Clone Name | rbaak4g22 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 819 bits (413), Expect = 0.0 Identities = 547/588 (93%), Gaps = 7/588 (1%) Strand = Plus / Minus Query: 18 catcttcctcgacctacgttggtaggtgcttacatacatatgctcgtatattcacatatg 77 |||| || ||||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 741 catcctcntcgacctacattggtaggtgcttacatacatatgctcatatattcacatatg 682 Query: 78 attggaacaagaagtaaaattgagaaagcagagctaccgaccgaccaatgtgaactaaca 137 | || | ||||||||| |||| ||||||||| ||||| |||||||||||||| Sbjct: 681 ggtaga-cgagaagtaaacc-gagatagcagagctgccgaca----aatgtgaactaaca 628 Query: 138 tggcatgtatatcggttacttcaacttgcactttatgccttgccggactcctcgcaaccc 197 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 627 tggcatgtatatgggttacttcaacttgcactttatgccttgccggattcctcgcagcnt 568 Query: 198 ggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatg 257 |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 567 ggtggcctgaaggcaatgaagctgacgcactgcacctggcgcatgttgtcgaagccgatg 508 Query: 258 atacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgt 317 | ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 507 acgcggacataggcgtcagggtactccttcttgacctcctccacctcattgagcacctgc 448 Query: 318 gtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtag 377 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 447 gtggcgtcggtgcacccgaacataggcaacttccacattgtccagtatcgaccgtcgtag 388 Query: 378 tacccgggggagctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcag 437 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 tacccgggggagttgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcag 328 Query: 438 ggcacccacttggagcggatcaggtagtcaacctgcttcaggagggccctccgtggtgag 497 ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| Sbjct: 327 ggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-cctccgtggagag 269 Query: 498 gggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcggccacacctgcat 557 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 268 gggtggcaagtaagacagggtctcgaacttcttgatgccctcaattggccacacctgcat 209 Query: 558 gcatctgatccttccgccattgctgacgctgctgaggccggcgctgcc 605 |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 208 gcatctgatccttccgccgttgctgacgctgctgaggccggcgctgcc 161
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 801 bits (404), Expect = 0.0 Identities = 559/605 (92%), Gaps = 7/605 (1%) Strand = Plus / Minus Query: 1 ctatgattctnatatgncatcttcctcgacctacgttggtaggtgcttacatacatatgc 60 |||| ||||| ||||| |||| |||||||||||| |||||||||||||||||||||||| Sbjct: 748 ctataattctcatatg-catcctcctcgacctacattggtaggtgcttacatacatatgt 690 Query: 61 tcgtatattcacatatgattggaacaagaagtaaaattgagaaagcagagctaccgaccg 120 || ||||||||||||||| | |||| |||||||||| |||||||||||||| || ||| Sbjct: 689 tcatatattcacatatgagtagaacgagaagtaaaactgagaaagcagagc---cg-ccg 634 Query: 121 accaatgtgaactaacatggcatgtatatcggttacttcaacttgcactttatgccttgc 180 || ||| ||| |||||||| |||||||||||||||||||||||||||||| | ||||||| Sbjct: 633 acaaatttga-ctaacatgacatgtatatcggttacttcaacttgcacttcaggccttgc 575 Query: 181 cggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgca 240 |||| |||||||| || |||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 574 cggattcctcgcagcctggtggcctgaaggcaatgaagctgacgcattgcacctggcgca 515 Query: 241 ggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcga 300 ||||||||| ||||||| ||||| || || |||||||||||||| || |||||||| | Sbjct: 514 tgttgtcgaaaccgatgacgcggacatacgcatcagggtactccttcttaacctcctcca 455 Query: 301 cctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtcc 360 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cctcgttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtcc 395 Query: 361 agtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaacct 420 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 agtatcgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaacct 335 Query: 421 tgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcagga 480 ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| || Sbjct: 334 tgctgaactcgaggcagggcacccacttggagcggatcaagtagtcgacctgcttcaaga 275 Query: 481 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 540 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 216 Query: 541 atcggccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcg 600 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 215 attggccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggtg 156 Query: 601 ctgcc 605 ||||| Sbjct: 155 ctgcc 151
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 696 bits (351), Expect = 0.0 Identities = 412/431 (95%), Gaps = 1/431 (0%) Strand = Plus / Minus Query: 174 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 455 Query: 234 tgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacc 293 || |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 454 tggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 395 Query: 294 tcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccac 353 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 tcctccacctcgttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccac 335 Query: 354 attgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaag 413 |||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 334 attgtccagtatcgaccgtcatagtatccgggggagctattgtgctcacggaagacgaaa 275 Query: 414 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgc 473 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 274 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaagtagtcgacctgc 215 Query: 474 ttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgat 533 |||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 214 ttcaggaggg-cctccgtggagaggggtggcaggtaagacagggtctcgaacttcttgat 156 Query: 534 gccctcaatcggccacacctgcatgcatctgatccttccgccattgctgacgctgctgag 593 ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 155 gccctcaatcggccacacctgcatgcacctgatccttccgccgttgctgacgctgctgag 96 Query: 594 gccggcgctgc 604 ||||||||||| Sbjct: 95 gccggcgctgc 85
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 652 bits (329), Expect = 0.0 Identities = 360/369 (97%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 546 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 545 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 486 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 485 ttaagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtat 426 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggaggg-c 307 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 306 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247 Query: 546 ccacacctg 554 ||||||||| Sbjct: 246 ccacacctg 238 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcgctg 603 ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggctggcgctg 82
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 636 bits (321), Expect = e-179 Identities = 358/369 (97%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 544 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 365 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 364 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 306 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246 Query: 546 ccacacctg 554 ||||||||| Sbjct: 245 ccacacctg 237 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 636 bits (321), Expect = e-179 Identities = 358/369 (97%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 611 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctgacgcaggttg 552 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||| Sbjct: 551 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctca 492 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 ttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 432 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 372 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | Sbjct: 371 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 313 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 253 Query: 546 ccacacctg 554 ||||||||| Sbjct: 252 ccacacctg 244 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgcggccgaggc 90
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 636 bits (321), Expect = e-179 Identities = 367/381 (96%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 174 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 233 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 634 gccttgccggactcctcgcaacccggtggcctgaatgcgatgaagctgacgcactgcacc 575 Query: 234 tgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacc 293 || |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 574 tggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 515 Query: 294 tcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccac 353 ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 514 tcctccacctcgttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccac 455 Query: 354 attgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaag 413 |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 454 attgtccagtatcgaccgtcgtagtacccggaggagctgttgtgctcacggaagacgaag 395 Query: 414 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgc 473 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 394 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctgc 335 Query: 474 ttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgat 533 |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 334 ttcaggaggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgat 276 Query: 534 gccctcaatcggccacacctg 554 ||||||||||||||||||||| Sbjct: 275 gccctcaatcggccacacctg 255 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 146 acctgcatgcacctgatccttccgccattgctgacgcggccgaggc 101
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 630 bits (318), Expect = e-177 Identities = 370/386 (95%), Gaps = 1/386 (0%) Strand = Plus / Minus Query: 169 tttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcact 228 |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1264 tttaggccttgccagactcctcgcaacccggtggcctgaatgcgatgaagctgacgcact 1205 Query: 229 gcacctgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttt 288 ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| | Sbjct: 1204 gcacctggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttct 1145 Query: 289 tgacctcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagct 348 |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1144 tgacctcctccacctcgttgagcacctgcgtggcgtcggtgcacccgaacataggcagct 1085 Query: 349 tccacattgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaaga 408 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 1084 tccacattgtccagtatcgaccgtcgtagtacccggaggagctgttgtgctcacggaaga 1025 Query: 409 cgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaa 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1024 cgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcga 965 Query: 469 cctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttc 528 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 964 cctgcttcaggaggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttc 906 Query: 529 ttgatgccctcaatcggccacacctg 554 |||||||||||||||||||||||||| Sbjct: 905 ttgatgccctcaatcggccacacctg 880 Score = 379 bits (191), Expect = e-102 Identities = 330/375 (88%), Gaps = 1/375 (0%) Strand = Plus / Minus Query: 174 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 233 ||||||||||||||||| ||| |||| | ||||||| |||||| ||||||| |||||| Sbjct: 5663 gccttgccggactcctcacaagtcggtagactgaaggtgatgaaagtgacgcaatgcacc 5604 Query: 234 tgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacc 293 || | || ||||||||||||| ||||| |||| ||| ||||| |||||||||| |||||| Sbjct: 5603 tggcacatgttgtcgaagccgttgataaggacatagccgtcaaggtactccttcttgacc 5544 Query: 294 tcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccac 353 ||||| ||||| |||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 5543 tcctccacctccttgagcacctgtgtggcgtcagtgcacccgaacataggcaacttccac 5484 Query: 354 attgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaag 413 |||||| ||||| ||| || |||||||| |||||| | ||||||||||||||||||||| Sbjct: 5483 tttgtccggtatcagccatcatagtacccaggggagttattgtgctcacggaagacgaag 5424 Query: 414 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgc 473 | ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5423 ctgaccttgctgaagtcgaggcagggcacccacttggagcggatcaggtagttgacctgc 5364 Query: 474 ttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgat 533 | ||||||| |||| ||| ||||||||||||||||||||||||||| |||||||| || Sbjct: 5363 gtaaggaggg-cctctatggagaggggtggcaagtaagacagggtctcaaacttcttcat 5305 Query: 534 gccctcaatcggcca 548 |||||| ||| |||| Sbjct: 5304 gccctcgatcagcca 5290 Score = 339 bits (171), Expect = 6e-90 Identities = 316/362 (87%), Gaps = 3/362 (0%) Strand = Plus / Minus Query: 193 aacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagc 252 |||| ||||||| ||||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 4301 aaccaggtggcccgaaggtgatgaagctgacgcactacacctggcgcaggttgtcgaagc 4242 Query: 253 cgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgagca 312 ||||||| | ||| |||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 4241 cgatgatgcagacataggcgtcagggtactccttcttgacctcctccacctccttgagca 4182 Query: 313 cctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgt 372 ||| ||| |||||||||||| || ||||| |||||||||||||| ||||| || || Sbjct: 4181 ccttcttggtgtcggtgcacccaaagataggtagcttccacattgtttagtattagcggt 4122 Query: 373 cgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctgaactcga 432 | |||||||| ||||| || ||| |||||||||| | |||||||| || |||||||||| Sbjct: 4121 catagtacccaggggacctattgcgctcacggaatatgaagccaatgttactgaactcga 4062 Query: 433 ggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggccctccgtg 492 |||||||||| ||||||||| ||||||||||||| |||||||| ||||||| ||||| || Sbjct: 4061 ggcagggcactcacttggaggggatcaggtagtcgacctgcttgaggaggg-cctccatg 4003 Query: 493 gtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcggccacacc 552 | ||||| |||||||| |||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 4002 gagagggatggcaagt--gacaggatctcgaacttcttgatgccctcgatcggccaaacc 3945 Query: 553 tg 554 || Sbjct: 3944 tg 3943 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 771 acctgcatgcacctgatccttccgccattgctgacgcggccgaggc 726
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 628 bits (317), Expect = e-177 Identities = 357/369 (96%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 727 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 668 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 ctgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 608 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 548 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 547 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 489 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 429 Query: 546 ccacacctg 554 ||||||||| Sbjct: 428 ccacacctg 420 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcgctg 603 ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggctggcgctg 82
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 620 bits (313), Expect = e-174 Identities = 356/369 (96%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 727 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 668 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 608 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 548 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 547 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 489 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 488 ttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 429 Query: 546 ccacacctg 554 ||||||||| Sbjct: 428 ccacacctg 420 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 620 bits (313), Expect = e-174 Identities = 359/373 (96%), Gaps = 1/373 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacatagtccagtat 425 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 cggccgtcgtagtatccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 365 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246 Query: 546 ccacacctgcatg 558 ||||||||||||| Sbjct: 245 ccacacctgcatg 233 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgcggccgaggc 90
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 620 bits (313), Expect = e-174 Identities = 356/369 (96%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgctgaagctgacgcactgcacctggcgcaggttg 545 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 || |||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 544 tcaaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 484 ttgagcacctgtgtggcgtcggtgcacccgaacatagggagcttccacattgtccagtat 425 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 365 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246 Query: 546 ccacacctg 554 ||||||||| Sbjct: 245 ccacacctg 237 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgcggccgaggc 90
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 615 bits (310), Expect = e-173 Identities = 368/386 (95%), Gaps = 1/386 (0%) Strand = Plus / Minus Query: 169 tttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcact 228 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1510 tttaggccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcact 1451 Query: 229 gcacctgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttt 288 ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| | Sbjct: 1450 gcacctggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttct 1391 Query: 289 tgacctcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagct 348 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1390 tgacctcctccacctcgttgagcacctgtgtggcgtcggtgcacccgaacataggcagct 1331 Query: 349 tccacattgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaaga 408 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 1330 tccacattgtccagtatcgaccgtcgtagtacccgggagagctgttgtgctcacggaaga 1271 Query: 409 cgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaa 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1270 cgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcga 1211 Query: 469 cctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttc 528 |||||||| ||||| | ||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 1210 cctgcttcgagaggg-cttccgtggagaggggtggcaagtaagacagggtctcaaacttc 1152 Query: 529 ttgatgccctcaatcggccacacctg 554 |||||||||||||| ||||||||||| Sbjct: 1151 ttgatgccctcaattggccacacctg 1126 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||| ||||||||||||| ||||| Sbjct: 841 acctgcatgcacctgatccttccgccgttgctgacgctgccgaggc 796
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 613 bits (309), Expect = e-172 Identities = 352/365 (96%), Gaps = 1/365 (0%) Strand = Plus / Minus Query: 190 cgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcga 249 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 785 cgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcga 726 Query: 250 agccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattga 309 ||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 725 agccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcattga 666 Query: 310 gcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggc 369 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 665 gcacctgagtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcgac 606 Query: 370 cgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctgaact 429 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 cgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctgaact 546 Query: 430 cgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggccctcc 489 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 545 cgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-cctcc 487 Query: 490 gtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcggccac 549 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 486 gtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattggccac 427 Query: 550 acctg 554 ||||| Sbjct: 426 acctg 422 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 613 bits (309), Expect = e-172 Identities = 355/369 (96%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 727 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 668 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 608 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 607 cgaccgtcgtagtacccgggggagctgtagtgctcacggaagacgaagccaaccttgctg 548 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 547 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 489 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 488 ttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 429 Query: 546 ccacacctg 554 ||||||||| Sbjct: 428 ccacacctg 420 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 613 bits (309), Expect = e-172 Identities = 355/369 (96%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 733 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 732 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 673 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 613 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 cgaccatcgtagtatccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 553 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 552 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 494 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 493 ttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 434 Query: 546 ccacacctg 554 ||||||||| Sbjct: 433 ccacacctg 425 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcgctg 603 ||||||||| | |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135 acctgcatgtacctgatccttccgccattgctgacgctgccgaggctggcgctg 82
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 613 bits (309), Expect = e-172 Identities = 355/369 (96%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 733 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 732 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 673 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 613 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 cgaccatcgtagtatccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 553 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 552 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 494 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 493 ttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 434 Query: 546 ccacacctg 554 ||||||||| Sbjct: 433 ccacacctg 425 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcgctg 603 ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggctggcgctg 82
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 613 bits (309), Expect = e-172 Identities = 355/369 (96%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 607 tcctcgcaacctggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 548 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 547 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 488 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 ttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 428 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 368 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | Sbjct: 367 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 309 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 249 Query: 546 ccacacctg 554 ||||||||| Sbjct: 248 ccacacctg 240 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 605 bits (305), Expect = e-170 Identities = 354/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 722 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 721 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 662 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 661 ttgagcacctgtgtggcgtcggtgcacccaaacatgggcagcttccacattgtccagtat 602 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 542 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 541 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 483 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 482 ttccgtggagaggggtggcaagtaagacaaggtctcgaacttcttgatgccctcaattgg 423 Query: 546 ccacacctg 554 ||||||||| Sbjct: 422 ccacacctg 414 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcgctg 603 ||||||||||| ||||||||||| |||||||||||||||| ||||| ||||||| Sbjct: 135 acctgcatgcacctgatccttcccccattgctgacgctgccgaggctggcgctg 82
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 605 bits (305), Expect = e-170 Identities = 354/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||||| Sbjct: 545 tcgaagccgatgacgcggacataagcgtcagggtactccttcttgacctcctcaacctcg 486 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 426 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgctttaggaggg-c 307 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 306 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247 Query: 546 ccacacctg 554 ||||||||| Sbjct: 246 ccacacctg 238 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 605 bits (305), Expect = e-170 Identities = 354/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246 Query: 546 ccacacctg 554 ||||||||| Sbjct: 245 ccacacctg 237 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgcggccgaggc 90
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 605 bits (305), Expect = e-170 Identities = 363/381 (95%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 174 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 233 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 981 gccttgccggactcctcgcaacccggtggcctgaaggcaatgaagctgacgcactgcacc 922 Query: 234 tgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacc 293 || || ||||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 921 tggcgtaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 862 Query: 294 tcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccac 353 ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 861 tcctccacctcgttgagcacctgtgtagcgtcggtgcacccgaacataggcagcttccac 802 Query: 354 attgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaag 413 |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 801 attgtccagtatcgaccatcgtagtacccgggggagctgttgtgctcacggaaaacgaag 742 Query: 414 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgc 473 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 741 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaagtagtcgacctgc 682 Query: 474 ttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgat 533 |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct: 681 ttcaggaggg-cctccgtggagaggggtggcaagtaagacagagtctcgaacttcttgat 623 Query: 534 gccctcaatcggccacacctg 554 ||||||||||||||||||||| Sbjct: 622 gccctcaatcggccacacctg 602 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcgctgc 604 ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 149 acctgcatgcacctgatccttccgccgttgctgacgctgctgaggccggcgctgc 95
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 601 bits (303), Expect = e-168 Identities = 397/427 (92%), Gaps = 1/427 (0%) Strand = Plus / Minus Query: 169 tttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcact 228 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 615 tttatgccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcact 556 Query: 229 gcacctgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttt 288 ||||||| |||| ||||||||| |||||||| |||||||| ||||||||||||||||| | Sbjct: 555 gcacctggcgcatgttgtcgaatccgatgatgcggacgtacgcgtcagggtactccttct 496 Query: 289 tgacctcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagct 348 |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 495 tgacctcctccacctcgttgatcacctgtgtggcgtcggtgcacccgaacataggcagct 436 Query: 349 tccacattgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaaga 408 |||||||||||||||| ||||| |||||||||||||| || ||||||||||||||||| Sbjct: 435 tccacattgtccagtaccggccatcgtagtacccgggagacgcgttgtgctcacggaaga 376 Query: 409 cgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaa 468 ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 375 tgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcga 316 Query: 469 cctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttc 528 ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 315 cctgcttgaggaggg-cctccgtggtgagcggtggcaagtaagacagggtctcgaacttc 257 Query: 529 ttgatgccctcaatcggccacacctgcatgcatctgatccttccgccattgctgacgctg 588 ||||||||||| || ||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 256 ttgatgccctcgatgggccacacctgcatgcacctgatccttccaccgttgctgacgctg 197 Query: 589 ctgaggc 595 | ||||| Sbjct: 196 ccgaggc 190
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 597 bits (301), Expect = e-167 Identities = 353/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacataggtagcttccacattgtccagtat 426 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 cgtccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgctttaggaggg-c 307 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 306 ctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247 Query: 546 ccacacctg 554 ||||||||| Sbjct: 246 ccacacctg 238 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcgctg 603 ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggctggcgctg 82
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 597 bits (301), Expect = e-167 Identities = 353/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacataggtagcttccacattgtccagtat 426 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 cgtccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgctttaggaggg-c 307 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 306 ctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247 Query: 546 ccacacctg 554 ||||||||| Sbjct: 246 ccacacctg 238 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 597 bits (301), Expect = e-167 Identities = 353/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacataggtagcttccacattgtccagtat 426 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 cgtccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgctttaggaggg-c 307 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 306 ctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247 Query: 546 ccacacctg 554 ||||||||| Sbjct: 246 ccacacctg 238 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 597 bits (301), Expect = e-167 Identities = 353/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcccaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246 Query: 546 ccacacctg 554 ||||||||| Sbjct: 245 ccacacctg 237 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgcggccgaggc 90
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 597 bits (301), Expect = e-167 Identities = 353/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| |||||||||| ||||||||| ||||||||||| ||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagagtactccttcttgacctcctccacctcg 485 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246 Query: 546 ccacacctg 554 ||||||||| Sbjct: 245 ccacacctg 237 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgcggccgaggc 90
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 597 bits (301), Expect = e-167 Identities = 353/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttg 545 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246 Query: 546 ccacacctg 554 ||||||||| Sbjct: 245 ccacacctg 237 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgcggccgaggc 90
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 597 bits (301), Expect = e-167 Identities = 353/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttg 545 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246 Query: 546 ccacacctg 554 ||||||||| Sbjct: 245 ccacacctg 237 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgcggccgaggc 90
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 595 bits (300), Expect = e-167 Identities = 349/364 (95%), Gaps = 1/364 (0%) Strand = Plus / Minus Query: 191 gcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaa 250 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 783 gcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaa 724 Query: 251 gccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgag 310 |||||||| |||||| |||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 723 gccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcattgag 664 Query: 311 cacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggcc 370 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 663 cacctgtgtggcgtcggtgcaaccgaacataggcagcttccacattgtccagtatcgact 604 Query: 371 gtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctgaactc 430 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 603 atcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctaaactc 544 Query: 431 gaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggccctccg 490 |||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||| Sbjct: 543 gaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-cttccg 485 Query: 491 tggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcggccaca 550 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 484 tggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattggccaca 425 Query: 551 cctg 554 |||| Sbjct: 424 cctg 421 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 589 bits (297), Expect = e-165 Identities = 352/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 722 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 721 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 662 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 661 ttgagcacctgtgtggcgtcggtgcacccgaacatgggcagcttccacattgtccagtat 602 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 601 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgatgcctaccttgctg 542 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 541 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 483 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 482 ttccgtggagaggggtggcaagtaagacaaggtctcgaacttcttgatgccctcaattgg 423 Query: 546 ccacacctg 554 ||||||||| Sbjct: 422 ccacacctg 414 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 589 bits (297), Expect = e-165 Identities = 352/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 728 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 669 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||||| Sbjct: 668 tcgaagccgatgacgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 609 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 608 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 549 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 cgaccgtcatagtaaccaggggagctgttgtgctcacggaagacgaagccaaccttgctg 489 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 488 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 430 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 429 ctccgtggagaggggtggcaagtaagatagggtctcgaacttcttgatgccctcaattgg 370 Query: 546 ccacacctg 554 ||||||||| Sbjct: 369 ccacacctg 361 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 589 bits (297), Expect = e-165 Identities = 361/381 (94%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 174 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 233 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 625 gccttgccggactcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacc 566 Query: 234 tgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacc 293 || |||||||||||||||||| ||| |||||| ||||| |||||||||||||| |||||| Sbjct: 565 tggcgcaggttgtcgaagccgttgacacggacataggcatcagggtactccttcttgacc 506 Query: 294 tcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccac 353 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 505 tcctccacctcgttgagcacttgcgtggcgtcggtgcacccgaacataggcagcttccac 446 Query: 354 attgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaag 413 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 445 attgtccagtatcgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaag 386 Query: 414 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgc 473 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 385 ccaaccttgctaaactcgaggcagggcacccacttggagcggatcaggtagtctacctgc 326 Query: 474 ttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgat 533 || ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 325 tttaggaggg-cctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgat 267 Query: 534 gccctcaatcggccacacctg 554 |||||||||||||||||||| Sbjct: 266 accctcaatcggccacacctg 246 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattg 579 ||||||||||| |||||||||||||||||| Sbjct: 143 acctgcatgcacctgatccttccgccattg 114
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 587 bits (296), Expect = e-164 Identities = 351/368 (95%), Gaps = 1/368 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 772 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 713 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 712 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 653 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 593 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 592 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 533 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | Sbjct: 532 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 474 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 473 ctccgtggataggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 414 Query: 546 ccacacct 553 |||||||| Sbjct: 413 ccacacct 406 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 581 bits (293), Expect = e-162 Identities = 351/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 486 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 426 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 cgaccatcgtagtatccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 |||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||| | Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaagtagtcgacctgctttaggaggg-c 307 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||| |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 306 ctctgtggagaggggtggcaagtaagacagggtctcgaatttcttgataccctcaatcgg 247 Query: 546 ccacacctg 554 ||||||||| Sbjct: 246 ccacacctg 238 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 579 bits (292), Expect = e-162 Identities = 350/368 (95%), Gaps = 1/368 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 727 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 668 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 667 atcagcacctgtgtggcgtcagtgcacccgaacataggcagcttccacattgtccagtat 608 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 548 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| | Sbjct: 547 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgtttcaggaggg-c 489 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 488 ctccgtggataggggtggcaggtaagacagggtctcgaacttcttgatgccctcaattgg 429 Query: 546 ccacacct 553 |||||||| Sbjct: 428 ccacacct 421 Score = 83.8 bits (42), Expect = 6e-13 Identities = 45/46 (97%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgctgaggc 90
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 579 bits (292), Expect = e-162 Identities = 350/368 (95%), Gaps = 1/368 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctataggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 727 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 668 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 667 ttcagcacctgtgtggcgtcagtgcacccgaacataggcagcttccacattgtccagtat 608 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 548 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| | Sbjct: 547 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgtttcaggaggg-c 489 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 488 ctccgtggataggggtggcaggtaagacagggtctcgaacttcttgatgccctcaattgg 429 Query: 546 ccacacct 553 |||||||| Sbjct: 428 ccacacct 421 Score = 83.8 bits (42), Expect = 6e-13 Identities = 45/46 (97%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgctgaggc 90
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 573 bits (289), Expect = e-160 Identities = 350/369 (94%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 591 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 532 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||| Sbjct: 531 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctca 472 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 471 ttgagcacctgagtggcgtccgtgcagccgaacataggcagcttccacattgtccagtac 412 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 411 cggccgtcgtagtaaccgggggagctgttgtgctcgcggaagacgaagccaaccttgctg 352 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 |||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||| | Sbjct: 351 aactcgaggcagggtacccacttggagcggatcaggtagtcgacctgcttcaagaggg-c 293 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 ttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 233 Query: 546 ccacacctg 554 ||||||||| Sbjct: 232 ccacacctg 224 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||| ||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgttgccgaggc 90
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 573 bits (289), Expect = e-160 Identities = 350/369 (94%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 545 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 486 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 ttgagcacttgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 426 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 425 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgcta 366 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtctacctgctttaggaggg-c 307 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 306 ctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247 Query: 546 ccacacctg 554 ||||||||| Sbjct: 246 ccacacctg 238 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgcggccgaggc 90
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 573 bits (289), Expect = e-160 Identities = 350/369 (94%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| |||||| ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 545 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 486 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 ttgagcacttgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 426 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 425 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgcta 366 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtctacctgctttaggaggg-c 307 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 306 ctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247 Query: 546 ccacacctg 554 ||||||||| Sbjct: 246 ccacacctg 238 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgcggccgaggc 90
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 569 bits (287), Expect = e-159 Identities = 324/335 (96%), Gaps = 1/335 (0%) Strand = Plus / Minus Query: 220 tgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggt 279 |||||||||||||||| ||||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 738 tgacgcactgcacctggcgcaggttgtcaaagccgatgacacggacataggcgtcagggt 679 Query: 280 actcctttttgacctcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaaca 339 ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 678 actccttcttgacctcctccacctcgctgagcacctgtgtggcgtcggtgcacccgaaca 619 Query: 340 taggcagcttccacattgtccagtatcggccgtcgtagtacccgggggagctgttgtgct 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 taggcagcttccacattgtccagtatcggccgtcgtagtacccgggggagctgttgtgct 559 Query: 400 cacggaagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatca 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 cacggaagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatca 499 Query: 460 ggtagtcaacctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtc 519 ||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 498 ggtagtcgacctgcttcaggaggg-cctccgtggagaggggtggcaagtaagacagggtc 440 Query: 520 tcgaacttcttgatgccctcaatcggccacacctg 554 ||||||||||||||||||||||||||||||||||| Sbjct: 439 tcgaacttcttgatgccctcaatcggccacacctg 405 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgctgccgaggc 90
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 531 bits (268), Expect = e-148 Identities = 383/420 (91%), Gaps = 1/420 (0%) Strand = Plus / Minus Query: 169 tttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcact 228 ||||||||||||| ||||||| ||| || |||||| |||| ||||||||||||||||||| Sbjct: 549 tttatgccttgcccgactcctggcagcctggtggcttgaaagcgatgaagctgacgcact 490 Query: 229 gcacctgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttt 288 |||||||||||| ||||||||| |||||||| ||||| || ||||||||||||||||| | Sbjct: 489 gcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttct 430 Query: 289 tgacctcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagct 348 |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 429 tgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagct 370 Query: 349 tccacattgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaaga 408 |||||||||||||||| ||||| ||||||||||| || || ||||||||||||||||| Sbjct: 369 tccacattgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaaga 310 Query: 409 cgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaa 468 ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 309 tgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcga 250 Query: 469 cctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttc 528 ||||||| ||||||| |||||||| |||| ||||| | |||||||||||||||||||||| Sbjct: 249 cctgcttaaggaggg-cctccgtgctgagtggtggaaggtaagacagggtctcgaacttc 191 Query: 529 ttgatgccctcaatcggccacacctgcatgcatctgatccttccgccattgctgacgctg 588 ||||||||||| || ||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 190 ttgatgccctcgatgggccacacctgcatgcacctgatccttccaccgttgctgacgctg 131
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 505 bits (255), Expect = e-140 Identities = 352/383 (91%), Gaps = 1/383 (0%) Strand = Plus / Minus Query: 174 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 233 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 735 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 676 Query: 234 tgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacc 293 ||||||| ||||||||| |||||||| ||||| || ||||||||||||||||| |||||| Sbjct: 675 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 616 Query: 294 tcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccac 353 ||||| ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 615 tcctccacctcgttgatcacctgtgtggcgtcagtgcacccgaacataggcagcttccac 556 Query: 354 attgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaag 413 |||||||| || ||||| ||||||||||| || || ||||||||||||||||| ||| Sbjct: 555 attgtccaataccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 496 Query: 414 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgc 473 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 495 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgc 436 Query: 474 ttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgat 533 || ||||||| |||||||| |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 435 ttgaggaggg-cctccgtgctgagcggtggcaggtaagacagggtctcgaacttcttgat 377 Query: 534 gccctcaatcggccacacctgca 556 |||||| || ||||||||||||| Sbjct: 376 gccctcgatgggccacacctgca 354 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| ||||||||||| || ||||||||||||| ||||| Sbjct: 149 acctgcatgcacctgatccttccaccgttgctgacgctgccgaggc 104
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 490 bits (247), Expect = e-135 Identities = 374/415 (90%), Gaps = 1/415 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| ||||||||| |||||||||||||||||||||||||||||||||| | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 377 ttgatcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||| | |||| |||||| ||||||| |||||||||||||||| Sbjct: 317 ctgccgtcgtagtatccgggagtgctgccgtgctcgcggaagatgaagccaaccttgctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||| |||||||| ||||||||||||||||||| | |||| | |||||||||||||| | Sbjct: 257 aactccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-c 199 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| | ||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 198 ctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatcgg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcg 600 ||||||||||||||||| ||| ||||| || ||||||||||||| ||||||||| Sbjct: 138 ccacacctgcatgcatcggattcttccaccgttgctgacgctgccaaggccggcg 84
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 484 bits (244), Expect = e-133 Identities = 371/412 (90%), Gaps = 1/412 (0%) Strand = Plus / Minus Query: 189 tcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcg 248 ||||| ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 494 tcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttgtcg 435 Query: 249 aagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattg 308 ||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 434 aagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctccttg 375 Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcgg 368 | |||||||| |||||||||||| |||||||| ||||||||||||||||||||||| | | Sbjct: 374 atcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtacctg 315 Query: 369 ccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctgaac 428 ||||||||||| ||||| | |||| |||||| ||||||| ||||||||||||||||||| Sbjct: 314 ccgtcgtagtatccgggagtgctgccgtgctcgcggaagatgaagccaaccttgctgaac 255 Query: 429 tcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggccctc 488 || |||||||| ||||||||||||||||||| | |||| | |||||||||||||| |||| Sbjct: 254 tccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-cctc 196 Query: 489 cgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcggcca 548 | | ||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 ctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatcggcca 136 Query: 549 cacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcg 600 |||||||||||||| ||| ||||| || ||||||||||||| ||||||||| Sbjct: 135 cacctgcatgcatcggattcttccaccgttgctgacgctgccaaggccggcg 84
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 482 bits (243), Expect = e-133 Identities = 373/415 (89%), Gaps = 1/415 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| ||||||||| ||||||||||||||||||| |||||||| ||||| | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttgatgacctgtgaggcgtcggtgcacccgaacatgggcagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||||| |||| |||||| ||||||| |||||||||||||||| Sbjct: 317 ctgccgtcgtagtatccgggggtgctgccgtgctcgcggaagatgaagccaaccttgctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||| |||||||| ||||||||||||||||||| | |||| | |||||||||||||| | Sbjct: 257 aactcaaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-c 199 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| | ||| ||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 198 ctcctctgagagtggtggcaggtaagaaagggtctcgaacttcttgatgccctcaatcgg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcg 600 ||||||||||||||||||||| ||||| || ||||||||||||| ||||| |||| Sbjct: 138 ccacacctgcatgcatctgattcttccaccgttgctgacgctgccgaggctggcg 84
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 482 bits (243), Expect = e-133 Identities = 349/383 (91%), Gaps = 1/383 (0%) Strand = Plus / Minus Query: 174 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 233 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 649 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 590 Query: 234 tgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacc 293 || |||| ||||||||| |||||||| ||||| || ||||||||||||||||| |||||| Sbjct: 589 tggcgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 530 Query: 294 tcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccac 353 ||||| ||||| |||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 529 tcctccacctcgttgatcacctgcgtggcgtcggtgcacccgaacataggcagcttccac 470 Query: 354 attgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaag 413 ||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||| || Sbjct: 469 attgtccagtaccggccatcgtagtacccaggggatgcgttgtgctcacggaagataaac 410 Query: 414 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgc 473 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 409 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgc 350 Query: 474 ttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgat 533 || ||||||| |||| ||| |||| ||||||| ||| |||||||||||||||||||| || Sbjct: 349 ttgaggaggg-cctctgtgctgagcggtggcaggtaggacagggtctcgaacttcttaat 291 Query: 534 gccctcaatcggccacacctgca 556 |||||| || ||||||||||||| Sbjct: 290 gccctcgatgggccacacctgca 268 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 |||||||||| ||||||||||| || ||||||||||||| ||||| Sbjct: 149 acctgcatgcgcctgatccttccaccgttgctgacgctgccgaggc 104
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 480 bits (242), Expect = e-132 Identities = 372/414 (89%), Gaps = 1/414 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| ||||||||| |||||||||||||||||||||||||||||||||| | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| || || |||||||||||||||| ||| ||||||||||| ||||| Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacctcctccacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 377 ttgatgacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||| | |||| |||||| ||||||| |||||||||||||||| Sbjct: 317 ctgccgtcgtagtatccgggagtgctgccgtgctcgcggaagatgaagccaaccttgctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||| |||||||| ||||||||||||||||||| | |||| | |||||||||||||| | Sbjct: 257 aactccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-c 199 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| | ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 198 ctcctccgagagtggtggcaagtaagaaagggtctcgaacttcttgatgccctcaatcgg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggc 599 ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 138 ccacacctgcatgcacctgatccttccgccgttgctgacgctgccgaggccggc 85
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 480 bits (242), Expect = e-132 Identities = 372/414 (89%), Gaps = 1/414 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| ||||||||| |||||||||||||||||||||||||||||||||| | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| || || |||||||||||||||| ||| ||||||||||| ||||| Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacctcctccacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 377 ttgatgacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||| | |||| |||||| ||||||| |||||||||||||||| Sbjct: 317 ctgccgtcgtagtatccgggagtgctgccgtgctcgcggaagatgaagccaaccttgctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||| |||||||| ||||||||||||||||||| | |||| | |||||||||||||| | Sbjct: 257 aactccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-c 199 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| | ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 198 ctcctccgagagtggtggcaagtaagaaagggtctcgaacttcttgatgccctcaatcgg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggc 599 ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 138 ccacacctgcatgcacctgatccttccgccgttgctgacgctgccgaggccggc 85
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 472 bits (238), Expect = e-130 Identities = 371/414 (89%), Gaps = 1/414 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| ||||||||| |||||||||||||||||||||||||||||||||| | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||||||||||| || || |||||||||||||||| ||| ||||| ||||| ||||| Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacgtcctccacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 377 ttgatgacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||| | |||| |||||| ||||||| |||||||||||||||| Sbjct: 317 ctgccgtcgtagtatccgggagtgctgccgtgctcgcggaagatgaagccaaccttgctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||| |||||||| ||||||||||||||||||| | |||| | |||||||||||||| | Sbjct: 257 aactccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-c 199 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| | ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 198 ctcctccgagagtggtggcaagtaagaaagggtctcgaacttcttgatgccctcaatcgg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggc 599 ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 138 ccacacctgcatgcacctgatccttccgccgttgctgacgctgccgaggccggc 85
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 470 bits (237), Expect = e-129 Identities = 337/369 (91%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 784 tcctcgcaacccggtggcttgaaggcgatgaagctgacgcactgcacctgacgcaagtta 725 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||| | ||| Sbjct: 724 tcgaaaccgatgatgcggacataggcgtcagggtactccttcttgacctcctccagctcc 665 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| |||||||| ||| |||||||| ||||||||||||| |||||||||||||||||| Sbjct: 664 ttgatcacctgtgaggcatcggtgcatccgaacataggcaacttccacattgtccagtaa 605 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 ||||| |||||||| || || || ||||||||||||||||||||||||||||||||| Sbjct: 604 cggccatcgtagtatccaggagatgcattgtgctcacggaagacgaagccaaccttgctg 545 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||| |||||||||||||||||||||| |||||| | |||||||||||||| | Sbjct: 544 aactcgaggcacggcacccacttggagcggatcaagtagtcgatctgcttcaggaggg-c 486 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 485 ctcggtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 426 Query: 546 ccacacctg 554 ||||||||| Sbjct: 425 ccacacctg 417 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggcc 596 ||||||||||| |||||||||||||| |||||||||||| |||||| Sbjct: 132 acctgcatgcacctgatccttccgccgctgctgacgctgccgaggcc 86
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 466 bits (235), Expect = e-128 Identities = 371/415 (89%), Gaps = 1/415 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| || |||||| ||||||||||||||||||| |||||||||||||| | |||| Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacctgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 377 ttgatcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||| | |||| || ||| ||||||| |||||||||||||||| Sbjct: 317 ctgccgtcgtagtatccgggagtgctgccgtactcgcggaagatgaagccaaccttgctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||| |||||||| ||||||||||||||||||| | |||| | |||||||||||||| | Sbjct: 257 aactccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-c 199 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| | ||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 198 ctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatcgg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcg 600 ||||||||||||||||| ||| ||||| || ||||||||||||| ||||||||| Sbjct: 138 ccacacctgcatgcatcggattcttccaccgttgctgacgctgccaaggccggcg 84
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 464 bits (234), Expect = e-127 Identities = 370/414 (89%), Gaps = 1/414 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| || |||||| |||| ||||||||||||||||||||||| ||||| | |||| Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 |||||||||||||| || || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| |||||||| |||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 377 ttgatcacctgtgaggcgtcagtgcagccgaacatgggcagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||| | |||| |||||| ||||||| |||||||||||||||| Sbjct: 317 ctgccgtcgtagtatccgggagtgctgccgtgctcgcggaagatgaagccaaccttgctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 |||||||||||||| ||||||||||||||||||| | |||| | |||||||||||||| | Sbjct: 257 aactcgaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-c 199 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| | || ||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 198 ctcctctgacagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaattgg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggc 599 ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 138 ccacacctgcatgcacctgatccttccgccgttgctgacgctgccgaggccggc 85
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 458 bits (231), Expect = e-125 Identities = 370/415 (89%), Gaps = 1/415 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| ||||||||| |||||||||||||||||||||||||||| ||||| | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 |||||||||||||| || || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcaacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 377 ttgatcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||| | |||| |||||| ||||||| |||||||||||||||| Sbjct: 317 ctgccgtcgtagtatccgggagtgctgccgtgctcgcggaagatgaagccaaccttgctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||| || ||||||||||||||||||| | |||| | |||||||||||||||| Sbjct: 257 aactcgaggcaaggaacccacttggagcggatcaagaagtcgatctgcttcaggagggcc 198 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 ||| | ||| || |||| |||||||||||||||||||||||||||||||||||| || Sbjct: 197 -tcctctgagagtggcggcaggtaagacagggtctcgaacttcttgatgccctcaatagg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcg 600 ||||||||||||||||| ||| ||||| || ||||||||||||| ||||||||| Sbjct: 138 ccacacctgcatgcatcggattcttccaccgttgctgacgctgccaaggccggcg 84
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 456 bits (230), Expect = e-125 Identities = 369/414 (89%), Gaps = 1/414 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| || |||||| |||| ||||||||||||||||||||||| ||||| | |||| Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 |||||||||||||| || || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 ||| |||||||| |||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 377 ctgatcacctgtgaggcgtcagtgcagccgaacatgggcagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||| | |||| |||||| ||||||| |||||||||||||||| Sbjct: 317 ctgccgtcgtagtatccgggagtgctgccgtgctcgcggaagatgaagccaaccttgctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 |||||||||||||| ||||||||||||||||||| | |||| | |||||||||||||| | Sbjct: 257 aactcgaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-c 199 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| | || ||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 198 ctcctctgacagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaattgg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggc 599 ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 138 ccacacctgcatgcacctgatccttccgccgttgctgacgctgccgaggccggc 85
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 456 bits (230), Expect = e-125 Identities = 366/410 (89%), Gaps = 1/410 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| ||||||||| |||||||||||||||||||||||||||| ||||| | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctctacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| ||||| | ||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 377 ttgatgacctgcgaggcatcggtgcagccgaacatgggcagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||||| |||| |||||| ||||||| |||||| ||||||||| Sbjct: 317 ctgccgtcgtagtatccgggggtgctgccgtgctcgcggaagatgaagcccaccttgctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||| |||||||| ||||||||||||||||||| | |||| | |||||||||||||| | Sbjct: 257 aactcaaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-c 199 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| | ||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 198 ctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatcgg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||||||| ||||||||||| || ||||||||| ||| ||||| Sbjct: 138 ccacacctgcatgcacctgatccttccaccgttgctgacgttgccgaggc 89
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 450 bits (227), Expect = e-123 Identities = 369/415 (88%), Gaps = 1/415 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| ||||||||| ||||||||||||| |||||||||||||| ||||| | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaaactgacgcactgcacttgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 |||||||||||||| ||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactctttcttgacctcctccacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttgatcacctgtgaggcgtcggtgcacccgaacatgggcagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||| ||||| || || | |||| |||||| ||||||| |||||||||||||||| Sbjct: 317 ctgccgtcatagtatccaggagtgctgccgtgctcgcggaagatgaagccaaccttgctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||| |||||||| ||||||||||||||||||| | |||| | |||||||||||||| | Sbjct: 257 aactccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-c 199 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| ||||| ||||||| |||||||||||||||||| ||||||||||||||||| || Sbjct: 198 ctcctctgtgagtggtggcaggtaagacagggtctcgaatttcttgatgccctcaatagg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcg 600 ||||||||||||||||| ||| ||||| || ||||||||||||| ||||||||| Sbjct: 138 ccacacctgcatgcatcggattcttccaccgttgctgacgctgccaaggccggcg 84
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 448 bits (226), Expect = e-122 Identities = 365/410 (89%), Gaps = 1/410 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| || |||||| ||||||||||||||||||| |||||||| ||||| | |||| Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 || ||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 437 tctaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 377 ttgatcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||| | |||| |||||| ||||||| |||||||||||||||| Sbjct: 317 ctgccgtcgtagtatccgggagtgctgccgtgctcgcggaagatgaagccaaccttgctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||| |||||||| ||||||||||||||||||| | | || | |||||||||||||| | Sbjct: 257 aactccaggcagggaacccacttggagcggatcaagaattcgatctgcttcaggaggg-c 199 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| | ||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 198 ctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatcgg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||||||||| ||| ||||| || ||||||||||||| ||||| Sbjct: 138 ccacacctgcatgcatcggattcttccaccgttgctgacgctgccgaggc 89
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 442 bits (223), Expect = e-121 Identities = 377/427 (88%), Gaps = 1/427 (0%) Strand = Plus / Minus Query: 169 tttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcact 228 |||| |||||||||||||||||||| ||||||||| || ||||||||||||||||| ||| Sbjct: 575 tttaggccttgccggactcctcgcagcccggtggcttggaggcgatgaagctgacggact 516 Query: 229 gcacctgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttt 288 |||||||||||| ||||||||| |||||||| ||| |||| ||||||||||||||| Sbjct: 515 gcacctgacgcatgttgtcgaatccgatgatgcggcaataggggtcagggtactccttcc 456 Query: 289 tgacctcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagct 348 |||||||||| ||||| || |||||| |||| | ||| ||| ||||||||||| || | Sbjct: 455 tgacctcctccacctcggggatcacctgggtgggggcggggcatccgaacatagggagtt 396 Query: 349 tccacattgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaaga 408 |||||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||| Sbjct: 395 tccacattgtccagtaccggccatcgtagtacccaggggatacgttgtgttcacggaaga 336 Query: 409 cgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaa 468 ||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 335 tgaacccaacctttctaaactcgaggcagggcacccacttggagcggatcaggtagtcga 276 Query: 469 cctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttc 528 ||||||| |||| ||||||||||| |||| ||||||||||| |||||||||||||||||| Sbjct: 275 cctgcttaagga-ggccctccgtgctgagcggtggcaagtaggacagggtctcgaacttc 217 Query: 529 ttgatgccctcaatcggccacacctgcatgcatctgatccttccgccattgctgacgctg 588 ||||| ||||| || ||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 216 ttgataccctcgatgggccacacctgcatgcacctgatccttccaccgttgctgacgctg 157 Query: 589 ctgaggc 595 | ||||| Sbjct: 156 ccgaggc 150
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 434 bits (219), Expect = e-118 Identities = 313/343 (91%), Gaps = 1/343 (0%) Strand = Plus / Minus Query: 169 tttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcact 228 |||| |||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 343 tttaggccttgccggactcctcgcagcccggtggcttgaaggcaatgaagctgacgcact 284 Query: 229 gcacctgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttt 288 ||||||| |||| ||||||||| |||||||| |||||||| ||||||||||||||||| | Sbjct: 283 gcacctggcgcatgttgtcgaatccgatgatgcggacgtacgcgtcagggtactccttct 224 Query: 289 tgacctcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagct 348 |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 223 tgacctcctccacctcgttgatcacctgtgtggcgtcggtgcacccgaacataggcagct 164 Query: 349 tccacattgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaaga 408 |||||||||||||||| |||||||||||||||||||| || |||||||||||||||| Sbjct: 163 tccacattgtccagtagcggccgtcgtagtacccgggagacgcattgtgctcacggaaga 104 Query: 409 cgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaa 468 ||| || |||||||||||||| ||||| ||||||||||||||||||||||||||||| | Sbjct: 103 tgaacccgaccttgctgaactcaaggcaaggcacccacttggagcggatcaggtagtcca 44 Query: 469 cctgcttcaggagggccctccgtggtgaggggtggcaagtaag 511 ||||||| ||||||| |||||||| |||| ||||||| ||||| Sbjct: 43 cctgcttgaggaggg-cctccgtgctgagcggtggcaggtaag 2
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 434 bits (219), Expect = e-118 Identities = 367/415 (88%), Gaps = 1/415 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| ||||||||| |||||||||||||||||||||||||||||||||| | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| |||||| | |||||||||||| |||||||| || |||||||||||||||||||| Sbjct: 377 ttgatcacctgggaggcgtcggtgcatccgaacatggggagcttccacattgtccagtac 318 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||| ||||| || || | |||| |||||| ||||||| ||||||| | | |||| Sbjct: 317 ctgccgtcatagtatccaggagtgctgccgtgctcgcggaagatgaagccaccttggctg 258 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||||||||| || ||||||||||||||||||| | |||| | |||||||||||||| | Sbjct: 257 aactcgaggcaaggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-c 199 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 198 ctcctctgtgagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatagg 139 Query: 546 ccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcg 600 ||||||||||||||||| ||| ||||| || ||||||||||||| ||||||||| Sbjct: 138 ccacacctgcatgcatcggattcttccaccgttgctgacgctgccaaggccggcg 84
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 432 bits (218), Expect = e-118 Identities = 336/374 (89%), Gaps = 1/374 (0%) Strand = Plus / Minus Query: 180 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgc 239 ||||| |||||||| || |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 585 ccggattcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacgg 526 Query: 240 aggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcg 299 | |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 525 atgttgtcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctcc 466 Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| |||| |||||||| ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 465 acctccttgatcacctgtgaggcgtcggtgcacccgaacatgggcaacttccacattgtc 406 Query: 360 cagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaacc 419 ||||| | |||||||||||| ||||||| |||| |||||| ||||||| |||||||||| Sbjct: 405 cagtacctgccgtcgtagtatccgggggtgctgccgtgctcgcggaagatgaagccaacc 346 Query: 420 ttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcagg 479 ||||||||||| |||||||| ||||||||||||||||||| | |||| | |||||| ||| Sbjct: 345 ttgctgaactcaaggcagggaacccacttggagcggatcaagaagtcgatctgctttagg 286 Query: 480 agggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctc 539 |||| ||||| | ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 285 aggg-cctcctctgagagtggtggcaagtaagaaagggtctcgaacttcttgatgccctc 227 Query: 540 aatcggccacacct 553 |||||||||||||| Sbjct: 226 aatcggccacacct 213 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||||||||||||||| || ||||||||||||| ||||| Sbjct: 134 acctgcatgcatctgatccttccaccgttgctgacgctgccgaggc 89
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 414 bits (209), Expect = e-112 Identities = 330/369 (89%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| || |||||| |||||||||||||||||||||||||||| ||||| | |||| Sbjct: 593 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 534 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 533 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 474 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| ||||| | |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 473 ttgatgacctgggaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 414 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||||| |||| |||||| ||||||| |||||||||||||||| Sbjct: 413 ctgccgtcgtagtatccgggggtgctgccgtgctcgcggaagatgaagccaaccttgctg 354 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 |||||||||||||| ||||||||||||||||||| | |||| | ||| |||||||||| | Sbjct: 353 aactcgaggcagggaacccacttggagcggatcaagaagtcgatctgtttcaggaggg-c 295 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| || ||| ||||||| |||||| ||||||||||||||||||||||||||| |||| Sbjct: 294 ctcctcggagagtggtggcaggtaagaaagggtctcgaacttcttgatgccctcagtcgg 235 Query: 546 ccacacctg 554 ||||||||| Sbjct: 234 ccacacctg 226 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgc 589 ||||||||||||||||| ||||| || ||||||||||||| Sbjct: 134 acctgcatgcatctgattcttccaccgttgctgacgctgc 95
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 410 bits (207), Expect = e-111 Identities = 355/403 (88%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||| | | | Sbjct: 725 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 666 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 |||||||||||||||||||||||| | || ||||||||| |||| ||| ||||||||| | Sbjct: 665 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 606 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 605 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 546 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||| |||||||| |||| || ||||||| ||||||| || |||||| Sbjct: 545 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 486 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 ||||||||||||||||||||||||||||| |||| |||||| || | ||||||||||| | Sbjct: 485 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 427 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 426 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 367 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 366 cggccacacctgcatgcacctgatcctgccgccattgctgacg 324
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 410 bits (207), Expect = e-111 Identities = 355/403 (88%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||| | | | Sbjct: 571 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 512 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 |||||||||||||||||||||||| | || ||||||||| |||| ||| ||||||||| | Sbjct: 511 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 452 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 451 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 392 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||| |||||||| |||| || ||||||| ||||||| || |||||| Sbjct: 391 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 332 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 ||||||||||||||||||||||||||||| |||| |||||| || | ||||||||||| | Sbjct: 331 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 273 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 272 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 213 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 212 cggccacacctgcatgcacctgatcctgccgccattgctgacg 170
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 410 bits (207), Expect = e-111 Identities = 334/375 (89%), Gaps = 1/375 (0%) Strand = Plus / Minus Query: 180 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgc 239 ||||| |||||||| ||||||||| |||| ||||||||||||||||||||||| ||||| Sbjct: 619 ccggattcctcgcagcccggtggcttgaatgcgatgaagctgacgcactgcacttgacgg 560 Query: 240 aggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcg 299 | |||||||||||||||||| || || |||||||||||||||||||| ||||||||||| Sbjct: 559 atgttgtcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcc 500 Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| |||| |||||||| |||||| ||||| |||||||| |||||||||||||||||| Sbjct: 499 acctccttgatcacctgtgaggcgtcagtgcagccgaacatgggcagcttccacattgtc 440 Query: 360 cagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaacc 419 ||||| | |||||||||||| ||||| | |||| |||||| ||||||| |||||||||| Sbjct: 439 cagtacctgccgtcgtagtatccgggagtgctgccgtgctcgcggaagatgaagccaacc 380 Query: 420 ttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcagg 479 |||||||||||||||||||| ||||||||||||||||||| | |||| | |||||||||| Sbjct: 379 ttgctgaactcgaggcagggaacccacttggagcggatcaagaagtcgatctgcttcagg 320 Query: 480 agggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctc 539 |||| ||||| | || ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 319 aggg-cctcctctgacagtggtggcaggtaagacagggtctcgaacttcttgatgccctc 261 Query: 540 aatcggccacacctg 554 ||| ||||||||||| Sbjct: 260 aattggccacacctg 246 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggc 599 ||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 134 acctgcatgcacctgatccttccgccgttgctgacgctgccgaggccggc 85
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 410 bits (207), Expect = e-111 Identities = 355/403 (88%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||| | | | Sbjct: 572 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 513 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 |||||||||||||||||||||||| | || ||||||||| |||| ||| ||||||||| | Sbjct: 512 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 453 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 452 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 393 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||| |||||||| |||| || ||||||| ||||||| || |||||| Sbjct: 392 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 333 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 ||||||||||||||||||||||||||||| |||| |||||| || | ||||||||||| | Sbjct: 332 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 274 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 273 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 214 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 213 cggccacacctgcatgcacctgatcctgccgccattgctgacg 171
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 410 bits (207), Expect = e-111 Identities = 355/403 (88%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||| | | | Sbjct: 574 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 515 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 |||||||||||||||||||||||| | || ||||||||| |||| ||| ||||||||| | Sbjct: 514 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 455 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 454 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 395 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||| |||||||| |||| || ||||||| ||||||| || |||||| Sbjct: 394 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 335 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 ||||||||||||||||||||||||||||| |||| |||||| || | ||||||||||| | Sbjct: 334 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 276 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 275 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 216 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 215 cggccacacctgcatgcacctgatcctgccgccattgctgacg 173
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 410 bits (207), Expect = e-111 Identities = 355/403 (88%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||| | | | Sbjct: 569 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 510 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 |||||||||||||||||||||||| | || ||||||||| |||| ||| ||||||||| | Sbjct: 509 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 450 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 449 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 390 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||| |||||||| |||| || ||||||| ||||||| || |||||| Sbjct: 389 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 330 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 ||||||||||||||||||||||||||||| |||| |||||| || | ||||||||||| | Sbjct: 329 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 271 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 270 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 211 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 210 cggccacacctgcatgcacctgatcctgccgccattgctgacg 168
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 406 bits (205), Expect = e-110 Identities = 329/369 (89%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| || |||||| |||||||||||||||||||||||||||| ||||| | |||| Sbjct: 587 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 528 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 527 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 468 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| ||||||| |||||| ||||| |||||||| |||| |||||||||||||||||| Sbjct: 467 ttgatgacctgtgaggcgtctgtgcagccgaacatgggcaacttccacattgtccagtac 408 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||||| |||| |||| | ||||||| |||||||||||||||| Sbjct: 407 ctgccgtcgtagtatccgggggtgctgccgtgcacgcggaagatgaagccaaccttgctg 348 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||| |||||||| ||||||||||||||||||| | |||| | |||||||||||||| | Sbjct: 347 aactcaaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-c 289 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| | ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 288 ctcctcagagagtggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 229 Query: 546 ccacacctg 554 ||||||||| Sbjct: 228 ccacacctg 220 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggc 599 ||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 134 acctgcatgcacctgatccttccgccgttgctgacgctgccgaggccggc 85
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 402 bits (203), Expect = e-109 Identities = 354/403 (87%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||| | | | Sbjct: 549 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctaacg 490 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 |||||||||||||||||||||||| | || ||||||||| |||| ||| ||||||||| | Sbjct: 489 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 430 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 429 tccttgagcacctgggtggcgtcggtgcacccgaacatgggcagcttccacatggtccag 370 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | |||||||||||| || ||||| ||| || ||||||| |||| || || |||||| Sbjct: 369 tacctgccgtcgtagtatccaggggacttgtggttctcacggtagacaaatccgaccttg 310 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 ||||||||||||||||||||||||||||| |||| |||||| || | ||||||||||| | Sbjct: 309 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 251 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 250 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 191 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 190 cggccacacctgcatgcacctgatcctgccgccattgctgacg 148
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 394 bits (199), Expect = e-106 Identities = 332/375 (88%), Gaps = 1/375 (0%) Strand = Plus / Minus Query: 180 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgc 239 ||||| |||||||| || |||||| |||| ||||||||||||||||||||||| || || Sbjct: 592 ccggattcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttggcgg 533 Query: 240 aggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcg 299 | |||||||||||||||||| || || |||||||||||||||||||| ||||||||||| Sbjct: 532 atgttgtcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcc 473 Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| |||| |||||||| ||| || ||||| |||||||| |||||||||||||||||| Sbjct: 472 acctccttgatcacctgtgaggcatcagtgcagccgaacatgggcagcttccacattgtc 413 Query: 360 cagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaacc 419 ||||| | ||| |||||||| ||||| | |||| |||||| ||||||| |||||||||| Sbjct: 412 cagtacctgccatcgtagtatccgggagtgctgccgtgctcgcggaagatgaagccaacc 353 Query: 420 ttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcagg 479 |||||||||||||||||||| ||||||||||||||||||| | |||||| |||||||||| Sbjct: 352 ttgctgaactcgaggcagggaacccacttggagcggatcaagaagtcaatctgcttcagg 293 Query: 480 agggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctc 539 |||| ||||| | ||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 292 aggg-cctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctc 234 Query: 540 aatcggccacacctg 554 ||||||||| ||||| Sbjct: 233 aatcggccatacctg 219 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgc 589 ||||||||||||||||| ||||| || ||||||||||||| Sbjct: 134 acctgcatgcatctgattcttccaccgttgctgacgctgc 95
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 394 bits (199), Expect = e-106 Identities = 353/403 (87%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||| ||||| ||||| ||| || ||||||||||||||| | ||||||||| | | | Sbjct: 597 gactcttcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 538 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 |||||||||||||||||||||||| | || ||||||||| |||| ||| ||||||||| | Sbjct: 537 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 478 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 477 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 418 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||| |||||||| |||| || ||||||| |||| || || |||||| Sbjct: 417 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacaaatccgaccttg 358 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 ||||||||||||||||||||||||||||| |||| ||||| || | ||||||||||| | Sbjct: 357 ctgaactcgaggcagggcacccacttggaacggaggaggtactcgatctgcttcagga-g 299 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| |||||| ||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 298 gtcctccacggtgagcggtggcaggtaagagagggtctcgaacttcttgatgccctcaat 239 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 238 cggccacacctgcatgcacctgatcctgccgccattgctgacg 196
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 391 bits (197), Expect = e-105 Identities = 327/369 (88%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 186 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttg 245 |||||||| || |||||| |||||||||||||||||||||||||||||||||| | |||| Sbjct: 590 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 531 Query: 246 tcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctca 305 ||||| |||||||| ||||| |||||||||||||||||||| || |||||||| ||||| Sbjct: 530 tcgaaaccgatgatgcggacataggcgtcagggtactccttcttcacctcctccacctcc 471 Query: 306 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 365 |||| ||||| | |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 470 ttgatgacctgggaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 411 Query: 366 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 425 | |||||||||||| ||||| | |||| |||||||||||||| |||||| ||||||||| Sbjct: 410 ctgccgtcgtagtatccgggagtgctgccgtgctcacggaagatgaagcccaccttgctg 351 Query: 426 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||| |||||||| ||||||||||||||||||||| |||| | |||||||| ||||| | Sbjct: 350 aactccaggcagggaacccacttggagcggatcaggaagtcgatctgcttcaagaggg-c 292 Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| | || ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 291 ctcctctgacagtggtggcagataagacagggtctcgaacttcttgatgccctcaatcgg 232 Query: 546 ccacacctg 554 ||||||||| Sbjct: 231 ccacacctg 223 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcg 600 ||||||||||||||||||||||| || ||||||||| ||| |||||||||| Sbjct: 135 acctgcatgcatctgatccttccaccgttgctgacgttgccgaggccggcg 85
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 387 bits (195), Expect = e-104 Identities = 352/403 (87%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||| ||||| ||| || |||||||||| |||| | ||||||||| | | | Sbjct: 560 gactcctcgcagcccgggggcttgtaggcgatgaaactgatgagctgcacctgcctgacg 501 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 |||||||||||||||||||||||| | || ||||||| | |||| ||| ||||||||| | Sbjct: 500 ttgtcgaagccgatgatacggacgaatgcatcagggttcgccttcttggcctcctcgagc 441 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 440 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 381 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| ||||| || |||||||| |||| || ||||||| ||||||| || |||||| Sbjct: 380 tacctgccatcgtaatatccgggggatctgtggttctcacggtagacgaatccgaccttg 321 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 ||||||||||||||||||||||||||||| |||| |||||| || | ||||||||||| | Sbjct: 320 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 262 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 261 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 202 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 201 cggccacacctgcatgcacctgatcctgccgccattgctgacg 159
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 363 bits (183), Expect = 4e-97 Identities = 325/371 (87%), Gaps = 1/371 (0%) Strand = Plus / Plus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||| | | | Sbjct: 10079783 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 10079842 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 |||||||||||||||||||||||| | || ||||||||| |||| ||| ||||||||| | Sbjct: 10079843 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 10079902 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 10079903 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 10079962 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||| |||||||| |||| || ||||||| ||||||| || |||||| Sbjct: 10079963 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 10080022 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 ||||||||||||||||||||||||||||| |||| |||||| || | ||||||||||| | Sbjct: 10080023 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 10080081 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 10080082 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 10080141 Query: 543 cggccacacct 553 ||||||||||| Sbjct: 10080142 cggccacacct 10080152 Score = 285 bits (144), Expect = 8e-74 Identities = 316/372 (84%), Gaps = 1/372 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 |||||||||||||| || ||| || ||||||||||||| | |||||||||| | | | Sbjct: 11262298 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 11262239 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 ||||||||||||||||||||||| |||| || ||||| |||| ||| ||||||||| | Sbjct: 11262238 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 11262179 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| ||||| |||||||| |||||||| |||||||||||||| ||||| Sbjct: 11262178 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 11262119 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||||||||| || |||| || ||||||| ||||||| ||||||||| Sbjct: 11262118 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 11262059 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 |||||||||||||| |||||||||||||| || | |||||| || | |||||||| | | Sbjct: 11262058 ctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaag 11262000 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 11261999 atcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaat 11261940 Query: 543 cggccacacctg 554 ||||||||||| Sbjct: 11261939 tggccacacctg 11261928 Score = 240 bits (121), Expect = 4e-60 Identities = 314/377 (83%), Gaps = 1/377 (0%) Strand = Plus / Minus Query: 179 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacg 238 ||||||||||||||||||||| ||| || ||||||||||||| | |||||||||| | Sbjct: 11276965 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 11276906 Query: 239 caggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctc 298 | |||||||||||||||||| || || | || || || || |||| ||| ||||||| Sbjct: 11276905 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 11276846 Query: 299 gacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgt 358 || ||| ||||||||||| ||||| || ||||| ||||||||||||||||||||||| || Sbjct: 11276845 gagctccttgagcacctgggtggcatcagtgcatccgaacataggcagcttccacatggt 11276786 Query: 359 ccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaac 418 |||||| | ||| || |||||||| || || |||| || ||||||| ||||||| || || Sbjct: 11276785 ccagtacctgccatcatagtacccaggagacctgtggttctcacggtagacgaacccgac 11276726 Query: 419 cttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcag 478 ||| || ||||||||||| |||||||| ||||| |||| |||||| || | |||||||| Sbjct: 11276725 cttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgatctgcttcaa 11276666 Query: 479 gagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccct 538 || || |||| ||||| ||||||| ||| ||||||||||| |||||||||||||| | Sbjct: 11276665 ga-ggtcctcgaccgtgagcggtggcaggtacgacagggtctcaaacttcttgatgcctt 11276607 Query: 539 caatcggccacacctgc 555 ||||||||||||||||| Sbjct: 11276606 caatcggccacacctgc 11276590 Score = 190 bits (96), Expect = 4e-45 Identities = 304/372 (81%), Gaps = 1/372 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||||||||||||| | | ||||||||||||| |||||||||| | | | Sbjct: 11320108 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 11320049 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 ||||| ||||| ||||| || ||| |||| |||||||| |||| || ||||||||| | Sbjct: 11320048 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 11319989 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || |||||||| || ||||| |||||||| || ||||| ||||| |||||||| |||||| Sbjct: 11319988 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 11319929 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||||| ||||| ||||| || |||| | ||||||| ||||||| || |||||| Sbjct: 11319928 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 11319869 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 |||||||| | ||| ||||||||||| || |||| |||||| || | |||||||| | | Sbjct: 11319868 ctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgcttca-aaag 11319810 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| || | || |||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 11319809 gtcctccactgtcaatggcggcaagtacgacagagtctcgaacttcttaatgccctcaat 11319750 Query: 543 cggccacacctg 554 |||||||||||| Sbjct: 11319749 cggccacacctg 11319738 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacg 585 |||||||||||||||||||||||||||||||||||| Sbjct: 11319639 acctgcatgcatctgatccttccgccattgctgacg 11319604 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcgctg 603 |||||||| || ||||||||||| || ||||||||||||| ||||||||||||| Sbjct: 11276478 acctgcatacagctgatccttccaccgttgctgacgctgccgaggccggcgctg 11276425 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacg 585 ||||||||||| ||||||||||||||||||||||| Sbjct: 11261821 acctgcatgcacttgatccttccgccattgctgacg 11261786 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 550 acctgcatgcatctgatccttccgccattgctgacg 585 ||||||||||| |||||||| ||||||||||||||| Sbjct: 10080252 acctgcatgcacctgatcctgccgccattgctgacg 10080287 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 517 gtctcgaacttcttgatgccctcaatcggccacacct 553 |||||||||||||| |||| |||| ||||||||||| Sbjct: 11266576 gtctcgaacttcttcttgccatcaaccggccacacct 11266540
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 363 bits (183), Expect = 4e-97 Identities = 325/371 (87%), Gaps = 1/371 (0%) Strand = Plus / Plus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||| | | | Sbjct: 10079668 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 10079727 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 |||||||||||||||||||||||| | || ||||||||| |||| ||| ||||||||| | Sbjct: 10079728 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 10079787 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 10079788 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 10079847 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||| |||||||| |||| || ||||||| ||||||| || |||||| Sbjct: 10079848 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 10079907 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 ||||||||||||||||||||||||||||| |||| |||||| || | ||||||||||| | Sbjct: 10079908 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 10079966 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 10079967 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 10080026 Query: 543 cggccacacct 553 ||||||||||| Sbjct: 10080027 cggccacacct 10080037 Score = 285 bits (144), Expect = 8e-74 Identities = 316/372 (84%), Gaps = 1/372 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 |||||||||||||| || ||| || ||||||||||||| | |||||||||| | | | Sbjct: 11261969 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 11261910 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 ||||||||||||||||||||||| |||| || ||||| |||| ||| ||||||||| | Sbjct: 11261909 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 11261850 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| ||||| |||||||| |||||||| |||||||||||||| ||||| Sbjct: 11261849 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 11261790 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||||||||| || |||| || ||||||| ||||||| ||||||||| Sbjct: 11261789 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 11261730 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 |||||||||||||| |||||||||||||| || | |||||| || | |||||||| | | Sbjct: 11261729 ctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaag 11261671 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 11261670 atcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaat 11261611 Query: 543 cggccacacctg 554 ||||||||||| Sbjct: 11261610 tggccacacctg 11261599 Score = 240 bits (121), Expect = 4e-60 Identities = 314/377 (83%), Gaps = 1/377 (0%) Strand = Plus / Minus Query: 179 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacg 238 ||||||||||||||||||||| ||| || ||||||||||||| | |||||||||| | Sbjct: 11276636 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 11276577 Query: 239 caggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctc 298 | |||||||||||||||||| || || | || || || || |||| ||| ||||||| Sbjct: 11276576 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 11276517 Query: 299 gacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgt 358 || ||| ||||||||||| ||||| || ||||| ||||||||||||||||||||||| || Sbjct: 11276516 gagctccttgagcacctgggtggcatcagtgcatccgaacataggcagcttccacatggt 11276457 Query: 359 ccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaac 418 |||||| | ||| || |||||||| || || |||| || ||||||| ||||||| || || Sbjct: 11276456 ccagtacctgccatcatagtacccaggagacctgtggttctcacggtagacgaacccgac 11276397 Query: 419 cttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcag 478 ||| || ||||||||||| |||||||| ||||| |||| |||||| || | |||||||| Sbjct: 11276396 cttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgatctgcttcaa 11276337 Query: 479 gagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccct 538 || || |||| ||||| ||||||| ||| ||||||||||| |||||||||||||| | Sbjct: 11276336 ga-ggtcctcgaccgtgagcggtggcaggtacgacagggtctcaaacttcttgatgcctt 11276278 Query: 539 caatcggccacacctgc 555 ||||||||||||||||| Sbjct: 11276277 caatcggccacacctgc 11276261 Score = 190 bits (96), Expect = 4e-45 Identities = 304/372 (81%), Gaps = 1/372 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||||||||||||| | | ||||||||||||| |||||||||| | | | Sbjct: 11319779 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 11319720 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 ||||| ||||| ||||| || ||| |||| |||||||| |||| || ||||||||| | Sbjct: 11319719 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 11319660 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || |||||||| || ||||| |||||||| || ||||| ||||| |||||||| |||||| Sbjct: 11319659 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 11319600 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||||| ||||| ||||| || |||| | ||||||| ||||||| || |||||| Sbjct: 11319599 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 11319540 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 |||||||| | ||| ||||||||||| || |||| |||||| || | |||||||| | | Sbjct: 11319539 ctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgcttca-aaag 11319481 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| || | || |||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 11319480 gtcctccactgtcaatggcggcaagtacgacagagtctcgaacttcttaatgccctcaat 11319421 Query: 543 cggccacacctg 554 |||||||||||| Sbjct: 11319420 cggccacacctg 11319409 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacg 585 |||||||||||||||||||||||||||||||||||| Sbjct: 11319310 acctgcatgcatctgatccttccgccattgctgacg 11319275 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcgctg 603 |||||||| || ||||||||||| || ||||||||||||| ||||||||||||| Sbjct: 11276149 acctgcatacagctgatccttccaccgttgctgacgctgccgaggccggcgctg 11276096 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacg 585 ||||||||||| ||||||||||||||||||||||| Sbjct: 11261492 acctgcatgcacttgatccttccgccattgctgacg 11261457 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 550 acctgcatgcatctgatccttccgccattgctgacg 585 ||||||||||| |||||||| ||||||||||||||| Sbjct: 10080137 acctgcatgcacctgatcctgccgccattgctgacg 10080172 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 517 gtctcgaacttcttgatgccctcaatcggccacacct 553 |||||||||||||| |||| |||| ||||||||||| Sbjct: 11266247 gtctcgaacttcttcttgccatcaaccggccacacct 11266211
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 363 bits (183), Expect = 4e-97 Identities = 325/371 (87%), Gaps = 1/371 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||| | | | Sbjct: 82838 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 82779 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 |||||||||||||||||||||||| | || ||||||||| |||| ||| ||||||||| | Sbjct: 82778 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 82719 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 82718 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 82659 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||| |||||||| |||| || ||||||| ||||||| || |||||| Sbjct: 82658 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 82599 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 ||||||||||||||||||||||||||||| |||| |||||| || | ||||||||||| | Sbjct: 82598 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 82540 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 82539 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 82480 Query: 543 cggccacacct 553 ||||||||||| Sbjct: 82479 cggccacacct 82469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacg 585 ||||||||||| |||||||| ||||||||||||||| Sbjct: 82369 acctgcatgcacctgatcctgccgccattgctgacg 82334
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 331 bits (167), Expect = 2e-87 Identities = 345/403 (85%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 |||||||||||||| || ||| || ||||||||||||| | |||||||||| | | | Sbjct: 566 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 507 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 ||||||||||||||||||||||| |||| || ||||| |||| ||| ||||||||| | Sbjct: 506 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 447 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| ||||| |||||||| |||||||| |||||||||||||| ||||| Sbjct: 446 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 387 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||||||||| || |||| || ||||||| ||||||| ||||||||| Sbjct: 386 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 327 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 |||||||||||||| |||||||||||||| || | |||||| || | |||||||| | | Sbjct: 326 ctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaag 268 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 267 atcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaat 208 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 207 tggccacacctgcatgcacttgatccttccgccattgctgacg 165
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 331 bits (167), Expect = 2e-87 Identities = 345/403 (85%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 |||||||||||||| || ||| || ||||||||||||| | |||||||||| | | | Sbjct: 583 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 524 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 ||||||||||||||||||||||| |||| || ||||| |||| ||| ||||||||| | Sbjct: 523 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 464 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| ||||| |||||||| |||||||| |||||||||||||| ||||| Sbjct: 463 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 404 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||||||||| || |||| || ||||||| ||||||| ||||||||| Sbjct: 403 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 344 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 |||||||||||||| |||||||||||||| || | |||||| || | |||||||| | | Sbjct: 343 ctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaag 285 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 284 atcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaat 225 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 224 tggccacacctgcatgcacttgatccttccgccattgctgacg 182
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 307 bits (155), Expect = 2e-80 Identities = 342/403 (84%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 |||||||||||||| || ||| || ||||||||||||| | |||||||||| | | | Sbjct: 581 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 522 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 |||||||||||||||||||||| |||| || ||||| |||| ||| ||||||||| | Sbjct: 521 ttgtcgaagccgatgatacggataaaggcatcggggtaggccttcttggcctcctcgagc 462 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| ||||| |||||||| |||||||| |||||||||||||| ||||| Sbjct: 461 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 402 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||||||||| || |||| || ||| ||| ||||||| ||||||||| Sbjct: 401 tacctgccatcgtagtacccgggagacctgtggttctcgcggtagacgaatccaaccttg 342 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 |||||||||||||| |||||||||||||| || | |||||| || | |||||||| | | Sbjct: 341 ctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaag 283 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 282 atcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaat 223 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 ||||||||||||||| | ||||||||||||||||||||||| Sbjct: 222 tggccacacctgcatgaacttgatccttccgccattgctgacg 180
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 295 bits (149), Expect = 9e-77 Identities = 357/425 (84%), Gaps = 1/425 (0%) Strand = Plus / Minus Query: 179 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacg 238 ||||||||||||||||||||| ||| || ||||||||||||| | |||||||||| | Sbjct: 587 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 528 Query: 239 caggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctc 298 | |||||||||||||||||| || || | || || || || |||| ||| ||||||| Sbjct: 527 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 468 Query: 299 gacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgt 358 || ||| ||||||||||| ||||| || ||||| ||||||||||||||||||||||| || Sbjct: 467 gagctccttgagcacctgggtggcatcagtgcatccgaacataggcagcttccacatggt 408 Query: 359 ccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaac 418 |||||| | ||| || |||||||| || || |||| || ||||||| ||||||| || || Sbjct: 407 ccagtacctgccatcatagtacccaggagacctgtggttctcacggtagacgaacccgac 348 Query: 419 cttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcag 478 ||| || ||||||||||| |||||||| ||||| |||| |||||| || | |||||||| Sbjct: 347 cttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgatctgcttcaa 288 Query: 479 gagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccct 538 || || |||| ||||| ||||||| ||| ||||||||||| |||||||||||||| | Sbjct: 287 ga-ggtcctcgaccgtgagcggtggcaggtacgacagggtctcaaacttcttgatgcctt 229 Query: 539 caatcggccacacctgcatgcatctgatccttccgccattgctgacgctgctgaggccgg 598 ||||||||||||||||||| || ||||||||||| || ||||||||||||| |||||||| Sbjct: 228 caatcggccacacctgcatacagctgatccttccaccgttgctgacgctgccgaggccgg 169 Query: 599 cgctg 603 ||||| Sbjct: 168 cgctg 164
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 291 bits (147), Expect = 1e-75 Identities = 300/347 (86%), Gaps = 3/347 (0%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 ||||||||||||||| | ||||||||| | | ||||||||||||||||||||||||| Sbjct: 836 aggcgatgaagctgatgagctgcacctgcctaacgttgtcgaagccgatgatacggacga 777 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 | || ||||||||| |||| ||| ||||||||| ||| |||| ||||| |||||||||| Sbjct: 776 atgcatcagggtacgccttcttggcctcctcgagctccttgacgacctgggtggcgtcgg 717 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggggg 387 ||||||||||||| |||||||||||||| |||||||| | |||||||||||| || |||| Sbjct: 716 tgcacccgaacatgggcagcttccacatggtccagtacctgccgtcgtagtatccagggg 657 Query: 388 agctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggcacccact 447 | ||| || ||||||| |||| || || ||||||||||||||||||||||||| ||||| Sbjct: 656 acttgtggttctcacggtagacaaatccgaccttgctgaactcgaggcagggca-ccact 598 Query: 448 tggagcggatc-aggtagtcaacctgcttcaggagggccctccgtggtgaggggtggcaa 506 |||| |||| | ||||| || | ||||||||||| || ||||| |||||| ||||||| Sbjct: 597 tggaacggagctaggtactcgatctgcttcagga-ggtcctccacggtgagcggtggcag 539 Query: 507 gtaagacagggtctcgaacttcttgatgccctcaatcggccacacct 553 ||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 538 gtaggagagggtctcgaacttcttgatgccctcaatcggccacacct 492 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccat 577 ||||||||||| |||||||| ||||||| Sbjct: 403 acctgcatgcacctgatcctgccgccat 376
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 285 bits (144), Expect = 8e-74 Identities = 316/372 (84%), Gaps = 1/372 (0%) Strand = Plus / Plus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 |||||||||||||| || ||| || ||||||||||||| | |||||||||| | | | Sbjct: 109756 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 109815 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 ||||||||||||||||||||||| |||| || ||||| |||| ||| ||||||||| | Sbjct: 109816 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 109875 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || ||||||||||| ||||| |||||||| |||||||| |||||||||||||| ||||| Sbjct: 109876 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 109935 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||| |||||||||||||| || |||| || ||||||| ||||||| ||||||||| Sbjct: 109936 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 109995 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 |||||||||||||| |||||||||||||| || | |||||| || | |||||||| | | Sbjct: 109996 ctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaag 110054 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||| Sbjct: 110055 atcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaat 110114 Query: 543 cggccacacctg 554 ||||||||||| Sbjct: 110115 tggccacacctg 110126 Score = 240 bits (121), Expect = 4e-60 Identities = 314/377 (83%), Gaps = 1/377 (0%) Strand = Plus / Plus Query: 179 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacg 238 ||||||||||||||||||||| ||| || ||||||||||||| | |||||||||| | Sbjct: 95089 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 95148 Query: 239 caggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctc 298 | |||||||||||||||||| || || | || || || || |||| ||| ||||||| Sbjct: 95149 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 95208 Query: 299 gacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgt 358 || ||| ||||||||||| ||||| || ||||| ||||||||||||||||||||||| || Sbjct: 95209 gagctccttgagcacctgggtggcatcagtgcatccgaacataggcagcttccacatggt 95268 Query: 359 ccagtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaac 418 |||||| | ||| || |||||||| || || |||| || ||||||| ||||||| || || Sbjct: 95269 ccagtacctgccatcatagtacccaggagacctgtggttctcacggtagacgaacccgac 95328 Query: 419 cttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcag 478 ||| || ||||||||||| |||||||| ||||| |||| |||||| || | |||||||| Sbjct: 95329 cttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgatctgcttcaa 95388 Query: 479 gagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccct 538 || || |||| ||||| ||||||| ||| ||||||||||| |||||||||||||| | Sbjct: 95389 ga-ggtcctcgaccgtgagcggtggcaggtacgacagggtctcaaacttcttgatgcctt 95447 Query: 539 caatcggccacacctgc 555 ||||||||||||||||| Sbjct: 95448 caatcggccacacctgc 95464 Score = 190 bits (96), Expect = 4e-45 Identities = 304/372 (81%), Gaps = 1/372 (0%) Strand = Plus / Plus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||||||||||||| | | ||||||||||||| |||||||||| | | | Sbjct: 51946 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 52005 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 ||||| ||||| ||||| || ||| |||| |||||||| |||| || ||||||||| | Sbjct: 52006 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 52065 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || |||||||| || ||||| |||||||| || ||||| ||||| |||||||| |||||| Sbjct: 52066 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 52125 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||||| ||||| ||||| || |||| | ||||||| ||||||| || |||||| Sbjct: 52126 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 52185 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 |||||||| | ||| ||||||||||| || |||| |||||| || | |||||||| | | Sbjct: 52186 ctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgcttca-aaag 52244 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| || | || |||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 52245 gtcctccactgtcaatggcggcaagtacgacagagtctcgaacttcttaatgccctcaat 52304 Query: 543 cggccacacctg 554 |||||||||||| Sbjct: 52305 cggccacacctg 52316 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 550 acctgcatgcatctgatccttccgccattgctgacg 585 |||||||||||||||||||||||||||||||||||| Sbjct: 52415 acctgcatgcatctgatccttccgccattgctgacg 52450 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggccggcgctg 603 |||||||| || ||||||||||| || ||||||||||||| ||||||||||||| Sbjct: 95576 acctgcatacagctgatccttccaccgttgctgacgctgccgaggccggcgctg 95629 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 550 acctgcatgcatctgatccttccgccattgctgacg 585 ||||||||||| ||||||||||||||||||||||| Sbjct: 110233 acctgcatgcacttgatccttccgccattgctgacg 110268 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 517 gtctcgaacttcttgatgccctcaatcggccacacct 553 |||||||||||||| |||| |||| ||||||||||| Sbjct: 105478 gtctcgaacttcttcttgccatcaaccggccacacct 105514
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 278 bits (140), Expect = 2e-71 Identities = 189/204 (92%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 392 gttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggcacccacttgga 451 ||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 271 gttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggcacccacttgga 212 Query: 452 gcggatcaggtagtcaacctgcttcaggagggccctccgtggtgaggggtggcaagtaag 511 ||||||||||||||| |||||||| ||||||||| |||||| |||| ||||||| ||||| Sbjct: 211 gcggatcaggtagtcgacctgcttgaggagggcc-tccgtgctgagcggtggcaggtaag 153 Query: 512 acagggtctcgaacttcttgatgccctcaatcggccacacctgcatgcatctgatccttc 571 |||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||| Sbjct: 152 acagggtctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatccttc 93 Query: 572 cgccattgctgacgctgctgaggc 595 | || ||||||||||||| ||||| Sbjct: 92 caccgttgctgacgctgccgaggc 69 Score = 190 bits (96), Expect = 4e-45 Identities = 126/136 (92%) Strand = Plus / Minus Query: 169 tttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcact 228 |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 494 tttaggccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcact 435 Query: 229 gcacctgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttt 288 |||||||||||| ||||||||| |||||||| ||||| || ||||||||||||||||| | Sbjct: 434 gcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttct 375 Query: 289 tgacctcctcgacctc 304 |||||||||| ||||| Sbjct: 374 tgacctcctccacctc 359
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 278 bits (140), Expect = 2e-71 Identities = 294/344 (85%), Gaps = 1/344 (0%) Strand = Plus / Minus Query: 242 gttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgac 301 |||||||||||||||||||||||| |||| |||||||| |||| ||| | || |||| Sbjct: 508 gttgtcgaagccgatgatacggacaaaggcatcagggtaggccttcttggcatcttcgag 449 Query: 302 ctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtcca 361 || ||||||||||| ||||| |||||||| |||||||| |||||||||||||| ||||| Sbjct: 448 ttccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtcca 389 Query: 362 gtatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaacctt 421 || | ||| |||||||| ||||| || |||| || ||||||| ||||||| |||||||| Sbjct: 388 atacctgccatcgtagtatccgggagacctgtggttctcacggtagacgaacccaacctt 329 Query: 422 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggag 481 |||||||||||| || |||||||||||||| || | |||||| || | |||||||| | Sbjct: 328 gctgaactcgagacaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaa 270 Query: 482 ggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaa 541 | ||||| |||||| ||||||| ||| || |||||||||||||||||||||||||||| Sbjct: 269 gatcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaa 210 Query: 542 tcggccacacctgcatgcatctgatccttccgccattgctgacg 585 | ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 209 ttggccacacctgcatgcacttgatccttccgccattgctgacg 166
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 252 bits (127), Expect = 1e-63 Identities = 335/403 (83%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||||||||||||| | | ||||||||||||| |||||||||| | | | Sbjct: 579 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 520 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 ||||| ||||| ||||| || ||| |||| |||||||| |||| || ||||||||| | Sbjct: 519 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 460 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || |||||||| || ||||| |||||||| || ||||| ||||| |||||||| |||||| Sbjct: 459 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 400 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||||| ||||| ||||| || |||| | ||||||| ||||||| || |||||| Sbjct: 399 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 340 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 |||||||| | ||| ||||||||||| || |||| |||||| || | |||||||| | | Sbjct: 339 ctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgcttca-aaag 281 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| || | || |||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 280 gtcctccactgtcaatggcggcaagtacgacagagtctcgaacttcttaatgccctcaat 221 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 cggccacacctgcatgcatctgatccttccgccattgctgacg 178
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 252 bits (127), Expect = 1e-63 Identities = 335/403 (83%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 183 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcagg 242 ||||||||||||||||||||| | | ||||||||||||| |||||||||| | | | Sbjct: 581 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 522 Query: 243 ttgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacc 302 ||||| ||||| ||||| || ||| |||| |||||||| |||| || ||||||||| | Sbjct: 521 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 462 Query: 303 tcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccag 362 || |||||||| || ||||| |||||||| || ||||| ||||| |||||||| |||||| Sbjct: 461 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 402 Query: 363 tatcggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttg 422 || | ||||| ||||| ||||| || |||| | ||||||| ||||||| || |||||| Sbjct: 401 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 342 Query: 423 ctgaactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggagg 482 |||||||| | ||| ||||||||||| || |||| |||||| || | |||||||| | | Sbjct: 341 ctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgcttca-aaag 283 Query: 483 gccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaat 542 | ||||| || | || |||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 282 gtcctccactgtcaatggcggcaagtacgacagagtctcgaacttcttaatgccctcaat 223 Query: 543 cggccacacctgcatgcatctgatccttccgccattgctgacg 585 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 cggccacacctgcatgcatctgatccttccgccattgctgacg 180
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 161 bits (81), Expect = 3e-36 Identities = 322/401 (80%), Gaps = 1/401 (0%) Strand = Plus / Minus Query: 195 cccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccg 254 ||||| ||| || ||||||||||||||||||||||| ||| | ||||||||||||| Sbjct: 568 cccgggggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccg 509 Query: 255 atgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgagcacc 314 |||| ||| | ||||||| ||||| || || |||||| | ||| ||| |||| Sbjct: 508 atgacgcggtggaaggcgtccgggtaggatttgatggcctcctgcagctccttgtacacc 449 Query: 315 tgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcg 374 || ||||||||| |||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 448 tgggtggcgtcgttgcagccgaacatgggcagcttccacatggtccagtagcggccgtcg 389 Query: 375 tagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctgaactcgagg 434 ||||| | |||||| || || ||| ||| | |||||||| |||||||||||||||||| Sbjct: 388 tagtagcacggggaggtggagttctcgcggtacacgaagccgaccttgctgaactcgagg 329 Query: 435 cagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggccctccgtggt 494 ||||| | ||| | ||| | ||||||||| ||||||||||| | || | ||||| | Sbjct: 328 cagggtatccagccgttgcgcagcaggtagtccacctgcttcagca-ggtcgtccgtcga 270 Query: 495 gaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcggccacacctg 554 || || |||| ||| ||||| ||||||||||||||| |||| | |||||||||||| Sbjct: 269 cagcggcggcaggtacgacagcgtctcgaacttcttgttgccgtaggccggccacacctg 210 Query: 555 catgcatctgatccttccgccattgctgacgctgctgaggc 595 |||||| | |||||||||||| ||||||||| ||| ||||| Sbjct: 209 catgcaccggatccttccgccgttgctgacgttgccgaggc 169
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 161 bits (81), Expect = 3e-36 Identities = 322/401 (80%), Gaps = 1/401 (0%) Strand = Plus / Minus Query: 195 cccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccg 254 ||||| ||| || ||||||||||||||||||||||| ||| | ||||||||||||| Sbjct: 568 cccgggggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccg 509 Query: 255 atgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgagcacc 314 |||| ||| | ||||||| ||||| || || |||||| | ||| ||| |||| Sbjct: 508 atgacgcggtggaaggcgtccgggtaggatttgatggcctcctgcagctccttgtacacc 449 Query: 315 tgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcg 374 || ||||||||| |||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 448 tgggtggcgtcgttgcagccgaacatgggcagcttccacatggtccagtagcggccgtcg 389 Query: 375 tagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctgaactcgagg 434 ||||| | |||||| || || ||| ||| | |||||||| |||||||||||||||||| Sbjct: 388 tagtagcacggggaggtggagttctcgcggtacacgaagccgaccttgctgaactcgagg 329 Query: 435 cagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggccctccgtggt 494 ||||| | ||| | ||| | ||||||||| ||||||||||| | || | ||||| | Sbjct: 328 cagggtatccagccgttgcgcagcaggtagtccacctgcttcagca-ggtcgtccgtcga 270 Query: 495 gaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcggccacacctg 554 || || |||| ||| ||||| ||||||||||||||| |||| | |||||||||||| Sbjct: 269 cagcggcggcaggtacgacagcgtctcgaacttcttgttgccgtaggccggccacacctg 210 Query: 555 catgcatctgatccttccgccattgctgacgctgctgaggc 595 |||||| | |||||||||||| ||||||||| ||| ||||| Sbjct: 209 catgcaccggatccttccgccgttgctgacgttgccgaggc 169
>gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 195 Score = 155 bits (78), Expect = 2e-34 Identities = 144/166 (86%) Strand = Plus / Minus Query: 320 ggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||||| ||||| |||||||| ||||||||||||||||||||||| | |||||||||||| Sbjct: 195 ggcgtcagtgcagccgaacatgggcagcttccacattgtccagtacctgccgtcgtagta 136 Query: 380 cccgggggagctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcaggg 439 ||||| | |||| | ||||||||||| ||||||||||||||||||||| | |||||| Sbjct: 135 tccgggagtgctgccgaactcacggaagatgaagccaaccttgctgaactccaagcaggg 76 Query: 440 cacccacttggagcggatcaggtagtcaacctgcttcaggagggcc 485 ||||| ||||||||||||| |||| | |||||||||||||||| Sbjct: 75 aacccatttggagcggatcaaaaagtcgatctgcttcaggagggcc 30
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 145 bits (73), Expect = 2e-31 Identities = 320/401 (79%), Gaps = 1/401 (0%) Strand = Plus / Minus Query: 195 cccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccg 254 ||||| ||| || ||||||||||||||||||||||| ||| | ||||||||||||| Sbjct: 688 cccgggggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccg 629 Query: 255 atgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgagcacc 314 |||| ||| | ||||||| ||||| || || |||||| | ||| ||| |||| Sbjct: 628 atgacgcggtggaaggcgtccgggtaggatttgatggcctcctgcagctccttgtacacc 569 Query: 315 tgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcg 374 || ||||||||| |||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 568 tgggtggcgtcgttgcagccgaacatgggcagcttccacatggtccagtagcggccgtcg 509 Query: 375 tagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctgaactcgagg 434 ||||| | |||||| || || ||| ||| | ||||| || | |||||||||||||||| Sbjct: 508 tagtagcacggggaggtggagttctcgcggtacacgaacccgagcttgctgaactcgagg 449 Query: 435 cagggcacccacttggagcggatcaggtagtcaacctgcttcaggagggccctccgtggt 494 ||||| | ||| | ||| | ||||||||| ||||||||||| | || | ||||| | Sbjct: 448 cagggtatccagccgttgcgcagcaggtagtccacctgcttcagca-ggtcgtccgtcga 390 Query: 495 gaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcggccacacctg 554 || || |||| ||| ||||| ||||||||||||||| |||| | |||||||||||| Sbjct: 389 cagcggcggcaggtacgacagcgtctcgaacttcttgttgccgtaggccggccacacctg 330 Query: 555 catgcatctgatccttccgccattgctgacgctgctgaggc 595 |||||| | |||||||||||| ||||||||| ||| ||||| Sbjct: 329 catgcaccggatccttccgccgttgctgacgttgccgaggc 289
>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 2328 Score = 139 bits (70), Expect = 1e-29 Identities = 136/158 (86%) Strand = Plus / Minus Query: 321 gcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtac 380 ||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 1640 gcgtcggtgcagccgaacatgggcagcttccacatggtccagtaccggccgtcgtagtag 1581 Query: 381 ccgggggagctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggc 440 | |||||| || || ||| ||| | |||||||| ||||||||||||||||||||||| Sbjct: 1580 cacggggaggtggagttctcgcggtacacgaagccttccttgctgaactcgaggcagggc 1521 Query: 441 acccacttggagcggatcaggtagtcaacctgcttcag 478 ||||| ||| ||| | ||||||||| ||||||||||| Sbjct: 1520 acccagttgttgcgcagcaggtagtccacctgcttcag 1483 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgac 584 ||||||||||| | |||||||||||| |||||||| Sbjct: 1317 acctgcatgcaccggatccttccgccgttgctgac 1283
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS1) mRNA, complete cds Length = 853 Score = 133 bits (67), Expect = 7e-28 Identities = 148/175 (84%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| |||| |||||||||||| || |||||||||||||||||| |||| | Sbjct: 591 aggcgatgaaactgatgcactgcacctggcggttgttgtcgaagccgatgatgcggatga 532 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||||| ||||||||||| ||| |||||| ||||| || |||||| ||||||| Sbjct: 531 aggcgtgggggtactccttcttgcactcctccacctccttcgccacctgcacagcgtcgg 472 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||||||| |||||||||||||| |||||||| || |||||||||||||| Sbjct: 471 tgcacccgaacatgggcagcttccacatggtccagtaccgcccgtcgtagtaccc 417 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 511 gacagggtctcgaacttcttgatgccctcaatcggccacacctgcatgca 560 ||||||||||| |||||||| | |||||| ||||||||||||| |||||| Sbjct: 289 gacagggtctcaaacttcttcacgccctcgatcggccacaccttcatgca 240
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 127 bits (64), Expect = 5e-26 Identities = 281/352 (79%), Gaps = 1/352 (0%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 ||||||||||||||||||||||| ||| | | ||||||||||||||||| ||| | Sbjct: 803 aggcgatgaagctgacgcactgcgtctgcctgacgttgtcgaagccgatgacgcggtgga 744 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 ||||||| |||||| | || |||||| | ||| ||| |||||| |||||||||| Sbjct: 743 aggcgtccgggtacgcggcgatggcctcctgcagctccttgtacacctgcgtggcgtcgg 684 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggggg 387 |||| |||||||| |||||||||||||| |||||||| |||||||||||||| | |||| Sbjct: 683 tgcagccgaacatgggcagcttccacatggtccagtagcggccgtcgtagtagcacgggg 624 Query: 388 agctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggcacccact 447 || || || ||| ||| | ||||| || | ||||||||||||||||||||| | ||| Sbjct: 623 aggtggagttctcgcggtacacgaacccgagcttgctgaactcgaggcagggtatccagc 564 Query: 448 tggagcggatcaggtagtcaacctgcttcaggagggccctccgtggtgaggggtggcaag 507 | ||| | ||||||||| ||||||||||| | || | ||||| | || || |||| | Sbjct: 563 cgttgcgcagcaggtagtccacctgcttcagca-ggtcgtccgtcgacagcggcggcagg 505 Query: 508 taagacagggtctcgaacttcttgatgccctcaatcggccacacctgcatgc 559 || ||||| ||||||||||||||| |||| | ||||||||||||||||| Sbjct: 504 tacgacagcgtctcgaacttcttgttgccgtaggccggccacacctgcatgc 453 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| | |||||||||||| ||||||||| ||| ||||| Sbjct: 344 acctgcatgcaccggatccttccgccgttgctgacgttgccgaggc 299
>gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 968 Score = 127 bits (64), Expect = 5e-26 Identities = 178/216 (82%) Strand = Plus / Minus Query: 215 gaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgtaggcgtc 274 |||||||| ||||||||| || ||| |||||||||||||||||| ||| | || ||| Sbjct: 550 gaagctgatgcactgcacttggcgcgtgttgtcgaagccgatgatccggttgaagtagtc 491 Query: 275 agggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcggtgcaccc 334 |||||| |||| || ||| || ||||| ||||||||||| | || |||||||||||| Sbjct: 490 ggggtacgccttactgcactcgtccacctccttgagcacctgggaggagtcggtgcaccc 431 Query: 335 gaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggggagctgtt 394 |||||| |||| ||||||||| |||||||| || |||||||||||||| ||||| ||| Sbjct: 430 gaacatgggcaacttccacatggtccagtagcgcccgtcgtagtaccccggggaattgtg 371 Query: 395 gtgctcacggaagacgaagccaaccttgctgaactc 430 || ||||||| | ||||| || ||||||| |||||| Sbjct: 370 gtactcacggtacacgaaacccaccttgcagaactc 335 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 486 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 545 |||| ||||||| ||||||| ||| |||||||||||||||||||| ||||||| ||| Sbjct: 280 ctccctggtgagtggtggcaggtaggacagggtctcgaacttcttcttgccctccggcgg 221 Query: 546 ccacacctgcatgca 560 ||||||||||||||| Sbjct: 220 ccacacctgcatgca 206
>emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 123 bits (62), Expect = 7e-25 Identities = 149/178 (83%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 602 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 543 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 || || ||||| |||| ||| ||||||| ||||| || |||||| ||||||||| Sbjct: 542 agtactcggggtaggccttcttggcctcctccacctcggcgatcacctggctggcgtcgg 483 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggg 385 |||| |||||||| |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 482 tgcagccgaacatgggcagcttccacatcgtccagtaccgcccgtcgtagtacccggg 425 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 514 agggtctcgaacttcttgatgccctcaatcggccacacctgcatgcatctgatccttccg 573 ||||||||||||||||| | |||||| |||||||||||||||||| || | ||| ||| Sbjct: 215 agggtctcgaacttcttcaggccctccggcggccacacctgcatgcagctaaccctgccg 156 Query: 574 ccattgctg 582 || |||||| Sbjct: 155 ccgttgctg 147
>emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 123 bits (62), Expect = 7e-25 Identities = 149/178 (83%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 600 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 541 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 || || ||||| |||| ||| ||||||| ||||| || |||||| ||||||||| Sbjct: 540 agtactcggggtaggccttcttggcctcctccacctcggcgatcacctggctggcgtcgg 481 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggg 385 |||| |||||||| |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 480 tgcagccgaacatgggcagcttccacatcgtccagtaccgcccgtcgtagtacccggg 423 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 514 agggtctcgaacttcttgatgccctcaatcggccacacctgcatgca 560 ||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 215 agggtctcgaacttcttcaggccctccggcggccacacctgcatgca 169
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 121 bits (61), Expect = 3e-24 Identities = 199/245 (81%) Strand = Plus / Minus Query: 195 cccggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccg 254 ||||| ||| || ||||||||||||||||||||||| ||| | ||||||||||||| Sbjct: 1153 cccgggggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccg 1094 Query: 255 atgatacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgagcacc 314 |||| ||| | ||||||| ||||| || || |||||| | ||| ||| |||| Sbjct: 1093 atgacgcggtggaaggcgtccgggtaggatttgatggcctcctgcagctccttgtacacc 1034 Query: 315 tgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcg 374 || ||||||||| |||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 1033 tgggtggcgtcgttgcagccgaacatgggcagcttccacatggtccagtagcggccgtcg 974 Query: 375 tagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctgaactcgagg 434 ||||| | |||||| || || ||| ||| | |||||||| |||||||||||||||||| Sbjct: 973 tagtagcacggggaggtggagttctcgcggtacacgaagccgaccttgctgaactcgagg 914 Query: 435 caggg 439 ||||| Sbjct: 913 caggg 909 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacgctgctgaggc 595 ||||||||||| | |||||||||||| ||||||||| ||| ||||| Sbjct: 639 acctgcatgcaccggatccttccgccgttgctgacgttgccgaggc 594
>emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit (cDNA clone pLg ssu1) Length = 776 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 523 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 464 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 | || ||||| |||| ||| ||||||| ||||| || |||||| ||||||||| Sbjct: 463 aatactcggggtaggccttcttggcctcctccacctcggcgatcacctggctggcgtcgg 404 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggggg 387 |||| |||||||| |||||||||||||| |||||||| | ||||||||||||||||| | Sbjct: 403 tgcagccgaacatgggcagcttccacatcgtccagtacctcccgtcgtagtacccgggcg 344 Query: 388 agctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggcaccca 445 | ||||| ||||||| | ||||| || ||||| |||||||| |||||| ||||| Sbjct: 343 acgcgttgttctcacggtacacgaacccctccttggagaactcgatgcagggaaccca 286 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 505 aagtaagacagggtctcgaacttcttgatgccctcaatcggccacacctgcatgca 560 ||||| || ||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 227 aagtaggagagggtctcgaacttcttcaggccctccggcggccacacctgcatgca 172
>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 858 Score = 115 bits (58), Expect = 2e-22 Identities = 148/178 (83%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 597 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 538 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 | || ||||| |||| ||| ||||||| ||||| || |||||| ||||||||| Sbjct: 537 aatactcggggtaggccttcttggcctcctccacctcggcgatcacctggctggcgtcgg 478 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggg 385 |||| |||||||| |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 477 tgcagccgaacatgggcagcttccacatcgtccagtaccgcccgtcgtagtacccggg 420 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 514 agggtctcgaacttcttgatgccctcaatcggccacacctgcatgcatctgatccttccg 573 ||||||||||||||||||| |||||| |||||||||||||||||| || | ||| ||| Sbjct: 215 agggtctcgaacttcttgaggccctccggcggccacacctgcatgcagctaaccctgccg 156 Query: 574 ccattgctg 582 || |||||| Sbjct: 155 ccgttgctg 147
>emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 764 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 508 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 449 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 | || ||||| |||| ||| ||||||| ||||| || |||||| ||||||||| Sbjct: 448 aatactcggggtaggccttcttggcctcctccacctcggcgatcacctggctggcgtcgg 389 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggggg 387 |||| |||||||| |||||||||||||| |||||||| | ||||||||||||||||| | Sbjct: 388 tgcagccgaacatgggcagcttccacatcgtccagtacctcccgtcgtagtacccgggcg 329 Query: 388 agctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggcaccca 445 | ||||| ||||||| | ||||| || ||||| |||||||| |||||| ||||| Sbjct: 328 acgcgttgttctcacggtacacgaacccctccttggagaactcgatgcagggaaccca 271 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 514 agggtctcgaacttcttgatgccctcaatcggccacacctgcatgca 560 ||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 203 agggtctcgaacttcttcaggccctccggcggccacacctgcatgca 157
>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase small subunit mRNA, clone pTS406, 3' end Length = 317 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 169 tttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcact 228 |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 68 tttaggccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcact 9 Query: 229 gcacctga 236 |||||||| Sbjct: 8 gcacctga 1
>gb|L10212.1|CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1) rubisco small subunit gene, complete cds Length = 3552 Score = 111 bits (56), Expect = 3e-21 Identities = 143/172 (83%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| |||| ||||| || ||||||| ||||||||| ||||||||||||| | Sbjct: 2520 aggcgatgaaactgatacactgtacttgacgcacgttgtcgaatccgatgatacggatga 2461 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| |||||||| |||| ||| ||||||||| |||| || |||||| | | ||| | Sbjct: 2460 aggcctcagggtaagccttcttggcctcctcgagctcagcgaccacctgggatgggtcag 2401 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||| |||||||| |||| |||||||||||||||||| || || |||||||| Sbjct: 2400 tgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 2349
>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 800 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 621 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 562 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 | || ||||| |||| ||| ||||||| ||||| || |||||| ||||||||| Sbjct: 561 aatactcggggtaggccttcttggcctcctccacctcggcgatcacctggctggcgtcgg 502 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||| |||||||| |||||||||||||| |||||||| || |||||||||||||| Sbjct: 501 tgcagccgaacatgggcagcttccacatcgtccagtaccgcccgtcgtagtaccc 447 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 514 agggtctcgaacttcttgatgccctcaatcggccacacctgcatgcatctgatccttccg 573 ||||||||||||||||||| |||||| |||||||||||||||||| || | ||| ||| Sbjct: 215 agggtctcgaacttcttgaggccctccggcggccacacctgcatgcagctaaccctgccg 156 Query: 574 ccattgctg 582 || |||||| Sbjct: 155 ccgttgctg 147
>emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate carboxylase small subunit percursor (rbcs gene) Length = 686 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 ||||||||||||||||||||||||| ||||| | ||||||||| ||||| || |||||| Sbjct: 574 aggcgatgaagctgacgcactgcacttgacggacgttgtcgaatccgataatgcggacga 515 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 | || | ||||| |||| || ||||||||| ||| || ||||| |||||||| | Sbjct: 514 aagcatgtgggtaagccttcttagcctcctcgagctcggcgacaacctgggtggcgtcag 455 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||||||| |||||||||||||| |||||||| | ||||| |||||||| Sbjct: 454 tgcacccgaacatgggcagcttccacatggtccagtaccttccgtcatagtaccc 400
>emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 936 Score = 107 bits (54), Expect = 4e-20 Identities = 147/178 (82%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 578 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 519 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 || || ||||| |||| ||| ||||||| ||||| || |||||| ||||||||| Sbjct: 518 agtactcggggtaggccttcttggcctcctccacctcggcgatcacctggctggcgtcgg 459 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggg 385 |||| |||||||| |||| ||||||||| |||||||| | ||||||||||||||||| Sbjct: 458 tgcagccgaacatgggcaacttccacatcgtccagtacctcccgtcgtagtacccggg 401 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 514 agggtctcgaacttcttgatgccctcaatcggccacacctgcatgca 560 |||||||| |||||||||| |||||| |||||||||||||||||| Sbjct: 215 agggtctcaaacttcttgaggccctccggcggccacacctgcatgca 169
>gb|M38316.1|CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-2) mRNA, complete cds Length = 680 Score = 105 bits (53), Expect = 2e-19 Identities = 131/157 (83%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| |||| |||||| || ||||||| ||||||||| ||||||||||||| | Sbjct: 551 aggcgatgaaactgatgcactgtacttgacgcacgttgtcgaatccgatgatacggatga 492 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| |||||||| |||| ||| ||||||||| |||| | |||||| | | ||| | Sbjct: 491 aggcctcagggtaagccttcttggcctcctcgagctcagcaaccacctgggatgggtcag 432 Query: 328 tgcacccgaacataggcagcttccacattgtccagta 364 |||| |||||||| |||| |||||||||||||||||| Sbjct: 431 tgcaaccgaacatgggcaacttccacattgtccagta 395 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 gtaagacagggtctcgaacttctt 530 ||||||||| |||||||||||||| Sbjct: 250 gtaagacagagtctcgaacttctt 227
>emb|AJ843972.1| Plantago major mRNA for Rubisco SSU (rbcs1 gene) Length = 806 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 319 tggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagt 378 ||||||| ||||| |||||||| |||| |||||||||||||||||| || ||||| |||| Sbjct: 446 tggcgtcagtgcaaccgaacatgggcaacttccacattgtccagtagcgtccgtcatagt 387 Query: 379 acccgggggagctgttgtgctcacggaagacgaa 412 | |||||||| ||||||| ||||||| ||||||| Sbjct: 386 atccgggggacctgttgttctcacggtagacgaa 353
>gb|L10214.1|CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2) rubisco small subunit gene, complete cds Length = 2671 Score = 97.6 bits (49), Expect = 4e-17 Identities = 130/157 (82%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| |||| |||||| || ||||||| ||||||||| |||||||||||| | Sbjct: 2033 aggcgatgaaactgatgcactgtacttgacgcacgttgtcgaatccgatgatacgggtga 1974 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| |||||||| |||| ||| ||||||||| |||| | |||||| | | ||| | Sbjct: 1973 aggcctcagggtaagccttcttggcctcctcgagctcagcaaccacctgggatgggtcag 1914 Query: 328 tgcacccgaacataggcagcttccacattgtccagta 364 |||| |||||||| |||| |||||||||||||||||| Sbjct: 1913 tgcaaccgaacatgggcaacttccacattgtccagta 1877 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 gtaagacagggtctcgaacttctt 530 ||||||||| |||||||||||||| Sbjct: 1522 gtaagacagagtctcgaacttctt 1499
>gb|M38318.1|CIPRBCS4 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-4) mRNA, complete cds Length = 747 Score = 95.6 bits (48), Expect = 2e-16 Identities = 141/172 (81%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| ||||| ||||| || ||||||| ||||||||| || |||||||||| | Sbjct: 544 aggcgatgaaactgacacactggacttgacgcacgttgtcgaatcctatgatacggatga 485 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| |||||||| |||| ||| ||||||||| |||| | ||||| | | ||| | Sbjct: 484 aggcctcagggtaagccttcttggcctcctcgagctcagcaacaacctgggatgggtcag 425 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||| |||||||| |||| |||||||||||||||||| || || |||||||| Sbjct: 424 tgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 373
>gb|L10215.1|CIP345RSS Mesembryanthemum crystallinum (clones: rbcs-3 and -4) rubisco small subunit genes, complete cds, (clone: rbcs-5) rubisco small submnit gene, partial cds Length = 8682 Score = 95.6 bits (48), Expect = 2e-16 Identities = 141/172 (81%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| ||||| ||||| || ||||||| ||||||||| || |||||||||| | Sbjct: 7682 aggcgatgaaactgacacactggacttgacgcacgttgtcgaatcctatgatacggatga 7623 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| |||||||| |||| ||| ||||||||| |||| | ||||| | | ||| | Sbjct: 7622 aggcctcagggtaagccttcttggcctcctcgagctcagcaacaacctgggatgggtcag 7563 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||| |||||||| |||| |||||||||||||||||| || || |||||||| Sbjct: 7562 tgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 7511 Score = 95.6 bits (48), Expect = 2e-16 Identities = 141/172 (81%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| ||||| ||||| || ||||||| ||||||||| || |||||||||| | Sbjct: 3700 aggcgatgaaactgacacactggacttgacgcacgttgtcgaatcctatgatacggatga 3641 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| |||||||| |||| ||| ||||||||| |||| | ||||| | | ||| | Sbjct: 3640 aggcctcagggtaagccttcttggcctcctcgagctcagcaacaacctgggatgggtcag 3581 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||| |||||||| |||| |||||||||||||||||| || || |||||||| Sbjct: 3580 tgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 3529 Score = 95.6 bits (48), Expect = 2e-16 Identities = 141/172 (81%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| |||| ||||| || ||||||| ||||||||| ||||||||||||| | Sbjct: 1334 aggcgatgaaactgatacactggacttgacgcacgttgtcgaatccgatgatacggatga 1275 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| |||||||| |||| ||| ||||||||| |||| | ||||| | | ||| | Sbjct: 1274 aggcctcagggtaagccttcttggcctcctcgagctcagcaacaacctgggatgggtcag 1215 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||| |||||||| |||| |||||||||||||||||| || ||||| ||||| Sbjct: 1214 tgcaaccgaacatgggcaacttccacattgtccagtaacgtccgtcatagta 1163 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 gtaagacagggtctcgaacttctt 530 ||||||||| |||||||||||||| Sbjct: 918 gtaagacagagtctcgaacttctt 895
>gb|AY023648.1| Oryza sativa microsatellite MRG5973 containing (TTC)X13, closest to marker S10704, genomic sequence Length = 239 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 492 ggtgaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcggccacac 551 |||||| ||||||| ||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 234 ggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaatcggccacac 175 Query: 552 ct 553 || Sbjct: 174 ct 173 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 550 acctgcatgcatctgatccttccgccattgctgacg 585 ||||||||||| |||||||| ||||||||||||||| Sbjct: 73 acctgcatgcacctgatcctgccgccattgctgacg 38
>gb|AY163904.1| Chrysanthemum x morifolium ribulose-1,5-bisphosphate carboxylase small subunit gene, complete cds; nuclear gene for chloroplast product Length = 2662 Score = 89.7 bits (45), Expect = 1e-14 Identities = 144/177 (81%) Strand = Plus / Minus Query: 228 tgcacctgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactccttt 287 ||||| ||||| | ||||||||| |||||||||||||| ||| | ||||||||||| Sbjct: 1678 tgcacttgacgaacgttgtcgaatccgatgatacggacccaggactgtgggtactccttc 1619 Query: 288 ttgacctcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagc 347 ||| ||| | || || || | ||| || | |||||| ||||||||||||| |||| | Sbjct: 1618 ttgcactcgttgagttccttcaacacttgagaggcgtcattgcacccgaacatgggcaac 1559 Query: 348 ttccacattgtccagtatcggccgtcgtagtacccgggggagctgttgtgctcacgg 404 ||||||||||||||||||| ||| |||||||| |||||||||| |||| ||||||| Sbjct: 1558 ttccacattgtccagtatctgccatcgtagtatccgggggagcgattgttctcacgg 1502
>gb|L76557.1|SPIRBCS Spinacia oleracea chloroplast ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 756 Score = 89.7 bits (45), Expect = 1e-14 Identities = 132/161 (81%) Strand = Plus / Minus Query: 244 tgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacct 303 ||||||| || |||||||||| | |||||| ||||||||||| ||| || |||| || Sbjct: 518 tgtcgaatccaatgatacggatgaaggcgttggggtactccttcttgcattcttcgagct 459 Query: 304 cattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagt 363 |||| | ||||| | | ||| |||||||||||||| |||| ||||||||||||||||| Sbjct: 458 cattcaaaacctgggccgggtcagtgcacccgaacatgggcaacttccacattgtccagt 399 Query: 364 atcggccgtcgtagtacccgggggagctgttgtgctcacgg 404 | || ||||| |||||||| ||||| ||| |||||||||| Sbjct: 398 aacgaccgtcatagtaccctggggaattgtggtgctcacgg 358
>emb|X97600.1|SORBCS2 S.oleracea mRNA for ribulose-1,5-bisphosphate carboxylase Length = 751 Score = 89.7 bits (45), Expect = 1e-14 Identities = 132/161 (81%) Strand = Plus / Minus Query: 244 tgtcgaagccgatgatacggacgtaggcgtcagggtactcctttttgacctcctcgacct 303 ||||||| || |||||||||| | |||||| ||||||||||| ||| || |||| || Sbjct: 516 tgtcgaatccaatgatacggatgaaggcgttggggtactccttcttgcattcttcgagct 457 Query: 304 cattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagt 363 |||| | ||||| | | ||| |||||||||||||| |||| ||||||||||||||||| Sbjct: 456 cattcaaaacctgggccgggtcagtgcacccgaacatgggcaacttccacattgtccagt 397 Query: 364 atcggccgtcgtagtacccgggggagctgttgtgctcacgg 404 | || ||||| |||||||| ||||| ||| |||||||||| Sbjct: 396 aacgaccgtcatagtaccctggggaattgtggtgctcacgg 356
>gb|J03613.1|POTRBCS Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds Length = 546 Score = 89.7 bits (45), Expect = 1e-14 Identities = 159/197 (80%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||| ||||| |||| ||||||||| ||||| | ||||||||| ||||| ||||||| Sbjct: 526 aggcaatgaaactgatgcactgcacttgacgaacgttgtcgaatccgataatacggatcc 467 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| | |||||| | || ||| |||| | |||||| | |||||| || |||| | Sbjct: 466 aggcctgtgggtacgcattcttggcctcttgaacctcagccaacacctgggttccgtcag 407 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggggg 387 ||||||| |||||||||| ||||||||| |||||||||| || |||||||| || || | Sbjct: 406 tgcacccaaacataggcaacttccacatggtccagtatctaccatcgtagtatcctggtg 347 Query: 388 agctgttgtgctcacgg 404 ||||||||||||||||| Sbjct: 346 agctgttgtgctcacgg 330 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 ggccacacctgcatgcatct 563 |||||||||||||||||||| Sbjct: 188 ggccacacctgcatgcatct 169
>gb|BC038257.1| Mus musculus cDNA clone MGC:47002 IMAGE:5148367, complete cds Length = 763 Score = 87.7 bits (44), Expect = 4e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 273 tcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcggtgcac 332 |||||||| |||| ||||||||||| |||||||| | |||||| | | ||| |||||| Sbjct: 510 tcagggtaagccttcttgacctcctcaacctcattcaccacctgagctgggtcagtgcac 451 Query: 333 ccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggggagctg 392 ||||||||||||| ||||||||| |||||||| || || || ||||| || || || || Sbjct: 450 ccgaacataggcaacttccacatagtccagtagcgaccatcatagtatcctggcgatttg 391 Query: 393 ttgtgctcacgg 404 |||||||||||| Sbjct: 390 ttgtgctcacgg 379 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 490 gtggtgaggggtggcaagtaagacagggtctcgaacttctt 530 |||||||| ||||| | |||||| ||||||||||||||||| Sbjct: 291 gtggtgagaggtggaaggtaagagagggtctcgaacttctt 251
>gb|M38317.1|CIPRBCS3 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-3) mRNA, complete cds Length = 765 Score = 87.7 bits (44), Expect = 4e-14 Identities = 140/172 (81%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| |||| ||||| || ||||||| ||||||||| ||||||||||||| | Sbjct: 542 aggcgatgaaactgatacactggacttgacgcacgttgtcgaatccgatgatacggatga 483 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| |||||||| |||| || ||||||||| |||| | ||||| | | ||| | Sbjct: 482 aggcctcagggtaagccttctttgcctcctcgagctcagcaacaacctgggatgggtcag 423 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||| |||||||| |||| |||||||||||||||||| || ||||| ||||| Sbjct: 422 tgcaaccgaacatgggcaacttccacattgtccagtaacgtccgtcatagta 371 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 gtaagacagggtctcgaacttctt 530 ||||||||| |||||||||||||| Sbjct: 241 gtaagacagagtctcgaacttctt 218
>gb|M31640.1|CIPRBC Ice plant ribulose-1-5-bisphosphate carboxylase (rbc5) gene, complete cds Length = 776 Score = 87.7 bits (44), Expect = 4e-14 Identities = 140/172 (81%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| |||| ||||| || ||||||| ||||||||| ||||||||||||| | Sbjct: 559 aggcgatgaaactgatacactgtacttgacgcacgttgtcgaatccgatgatacggatga 500 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| |||||||| |||| ||| |||| || |||| || |||||| | | ||| | Sbjct: 499 aggcctcagggtaagccttcttggcctctcggagctcagcgaccacctgggatgggtcag 440 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||| |||||||| |||| |||||||||||||||||| || || |||||||| Sbjct: 439 tgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 388
>emb|AJ439989.1|OSA439989 Oryza sativa partial mRNA for ribulose 1,5-bisphosphate carboxylase, small subunit (rbpc-L gene) Length = 432 Score = 85.7 bits (43), Expect = 2e-13 Identities = 111/137 (81%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 ||||||||||| || ||||||||||| || |||||||| | || | |||||| |||||| Sbjct: 350 gtgcacccgaanatgggcagcttccanatggtccagtacctnccattgtagtatccgggg 291 Query: 387 gagctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggcacccac 446 || || | || |||||| | ||||| || ||||| ||||||||||||||||| ||| | Sbjct: 290 gatctntggttntcacggtaaacgaatccnnccttgttgaactcgaggcagggcnccccc 231 Query: 447 ttggagcggatcaggta 463 ||||| |||| | |||| Sbjct: 230 ttggaacggancnggta 214
>dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 790 Score = 85.7 bits (43), Expect = 2e-13 Identities = 166/207 (80%) Strand = Plus / Minus Query: 198 ggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatg 257 |||||| ||||||| ||||| |||| ||||||||| ||||| | ||||||||| || || Sbjct: 576 ggtggcttgaaggcaatgaaactgatgcactgcacttgacggacgttgtcgaatccaata 517 Query: 258 atacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgt 317 || |||| ||| || | ||||||||||| ||| |||||| || || || | |||||| Sbjct: 516 attcggatgtatgcatttgggtactccttcttgcactcctctacttctttcaacacctga 457 Query: 318 gtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtag 377 | | || ||||| || ||||| ||||||||||||||||||||||| || ||||| ||| Sbjct: 456 gatgaatcagtgcatccaaacatgggcagcttccacattgtccagtaacgtccgtcatag 397 Query: 378 tacccgggggagctgttgtgctcacgg 404 ||||| || ||| || |||||||||| Sbjct: 396 taccccggtgagtggtggtgctcacgg 370 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 gtaagacagggtctcgaacttctt 530 ||||||||| |||||||||||||| Sbjct: 265 gtaagacagagtctcgaacttctt 242
>dbj|AB004883.1| Marchantia paleacea var. diptera mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 931 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||||||||||||| |||| ||||||||| |||||||||||||| |||||||| || Sbjct: 463 gtcggtgcacccgaacatgggcaacttccacatggtccagtatcggccatcgtagtatcc 404 Query: 383 ggg 385 ||| Sbjct: 403 ggg 401
>emb|X07367.1|BNRBCSSU B.napus mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit Length = 726 Score = 85.7 bits (43), Expect = 2e-13 Identities = 166/207 (80%) Strand = Plus / Minus Query: 198 ggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatg 257 |||||| || |||||||||| |||| |||||| || ||||| ||||||||| |||||| Sbjct: 558 ggtggcttgtaggcgatgaaactgatgcactggacttgacggttgttgtcgaatccgatg 499 Query: 258 atacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgt 317 || | || | |||||| |||||||||| ||||| ||| | ||| || || | ||| || Sbjct: 498 atcctgatgaaggcgttagggtactccgttttgcactcttggacttccttcaacacttga 439 Query: 318 gtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtag 377 | | ||| ||||| ||||||| || |||||||||||||||||||| ||||| |||||| Sbjct: 438 gcagagtcagtgcatccgaacaagggaagcttccacattgtccagtaacggccatcgtag 379 Query: 378 tacccgggggagctgttgtgctcacgg 404 || ||||||| ||| |||||||||| Sbjct: 378 tatccgggggtgcttccgtgctcacgg 352
>gb|L24497.1|PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, complete cds Length = 813 Score = 85.7 bits (43), Expect = 2e-13 Identities = 157/195 (80%) Strand = Plus / Minus Query: 210 gcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgtag 269 |||||||| |||| ||||||||| ||||| | |||||||| ||||||||||||| | || Sbjct: 543 gcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgatacggatgaag 484 Query: 270 gcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcggtg 329 | | ||||| |||| ||| |||| || | ||| || | |||||| | | ||||||| Sbjct: 483 gattgggggtaggccttcttggcctcttccagctctttcaacacctgggaagagtcggtg 424 Query: 330 cacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggggag 389 || |||||||| ||||||||||||||||||||||| | || || ||||| || ||||| Sbjct: 423 catccgaacatgggcagcttccacattgtccagtaccttccatcatagtatcctggggat 364 Query: 390 ctgttgtgctcacgg 404 ||||||| ||||||| Sbjct: 363 ctgttgttctcacgg 349 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 gtaagacagggtctcgaacttctt 530 |||||| ||||||||||||||||| Sbjct: 244 gtaagagagggtctcgaacttctt 221
>gb|AF396697.1| Nicotiana benthamiana s/s2 mRNA, partial cds Length = 411 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Minus Query: 292 cctcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttcc 351 |||||||||||||| | |||||| ||||| || |||||||||||||| |||| ||||| Sbjct: 145 cctcctcgacctcagccaacacctgagtggcatcagtgcacccgaacatgggcaacttcc 86 Query: 352 acattgtccagtatcggccgtcgtagtacccgggggagctgt 393 |||| |||||||||| ||| |||||||| || || ||||||| Sbjct: 85 acatggtccagtatctgccatcgtagtatcctggtgagctgt 44
>gb|AF162195.1|AF162195 Lactuca sativa ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit precursor, mRNA, complete cds Length = 956 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 |||||||| |||||||||| |||||||||||||||||| || || || ||||| |||||| Sbjct: 937 gtgcacccaaacataggcaacttccacattgtccagtagcgtccatcatagtatccgggg 878 Query: 387 gagctgttgtgctcacggaagacgaa 412 ||| || |||||||||| ||||||| Sbjct: 877 gagtggtggtgctcacggtagacgaa 852 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 ||||| ||||||||||||| |||||||||||||||||||| || || ||||| |||||| Sbjct: 449 gtgcatccgaacataggcaacttccacattgtccagtatcttccatcatagtatccgggg 390 Query: 387 ga 388 || Sbjct: 389 ga 388
>gb|AY267351.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS2) mRNA, complete cds Length = 787 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||| || Sbjct: 440 gtcggtgcatccgaacataggcaacttccacattgtccagtatcttccgtcatagtatcc 381 Query: 383 gggggagct 391 ||| ||||| Sbjct: 380 gggagagct 372 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 |||| ||||| |||||||| ||||| ||||| | |||||| || ||||||||||||| Sbjct: 555 aggcaatgaaactgacgcattgcacttgacggacgttgtcaaatccgatgatacgga 499
>gb|AY273795.1| Citrus limon ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, partial cds; nuclear gene for chloroplast product Length = 357 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 312 acctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccg 371 |||||||| || || |||||||| ||||| ||||||||||||||||||||||| || || Sbjct: 266 acctgtgttgcatctgtgcacccaaacatgggcagcttccacattgtccagtagcgtcca 207 Query: 372 tcgtagtacccgggggagctgttgtgctcacgg 404 |||||||| || || || |||| |||||||||| Sbjct: 206 tcgtagtatcctggtgacctgtggtgctcacgg 174
>emb|X84730.1|ASRBCS Artificial rbcS gene sequence Length = 420 Score = 81.8 bits (41), Expect = 2e-12 Identities = 125/153 (81%) Strand = Plus / Minus Query: 227 ctgcacctgacgcaggttgtcgaagccgatgatacggacgtaggcgtcagggtactcctt 286 |||||||||||| | ||| ||||||||||| ||||| ||| | ||||| ||||| | || Sbjct: 355 ctgcacctgacgaacgttatcgaagccgataatacgtacgaacgcgtccgggtatgcttt 296 Query: 287 tttgacctcctcgacctcattgagcacctgtgtggcgtcggtgcacccgaacataggcag 346 || | ||||||| || || || ||||| || ||||||||||| || ||||| || || Sbjct: 295 cttagcttcctcgagttctttcagtacctgggtagcgtcggtgcaaccaaacattggaag 236 Query: 347 cttccacattgtccagtatcggccgtcgtagta 379 ||||||||| |||||||| |||||||||||||| Sbjct: 235 cttccacatagtccagtagcggccgtcgtagta 203
>emb|X01722.1|NSRUB1 Nicotiana silvestris mRNA for the small subunit of ribulose bisphosphate carboxylase Length = 796 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| |||| ||||||||| ||||||| ||||||||| || |||||||||| Sbjct: 583 aggcgatgaaactgatgcactgcacttgacgcacgttgtcgaatccaatgatacggatcc 524 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| | ||||| |||| || |||| || |||||| | ||| || ||||| || | Sbjct: 523 aggcctgtgggtatgccttcttcgcctcttctacctcagccaacacttgggtggcatcag 464 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||| ||||||||||| ||||||||||| |||||||||| ||| || ||||| Sbjct: 463 tgcatccgaacataggtagcttccacatggtccagtatctgccatcatagta 412
>gb|AY220079.1| Nicotiana tabacum putative ribulose bisphosphate carboxylase small subunit protein precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 806 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||| ||||| |||| ||||||||| ||||||| ||||||||| || |||||||||| Sbjct: 583 aggcaatgaaactgatgcactgcacttgacgcacgttgtcgaatccaatgatacggatcc 524 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| || ||||| |||| || |||| | |||||| | ||| || ||||| || | Sbjct: 523 aggcctctgggtatgccttcttcgcctctcccacctcagctaacacttgggtggcatcag 464 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 ||||||| ||||| |||||||||||||| |||||||||| |||||| ||||| Sbjct: 463 tgcacccaaacatgggcagcttccacatggtccagtatctgccgtcatagta 412
>gb|AF312228.1|AF312228 Citrus reticulata ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit precursor, gene, partial cds, nuclear gene for chloroplast product Length = 353 Score = 79.8 bits (40), Expect = 1e-11 Identities = 154/192 (80%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgtaggcg 272 ||||| |||| ||||||||| |||||| |||||| || ||||| || |||||| | | Sbjct: 350 atgaaactgatgcactgcacttgacgcttgttgtcaaatccgataattcggacgaatgaa 291 Query: 273 tcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcggtgcac 332 | ||||| ||||| | ||||||| | ||||| || | ||||| || || || |||||| Sbjct: 290 tgtgggtattccttctggacctccccaacctccttcaaaacctgggttgcatctgtgcac 231 Query: 333 ccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggggagctg 392 || |||| ||||||||||||||||||||||| || || |||||||| || || |||||| Sbjct: 230 ccatacatgggcagcttccacattgtccagtagcgtccatcgtagtatcctggtgagctg 171 Query: 393 ttgtgctcacgg 404 | |||||||||| Sbjct: 170 tggtgctcacgg 159
>gb|J01308.1|TOBRBPC Nicotiana sylvestris ribulose-1,5-bisphosphate carboxylase small subunit mRNA Length = 453 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| |||| ||||||||| ||||||| ||||||||| || |||||||||| Sbjct: 241 aggcgatgaaactgatgcactgcacttgacgcacgttgtcgaatccaatgatacggatcc 182 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| | ||||| |||| || |||| || |||||| | ||| || ||||| || | Sbjct: 181 aggcctgtgggtatgccttcttcgcctcttctacctcagccaacacttgggtggcatcag 122 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||| ||||||||||| ||||||||||| |||||||||| ||| || ||||| Sbjct: 121 tgcatccgaacataggtagcttccacatggtccagtatctgccatcatagta 70
>gb|AF044400.1|AF044400 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2A (rbcS-P2A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 534 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||| || Sbjct: 261 gtcggtgcatccgaacataggcaacttccacattgtccagtatctcccgtcatagtatcc 202 Query: 383 ggg 385 ||| Sbjct: 201 ggg 199 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 |||| ||||| |||||||| ||||| ||||| | ||||||||| ||||||||||||| Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacgga 320
>gb|AF044399.1|AF044399 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1B (rbcS-P1B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 629 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||| || Sbjct: 261 gtcggtgcatccgaacataggcaacttccacattgtccagtatctcccgtcatagtatcc 202 Query: 383 ggg 385 ||| Sbjct: 201 ggg 199 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 |||| ||||| |||||||| ||||| ||||| | ||||||||| ||||||||||||| Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacgga 320
>gb|AF044398.1|AF044398 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1A (rbcS-P1A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 608 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||| || Sbjct: 261 gtcggtgcatccgaacataggcaacttccacattgtccagtatctcccgtcatagtatcc 202 Query: 383 ggg 385 ||| Sbjct: 201 ggg 199 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 ||||| |||||||| ||||| ||||| | ||||||||| ||||||||||||| Sbjct: 371 atgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacgga 320
>gb|AF044396.1|AF044396 Flaveria ramosissima ribulose-1,5-bisphosphate carboxylase small subunit R2 (rbcS-R2) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 574 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||| || Sbjct: 261 gtcggtgcatccgaacataggcaacttccacattgtccagtatcttccgtcatagtatcc 202 Query: 383 ggg 385 ||| Sbjct: 201 ggg 199 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 |||| ||||| |||| ||| ||||| ||||| | |||||| || ||||||||||||| Sbjct: 376 aggcaatgaaactgatgcattgcacttgacggacgttgtcaaatccgatgatacgga 320
>dbj|D00572.1|PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO small subunit, complete cds Length = 844 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 210 gcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgtag 269 |||||||| |||| ||||||||| ||||| | |||||||| ||||||||||||| | || Sbjct: 575 gcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgatacggatgaag 516 Query: 270 gcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcggtg 329 | | ||||| |||| ||| |||| || | ||| || | |||||| | | ||||||| Sbjct: 515 gactgggggtaagccttcttggcctcttccagctccttcaacacctgggaagagtcggtg 456 Query: 330 cacccgaacataggcagcttccacattgtccagta 364 || |||||||| ||||||||||||||||||||||| Sbjct: 455 catccgaacatgggcagcttccacattgtccagta 421 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 gtaagacagggtctcgaacttctt 530 |||||| ||||||||||||||||| Sbjct: 276 gtaagagagggtctcgaacttctt 253
>emb|Y00431.1|HARBCS Sunflower rbcS gene for RuBP carboxylase small subunit (EC 4.1.1.39) (RuBP carboxylase=ribulose 1.5-bisphosphate carboxylase/oxygenase) Length = 1400 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||| || Sbjct: 1167 gtcggtgcaaccgaacataggcaatttccacattgtccagtatcttccgtcatagtatcc 1108 Query: 383 gggggagctgttgtgctcacggaagac 409 |||||| ||| || ||||||| |||| Sbjct: 1107 gggggatctggcgttctcacggtagac 1081
>emb|X05079.1|HARUBISC Sunflower mRNA for ribulose 1,5-bisphosphate carboxylase RuBisCO SSU (E.C. 4.1.1.39) Length = 674 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||| || Sbjct: 423 gtcggtgcaaccgaacataggcaatttccacattgtccagtatcttccgtcatagtatcc 364 Query: 383 gggggagctgttgtgctcacggaagac 409 |||||| ||| || ||||||| |||| Sbjct: 363 gggggatctggcgttctcacggtagac 337
>emb|X65494.1|MSCARB Malus (unidentified species of crab apple) mRNA for rubisco-1,5-bisphosphate carboxylase Length = 853 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 210 gcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgtag 269 |||||||| |||| ||||||||| ||||| | |||||||| ||||||||||||| | || Sbjct: 579 gcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgatacggatgaag 520 Query: 270 gcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcggtg 329 | | ||||| |||| ||| |||| || | ||| || | |||||| | | ||||||| Sbjct: 519 gattgggggtaggccttcttggcctcttccagctctttcaacacctgggaagagtcggtg 460 Query: 330 cacccgaacataggcagcttccacattgtccagta 364 || |||||||| ||||||||||||||||||||||| Sbjct: 459 catccgaacatgggcagcttccacattgtccagta 425 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 gtaagacagggtctcgaacttctt 530 |||||| ||||||||||||||||| Sbjct: 280 gtaagagagggtctcgaacttctt 257
>emb|X55937.1|BNRBCSF1 Brassica napus rbcSF1 gene for ribulose-1,5-biphosphate carboxylase/oxygenase small subunit Length = 2006 Score = 77.8 bits (39), Expect = 4e-11 Identities = 165/207 (79%) Strand = Plus / Minus Query: 198 ggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatg 257 |||||| || |||||||||| |||| |||||| |||||||| ||||||||| |||||| Sbjct: 1515 ggtggcttgtaggcgatgaaactgatgcactggacctgacggttgttgtcgaatccgatg 1456 Query: 258 atacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgt 317 || | || | | |||| |||||||||| ||||| || | ||| || || | ||| || Sbjct: 1455 atcctgatgaaagcgttagggtactccgttttgcattcttggacttccttcaacacttga 1396 Query: 318 gtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtag 377 | | ||| ||||| ||||||| || |||||||||||||||||||| ||||| |||||| Sbjct: 1395 gcagagtcagtgcatccgaacaagggaagcttccacattgtccagtaacggccatcgtag 1336 Query: 378 tacccgggggagctgttgtgctcacgg 404 || ||||||| ||| |||||||||| Sbjct: 1335 tatccgggggtgcttccgtgctcacgg 1309
>gb|U29939.1|FPU29939 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS7) mRNA, complete cds Length = 743 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||| || Sbjct: 420 gtcggtgcatccgaacataggcaacttccacattgtccagtatcttccgtcatagtatcc 361 Query: 383 ggg 385 ||| Sbjct: 360 ggg 358
>gb|U29938.1|FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS6) mRNA, complete cds Length = 724 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||| || Sbjct: 405 gtcggtgcatccgaacataggcaacttccacattgtccagtatcttccgtcatagtatcc 346 Query: 383 ggg 385 ||| Sbjct: 345 ggg 343 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 ||||| |||| ||| ||||| ||||| | ||||||||| ||||||||||||| Sbjct: 515 atgaaactgatgcattgcacttgacggacgttgtcgaatccgatgatacgga 464
>gb|U29937.1|FPU29937 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS5) mRNA, complete cds Length = 731 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||| || Sbjct: 408 gtcggtgcatccgaacataggcaacttccacattgtccagtatcttccgtcatagtatcc 349 Query: 383 ggg 385 ||| Sbjct: 348 ggg 346
>gb|U29936.1|FPU29936 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS4) mRNA, complete cds Length = 753 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||| || Sbjct: 437 gtcggtgcatccgaacataggcaacttccacattgtccagtatcttccgtcatagtatcc 378 Query: 383 ggg 385 ||| Sbjct: 377 ggg 375
>gb|U29935.1|FPU29935 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS3) mRNA, complete cds Length = 746 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||| || Sbjct: 422 gtcggtgcatccgaacataggcaacttccacattgtccagtatcttccgtcatagtatcc 363 Query: 383 ggg 385 ||| Sbjct: 362 ggg 360
>gb|U29934.1|FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS2) mRNA, complete cds Length = 763 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||| || Sbjct: 434 gtcggtgcatccgaacataggcaacttccacattgtccagtatcttccgtcatagtatcc 375 Query: 383 ggg 385 ||| Sbjct: 374 ggg 372 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 210 gcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 |||||||| |||| |||||| || ||||| | |||||| || ||||||||||||| Sbjct: 547 gcgatgaaactgatgcactgaacttgacgaacgttgtcaaatccgatgatacgga 493
>emb|X92858.1|BPRBCS B.pendula rbcS gene Length = 651 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||| ||||||| ||||| |||||||||||||| |||||||| || || || ||||| || Sbjct: 567 gtcgttgcacccaaacatgggcagcttccacatggtccagtaacgtccatcatagtatcc 508 Query: 383 gggggagctgttgtgctcacgg 404 ||||| ||||||||||||||| Sbjct: 507 tggggacctgttgtgctcacgg 486
>gb|DQ336280.1| Vitis pseudoreticulata ribulose-1,5-bisphophate carboxylase/oxygenase small subunit mRNA, complete cds Length = 543 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 |||||||||||||| |||||||||||||| |||||||| | ||||||||||| || || Sbjct: 410 gtgcacccgaacatgggcagcttccacatggtccagtaccttccgtcgtagtatcctgga 351 Query: 387 gagctgttgtgctc 400 || ||||||||||| Sbjct: 350 gatctgttgtgctc 337
>gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 mRNA, complete cds Length = 772 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 ||||| || |||||||||||||||||||| |||||||| || || |||||||| || || Sbjct: 432 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctggt 373 Query: 387 gagctgttgtgctcacgg 404 || ||||||||||||||| Sbjct: 372 gacctgttgtgctcacgg 355 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 551 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 495
>gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 mRNA, complete cds Length = 830 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 ||||| || |||||||||||||||||||| |||||||| || || |||||||| || || Sbjct: 432 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctggt 373 Query: 387 gagctgttgtgctcacgg 404 || ||||||||||||||| Sbjct: 372 gacctgttgtgctcacgg 355 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 551 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 495
>gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS1 mRNA, complete cds Length = 750 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 ||||| || |||||||||||||||||||| |||||||| || || |||||||| || || Sbjct: 432 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctggt 373 Query: 387 gagctgttgtgctcacgg 404 || ||||||||||||||| Sbjct: 372 gacctgttgtgctcacgg 355 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 551 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 495
>gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 765 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 ||||| || |||||||||||||||||||| |||||||| || || |||||||| || || Sbjct: 429 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctggt 370 Query: 387 gagctgttgtgctcacgg 404 || ||||||||||||||| Sbjct: 369 gacctgttgtgctcacgg 352 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 548 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 492
>gb|AF162210.1|AF162210 Lactuca sativa ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; nuclear gene for chloroplast product Length = 835 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 ||||||||||||||||||| |||||||||||||||||| || || || ||||| |||||| Sbjct: 474 gtgcacccgaacataggcaacttccacattgtccagtagcgtccatcatagtatccgggg 415 Query: 387 ga 388 || Sbjct: 414 ga 413
>gb|AF039014.1|AF039014 Fritillaria agrestis clone TA8 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 330 cacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 ||||||||||| |||||||||||||||||||||||||| || |||||||| Sbjct: 539 cacccgaacatgggcagcttccacattgtccagtatcgcccatcgtagta 490
>gb|AF039011.1|AF039011 Fritillaria agrestis clone TA22 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 591 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 330 cacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 ||||||||||| |||||||||||||||||||||||||| || |||||||| Sbjct: 538 cacccgaacatgggcagcttccacattgtccagtatcgcccatcgtagta 489
>gb|AF039008.1|AF039008 Fritillaria agrestis clone TA15 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 330 cacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 ||||||||||| |||||||||||||||||||||||||| || |||||||| Sbjct: 539 cacccgaacatgggcagcttccacattgtccagtatcgcccatcgtagta 490
>emb|Y07779.1|BPRBCSSU Betula pendula mRNA for ribulose-1,5-bisphosphate carboxylase (rbcS gene) Length = 803 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||| ||||||| ||||| |||||||||||||| |||||||| || || || ||||| || Sbjct: 444 gtcgttgcacccaaacatgggcagcttccacatggtccagtaacgtccatcatagtatcc 385 Query: 383 gggggagctgttgtgctcacgg 404 ||||| ||||||||||||||| Sbjct: 384 tggggacctgttgtgctcacgg 363
>gb|AY487801.1| Capsicum annuum Cristal-Glass1 protein mRNA, complete cds Length = 769 Score = 73.8 bits (37), Expect = 6e-10 Identities = 157/197 (79%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| |||| |||||||| ||||| | |||||| || ||||||||||||| Sbjct: 561 aggcgatgaaactgatacactgcacttgacgaacgttgtcaaatccgatgatacggatcc 502 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| | ||||| |||| || |||||| ||| ||||| | ||||| || || || | Sbjct: 501 aggcctgtgggtaagccttctttgcctcctggacttcattcaagacctgggtagcatcag 442 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggggg 387 | ||||||||||| |||| ||||||||| |||||||| | ||| |||||||| || || | Sbjct: 441 tacacccgaacatgggcaacttccacatggtccagtacctgccatcgtagtatccaggtg 382 Query: 388 agctgttgtgctcacgg 404 | |||| |||||||||| Sbjct: 381 acctgtggtgctcacgg 365
>dbj|AB120708.1| Physcomitrella patens subsp. patens PprbcS1 mRNA for Ribulose bisphosphate carboxylase small chain, complete cds Length = 827 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||||||||||||||||| |||| ||||||||| |||||||| || ||||||||||| Sbjct: 507 gtcggtgcacccgaacatgggcaacttccacatggtccagtaccgcccgtcgtagta 451
>gb|AF065615.1|AF065615 Capsicum annuum ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds Length = 801 Score = 73.8 bits (37), Expect = 6e-10 Identities = 157/197 (79%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| |||| |||||||| ||||| | |||||| || ||||||||||||| Sbjct: 582 aggcgatgaaactgatacactgcacttgacgaacgttgtcaaatccgatgatacggatcc 523 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| | ||||| |||| || |||||| ||| ||||| | ||||| || || || | Sbjct: 522 aggcctgtgggtaagccttctttgcctcctggacttcattcaagacctgggtagcatcag 463 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggggg 387 | ||||||||||| |||| ||||||||| |||||||| | ||| |||||||| || || | Sbjct: 462 tacacccgaacatgggcaacttccacatggtccagtacctgccatcgtagtatccaggtg 403 Query: 388 agctgttgtgctcacgg 404 | |||| |||||||||| Sbjct: 402 acctgtggtgctcacgg 386
>dbj|AB026685.1| Physcomitrella patens mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 818 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||||||||||||||||| |||||||||||||| |||||||| || || |||||||| Sbjct: 518 gtcggtgcacccgaacatgggcagcttccacatggtccagtagcgcccatcgtagta 462
>emb|AJ419827.1|CAR419827 Coffea arabica rbcs1 gene for rubisco small subunit Length = 2034 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 1838 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 1779 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 1778 cagtagcgtccgtcatagta 1759 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 1925 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 1879
>emb|X03821.1|PERBCS11 Petunia x hybrida rbcS gene (ssu11A) for ribulose 1,5-bisphosphate carboxylase small subunit Length = 1314 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 318 gtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtag 377 ||||| ||||||||||||||||| |||||||||||||| |||||||| | ||| || ||| Sbjct: 1058 gtggcatcggtgcacccgaacatgggcagcttccacatggtccagtacctgccatcatag 999 Query: 378 tacc 381 |||| Sbjct: 998 tacc 995
>gb|AF101233.1|AF101233 Manihot esculenta clone U291 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 780 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 410 gtgcacccaaacattggcagcttccacattgtccagtaacgtccatcgtagtaccc 355
>gb|AF101232.1|AF101232 Manihot esculenta clone U216 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 793 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 451 gtgcacccaaacattggcagcttccacattgtccagtaacgtccatcgtagtaccc 396
>gb|AF101230.1|AF101230 Manihot esculenta clone R312 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 811 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 410 gtgcacccaaacattggcagcttccacattgtccagtaacgtccatcgtagtaccc 355
>gb|DQ300277.1| Coffea arabica cultivar Rume Sudan plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 421 cagtagcgtccgtcatagta 402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300276.1| Coffea arabica cultivar Colombia plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 421 cagtagcgtccgtcatagta 402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300275.1| Coffea arabica cultivar SL-28 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 421 cagtagcgtccgtcatagta 402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300274.1| Coffea arabica cultivar Kent plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 421 cagtagcgtccgtcatagta 402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300273.1| Coffea arabica cultivar F-502 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 421 cagtagcgtccgtcatagta 402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300272.1| Coffea arabica cultivar Tipica plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 421 cagtagcgtccgtcatagta 402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300271.1| Coffea arabica cultivar Bourbon plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 421 cagtagcgtccgtcatagta 402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300270.1| Coffea arabica cultivar Mundo novo plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 421 cagtagcgtccgtcatagta 402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300269.1| Coffea arabica cultivar Ethiopia 167 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 421 cagtagcgtccgtcatagta 402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300268.1| Coffea arabica cultivar Ethiopia 87 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 421 cagtagcgtccgtcatagta 402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300267.1| Coffea arabica cultivar Alghe plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 421 cagtagcgtccgtcatagta 402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300266.1| Coffea arabica cultivar Dilla plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| || |||||||| || ||||| ||||| ||| ||||||||||||||||||| ||| Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422 Query: 360 cagtatcggccgtcgtagta 379 ||||| || ||||| ||||| Sbjct: 421 cagtagcgtccgtcatagta 402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 213 atgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgat 259 ||||| |||| ||||||||||||||| | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>dbj|AU066498.1| Chlamydomonas sp. HS-5 mRNA for ribulose-bisphosphate carboxylase small chain precursor, NaCl inducible, complete cds, clone:NaEX96-11 Length = 587 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 300 acctcattgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtc 359 ||||| ||||||||||| | |||||| ||||| || ||||| |||||||||||||| ||| Sbjct: 355 acctccttgagcacctgggcggcgtcagtgcagccaaacatgggcagcttccacatcgtc 296 Query: 360 cagtatcggccgtcgtagta 379 ||||| ||| ||||||||| Sbjct: 295 cagtagcggttgtcgtagta 276
>gb|AY267350.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS1) mRNA, complete cds Length = 735 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| || |||||||||| |||||||||||||||||||| ||||| ||||| || Sbjct: 416 gtcggtgcatccaaacataggcaacttccacattgtccagtatcttccgtcatagtatcc 357 Query: 383 ggg 385 ||| Sbjct: 356 ggg 354 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 |||| ||||| |||||||| ||||| ||||| | ||||||||| ||||||||||||| Sbjct: 531 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacgga 475
>emb|X02353.1|NTRUBSS Tobacco gene for ribulose 1,5-bisphosphate carboxylase small subunit Length = 2362 Score = 69.9 bits (35), Expect = 9e-09 Identities = 128/159 (80%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||| ||||| |||| ||||||||| ||||||| ||||||||| || |||||||||| Sbjct: 1964 aggcaatgaaactgatgcactgcacttgacgcacgttgtcgaatccaatgatacggatcc 1905 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| | ||||| |||| || |||| || |||||| | ||| || ||||| || | Sbjct: 1904 aggcctgtgggtatgccttcttcgcctcttccacctcagccaacacttgggtggcatcag 1845 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatc 366 |||| ||||||||||| ||||||||||| |||||||||| Sbjct: 1844 tgcatccgaacataggtagcttccacatggtccagtatc 1806
>dbj|AB240146.1| Chlorella pyrenoidosa rbcS mRNA for RuBisCO small subunits, partial cds Length = 375 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 322 cgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtac 380 |||||||||| |||||||| |||||||||||||| |||||||| ||| |||||||||| Sbjct: 208 cgtcggtgcagccgaacatgggcagcttccacatggtccagtagcggttgtcgtagtac 150
>gb|AF044401.1|AF044401 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2B (rbcS-P2B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 532 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| ||||||||| |||||||||| ||||| ||||| || Sbjct: 261 gtcggtgcatccgaacataggcaacttccacatcgtccagtatcttccgtcatagtatcc 202 Query: 383 ggg 385 ||| Sbjct: 201 ggg 199 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 |||| ||||| |||||||| ||||| ||||| | ||||||||| ||||||||||||| Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacgga 320
>emb|X53426.1|NSRUBSSU Nicotiana sylvestris NySS41 and partial NySS42 genes for RUBISCO small subunit (SSU) Length = 2795 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 312 acctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccg 371 ||||| ||||| || |||||||||||||| |||| ||||||||| |||||||||| ||| Sbjct: 1549 acctgagtggcatcagtgcacccgaacatgggcaacttccacatggtccagtatctgcca 1490 Query: 372 tcgtagtaccc 382 || |||||||| Sbjct: 1489 tcatagtaccc 1479
>emb|X05037.1|FTRBCR Flaveria trinervia mRNA for ribulose 1,5-biphosphate carboxylase Length = 752 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| ||||||||| |||||||||| ||||| ||||| || Sbjct: 412 gtcggtgcatccgaacataggcaacttccacatcgtccagtatcttccgtcatagtatcc 353 Query: 383 ggg 385 ||| Sbjct: 352 ggg 350 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 |||| ||||| |||||||| ||||| ||||| | |||||| || ||||||||||||| Sbjct: 527 aggcaatgaaactgacgcattgcacttgacggacgttgtcaaatccgatgatacgga 471
>gb|U29933.1|FPU29933 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS1) mRNA, complete cds Length = 743 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||| || Sbjct: 419 gtcggtgcatccgaacataggcaatttccacattgtccagtatcttccgtcatagtatcc 360 Query: 383 ggg 385 ||| Sbjct: 359 ggg 357
>emb|X17546.1|EGRBCS Euglena gracilis rbcS mRNA for the small subunits of ribulose 1,5-bisphosphate carboxylase/oxygenase (EC 4.1.1.39) Length = 4300 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcgg 368 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 3306 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtagcgg 3247 Query: 369 ccgtcgtagta 379 ||||||||| Sbjct: 3246 ttgtcgtagta 3236 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagta 364 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 3738 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 3683 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagta 364 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 2877 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 2822 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagta 364 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 2442 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 2387 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagta 364 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 2013 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 1958 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagta 364 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1581 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 1526 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagta 364 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 720 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 665 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 319 tggcgtcggtgcacccgaacataggcagcttccacattgtccagta 364 ||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1142 tggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 1097
>emb|X79152.1|EGRBCS1 E.gracilis rbcS 1 gene exons 1 to 19 Length = 4446 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcgg 368 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 3827 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 3768 Query: 369 ccgtcgtagta 379 ||||||||| Sbjct: 3767 ttgtcgtagta 3757 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcgg 368 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 2531 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 2472 Query: 369 ccgtcgtagta 379 ||||||||| Sbjct: 2471 ttgtcgtagta 2461 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcgg 368 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 1667 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 1608 Query: 369 ccgtcgtagta 379 ||||||||| Sbjct: 1607 ttgtcgtagta 1597 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagta 364 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 3395 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 3340 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagta 364 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 2099 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 2044 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagta 364 |||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 803 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 748 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 309 agcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcgg 368 |||||||| ||||||| ||||| || ||||| |||||||||||||| |||||||| ||| Sbjct: 2963 agcacctggctggcgtccgtgcagccaaacatgggcagcttccacatggtccagtaccgg 2904 Query: 369 ccgtcgtagta 379 ||||||||| Sbjct: 2903 ttgtcgtagta 2893 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 319 tggcgtcggtgcacccgaacataggcagcttccacattgtccagta 364 ||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1225 tggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 1180
>gb|AY705444.1| Fagus sylvatica chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, complete cds; nuclear gene for chloroplast product Length = 562 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 311 cacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggcc 370 |||||||||||| |||||||| || ||||| |||||||||||||| |||||| || || Sbjct: 427 cacctgtgtggcatcggtgcatccaaacatgggcagcttccacatcacccagtaacgtcc 368 Query: 371 gtcgtagtacccgggggagctgttgtgctcacgg 404 || |||||||| || || ||||||| ||||||| Sbjct: 367 atcatagtaccctggtgacctgttgttctcacgg 334
>emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene) Length = 761 Score = 67.9 bits (34), Expect = 4e-08 Identities = 145/182 (79%) Strand = Plus / Minus Query: 198 ggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatg 257 |||||| || |||| ||||| |||| |||||| || || || | |||||||||||||||| Sbjct: 560 ggtggcttggaggcaatgaaactgatgcactggacttggcgaacgttgtcgaagccgatg 501 Query: 258 atacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgt 317 || | ||| |||||| ||||| ||||| ||| |||||| | |||| | || || Sbjct: 500 atcctgacccaggcgttggggtattccttcttgcactcctccagctcagcaatgacttgg 441 Query: 318 gtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtag 377 |||| |||||||| |||||||| || |||||||||||||||||||| || ||||| ||| Sbjct: 440 ctggcatcggtgcatccgaacatgggtagcttccacattgtccagtagcgtccgtcatag 381 Query: 378 ta 379 || Sbjct: 380 ta 379
>dbj|AB208643.1| Fragaria x ananassa FrRuBisCO19 pseudogene mRNA for RuBisCO small subunit Length = 306 Score = 67.9 bits (34), Expect = 4e-08 Identities = 157/197 (79%), Gaps = 1/197 (0%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| |||| |||||| || ||||| | |||||||| ||||||||||||| | Sbjct: 197 aggcgatgaaactgatgcactgaacttgacggacattgtcgaatccgatgatacggatga 138 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 | || | ||||| |||| ||| ||||||||| ||| || | ||| || | | |||| Sbjct: 137 aagcatttgggtaagccttcttggcctcctcgagctccttcaacacttgggaagantcgg 78 Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggggg 387 |||| |||||||| |||| |||||||| |||||||| |||||||||||||| || || | Sbjct: 77 tgcatccgaacatgggcaa-ttccacatggtccagtagcggccgtcgtagtatcccggtg 19 Query: 388 agctgttgtgctcacgg 404 | |||| || ||||||| Sbjct: 18 aactgtggttctcacgg 2
>emb|AJ538410.1|NTA538410 Nicotiana tabacum cDNA-AFLP-fragment BC1-M32-023 Length = 221 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 318 gtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtag 377 ||||| || |||||||| ||||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 41 gtggcatcagtgcacccaaacatgggcagcttccacatggtccagtatctgccgtcatag 100 Query: 378 ta 379 || Sbjct: 101 ta 102
>emb|X05985.1|LERBCS3B Tomato rbcS3B gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit Length = 1054 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 210 gcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgtag 269 |||||||| |||| ||||||||| ||||| | |||||||| |||||||||||||| | Sbjct: 975 gcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgatacggacccat 916 Query: 270 gcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcggtg 329 || | |||||| |||| || |||||| |||||| | ||||| || || || ||| Sbjct: 915 gcctgagggtaagccttctttgcctcctgcacctcagccaagacctgggttgcatcagtg 856 Query: 330 cacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 ||||| ||||| |||| ||||||||| |||||||||| ||| |||||||| Sbjct: 855 cacccaaacatgggcaacttccacatggtccagtatctgccatcgtagta 806
>gb|AF039015.1|AF039015 Fritillaria agrestis clone TA1 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 333 ccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 539 ccgaacatgggcagcttccacattgtccagtaccgcccatcgtagtaccc 490
>gb|AF039013.1|AF039013 Fritillaria agrestis clone TA26 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 333 ccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 539 ccgaacatgggcagcttccacattgtccagtaccgcccatcgtagtaccc 490
>gb|AF039010.1|AF039010 Fritillaria agrestis clone TA24 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 333 ccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 539 ccgaacatgggcagcttccacattgtccagtagcgcccatcgtagtaccc 490
>gb|AF039009.1|AF039009 Fritillaria agrestis clone TA23 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 333 ccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 539 ccgaacatgggcagcttccacattgtccagtaccgtccatcgtagtaccc 490
>gb|AF031543.1|AF031543 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type IV (rbcS4) mRNA, complete cds Length = 732 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 333 ccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 414 ccgaacatcggcagcttccacattgtccagtagcgcccatcgtagtaccc 365
>gb|AF024574.1|AF024574 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type III (rbcS3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 333 ccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 419 ccgaacatgggcagcttccacattgtccagtaccgcccatcgtagtaccc 370
>gb|AF024572.1|AF024572 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type I (rbcS1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 713 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 333 ccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 413 ccgaacatcggcagcttccacattgtccagtagcgcccatcgtagtaccc 364
>gb|U39856.1|GSU39856 Glycine soja ribulose 1,5-bisphosphate carboxylase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1089 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 ||||| || |||||||||||||||||||| |||||| | || || |||||||| || || Sbjct: 949 gtgcaaccaaacataggcagcttccacatggtccagcagcgtccatcgtagtatcctggt 890 Query: 387 gagctgttgtgctcacgg 404 || ||||||||||||||| Sbjct: 889 gacctgttgtgctcacgg 872 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 1068 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 1012
>gb|L26605.1|SLARBCS Stellaria longipes ribulose-1,5-bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 723 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 321 gcgtcggtgcacccgaacataggcagcttccacattgtccagtatc 366 ||||| |||||||| |||||||||||||||||||| |||||||||| Sbjct: 442 gcgtctgtgcacccaaacataggcagcttccacatggtccagtatc 397 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 ggccacacctgcatgcatctga 565 |||||||||||||||||||||| Sbjct: 217 ggccacacctgcatgcatctga 196
>gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxylase small subunit (SRS4) gene, complete cds Length = 2185 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 ||||| || |||||||||||||||||||| |||||||| || || |||||||| || | Sbjct: 1600 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctagt 1541 Query: 387 gagctgttgtgctcacgg 404 || ||||||||||||||| Sbjct: 1540 gacctgttgtgctcacgg 1523 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 1719 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 1663
>dbj|D14001.1|LAURBCS Lettuce mRNA for riburose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 758 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 ||||| ||||||||||||| |||||||||||||||||||| || || ||||| |||||| Sbjct: 441 gtgcatccgaacataggcaacttccacattgtccagtatcttccatcatagtatccgggg 382 Query: 387 ga 388 || Sbjct: 381 ga 380
>dbj|D11112.1|TOMRBCO Tomato ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 4124 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 210 gcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgtag 269 |||||||| |||| ||||||||| ||||| | |||||||| |||||||||||||| | Sbjct: 4045 gcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgatacggacccat 3986 Query: 270 gcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcggtg 329 || | |||||| |||| || |||||| |||||| | ||||| || || || ||| Sbjct: 3985 gcctgagggtaagccttctttgcctcctgcacctcagccaagacctgggttgcatcagtg 3926 Query: 330 cacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 ||||| ||||| |||| ||||||||| |||||||||| ||| |||||||| Sbjct: 3925 cacccaaacatgggcaacttccacatggtccagtatctgccatcgtagta 3876
>gb|L10213.1|CIP6RSS Mesembryanthemum crystallinum (clone: rbcs-6) rubisco small subunit gene, complete cds Length = 3024 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||||||||| ||||| || ||||| ||||||| ||||||||| ||||||||||||| | Sbjct: 2640 aggcgatgaaactgacacattgcacttgacgcacgttgtcgaatccgatgatacggatga 2581 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctca 305 |||| || ||||| |||| ||| |||| |||| |||| Sbjct: 2580 aggcctcggggtaagccttcttggcctcttcgagctca 2543 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 ||||| |||||||| |||| |||||||||||||||||| || || |||||||| Sbjct: 2521 gtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 2469
>dbj|AB006080.1| Fagus crenata mRNA for small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase, complete cds Length = 789 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 311 cacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggcc 370 |||||||||||| |||||||| || ||||| |||||||||||||| |||||| || || Sbjct: 463 cacctgtgtggcatcggtgcatccaaacatgggcagcttccacatcacccagtaacgtcc 404 Query: 371 gtcgtagtacccgggggagctgttgtgctcacgg 404 || |||||||| || || ||||||| ||||||| Sbjct: 403 atcatagtaccctggtgacctgttgttctcacgg 370
>gb|AY843526.1| Ammopiptanthus mongolicus ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 824 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 328 tgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccggggg 387 ||||||| |||||||||||||||||||| |||||||| || || || ||||| || || | Sbjct: 429 tgcacccaaacataggcagcttccacatggtccagtagcgtccatcatagtatccaggtg 370 Query: 388 agctgttgtgctcacgg 404 | ||||||| ||||||| Sbjct: 369 acctgttgttctcacgg 353
>gb|BT012936.1| Lycopersicon esculentum clone 114099R, mRNA sequence Length = 1261 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||||||||||||| |||| ||||||||| |||||||||| ||| |||||||| Sbjct: 990 gtgcacccgaacatgggcaacttccacatggtccagtatctgccatcgtagta 938 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 210 gcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggac 265 |||||||| |||| ||||||||| ||||| | |||||||| |||||||||||||| Sbjct: 1107 gcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgatacggac 1052
>emb|X05986.1|LERBCS3C Tomato rbcS3C gene for ribulose 1,5-biphosp[hate carboxylase/oxygenase small subunit Length = 1341 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||||||||||||| |||| ||||||||| |||||||||| ||| |||||||| Sbjct: 880 gtgcacccgaacatgggcaacttccacatggtccagtatctgccatcgtagta 828 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 210 gcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggac 265 |||||||| |||| ||||||||| ||||| | |||||||| |||||||||||||| Sbjct: 997 gcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgatacggac 942
>emb|X05984.1|LERBCS3A Tomato rbcS3A gene for ribulose 1,5-bisphosphate carboxylae/oxygenase small subunit Length = 1520 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||||||||||||| |||| ||||||||| |||||||||| ||| |||||||| Sbjct: 960 gtgcacccgaacatgggcaacttccacatggtccagtatctgccatcgtagta 908 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 210 gcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggac 265 |||||||| |||| ||||||||| ||||| | |||||||| |||||||||||||| Sbjct: 1077 gcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgatacggac 1022
>emb|X13711.1|NPRBCS8B Nicotiana plumbaginifolia rbcS-8B gene for ribulose bisphosphate carboxylase small subunit Length = 2293 Score = 65.9 bits (33), Expect = 1e-07 Identities = 126/157 (80%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||| ||||| |||| ||||||||| ||||||| ||||||||| || || |||||||| Sbjct: 1972 aggcaatgaaactgatgcactgcacttgacgcacgttgtcgaatccaataatacggaccc 1913 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| | ||||| |||| || |||| || |||||| | ||| || ||||| || | Sbjct: 1912 aggcctgtgggtatgccttcttcgcctcttccacctcagccaacacttgggtggcatcag 1853 Query: 328 tgcacccgaacataggcagcttccacattgtccagta 364 |||| ||||||||||| ||||||||||| |||||||| Sbjct: 1852 tgcatccgaacataggtagcttccacatggtccagta 1816
>gb|U80810.1|CSU80810 Chloromonas sp. ANT3 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS1) gene, nuclear gene encoding chloroplast protein, partial cds Length = 1387 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 319 tggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagt 378 ||||||| ||||| |||||||| |||||||||||||| |||||||| ||| |||||||| Sbjct: 1183 tggcgtcagtgcagccgaacatgggcagcttccacatggtccagtaacggttgtcgtagt 1124 Query: 379 a 379 | Sbjct: 1123 a 1123
>gb|DQ286548.1| Pyrus pyrifolia ribulose-1,5-bisphosphate carboxylase small subunit-like gene, complete sequence; plastid Length = 549 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 210 gcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacg 266 ||||||||||||| ||||||||| || || | ||||||||| ||||||||||||||| Sbjct: 523 gcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacggacg 467 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagta 364 ||||||||| || ||||| || |||||||||||||||||||| Sbjct: 410 gtcggtgcatccaaacatgggaagcttccacattgtccagta 369
>gb|U39857.1|GTU39857 Glycine tomentella ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1069 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 1048 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 992 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagta 364 ||||| || |||| ||||||||||||||| |||||||| Sbjct: 929 gtgcagccaaacacaggcagcttccacatggtccagta 892
>gb|M13544.1|TOMRBCSC Tomato (L.esculentum) ribulose-1,5-bisphosphate carboxylase/oxygenase (RBCS) small subunit gene, clone Rbcs-3A Length = 1027 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagta 379 |||||||||||||| |||| ||||||||| |||||||||| ||| |||||||| Sbjct: 718 gtgcacccgaacatgggcaacttccacatggtccagtatctgccatcgtagta 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 210 gcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggac 265 |||||||| |||| ||||||||| ||||| | |||||||| |||||||||||||| Sbjct: 835 gcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgatacggac 780
>gb|M36685.1|TOBRBCS8B N.plumbaginifolia ribulose bisphosphate carboxylase (rbcS-8B) gene, complete cds Length = 2293 Score = 65.9 bits (33), Expect = 1e-07 Identities = 126/157 (80%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacggacgt 267 |||| ||||| |||| ||||||||| ||||||| ||||||||| || || |||||||| Sbjct: 1972 aggcaatgaaactgatgcactgcacttgacgcacgttgtcgaatccaataatacggaccc 1913 Query: 268 aggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgtgtggcgtcgg 327 |||| | ||||| |||| || |||| || |||||| | ||| || ||||| || | Sbjct: 1912 aggcctgtgggtatgccttcttcgcctcttccacctcagccaacacttgggtggcatcag 1853 Query: 328 tgcacccgaacataggcagcttccacattgtccagta 364 |||| ||||||||||| ||||||||||| |||||||| Sbjct: 1852 tgcatccgaacataggtagcttccacatggtccagta 1816
>gb|M29642.1|PETRBCB Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds Length = 212 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 318 gtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtag 377 ||||| || |||||||||||||| |||||||||||||| |||||||| | ||| || ||| Sbjct: 77 gtggcatcagtgcacccgaacatgggcagcttccacatggtccagtacctgccatcatag 18 Query: 378 taccc 382 ||||| Sbjct: 17 taccc 13 Score = 44.1 bits (22), Expect = 0.53 Identities = 46/54 (85%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatac 261 |||| ||||| |||| ||| ||||| ||||| | |||||||||||| ||||||| Sbjct: 187 aggcaatgaaactgatgcattgcacttgacgtacgttgtcgaagccaatgatac 134
>emb|X16435.1|SARUBISC Mustard Rubisco mRNA for the small subunit of ribulose bisphosphate carboxylase Length = 322 Score = 63.9 bits (32), Expect = 6e-07 Identities = 149/188 (79%) Strand = Plus / Minus Query: 198 ggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatg 257 |||||| || |||||||||| |||| |||||| || ||||| ||||||||| |||||| Sbjct: 230 ggtggcttgtaggcgatgaaactgatgcactggacttgacggttgttgtcgaatccgatg 171 Query: 258 atacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgt 317 || | || | |||| | |||||||||||||||| || | ||| || || | ||| || Sbjct: 170 attctgatgaaggcattagggtactcctttttgcattcttggacttccttcaacacttga 111 Query: 318 gtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtag 377 | | ||| ||||| ||||||| || |||||||||||||||||||| || || |||||| Sbjct: 110 gcagagtcagtgcatccgaacaagggaagcttccacattgtccagtaacgaccatcgtag 51 Query: 378 tacccggg 385 || ||||| Sbjct: 50 tatccggg 43
>emb|X54464.1|LLRBC5CM L.laricina mRNA for ribulose bisphosphate carboxylase (LLRBC5C) Length = 678 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 379 gtgcatccgaacataggcagcttccacatcacccagtatctcccgtcgtagtaccc 324
>emb|X54462.1|LLRBC3CM L.laricina mRNA for ribulose bisphosphate carboxylase (LLRBC3C) Length = 663 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 452 gtgcatccgaacataggcagcttccacatcacccagtatctcccgtcgtagtaccc 397
>emb|X16039.1|LLRBCS Larix laricina rbcS gene for ribulose-1,5-carboxylase/oxygenase (EC 4.1.1.39) Length = 3679 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 2248 gtgcatccgaacataggcagcttccacatcacccagtatctcccgtcgtagtaccc 2193
>gb|AF101231.1|AF101231 Manihot esculenta clone R33 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 824 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||| |||||||||||||| |||||||| || || ||||||||||| Sbjct: 423 gtgcacccaaacatgggcagcttccacatggtccagtagcgaccatcgtagtaccc 368
>gb|AF101228.1|AF101228 Manihot esculenta clone R214 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 780 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||| |||||||||||||| |||||||| || || ||||||||||| Sbjct: 405 gtgcacccaaacatgggcagcttccacatggtccagtagcgaccatcgtagtaccc 350
>gb|M96583.1|MNHRUBISCO Manihot esculenta ribulose 1,5-bisphosphate carboxylase mRNA, complete cds Length = 1093 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||| |||||||||||||| |||||||| || || ||||||||||| Sbjct: 676 gtgcacccaaacatgggcagcttccacatggtccagtagcgaccatcgtagtaccc 621
>gb|M95930.1|MNHRBCSA Manihot esculenta (clone rubssr37) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit EC 4.1.1.39 (rbc S) mRNA sequence Length = 1162 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 |||||||| ||||| |||||||||||||| |||||||| || || ||||||||||| Sbjct: 676 gtgcacccaaacatgggcagcttccacatggtccagtagcgaccatcgtagtaccc 621
>ref|NM_123203.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38420 mRNA, complete cds Length = 837 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || ||||||||||||||||||||||| || || ||||| || Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcgtccatcatagtatcc 394 Query: 383 ggg 385 ||| Sbjct: 393 ggg 391
>ref|NM_123204.3| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38430 mRNA, complete cds Length = 808 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 431 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagtatcc 372 Query: 383 ggg 385 ||| Sbjct: 371 ggg 369
>ref|NM_123202.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410 transcript variant AT5G38410.1 mRNA, complete cds Length = 925 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagtatcc 394 Query: 383 ggg 385 ||| Sbjct: 393 ggg 391
>ref|NM_001036904.1| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410 transcript variant AT5G38410.2 mRNA, complete cds Length = 963 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 491 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagtatcc 432 Query: 383 ggg 385 ||| Sbjct: 431 ggg 429
>gb|AY143814.1| Arabidopsis thaliana At5g38430/F1O19.10 mRNA, complete cds Length = 546 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagtatcc 343 Query: 383 ggg 385 ||| Sbjct: 342 ggg 340
>gb|BT000721.1| Arabidopsis thaliana clone RAFL04-15-J15 (R09791) putative ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410) mRNA, complete cds Length = 772 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 454 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagtatcc 395 Query: 383 ggg 385 ||| Sbjct: 394 ggg 392
>gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence Length = 2116 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 1807 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagtatcc 1748 Query: 383 ggg 385 ||| Sbjct: 1747 ggg 1745
>gb|AY051025.1| Arabidopsis thaliana putative RuBisCO small 3b subunit precursor (At5g38410) mRNA, complete cds Length = 577 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagtatcc 343 Query: 383 ggg 385 ||| Sbjct: 342 ggg 340
>gb|AF360124.1| Arabidopsis thaliana putative ribulose bisphosphate carboxylase small chain 3b precursor (At5g38410) mRNA, complete cds Length = 720 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagtatcc 394 Query: 383 ggg 385 ||| Sbjct: 393 ggg 391
>emb|V00458.1|GMRUBP Glycine max gene encoding ribulose-1,5-bisphosphate carboxylase small subunit Length = 1601 Score = 61.9 bits (31), Expect = 2e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 327 gtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtacccgggg 386 ||||| || |||||||||||||||||||| |||||||| || || || ||||| | || Sbjct: 1166 gtgcagccaaacataggcagcttccacatggtccagtagcgtccatcatagtatcnaggt 1107 Query: 387 gagctgttgtgctcacgg 404 || ||||||||||||||| Sbjct: 1106 gacctgttgtgctcacgg 1089 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 208 aggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatgatacgga 264 ||||||||||||||| ||||||||| || || | |||||| || || |||||||||| Sbjct: 1285 aggcgatgaagctgatgcactgcacttggcgaacgttgtcaaatccaatgatacgga 1229
>emb|X61097.1|BNRBCS B.napus rbcS gene for the small subunit of ribulose 1,5-bisphosphate carboxylase Length = 2714 Score = 61.9 bits (31), Expect = 2e-06 Identities = 163/207 (78%) Strand = Plus / Minus Query: 198 ggtggcctgaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatg 257 |||||| || |||||||||| |||| |||||| || ||||| ||||||||| |||||| Sbjct: 2415 ggtggcttgtaggcgatgaaactgatgcactggacttgacggttgttgtcgaatccgatg 2356 Query: 258 atacggacgtaggcgtcagggtactcctttttgacctcctcgacctcattgagcacctgt 317 || | || | | |||| |||||||||| ||||| || | ||| || || | ||| || Sbjct: 2355 atcctgatgaaagcgttagggtactccgttttgcattcttggacttccttcaacacttga 2296 Query: 318 gtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtag 377 | | ||| ||||| ||||||| || |||||||||||||||||||| || || |||||| Sbjct: 2295 gcagagtcagtgcatccgaacaagggaagcttccacattgtccagtaacgtccatcgtag 2236 Query: 378 tacccgggggagctgttgtgctcacgg 404 || ||||||| ||| |||||||||| Sbjct: 2235 tatccgggggtgcttccgtgctcacgg 2209
>gb|AY098970.1| Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds Length = 546 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagtatcc 343 Query: 383 ggg 385 ||| Sbjct: 342 ggg 340
>gb|AY093288.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420) mRNA, complete cds Length = 586 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || ||||||||||||||||||||||| || || ||||| || Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcgtccatcatagtatcc 343 Query: 383 ggg 385 ||| Sbjct: 342 ggg 340
>gb|AF462822.1|AF462822 Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds Length = 764 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagtatcc 394 Query: 383 ggg 385 ||| Sbjct: 393 ggg 391
>gb|AY065026.1| Arabidopsis thaliana AT5g53140/MFH8_8 mRNA, complete cds Length = 2204 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 77 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagtatcc 18 Query: 383 ggg 385 ||| Sbjct: 17 ggg 15
>gb|AY064686.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410; MXI10.13) mRNA, complete cds Length = 595 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagtatcc 343 Query: 383 ggg 385 ||| Sbjct: 342 ggg 340
>gb|AY062543.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420; MXI10.14) mRNA, complete cds Length = 721 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || ||||||||||||||||||||||| || || ||||| || Sbjct: 449 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcgtccatcatagtatcc 390 Query: 383 ggg 385 ||| Sbjct: 389 ggg 387
>gb|AY062458.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420; MXI10.14) mRNA, complete cds Length = 720 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || ||||||||||||||||||||||| || || ||||| || Sbjct: 449 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcgtccatcatagtatcc 390 Query: 383 ggg 385 ||| Sbjct: 389 ggg 387
>gb|AY062437.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420; MXI10.14) mRNA, complete cds Length = 728 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || ||||||||||||||||||||||| || || ||||| || Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcgtccatcatagtatcc 394 Query: 383 ggg 385 ||| Sbjct: 393 ggg 391
>gb|AY059939.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420; MXI10.14) mRNA, complete cds Length = 758 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 323 gtcggtgcacccgaacataggcagcttccacattgtccagtatcggccgtcgtagtaccc 382 ||||||||| ||||||| || ||||||||||||||||||||||| || || ||||| || Sbjct: 449 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcgtccatcatagtatcc 390 Query: 383 ggg 385 ||| Sbjct: 389 ggg 387 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,290,596 Number of Sequences: 3902068 Number of extensions: 4290596 Number of successful extensions: 84892 Number of sequences better than 10.0: 406 Number of HSP's better than 10.0 without gapping: 405 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 83712 Number of HSP's gapped (non-prelim): 1079 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)