Clone Name | rbags9o07 |
---|---|
Clone Library Name | barley_pub |
>gb|DQ013311.1| Oligocottus maculosus heat shock protein 90 (Hsp90) mRNA, partial cds Length = 811 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 ctctggcagctccagaccctc 237 ||||||||||||||||||||| Sbjct: 568 ctctggcagctccagaccctc 548
>gb|AC140306.3| Mus musculus BAC clone RP23-386L13 from 8, complete sequence Length = 220059 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gaagatacaaaacagtcttgg 68 ||||||||||||||||||||| Sbjct: 143655 gaagatacaaaacagtcttgg 143675
>gb|AY395632.1| Dicentrarchus labrax HSP-90 mRNA, complete cds Length = 2265 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tctggcagctccagaccctc 237 |||||||||||||||||||| Sbjct: 1713 tctggcagctccagaccctc 1694
>gb|AC007578.6| Drosophila melanogaster clone BACR09A11, complete sequence Length = 170684 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gcagttccaaatccaaaacc 340 |||||||||||||||||||| Sbjct: 9221 gcagttccaaatccaaaacc 9240
>gb|AE006376.1| Lactococcus lactis subsp. lactis IL1403 section 138 of 218 of the complete genome Length = 10658 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cgaaaaaatatcagaaacgc 163 |||||||||||||||||||| Sbjct: 224 cgaaaaaatatcagaaacgc 243
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 ggaatgttgcgtgatgctgc 414 |||||||||||||||||||| Sbjct: 5212275 ggaatgttgcgtgatgctgc 5212294
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 ggaatgttgcgtgatgctgc 414 |||||||||||||||||||| Sbjct: 5046588 ggaatgttgcgtgatgctgc 5046607
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gaaacgcgtgttgccggctg 176 |||||||||||||||||||| Sbjct: 254796 gaaacgcgtgttgccggctg 254777
>gb|AC155936.7| Mus musculus 10 BAC RP24-397C20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 177791 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 ccaaatccaaaaccaaagaaatcc 350 ||||| |||||||||||||||||| Sbjct: 63283 ccaaaaccaaaaccaaagaaatcc 63306
>gb|AC007473.10|AC007473 Drosophila melanogaster, chromosome 2R, region 48A-48B, BAC clone BACR38D12, complete sequence Length = 171831 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 gcagttccaaatccaaaacc 340 |||||||||||||||||||| Sbjct: 8728 gcagttccaaatccaaaacc 8709
>gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25 of 73 of the complete sequence Length = 261690 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 gcagttccaaatccaaaacc 340 |||||||||||||||||||| Sbjct: 86901 gcagttccaaatccaaaacc 86882 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,906,777 Number of Sequences: 3902068 Number of extensions: 3906777 Number of successful extensions: 74788 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74762 Number of HSP's gapped (non-prelim): 26 length of query: 490 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 468 effective length of database: 17,147,199,772 effective search space: 8024889493296 effective search space used: 8024889493296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)