ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9o18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF040700.1|AF040700 Oryza sativa methionyl-tRNA synthetase mR... 571 e-159
2gb|BT024103.1| Zea mays clone EL01N0522A02 mRNA sequence 402 e-109
3gb|AY109485.1| Zea mays CL580_1 mRNA sequence 387 e-104
4gb|BT016446.1| Zea mays clone Contig279 mRNA sequence 381 e-102
5dbj|AK059433.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 216 7e-53
7dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic D... 216 7e-53
8emb|Z73427.1|CEF58B3 Caenorhabditis elegans Cosmid F58B3, comple... 58 4e-05
9ref|NM_069795.3| Caenorhabditis elegans Methionyl tRNA Synthetas... 58 4e-05
10ref|NM_001017050.2| Xenopus tropicalis hypothetical protein LOC5... 52 0.002
11gb|BC075609.1| Xenopus tropicalis hypothetical protein LOC549804... 52 0.002
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.14
13gb|AC140477.2| Mus musculus BAC clone RP24-132G6 from chromosome... 46 0.14
14gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.14
15ref|XM_623124.1| PREDICTED: Apis mellifera similar to GA18259-PA... 46 0.14
16ref|XM_397348.2| PREDICTED: Apis mellifera similar to GA18259-PA... 46 0.14
17dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
18gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.14
19gb|BT013704.1| Lycopersicon esculentum clone 132546F, mRNA sequence 44 0.57
20gb|AC135100.12| Medicago truncatula clone mth2-17j9, complete se... 44 0.57
21gb|AY827106.2| Azospirillum brasilense strain Yu62 flagellar gen... 44 0.57
22dbj|AP005210.2| Homo sapiens genomic DNA, chromosome 18, clone:R... 44 0.57
23gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
24gb|AC138110.3| Mus musculus BAC clone RP24-363O16 from chromosom... 42 2.3
25gb|AC146791.12| Medicago truncatula clone mth2-123m17, complete ... 42 2.3
26ref|XM_962902.1| PREDICTED: Tribolium castaneum similar to CG491... 42 2.3
27gb|AC079232.7| Homo sapiens BAC clone RP11-360H22 from 4, comple... 42 2.3
28dbj|AK086228.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 42 2.3
29dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
30dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
31dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
32ref|XM_214620.3| PREDICTED: Rattus norvegicus similar to Retinob... 42 2.3
33ref|XM_573473.1| PREDICTED: Rattus norvegicus similar to Rbbp8 p... 42 2.3
34gb|AC008786.6|AC008786 Homo sapiens chromosome 5 clone CTD-2037L... 42 2.3
35gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
36gb|AC140327.3| Mus musculus BAC clone RP24-325P20 from 6, comple... 42 2.3
37gb|AC131655.4| Mus musculus BAC clone RP23-233G16 from 8, comple... 42 2.3
38gb|AC116671.14| Mus musculus chromosome 3, clone RP23-111L16, co... 40 8.9
39gb|BC077873.1| Xenopus laevis MGC80621 protein, mRNA (cDNA clone... 40 8.9
40gb|AY366501.1| Homo sapiens clone BAC44d21 BCSC-1 (LOH11CR2A) ge... 40 8.9
41emb|AL157786.13| Human DNA sequence from clone RP11-324O2 on chr... 40 8.9
42gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 8.9
43emb|CR378667.1| Photobacterium profundum SS9; segment 5/12 40 8.9
44emb|BX571659.1| Wolinella succinogenes, complete genome; segment... 40 8.9
45gb|AC159892.2| Mus musculus BAC clone RP23-313P23 from chromosom... 40 8.9
46gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, co... 40 8.9
47gb|AC069529.22| Homo sapiens 3 BAC RP11-332I3 (Roswell Park Canc... 40 8.9
48gb|AC093891.3| Homo sapiens BAC clone RP11-691E1 from 4, complet... 40 8.9
49gb|AC161171.5| Mus musculus chromosome 3, clone RP24-326F21, com... 40 8.9
50gb|AC016603.6| Homo sapiens chromosome 5 clone CTD-2132G23, comp... 40 8.9
51ref|XM_395854.2| PREDICTED: Apis mellifera similar to CG2991-PB,... 40 8.9
52ref|XM_623086.1| PREDICTED: Apis mellifera similar to CG2991-PB,... 40 8.9
53gb|AC154331.1| Mus musculus BAC clone RP23-256F11 from chromosom... 40 8.9
54gb|AC020754.4|AC020754 Homo sapiens chromosome 3 clone RP11-37I4... 40 8.9
55gb|AC010359.5|AC010359 Homo sapiens chromosome 5 clone CTD-2033C... 40 8.9
56gb|AC074096.8| Homo sapiens BAC clone RP11-328L16 from 2, comple... 40 8.9
57gb|AC007823.38| Homo sapiens 3 BAC RP11-255C15 (Roswell Park Can... 40 8.9
58emb|BX005158.8| Zebrafish DNA sequence from clone DKEY-222N6 in ... 40 8.9
59gb|AC155928.2| Mus musculus BAC clone RP24-70N20 from 9, complet... 40 8.9
60gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 8.9
61emb|CR790372.10| Zebrafish DNA sequence from clone DKEY-70K13 in... 40 8.9
62gb|AC004701.1|AC004701 Homo sapiens chromosome 4 clone B331M8 ma... 40 8.9
63gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 8.9
64gb|AC113087.11| Mus musculus chromosome 14, clone RP23-293A2, co... 40 8.9
65dbj|AP001884.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.9
66dbj|AP002407.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.9
67gb|BC084924.1| Xenopus laevis hypothetical LOC495415, mRNA (cDNA... 40 8.9
68gb|AC087727.35| Mus musculus strain C57BL/6J chromosome 2 clone ... 40 8.9
69gb|AC090955.3| Homo sapiens chromosome 3 clone RP11-622A14 map 3... 40 8.9
70emb|AL772215.8| Mouse DNA sequence from clone RP23-114N20 on chr... 40 8.9
71gb|AC021999.5| Homo sapiens chromosome 3 clone RP11-129J10 map 3... 40 8.9 
>gb|AF040700.1|AF040700 Oryza sativa methionyl-tRNA synthetase mRNA, complete cds
          Length = 2850

 Score =  571 bits (288), Expect = e-159
 Identities = 479/542 (88%), Gaps = 3/542 (0%)
 Strand = Plus / Minus

                                                                        
Query: 101  ctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagttgtgaa 160
            |||||||||  | ||| ||||||||| ||| |||||||| |||||||| |||||||||||
Sbjct: 2458 ctagcgaatttctccactcgctatcgacttcaccttgcaaactccagctgaagttgtgaa 2399

                                                                        
Query: 161  tggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagataactt 220
             || ||||| ||||| |||||||| |||||||||||||||||||| || || |||| |||
Sbjct: 2398 gggtacatccttgtagcacgccacgagctcgccgttgctgtgcaggtcagctgatagctt 2339

                                                                        
Query: 221  ctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccggcaaa 280
            |||||| || ||||| || ||||||||||| ||||| ||||| |||||  |||| |||||
Sbjct: 2338 ctcccacgtcttgctctttgcgttgagagacgcctcaggctctccagagtacccagcaaa 2279

                                                                        
Query: 281  ggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaacctttgtatg 340
            |||||||||||||||||| || ||||||||||| |||||||||| |||||||||||||||
Sbjct: 2278 ggtcaccctctccccaaccgctgcggattctggtggctcaaccagctcaacctttgtatg 2219

                                                                        
Query: 341  gtcctcatttgatgccgccaaaaccatagcatgtgattttataccgcgcattgccaccgg 400
            ||||||||||||||| |||| |||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 2218 gtcctcatttgatgcagccagaaccattgcatgtgattttataccgcgcatcgccactgg 2159

                                                                        
Query: 401  tttaagattgcagagcacacacactttccggttctgcatttcttcaagagggatgaattt 460
            ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2158 tttcagattgcagagaacacacactttccggttctgcatttcttcaagagggatgaattt 2099

                                                                        
Query: 461  gacaaggccgctaaccactgttcttggtgcctcttctccaacatcgatctcttctacgta 520
            ||||||||||||||| |||||||||||||| || ||||||||||| ||||| ||||| ||
Sbjct: 2098 gacaaggccgctaacaactgttcttggtgcttcctctccaacatcaatctcctctacata 2039

                                                                        
Query: 521  aagtgaatcagcatctggatgcttctccgcttttctgataagccctacccgaatatccag 580
             || ||||||||||||||||||||||  ||||| ||||||||||| || |||||||||| 
Sbjct: 2038 cagcgaatcagcatctggatgcttctgtgctttcctgataagccccactcgaatatccaa 1979

                                                                        
Query: 581  cttggcaactgagacat---cctctgaagtctttgattttgaaccaccagattgtttctt 637
            ||| || || | |||||   |||||| | ||||||||||||||||||| |||||||| ||
Sbjct: 1978 ctttgccaccgtgacatccacctctgcattctttgattttgaaccacctgattgtttttt 1919

              
Query: 638  ct 639
            ||
Sbjct: 1918 ct 1917
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>gb|BT024103.1| Zea mays clone EL01N0522A02 mRNA sequence
          Length = 1706

 Score =  402 bits (203), Expect = e-109
 Identities = 457/541 (84%), Gaps = 3/541 (0%)
 Strand = Plus / Minus

                                                                        
Query: 101  ctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagttgtgaa 160
            |||||||||| | || |||||||| ||||| ||| |||| ||||||||||| || |||||
Sbjct: 1396 ctagcgaatctctccgttcgctattgtcttcaccctgcagactccagccgaggtagtgaa 1337

                                                                        
Query: 161  tggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagataactt 220
             || |||||| |||| |||||||| ||||| |||||||||||||  ||||| |  | |||
Sbjct: 1336 gggcacatctctgtagcacgccaccagctcaccgttgctgtgcaactcggcggccagctt 1277

                                                                        
Query: 221  ctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccggcaaa 280
            |||||| || ||||| ||| |  |||| || |||||||||||||| |   |||| |||||
Sbjct: 1276 ctcccacgtcttgctcttgccactgagggaagcctcgggctcacccgcgtacccagcaaa 1217

                                                                        
Query: 281  ggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaacctttgtatg 340
            ||| || | |||||| |||||||| || |||||||| || |||||||||||||| || ||
Sbjct: 1216 ggtaacacgctcccccacagcagcagactctggaggttccaccaactcaaccttcgtgtg 1157

                                                                        
Query: 341  gtcctcatttgatgccgccaaaaccatagcatgtgattttataccgcgcattgccaccgg 400
            ||||||||| ||||| |||| |||||| |||||||||||||| || ||||||||||||||
Sbjct: 1156 gtcctcattcgatgcagccagaaccattgcatgtgattttatgccacgcattgccaccgg 1097

                                                                        
Query: 401  tttaagattgcagagcacacacactttccggttctgcatttcttcaagagggatgaattt 460
            ||| |||||||||||||| || ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 1096 tttcagattgcagagcacgcaaactttccggctctgcatttcttcaagaggtatgaattt 1037

                                                                        
Query: 461  gacaaggccgctaaccactgttcttggtgcctcttctccaacatcgatctcttctacgta 520
             |||||||| || || |||||||| || || || ||||||||||| ||||| || |||||
Sbjct: 1036 aacaaggccactgactactgttctcggcgcgtcctctccaacatcaatctcctccacgta 977

                                                                        
Query: 521  aagtgaatcagcatctggatgcttctccgcttttctgataagccctacccgaatatccag 580
            ||| ||||||||||||||||||||||| ||||||||||||||||| || | |||||||| 
Sbjct: 976  aagggaatcagcatctggatgcttctctgcttttctgataagccccactctaatatccaa 917

                                                                        
Query: 581  cttggcaactg---agacatcctctgaagtctttgattttgaaccaccagattgtttctt 637
            ||| |||||||    | || |||| |  ||||| |||||||| |||||||||||||||||
Sbjct: 916  ctttgcaactgtaatgtcagcctcagctgtcttcgattttgagccaccagattgtttctt 857

             
Query: 638  c 638
            |
Sbjct: 856  c 856
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>gb|AY109485.1| Zea mays CL580_1 mRNA sequence
          Length = 2647

 Score =  387 bits (195), Expect = e-104
 Identities = 417/491 (84%)
 Strand = Plus / Minus

                                                                        
Query: 101  ctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagttgtgaa 160
            |||||||||| | || |||||||| ||||| ||| |||| ||||||||||| || |||||
Sbjct: 2355 ctagcgaatctctccgttcgctattgtcttcaccctgcagactccagccgaggtagtgaa 2296

                                                                        
Query: 161  tggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagataactt 220
             || |||||| |||| |||||||| ||||| |||||||||||||  ||||| |  | |||
Sbjct: 2295 gggcacatctctgtagcacgccaccagctcaccgttgctgtgcaactcggcggccagctt 2236

                                                                        
Query: 221  ctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccggcaaa 280
            |||||| || ||||| ||| |  |||| || |||||||||||||| |   |||| |||||
Sbjct: 2235 ctcccacgtcttgctcttgccactgagggaagcctcgggctcacccgcgtacccagcaaa 2176

                                                                        
Query: 281  ggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaacctttgtatg 340
            ||| || | ||| || |||||||| || |||||||| || |||||||||||||| || ||
Sbjct: 2175 ggtaacacgctcgcccacagcagcagactctggaggttccaccaactcaaccttcgtgtg 2116

                                                                        
Query: 341  gtcctcatttgatgccgccaaaaccatagcatgtgattttataccgcgcattgccaccgg 400
            ||||||||| ||||| |||| |||||| |||||||||||||| || ||||||||||||||
Sbjct: 2115 gtcctcattcgatgcagccagaaccattgcatgtgattttatgccacgcattgccaccgg 2056

                                                                        
Query: 401  tttaagattgcagagcacacacactttccggttctgcatttcttcaagagggatgaattt 460
            ||| |||||||||||||| || ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 2055 tttcagattgcagagcacgcaaactttccggctctgcatttcttcaagaggtatgaattt 1996

                                                                        
Query: 461  gacaaggccgctaaccactgttcttggtgcctcttctccaacatcgatctcttctacgta 520
             |||||||| || || |||||||| || || || ||||||||||| ||||| || |||||
Sbjct: 1995 aacaaggccactgactactgttctcggcgcgtcctctccaacatcaatctcctccacgta 1936

                                                                        
Query: 521  aagtgaatcagcatctggatgcttctccgcttttctgataagccctacccgaatatccag 580
            ||| ||||||||||||||||||||||| ||||||||||||||||| || | |||||||| 
Sbjct: 1935 aagggaatcagcatctggatgcttctctgcttttctgataagccccactctaatatccaa 1876

                       
Query: 581  cttggcaactg 591
            ||| |||||||
Sbjct: 1875 ctttgcaactg 1865
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>gb|BT016446.1| Zea mays clone Contig279 mRNA sequence
          Length = 1192

 Score =  381 bits (192), Expect = e-102
 Identities = 411/484 (84%)
 Strand = Plus / Minus

                                                                       
Query: 96  tgtgcctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagtt 155
           ||||||||||||||| | || || | ||| |||||||||||||| | ||||||||| |||
Sbjct: 978 tgtgcctagcgaatctctccgtttggtattgtcttgaccttgcagattccagccgaggtt 919

                                                                       
Query: 156 gtgaatggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagat 215
           ||||| || ||||||||||| |||||||| ||||| ||||| |||||||| ||||| |  
Sbjct: 918 gtgaagggcacatctttgtagcacgccacgagctcaccgttactgtgcagctcggcgggc 859

                                                                       
Query: 216 aacttctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccg 275
           | ||||||||| || ||||| ||| |  |||| || ||||| ||||| || ||  |||| 
Sbjct: 858 agcttctcccacgtcttgctcttgccactgagggaagcctcaggctcccccgagtaccca 799

                                                                       
Query: 276 gcaaaggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaaccttt 335
           |||||||| || | ||| || || ||||| ||||| || ||||| |||||||||||||| 
Sbjct: 798 gcaaaggtaacacgctcgcccacggcagcagattcgggtggctccaccaactcaaccttc 739

                                                                       
Query: 336 gtatggtcctcatttgatgccgccaaaaccatagcatgtgattttataccgcgcattgcc 395
           || ||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 738 gtgtggtcctcattcgatgcagccaaaaccattgcatgtgattttataccacgcattgcc 679

                                                                       
Query: 396 accggtttaagattgcagagcacacacactttccggttctgcatttcttcaagagggatg 455
           || ||||| ||||||||||| || || ||||||||||||||||||||||| ||||| |||
Sbjct: 678 acaggtttcagattgcagagtacgcaaactttccggttctgcatttcttcgagaggtatg 619

                                                                       
Query: 456 aatttgacaaggccgctaaccactgttcttggtgcctcttctccaacatcgatctcttct 515
           |||||||| ||||| || ||||||||||||||||  || ||||||||||| ||||| || 
Sbjct: 618 aatttgacgaggccactgaccactgttcttggtgtgtcctctccaacatcaatctcctcc 559

                                                                       
Query: 516 acgtaaagtgaatcagcatctggatgcttctccgcttttctgataagccctacccgaata 575
           |||||||| ||||||||||||||||||||||| ||||| |||||||| || || | ||||
Sbjct: 558 acgtaaagggaatcagcatctggatgcttctctgctttcctgataaggcccactctaata 499

               
Query: 576 tcca 579
           ||||
Sbjct: 498 tcca 495



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 606 gtctttgattttgaaccaccagattgtttctt 637
           ||||| ||||| ||||||||||||||||||||
Sbjct: 465 gtcttcgatttcgaaccaccagattgtttctt 434
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>dbj|AK059433.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F07, full
           insert sequence
          Length = 376

 Score =  272 bits (137), Expect = 1e-69
 Identities = 239/273 (87%)
 Strand = Plus / Minus

                                                                       
Query: 101 ctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagttgtgaa 160
           |||||||||  | ||| ||||||||| ||| |||||||| |||||||| |||||||||||
Sbjct: 273 ctagcgaatttctccactcgctatcgacttcaccttgcaaactccagctgaagttgtgaa 214

                                                                       
Query: 161 tggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagataactt 220
            || ||||| ||||| |||||||| |||||||||||||||||||| || || |||| |||
Sbjct: 213 gggtacatccttgtagcacgccacgagctcgccgttgctgtgcaggtcagctgatagctt 154

                                                                       
Query: 221 ctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccggcaaa 280
           |||||| || ||||| || ||||||||||| ||||| ||||| |||||  |||| |||||
Sbjct: 153 ctcccacgtcttgctctttgcgttgagagacgcctcaggctctccagagtacccagcaaa 94

                                                                       
Query: 281 ggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaacctttgtatg 340
           |||||||||||||||||| || ||||||||||| |||||||||| |||||||||||||||
Sbjct: 93  ggtcaccctctccccaaccgctgcggattctggtggctcaaccagctcaacctttgtatg 34

                                            
Query: 341 gtcctcatttgatgccgccaaaaccatagcatg 373
           ||||||||||||||| |||| |||||| |||||
Sbjct: 33  gtcctcatttgatgcagccagaaccattgcatg 1
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  216 bits (109), Expect = 7e-53
 Identities = 202/233 (86%)
 Strand = Plus / Plus

                                                                            
Query: 101      ctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagttgtgaa 160
                |||||||||  | ||| ||||||||| ||| |||||||| |||||||| |||||||||||
Sbjct: 17927753 ctagcgaatttctccactcgctatcgacttcaccttgcaaactccagctgaagttgtgaa 17927812

                                                                            
Query: 161      tggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagataactt 220
                 || ||||| ||||| |||||||| |||||||||||||||||||| || || |||| |||
Sbjct: 17927813 gggtacatccttgtagcacgccacgagctcgccgttgctgtgcaggtcagctgatagctt 17927872

                                                                            
Query: 221      ctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccggcaaa 280
                |||||| || ||||| || ||||||||||| ||||| ||||| |||||  |||| |||||
Sbjct: 17927873 ctcccacgtcttgctctttgcgttgagagacgcctcaggctctccagagtacccagcaaa 17927932

                                                                     
Query: 281      ggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaacct 333
                |||||||||||||||||| || ||||||||||| |||||||||| ||||||||
Sbjct: 17927933 ggtcaccctctccccaaccgctgcggattctggtggctcaaccagctcaacct 17927985



 Score =  212 bits (107), Expect = 1e-51
 Identities = 184/209 (88%), Gaps = 3/209 (1%)
 Strand = Plus / Plus

                                                                            
Query: 434      ctgcatttcttcaagagggatgaatttgacaaggccgctaaccactgttcttggtgcctc 493
                |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 17928273 ctgcatttcttcaagagggatgaatttgacaaggccgctaacaactgttcttggtgcttc 17928332

                                                                            
Query: 494      ttctccaacatcgatctcttctacgtaaagtgaatcagcatctggatgcttctccgcttt 553
                 ||||||||||| ||||| ||||| || || ||||||||||||||||||||||  |||||
Sbjct: 17928333 ctctccaacatcaatctcctctacatacagcgaatcagcatctggatgcttctgtgcttt 17928392

                                                                            
Query: 554      tctgataagccctacccgaatatccagcttggcaactgagacat---cctctgaagtctt 610
                 ||||||||||| || |||||||||| ||| || || | |||||   |||||| | ||||
Sbjct: 17928393 cctgataagccccactcgaatatccaactttgccaccgtgacatccacctctgcattctt 17928452

                                             
Query: 611      tgattttgaaccaccagattgtttcttct 639
                ||||||||||||||| |||||||| ||||
Sbjct: 17928453 tgattttgaaccacctgattgttttttct 17928481



 Score =  157 bits (79), Expect = 6e-35
 Identities = 100/107 (93%)
 Strand = Plus / Plus

                                                                            
Query: 330      acctttgtatggtcctcatttgatgccgccaaaaccatagcatgtgattttataccgcgc 389
                |||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||
Sbjct: 17928075 acctttgtatggtcctcatttgatgcagccagaaccattgcatgtgattttataccgcgc 17928134

                                                               
Query: 390      attgccaccggtttaagattgcagagcacacacactttccggttctg 436
                || ||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 17928135 atcgccactggtttcagattgcagagaacacacactttccggttctg 17928181
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>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0561B08
          Length = 161083

 Score =  216 bits (109), Expect = 7e-53
 Identities = 202/233 (86%)
 Strand = Plus / Plus

                                                                          
Query: 101    ctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagttgtgaa 160
              |||||||||  | ||| ||||||||| ||| |||||||| |||||||| |||||||||||
Sbjct: 132942 ctagcgaatttctccactcgctatcgacttcaccttgcaaactccagctgaagttgtgaa 133001

                                                                          
Query: 161    tggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagataactt 220
               || ||||| ||||| |||||||| |||||||||||||||||||| || || |||| |||
Sbjct: 133002 gggtacatccttgtagcacgccacgagctcgccgttgctgtgcaggtcagctgatagctt 133061

                                                                          
Query: 221    ctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccggcaaa 280
              |||||| || ||||| || ||||||||||| ||||| ||||| |||||  |||| |||||
Sbjct: 133062 ctcccacgtcttgctctttgcgttgagagacgcctcaggctctccagagtacccagcaaa 133121

                                                                   
Query: 281    ggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaacct 333
              |||||||||||||||||| || ||||||||||| |||||||||| ||||||||
Sbjct: 133122 ggtcaccctctccccaaccgctgcggattctggtggctcaaccagctcaacct 133174



 Score =  212 bits (107), Expect = 1e-51
 Identities = 184/209 (88%), Gaps = 3/209 (1%)
 Strand = Plus / Plus

                                                                          
Query: 434    ctgcatttcttcaagagggatgaatttgacaaggccgctaaccactgttcttggtgcctc 493
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 133462 ctgcatttcttcaagagggatgaatttgacaaggccgctaacaactgttcttggtgcttc 133521

                                                                          
Query: 494    ttctccaacatcgatctcttctacgtaaagtgaatcagcatctggatgcttctccgcttt 553
               ||||||||||| ||||| ||||| || || ||||||||||||||||||||||  |||||
Sbjct: 133522 ctctccaacatcaatctcctctacatacagcgaatcagcatctggatgcttctgtgcttt 133581

                                                                          
Query: 554    tctgataagccctacccgaatatccagcttggcaactgagacat---cctctgaagtctt 610
               ||||||||||| || |||||||||| ||| || || | |||||   |||||| | ||||
Sbjct: 133582 cctgataagccccactcgaatatccaactttgccaccgtgacatccacctctgcattctt 133641

                                           
Query: 611    tgattttgaaccaccagattgtttcttct 639
              ||||||||||||||| |||||||| ||||
Sbjct: 133642 tgattttgaaccacctgattgttttttct 133670



 Score =  157 bits (79), Expect = 6e-35
 Identities = 100/107 (93%)
 Strand = Plus / Plus

                                                                          
Query: 330    acctttgtatggtcctcatttgatgccgccaaaaccatagcatgtgattttataccgcgc 389
              |||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||
Sbjct: 133264 acctttgtatggtcctcatttgatgcagccagaaccattgcatgtgattttataccgcgc 133323

                                                             
Query: 390    attgccaccggtttaagattgcagagcacacacactttccggttctg 436
              || ||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 133324 atcgccactggtttcagattgcagagaacacacactttccggttctg 133370
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>emb|Z73427.1|CEF58B3 Caenorhabditis elegans Cosmid F58B3, complete sequence
          Length = 21948

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 495   tctccaacatcgatctcttctacgtaaagtgaatcagcatctggatgcttctc 547
             |||||||||||||||| ||| |||||||| | ||| ||||| |||||||||||
Sbjct: 13682 tctccaacatcgatctgttccacgtaaagagcatctgcatcaggatgcttctc 13734
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>ref|NM_069795.3| Caenorhabditis elegans Methionyl tRNA Synthetase family member
            (mrs-1) (mrs-1) mRNA, complete cds
          Length = 2986

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 495  tctccaacatcgatctcttctacgtaaagtgaatcagcatctggatgcttctc 547
            |||||||||||||||| ||| |||||||| | ||| ||||| |||||||||||
Sbjct: 2378 tctccaacatcgatctgttccacgtaaagagcatctgcatcaggatgcttctc 2326
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>ref|NM_001017050.2| Xenopus tropicalis hypothetical protein LOC549804 (LOC549804), mRNA
          Length = 1118

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 493 cttctccaacatcgatctcttctacgtaaagtgaatcagcatctggatgcttct 546
           ||||||| ||||| | |||||||||||| || || |||||||| ||||||||||
Sbjct: 618 cttctcctacatctacctcttctacgtacagggagtcagcatcaggatgcttct 565
to top
>gb|BC075609.1| Xenopus tropicalis hypothetical protein LOC549804, mRNA (cDNA clone
           IMAGE:7000370)
          Length = 1118

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 493 cttctccaacatcgatctcttctacgtaaagtgaatcagcatctggatgcttct 546
           ||||||| ||||| | |||||||||||| || || |||||||| ||||||||||
Sbjct: 618 cttctcctacatctacctcttctacgtacagggagtcagcatcaggatgcttct 565
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 607     tctttgattttgaaccaccagattgtt 633
               ||||| |||||||||||||||||||||
Sbjct: 6040928 tctttaattttgaaccaccagattgtt 6040954
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>gb|AC140477.2| Mus musculus BAC clone RP24-132G6 from chromosome 12, complete sequence
          Length = 185642

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 473    aaccactgttcttggtgcctcttctcc 499
              |||||||||||||||| ||||||||||
Sbjct: 104872 aaccactgttcttggtacctcttctcc 104898
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>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08,
             complete sequence
          Length = 111961

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 607   tctttgattttgaaccaccagattgtt 633
             ||||| |||||||||||||||||||||
Sbjct: 99463 tctttaattttgaaccaccagattgtt 99489
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>ref|XM_623124.1| PREDICTED: Apis mellifera similar to GA18259-PA (LOC413909), mRNA
          Length = 1944

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 493  cttctccaacatcgatctcttctacgtaaagtgaatcagcatc 535
            ||||||||| ||| || | |||||| |||||||||||||||||
Sbjct: 1355 cttctccaagatcaattttttctacataaagtgaatcagcatc 1313
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>ref|XM_397348.2| PREDICTED: Apis mellifera similar to GA18259-PA (LOC413909), mRNA
          Length = 1882

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 493  cttctccaacatcgatctcttctacgtaaagtgaatcagcatc 535
            ||||||||| ||| || | |||||| |||||||||||||||||
Sbjct: 1293 cttctccaagatcaattttttctacataaagtgaatcagcatc 1251
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 607     tctttgattttgaaccaccagattgtt 633
               ||||| |||||||||||||||||||||
Sbjct: 6040141 tctttaattttgaaccaccagattgtt 6040167
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>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0090D11, complete sequence
          Length = 174865

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 607   tctttgattttgaaccaccagattgtt 633
             ||||| |||||||||||||||||||||
Sbjct: 34404 tctttaattttgaaccaccagattgtt 34430
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>gb|BT013704.1| Lycopersicon esculentum clone 132546F, mRNA sequence
          Length = 2678

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 493  cttctccaacatcgatctcttctacgtaaagtgaatcagcatctggatgcttct 546
            |||| |||||||| |||||||| || || |  ||||||||||| ||||||||||
Sbjct: 2116 cttcaccaacatcaatctcttcaacatacaaagaatcagcatcgggatgcttct 2063
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>gb|AC135100.12| Medicago truncatula clone mth2-17j9, complete sequence
          Length = 113967

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                         
Query: 492   tcttctccaacatcgatctcttctacgtaaagtgaatcagcatctggatgcttctccgct 551
             ||||| |||||||| |||||||| | ||| |  ||||||||||| |||||||| || || 
Sbjct: 61873 tcttcaccaacatcaatctcttcaatgtataacgaatcagcatcaggatgcttttcagcc 61814

                                       
Query: 552   tttctgataagccctacccgaatatc 577
             ||| | || || || |||||||||||
Sbjct: 61813 ttttttatgagaccaacccgaatatc 61788
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>gb|AY827106.2| Azospirillum brasilense strain Yu62 flagellar gene cluster,
           complete sequence
          Length = 10431

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 624 ccagattgtttcttctttgaac 645
           ||||||||||||||||||||||
Sbjct: 360 ccagattgtttcttctttgaac 339
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>dbj|AP005210.2| Homo sapiens genomic DNA, chromosome 18, clone:RP11-146G7, complete
              sequence
          Length = 180737

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 14     aaattttaaaaaacagagtaaatagt 39
              |||||||||||| |||||||||||||
Sbjct: 107431 aaattttaaaaatcagagtaaatagt 107456
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>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0076K20, complete sequence
          Length = 127338

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 17    ttttaaaaaacagagtaaatagtaa 41
             |||||||||||||||||||| ||||
Sbjct: 79830 ttttaaaaaacagagtaaattgtaa 79806
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>gb|AC138110.3| Mus musculus BAC clone RP24-363O16 from chromosome 1, complete sequence
          Length = 158654

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 32     taaatagtaatattaacttcc 52
              |||||||||||||||||||||
Sbjct: 133172 taaatagtaatattaacttcc 133192
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>gb|AC146791.12| Medicago truncatula clone mth2-123m17, complete sequence
          Length = 130971

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 630   tgtttcttctttgaacttccc 650
             |||||||||||||||||||||
Sbjct: 44634 tgtttcttctttgaacttccc 44654
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>ref|XM_962902.1| PREDICTED: Tribolium castaneum similar to CG4911-PA (LOC656364),
           mRNA
          Length = 1410

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 597 tcctctgaagtctttgatttt 617
           |||||||||||||||||||||
Sbjct: 68  tcctctgaagtctttgatttt 48
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>gb|AC079232.7| Homo sapiens BAC clone RP11-360H22 from 4, complete sequence
          Length = 169281

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 437    catttcttcaagagggatgaa 457
              |||||||||||||||||||||
Sbjct: 125404 catttcttcaagagggatgaa 125424
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>dbj|AK086228.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930015B20 product:unclassifiable, full
           insert sequence
          Length = 2436

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 404 aagattgcagagcacacacac 424
           |||||||||||||||||||||
Sbjct: 53  aagattgcagagcacacacac 73
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 17      ttttaaaaaacagagtaaatagtaa 41
               |||||||||||||||||||| ||||
Sbjct: 2646968 ttttaaaaaacagagtaaattgtaa 2646992
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 17       ttttaaaaaacagagtaaatagtaa 41
                |||||||||||| ||||||||||||
Sbjct: 19503221 ttttaaaaaacatagtaaatagtaa 19503197
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>dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0086A10
          Length = 151071

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 17     ttttaaaaaacagagtaaatagtaa 41
              |||||||||||| ||||||||||||
Sbjct: 112037 ttttaaaaaacatagtaaatagtaa 112013
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>ref|XM_214620.3| PREDICTED: Rattus norvegicus similar to Retinoblastoma-binding
            protein 8 (RBBP-8) (CtBP interacting protein) (CtIP)
            (Retinoblastoma-interacting protein and myosin-like)
            (RIM) (predicted) (LOC291787), mRNA
          Length = 2840

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 209  ggcagataacttctcccaggt 229
            |||||||||||||||||||||
Sbjct: 2236 ggcagataacttctcccaggt 2256
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>ref|XM_573473.1| PREDICTED: Rattus norvegicus similar to Rbbp8 protein (LOC498249),
           mRNA
          Length = 776

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 209 ggcagataacttctcccaggt 229
           |||||||||||||||||||||
Sbjct: 111 ggcagataacttctcccaggt 131
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>gb|AC008786.6|AC008786 Homo sapiens chromosome 5 clone CTD-2037L6, complete sequence
          Length = 177472

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 404    aagattgcagagcacacacac 424
              |||||||||||||||||||||
Sbjct: 131061 aagattgcagagcacacacac 131081
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 17      ttttaaaaaacagagtaaatagtaa 41
               |||||||||||||||||||| ||||
Sbjct: 2655999 ttttaaaaaacagagtaaattgtaa 2656023
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>gb|AC140327.3| Mus musculus BAC clone RP24-325P20 from 6, complete sequence
          Length = 154692

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 526   aatcagcatctggatgcttct 546
             |||||||||||||||||||||
Sbjct: 59752 aatcagcatctggatgcttct 59772
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>gb|AC131655.4| Mus musculus BAC clone RP23-233G16 from 8, complete sequence
          Length = 190990

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 404   aagattgcagagcacacacac 424
             |||||||||||||||||||||
Sbjct: 93917 aagattgcagagcacacacac 93937
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>gb|AC116671.14| Mus musculus chromosome 3, clone RP23-111L16, complete sequence
          Length = 207768

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 8      attgtnaaattttaaaaaacaga 30
              ||||| |||||||||||||||||
Sbjct: 163220 attgtgaaattttaaaaaacaga 163242
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>gb|BC077873.1| Xenopus laevis MGC80621 protein, mRNA (cDNA clone MGC:80621
           IMAGE:5506197), complete cds
          Length = 3360

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 ttgctgtgcagatcggcaga 214
           ||||||||||||||||||||
Sbjct: 254 ttgctgtgcagatcggcaga 235
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>gb|AY366501.1| Homo sapiens clone BAC44d21 BCSC-1 (LOH11CR2A) gene, complete cds;
              alternatively spliced isoforms
          Length = 219836

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 37     agtaatattaacttccaatgaaat 60
              ||||| ||||||||||||||||||
Sbjct: 197740 agtaaaattaacttccaatgaaat 197717
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>emb|AL157786.13| Human DNA sequence from clone RP11-324O2 on chromosome 10 Contains a
              guanylate cyclase type protein pseudogene, the 5' end of
              the FACL5 for long-chain 5 fatty-acid-Coenzyme A ligase, a
              novel gene, the 3' end of a novel gene and a CpG island,
              complete sequence
          Length = 122591

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    tgaatggaacatctttgtaa 176
              ||||||||||||||||||||
Sbjct: 119134 tgaatggaacatctttgtaa 119153
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 618    gaaccaccagattgtttctt 637
              ||||||||||||||||||||
Sbjct: 886325 gaaccaccagattgtttctt 886306
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>emb|CR378667.1| Photobacterium profundum SS9; segment 5/12
          Length = 349080

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 618  gaaccaccagattgtttctt 637
            ||||||||||||||||||||
Sbjct: 5398 gaaccaccagattgtttctt 5417
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>emb|BX571659.1| Wolinella succinogenes, complete genome; segment 3/7
          Length = 349970

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     aattttaaaaaacagagtaa 34
              ||||||||||||||||||||
Sbjct: 282335 aattttaaaaaacagagtaa 282354
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>gb|AC159892.2| Mus musculus BAC clone RP23-313P23 from chromosome 9, complete sequence
          Length = 199351

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   caaaaccatagcatgtgatt 378
             ||||||||||||||||||||
Sbjct: 39219 caaaaccatagcatgtgatt 39200
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>gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, complete sequence
          Length = 159617

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   tgaatggaacatctttgtaa 176
             ||||||||||||||||||||
Sbjct: 14911 tgaatggaacatctttgtaa 14930
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>gb|AC069529.22| Homo sapiens 3 BAC RP11-332I3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 173202

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   cagataacttctcccaggtt 230
             ||||||||||||||||||||
Sbjct: 29527 cagataacttctcccaggtt 29508
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>gb|AC093891.3| Homo sapiens BAC clone RP11-691E1 from 4, complete sequence
          Length = 95771

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 600  tctgaagtctttgattttga 619
            ||||||||||||||||||||
Sbjct: 9677 tctgaagtctttgattttga 9696
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>gb|AC161171.5| Mus musculus chromosome 3, clone RP24-326F21, complete sequence
          Length = 153637

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 8     attgtnaaattttaaaaaacaga 30
             ||||| |||||||||||||||||
Sbjct: 88782 attgtgaaattttaaaaaacaga 88760
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>gb|AC016603.6| Homo sapiens chromosome 5 clone CTD-2132G23, complete sequence
          Length = 110879

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   catagcatgtgattttatac 384
             ||||||||||||||||||||
Sbjct: 36207 catagcatgtgattttatac 36226
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>ref|XM_395854.2| PREDICTED: Apis mellifera similar to CG2991-PB, isoform B
            (LOC412397), mRNA
          Length = 2165

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   taaatagtaatattaacttc 51
            ||||||||||||||||||||
Sbjct: 2108 taaatagtaatattaacttc 2089
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>ref|XM_623086.1| PREDICTED: Apis mellifera similar to CG2991-PB, isoform B
            (LOC412397), mRNA
          Length = 2259

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   taaatagtaatattaacttc 51
            ||||||||||||||||||||
Sbjct: 2202 taaatagtaatattaacttc 2183
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>gb|AC154331.1| Mus musculus BAC clone RP23-256F11 from chromosome 13, complete sequence
          Length = 175414

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 15     aattttaaaaaacagagtaaatagtaatatta 46
              ||||||||||| |||| |||||||||| ||||
Sbjct: 122796 aattttaaaaagcagattaaatagtaaaatta 122827
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>gb|AC020754.4|AC020754 Homo sapiens chromosome 3 clone RP11-37I4 map 3p, complete sequence
          Length = 161612

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     ttttaaaaaacagagtaaat 36
              ||||||||||||||||||||
Sbjct: 125601 ttttaaaaaacagagtaaat 125582
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>gb|AC010359.5|AC010359 Homo sapiens chromosome 5 clone CTD-2033C11, complete sequence
          Length = 204843

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   catagcatgtgattttatac 384
             ||||||||||||||||||||
Sbjct: 59628 catagcatgtgattttatac 59609
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>gb|AC074096.8| Homo sapiens BAC clone RP11-328L16 from 2, complete sequence
          Length = 192649

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     agagtaaatagtaatattaacttc 51
              ||||||||||||| ||||||||||
Sbjct: 171533 agagtaaatagtattattaacttc 171556
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>gb|AC007823.38| Homo sapiens 3 BAC RP11-255C15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 127759

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 604   aagtctttgattttgaacca 623
             ||||||||||||||||||||
Sbjct: 10657 aagtctttgattttgaacca 10638
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>emb|BX005158.8| Zebrafish DNA sequence from clone DKEY-222N6 in linkage group 8,
             complete sequence
          Length = 74638

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    ttttaaaaaacagagtaaatagta 40
             |||||||||||| |||||||||||
Sbjct: 34056 ttttaaaaaacacagtaaatagta 34033
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>gb|AC155928.2| Mus musculus BAC clone RP24-70N20 from 9, complete sequence
          Length = 239304

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    cagagtaaatagtaatattaactt 50
             |||||||||||| |||||||||||
Sbjct: 50504 cagagtaaataggaatattaactt 50481
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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 618    gaaccaccagattgtttctt 637
              ||||||||||||||||||||
Sbjct: 864701 gaaccaccagattgtttctt 864682
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>emb|CR790372.10| Zebrafish DNA sequence from clone DKEY-70K13 in linkage group 2,
             complete sequence
          Length = 77174

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    aaattttaaaaaacagagta 33
             ||||||||||||||||||||
Sbjct: 67539 aaattttaaaaaacagagta 67520
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>gb|AC004701.1|AC004701 Homo sapiens chromosome 4 clone B331M8 map 4q25, complete sequence
          Length = 143839

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    aaattttaaaaaacagagta 33
             ||||||||||||||||||||
Sbjct: 87991 aaattttaaaaaacagagta 88010
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 618    gaaccaccagattgtttctt 637
              ||||||||||||||||||||
Sbjct: 568156 gaaccaccagattgtttctt 568137
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>gb|AC113087.11| Mus musculus chromosome 14, clone RP23-293A2, complete sequence
          Length = 166952

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     aacagagtaaatagtaatat 44
              ||||||||||||||||||||
Sbjct: 108732 aacagagtaaatagtaatat 108751
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>dbj|AP001884.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-148F13, complete
             sequence
          Length = 160492

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 37    agtaatattaacttccaatgaaat 60
             ||||| ||||||||||||||||||
Sbjct: 63770 agtaaaattaacttccaatgaaat 63793
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>dbj|AP002407.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-767M8, complete
              sequence
          Length = 176292

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 37     agtaatattaacttccaatgaaat 60
              ||||| ||||||||||||||||||
Sbjct: 129548 agtaaaattaacttccaatgaaat 129571
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>gb|BC084924.1| Xenopus laevis hypothetical LOC495415, mRNA (cDNA clone MGC:80888
            IMAGE:5515338), complete cds
          Length = 4335

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  ttgctgtgcagatcggcaga 214
            ||||||||||||||||||||
Sbjct: 1029 ttgctgtgcagatcggcaga 1010
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>gb|AC087727.35| Mus musculus strain C57BL/6J chromosome 2 clone rp23-148b16, complete
              sequence
          Length = 202336

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gattctggaggctcaaccaa 325
              ||||||||||||||||||||
Sbjct: 106243 gattctggaggctcaaccaa 106224
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>gb|AC090955.3| Homo sapiens chromosome 3 clone RP11-622A14 map 3p, complete sequence
          Length = 209168

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    ttttaaaaaacagagtaaat 36
             ||||||||||||||||||||
Sbjct: 61796 ttttaaaaaacagagtaaat 61777
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>emb|AL772215.8| Mouse DNA sequence from clone RP23-114N20 on chromosome 2, complete
              sequence
          Length = 187537

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gattctggaggctcaaccaa 325
              ||||||||||||||||||||
Sbjct: 170530 gattctggaggctcaaccaa 170511
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>gb|AC021999.5| Homo sapiens chromosome 3 clone RP11-129J10 map 3p, complete sequence
          Length = 153152

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     ttttaaaaaacagagtaaat 36
              ||||||||||||||||||||
Sbjct: 117138 ttttaaaaaacagagtaaat 117119


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,644,860
Number of Sequences: 3902068
Number of extensions: 6644860
Number of successful extensions: 120503
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120103
Number of HSP's gapped (non-prelim): 397
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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