Clone Name | rbags9o14 |
---|---|
Clone Library Name | barley_pub |
>gb|AC016814.14| Mus musculus chromosome 1, clone RP23-2M16, complete sequence Length = 247961 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 aggctttattcaaacaactgt 118 ||||||||||||||||||||| Sbjct: 60267 aggctttattcaaacaactgt 60287
>gb|AC130277.6| Mus musculus chromosome 1, clone RP24-387G4, complete sequence Length = 125118 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 aggctttattcaaacaactgt 118 ||||||||||||||||||||| Sbjct: 833 aggctttattcaaacaactgt 813
>emb|CR318662.11| Zebrafish DNA sequence from clone CH211-213L7 in linkage group 10, complete sequence Length = 200648 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cactcagcgattaaacaata 48 |||||||||||||||||||| Sbjct: 7575 cactcagcgattaaacaata 7594
>emb|AL355350.8| Human DNA sequence from clone RP11-483B5 on chromosome 10 Contains two novel genes, the 5'end of the gene for VPS10 domain receptor protein SORCS 3 (SORCS3) and a CpG island, complete sequence Length = 153764 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 ggaagagtcgaatccaaagttgga 240 ||||||||| |||||||||||||| Sbjct: 91740 ggaagagtcaaatccaaagttgga 91717
>emb|AL161646.10| Human DNA sequence from clone RP11-127O4 on chromosome 10 Contains two novel genes, the 5'end of the gene for VPS10 domain receptor protein SORCS 3 (SORCS3) and one CpG island, complete sequence Length = 183833 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 ggaagagtcgaatccaaagttgga 240 ||||||||| |||||||||||||| Sbjct: 177883 ggaagagtcaaatccaaagttgga 177860
>gb|AC133480.2| Homo sapiens 12 BAC RP11-12K6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 128301 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 agaaatacgaaaatctcgaaacaa 142 ||||||| |||||||||||||||| Sbjct: 112244 agaaataggaaaatctcgaaacaa 112267
>gb|BC032871.2| Homo sapiens cDNA clone IMAGE:5264902, partial cds Length = 3421 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 aaacaaggcaacccagcctaggct 102 ||||||||||||||||||| |||| Sbjct: 669 aaacaaggcaacccagcctgggct 646
>gb|AC026801.7| Homo sapiens chromosome 5 clone CTD-2517O10, complete sequence Length = 177284 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 aaacaaggcaacccagcctaggct 102 ||||||||||||||||||| |||| Sbjct: 109248 aaacaaggcaacccagcctgggct 109225
>emb|CR925751.6| Zebrafish DNA sequence from clone DKEY-264M23 in linkage group 10, complete sequence Length = 111720 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cactcagcgattaaacaata 48 |||||||||||||||||||| Sbjct: 101117 cactcagcgattaaacaata 101136 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,989,423 Number of Sequences: 3902068 Number of extensions: 1989423 Number of successful extensions: 41609 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41597 Number of HSP's gapped (non-prelim): 12 length of query: 244 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 222 effective length of database: 17,147,199,772 effective search space: 3806678349384 effective search space used: 3806678349384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)