>ERBB3_PONPY (Q5RB22) Receptor tyrosine-protein kinase erbB-3 precursor (EC|
           2.7.10.1)
          Length = 1342

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
 Frame = -2

Query: 584 ERCHIFQTGRQQ------QTWSPNKTGWKTFS-LPTVSGLALFSMKMLQRIWA*I*LLKR 426
           E+ ++FQT R+       Q+W P+   +  FS L T+ G +L++      I      +K 
Sbjct: 382 EKLNVFQTVREITGYLNIQSWPPHMHNFSVFSNLTTIGGRSLYNRGFSLLI------MKN 435

Query: 425 NNVVEFFLLQNSCGFQMHRWRASGRILIGQRRMLMKKDSRNFSSIL 288
            NV        S GF+  +  ++GRI I   R L    S N++ +L
Sbjct: 436 LNVT-------SLGFRSLKEISAGRIYISANRQLCYHHSLNWTKVL 474

>ERBB3_HUMAN (P21860) Receptor tyrosine-protein kinase erbB-3 precursor (EC|
           2.7.10.1) (c-erbB3) (Tyrosine kinase-type cell surface
           receptor HER3)
          Length = 1342

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
 Frame = -2

Query: 584 ERCHIFQTGRQQ------QTWSPNKTGWKTFS-LPTVSGLALFSMKMLQRIWA*I*LLKR 426
           E+ ++F+T R+       Q+W P+   +  FS L T+ G +L++      I      +K 
Sbjct: 382 EKLNVFRTVREITGYLNIQSWPPHMHNFSVFSNLTTIGGRSLYNRGFSLLI------MKN 435

Query: 425 NNVVEFFLLQNSCGFQMHRWRASGRILIGQRRMLMKKDSRNFSSIL 288
            NV        S GF+  +  ++GRI I   R L    S N++ +L
Sbjct: 436 LNVT-------SLGFRSLKEISAGRIYISANRQLCYHHSLNWTKVL 474

>RNC_HUMAN (Q9NRR4) Ribonuclease III (EC 3.1.26.3) (RNase III) (Drosha) (p241)|
          Length = 1374

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
 Frame = +3

Query: 234 PSVSRQVKTILKPQRHPIQYGTKVPRILLHQHPPLSYQNASRSSPSVHLKTAAVLQQKEF 413
           PS+       + PQ+   QY    P    H  PP S+ N+ +++PS  L +A       F
Sbjct: 149 PSMPHPPPPPVMPQQVNYQYP---PGYSHHNFPPPSF-NSFQNNPSSFLPSANNSSSPHF 204

Query: 414 YHIVPF-----QELDLSPDPLQHF--HREQSQPGNRG*R 509
            H+ P+          SP+ L+H+  HR +     RG R
Sbjct: 205 RHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGER 243

>RL3_MYCCT (P10134) 50S ribosomal protein L3|
          Length = 223

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 21/83 (25%), Positives = 37/83 (44%)
 Frame = +3

Query: 201 ELTSMMIVVESPSVSRQVKTILKPQRHPIQYGTKVPRILLHQHPPLSYQNASRSSPSVHL 380
           +L  + +V   P+   QVKTI       +Q GT   R+ L   P L +   + S+P   +
Sbjct: 20  QLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNKPELGHFKKANSNPKRFV 79

Query: 381 KTAAVLQQKEFYHIVPFQELDLS 449
           K    +Q  E   ++   ++ +S
Sbjct: 80  KEIRNMQGYEIGQVINVSDIFVS 102

>OVO_DROME (P51521) Protein ovo (Protein shaven baby)|
          Length = 1351

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 23/81 (28%), Positives = 37/81 (45%)
 Frame = +3

Query: 246  RQVKTILKPQRHPIQYGTKVPRILLHQHPPLSYQNASRSSPSVHLKTAAVLQQKEFYHIV 425
            +Q  ++ + Q+H +Q    V +  + Q PP SYQ+A+R             QQ+      
Sbjct: 852  QQQHSVQQQQQHNVQQQHGVQQQHVQQQPPPSYQHATRGLMMQQQPQHGGYQQQAAIMSQ 911

Query: 426  PFQELDLSPDPLQHFHREQSQ 488
              Q+L LS    Q  H++Q Q
Sbjct: 912  QQQQL-LSQQQQQSHHQQQQQ 931

>ERBB4_RAT (Q62956) Receptor tyrosine-protein kinase erbB-4 precursor (EC|
           2.7.10.1)
          Length = 1308

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 7/44 (15%)
 Frame = -2

Query: 584 ERCHIFQTGRQQ------QTWSPNKTGWKTFS-LPTVSGLALFS 474
           E+ ++F+T R+       QTW PN T +  FS L T+ G  L+S
Sbjct: 387 EKLNVFRTVREITGFLNIQTWPPNMTDFSVFSNLVTIGGRVLYS 430

>ERBB3_RAT (Q62799) Receptor tyrosine-protein kinase erbB-3 precursor (EC|
           2.7.10.1) (c-erbB3)
          Length = 1339

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
 Frame = -2

Query: 584 ERCHIFQTGRQQ------QTWSPNKTGWKTFS-LPTVSGLALFSMKMLQRIWA*I*LLKR 426
           E+ ++F+T R+       Q+W P+   +  FS L T+ G +L++      I      +K 
Sbjct: 382 EKLNVFRTVREITGYLNIQSWPPHMHNFSVFSNLTTIGGRSLYNRGFSLLI------MKN 435

Query: 425 NNVVEFFLLQNSCGFQMHRWRASGRILIGQRRMLMKKDSRNFSSIL 288
            NV        S GF+  +  ++GR+ I   + L    S N++ +L
Sbjct: 436 LNVT-------SLGFRSLKEISAGRVYISANQQLCYHHSLNWTRLL 474

>ERBB3_MOUSE (Q61526) Receptor tyrosine-protein kinase erbB-3 precursor (EC|
           2.7.10.1) (c-erbB3) (Glial growth factor receptor)
          Length = 1339

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
 Frame = -2

Query: 584 ERCHIFQTGRQQ------QTWSPNKTGWKTFS-LPTVSGLALFSMKMLQRIWA*I*LLKR 426
           E+ ++F+T R+       Q+W P+   +  FS L T+ G +L++      I      +K 
Sbjct: 382 EKLNVFRTVREITGYLNIQSWPPHMHNFSVFSNLTTIGGRSLYNRGFSLLI------MKN 435

Query: 425 NNVVEFFLLQNSCGFQMHRWRASGRILIGQRRMLMKKDSRNFSSIL 288
            NV        S GF+  +  ++GR+ I   + L    S N++ +L
Sbjct: 436 LNVT-------SLGFRSLKEISAGRVYISANQQLCYHHSLNWTRLL 474


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,923,121
Number of Sequences: 219361
Number of extensions: 1987091
Number of successful extensions: 5269
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5269
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)