggagcggatcaagaagtcgatctgc 210

             
Query: 65  tt 66
           ||
Sbjct: 209 tt 208
to top
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||| ||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 269 ccaaccttgctgaactccaggcagggaacccacttggagcggatcaagaagtcgatctgc 210

             
Query: 65  tt 66
           ||
Sbjct: 209 tt 208
to top
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||| ||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 269 ccaaccttgctgaactcaaggcagggaacccacttggagcggatcaagaagtcgatctgc 210

             
Query: 65  tt 66
           ||
Sbjct: 209 tt 208
to top
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||| ||||| || ||||||||||||||||||| | |||||| ||||
Sbjct: 269 ccaaccttgctgaactccaggcagggaacccacttggagcggatcaagaagtcgatctgc 210

             
Query: 65  tt 66
           ||
Sbjct: 209 tt 208
to top
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
           carboxylase small subunit (rbcS) mRNA, partial cds
          Length = 504

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                 
Query: 13  gctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||||||| ||||||||||||||||||| | |||||| ||||||
Sbjct: 261 gctgaactcgaggcaaggaacccacttggagcggatcaagaagtcgatctgctt 208
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                            
Query: 5        ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
                |||||||||||||||||||||||||||||||||||||| || | || ||| |||| ||||
Sbjct: 11261738 ccaaccttgctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgc 11261679

                  
Query: 65       tt 66
                ||
Sbjct: 11261678 tt 11261677



 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                           
Query: 8        accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
                |||||||||||||||||||| |||||||||||||| |||| || ||| |||| ||||||
Sbjct: 10079902 accttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgctt 10079960



 Score = 61.9 bits (31), Expect = 2e-07
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                            
Query: 1        gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgac 60
                |||||| ||||| || |||||||||||||||||||| ||||| |||| || ||| |||| 
Sbjct: 11276405 gaacccgaccttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgat 11276346

                      
Query: 61       ctgctt 66
                ||||||
Sbjct: 11276345 ctgctt 11276340



 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                           
Query: 8        accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
                |||||||||||||| | ||||||||||||||| || |||| || ||| |||| ||||||
Sbjct: 11319545 accttgctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgctt 11319487



 Score = 44.1 bits (22), Expect = 0.043
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 17       aactcgaggcaaggcacccact 38
                ||||||||||||||||||||||
Sbjct: 11266337 aactcgaggcaaggcacccact 11266316
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>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 127267

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                          
Query: 5      ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
              |||||||||||||||||||||||||||||||||||||| || | || ||| |||| ||||
Sbjct: 109987 ccaaccttgctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgc 110046

                
Query: 65     tt 66
              ||
Sbjct: 110047 tt 110048



 Score = 61.9 bits (31), Expect = 2e-07
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 1     gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgac 60
             |||||| ||||| || |||||||||||||||||||| ||||| |||| || ||| |||| 
Sbjct: 95320 gaacccgaccttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgat 95379

                   
Query: 61    ctgctt 66
             ||||||
Sbjct: 95380 ctgctt 95385



 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 8     accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
             |||||||||||||| | ||||||||||||||| || |||| || ||| |||| ||||||
Sbjct: 52180 accttgctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgctt 52238



 Score = 44.1 bits (22), Expect = 0.043
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 17     aactcgaggcaaggcacccact 38
              ||||||||||||||||||||||
Sbjct: 105388 aactcgaggcaaggcacccact 105409
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>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 918

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgac 60
           |||||||||||||||||||||||| ||||||||||||||||| || | || ||| |||| 
Sbjct: 340 gaacccaaccttgctgaactcgagacaaggcacccacttggatcgaagcaggtactcgat 281

                 
Query: 61  ctgctt 66
           ||||||
Sbjct: 280 ctgctt 275
to top
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit
           of ribulose-1,5-bisphosphate carboxylase, complete cds,
           clone pOSSS2106
          Length = 895

 Score = 77.8 bits (39), Expect = 3e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           |||||||||||||||||||||||||||||||||||||| || | || ||| |||| ||||
Sbjct: 350 ccaaccttgctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgc 291

             
Query: 65  tt 66
           ||
Sbjct: 290 tt 289
to top
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full
           insert sequence
          Length = 984

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||||||||| |||||||||||||| |||| || ||| |||| ||||||
Sbjct: 491 accttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgctt 433
to top
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full
           insert sequence
          Length = 828

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||||||||| |||||||||||||| |||| || ||| |||| ||||||
Sbjct: 337 accttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgctt 279
to top
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full
           insert sequence
          Length = 2409

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||||||||| |||||||||||||| |||| || ||| |||| ||||||
Sbjct: 338 accttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgctt 280
to top
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||| ||||| || ||||||||||||||||||| | |||||| ||||||
Sbjct: 266 accttgctgaactcaaggcagggaacccacttggagcggatcaagaagtcgatctgctt 208
to top
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full
           insert sequence
          Length = 830

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||||||||| |||||||||||||| |||| || ||| |||| ||||||
Sbjct: 340 accttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgctt 282
to top
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145890

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 8     accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
             |||||||||||||||||||| |||||||||||||| |||| || ||| |||| ||||||
Sbjct: 82604 accttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgctt 82546
to top
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 835

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||||||||| |||||||||||||| |||| || ||| |||| ||||||
Sbjct: 326 accttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgctt 268
to top
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate
           carboxylase/oxygenase (rbcS) mRNA, complete cds
          Length = 808

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||||||||| |||||||||||||| |||| || ||| |||| ||||||
Sbjct: 315 accttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgctt 257
to top
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Ave-A
          Length = 590

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||| ||||| || ||||||||||||||||||| | |||||| ||||||
Sbjct: 359 accttgctgaactccaggcagggaacccacttggagcggatcaggaagtcgatctgctt 301
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>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit
           of ribulose-1,5-bisphosphate carboxylase, complete cds,
           clone pOSSS1139
          Length = 830

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||||||||| |||||||||||||| |||| || ||| |||| ||||||
Sbjct: 335 accttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgctt 277
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>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 69.9 bits (35), Expect = 7e-10
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||| ||||| || ||||||||||||||||||| | | |||| ||||
Sbjct: 269 ccaaccttgctgaactccaggcagggaacccacttggagcggatcaagaattcgatctgc 210

             
Query: 65  tt 66
           ||
Sbjct: 209 tt 208
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>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 854

 Score = 63.9 bits (32), Expect = 5e-08
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcgga 47
           |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 363 accttgctgaactcgaggcagggcacccacttggaacgga 324
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>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full
           insert sequence
          Length = 947

 Score = 61.9 bits (31), Expect = 2e-07
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgac 60
           |||||| ||||| || |||||||||||||||||||| ||||| |||| || ||| |||| 
Sbjct: 356 gaacccgaccttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgat 297

                 
Query: 61  ctgctt 66
           ||||||
Sbjct: 296 ctgctt 291
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>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full
           insert sequence
          Length = 845

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||| | ||||||||||||||| || |||| || ||| |||| ||||||
Sbjct: 345 accttgctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgctt 287
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>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full
           insert sequence
          Length = 1999

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
           |||||||||||||| | ||||||||||||||| || |||| || ||| |||| ||||||
Sbjct: 347 accttgctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgctt 289
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>gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, partial cds
          Length = 195

 Score = 54.0 bits (27), Expect = 4e-05
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 5   ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgc 64
           ||||||||||||||||| | ||| || ||||| |||||||||||||   |||||| ||||
Sbjct: 101 ccaaccttgctgaactccaagcagggaacccatttggagcggatcaaaaagtcgatctgc 42

             
Query: 65  tt 66
           ||
Sbjct: 41  tt 40
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>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate
            carboxylase/oxygenase small subunit gene, complete cds
          Length = 2328

 Score = 54.0 bits (27), Expect = 4e-05
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 9    ccttgctgaactcgaggcaaggcacccacttggagcggatcangtagtcgacctgctt 66
            ||||||||||||||||||| |||||||| |||  ||| | || |||||| ||||||||
Sbjct: 1543 ccttgctgaactcgaggcagggcacccagttgttgcgcagcaggtagtccacctgctt 1486
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>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase
           small subunit (EC 4.1.1.39)
          Length = 1110

 Score = 48.1 bits (24), Expect = 0.003
 Identities = 37/40 (92%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                   
Query: 8   accttgctgaactcgaggcaaggcacccacttggagcgga 47
           |||||||||||||||||||| |||| ||||||||| ||||
Sbjct: 627 accttgctgaactcgaggcagggca-ccacttggaacgga 589
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>emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene)
          Length = 761

 Score = 42.1 bits (21), Expect = 0.17
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 16  gaactcgaggcaaggcacccacttggagcggatcangtagtcga 59
           |||||| |||||||| | ||||||||||||||  | ||||||||
Sbjct: 330 gaactcaaggcaaggaatccacttggagcggagaaggtagtcga 287
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>emb|AJ439989.1|OSA439989 Oryza sativa partial mRNA for ribulose 1,5-bisphosphate
           carboxylase, small subunit (rbpc-L gene)
          Length = 432

 Score = 40.1 bits (20), Expect = 0.67
 Identities = 34/39 (87%)
 Strand = Plus / Minus

                                                  
Query: 9   ccttgctgaactcgaggcaaggcacccacttggagcgga 47
           ||||| ||||||||||||| ||| ||| |||||| ||||
Sbjct: 259 ccttgttgaactcgaggcagggcncccccttggaacgga 221
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>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase
           small subunit (EC 4.1.1.39)
          Length = 1648

 Score = 40.1 bits (20), Expect = 0.67
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   accttgctgaactcgaggca 27
           ||||||||||||||||||||
Sbjct: 931 accttgctgaactcgaggca 912
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>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit
           (RuBPC; EC 4.1.1.39)
          Length = 830

 Score = 40.1 bits (20), Expect = 0.67
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   accttgctgaactcgaggca 27
           ||||||||||||||||||||
Sbjct: 346 accttgctgaactcgaggca 327
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>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small
           subunit, complete cds
          Length = 830

 Score = 40.1 bits (20), Expect = 0.67
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   accttgctgaactcgaggca 27
           ||||||||||||||||||||
Sbjct: 346 accttgctgaactcgaggca 327
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>ref|XM_361365.1| Magnaporthe grisea 70-15 hypothetical protein (MG03839.4) partial
           mRNA
          Length = 813

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 9   ccttgctgaactcgaggca 27
           |||||||||||||||||||
Sbjct: 559 ccttgctgaactcgaggca 541
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>emb|AJ278756.1|AEV278756 Azoarcus evansii pac gene cluster for aerobic phenylacetate catabolism
          Length = 12666

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    cgaggcaaggcacccactt 39
             |||||||||||||||||||
Sbjct: 12091 cgaggcaaggcacccactt 12109
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>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene
          Length = 1274

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 1   gaacccaaccttgctgaactcgaggca 27
           |||||| | ||||||||||||||||||
Sbjct: 601 gaacccgagcttgctgaactcgaggca 575
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>gb|AY103730.1| Zea mays PCO095823 mRNA sequence
          Length = 1172

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 1   gaacccaaccttgctgaactcgaggca 27
           |||||| | ||||||||||||||||||
Sbjct: 473 gaacccgagcttgctgaactcgaggca 447


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 234,671
Number of Sequences: 3902068
Number of extensions: 234671
Number of successful extensions: 14103
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13983
Number of HSP's gapped (non-prelim): 120
length of query: 68
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 47
effective length of database: 17,151,101,840
effective search space: 806101786480
effective search space used: 806101786480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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