ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9o06 |
|---|---|
| Clone Library Name | barley_pub |
>TIM50_ARATH (Q8VYE2) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 376 Score = 195 bits (496), Expect = 1e-49 Identities = 96/152 (63%), Positives = 119/152 (78%), Gaps = 3/152 (1%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 E L KFYE+VVYSDQ+ MYV PV E+LD G +R++L+R ATKY +GKHYRDLSKLNRDP Sbjct: 225 EHLGKFYEIVVYSDQMEMYVLPVCEKLDPNGYIRYKLARGATKYENGKHYRDLSKLNRDP 284 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASF 329 +++++S +A ES LQPEN +PIKP+KLEA+DT L+DLIP LEYVA +DIRPVLASF Sbjct: 285 KKILFVSANAFESTLQPENSVPIKPYKLEADDTALVDLIPFLEYVARNSPADIRPVLASF 344 Query: 328 EGRDIAAEFIERSRRLHEQKQ---QHGRIWRR 242 E +DIA EFI+RS ++KQ GR WRR Sbjct: 345 ERKDIAKEFIDRSIEYQKRKQGQLGQGRFWRR 376
>TIM50_ASPFU (Q4WI16) Import inner membrane translocase subunit tim50,| mitochondrial precursor Length = 501 Score = 109 bits (273), Expect = 7e-24 Identities = 58/137 (42%), Positives = 84/137 (61%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDPAR 503 L ++YE+V+++ SM D V+ +LD +R L R AT+Y G++ +DLS LNRD ++ Sbjct: 259 LNQYYELVLFTSVPSMMADQVLRKLDPYRIIRWPLFREATRYKDGEYIKDLSYLNRDLSK 318 Query: 502 VIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFEG 323 VI I + LQPEN + + W + +D L+ LIP LEY+A V D+RPVL SFEG Sbjct: 319 VILIDTKEEHARLQPENAIILDKWLGDPKDKNLVALIPFLEYIAGMGVEDVRPVLKSFEG 378 Query: 322 RDIAAEFIERSRRLHEQ 272 I EF +R R + E+ Sbjct: 379 TSIPVEFAKRERIMREK 395
>TIM50_YEAST (Q02776) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 476 Score = 106 bits (265), Expect = 6e-23 Identities = 58/139 (41%), Positives = 88/139 (63%), Gaps = 2/139 (1%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDA-KGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 L+++YE+V++S MY D + E+LD V + L + Y G H +DLSKLNRD + Sbjct: 228 LSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLS 287 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFE 326 +VI I LQPEN +P++PW EA+D +L+ LIP LEY+A + D+RP+L SFE Sbjct: 288 KVIIIDTDPNSYKLQPENAIPMEPWNGEADD-KLVRLIPFLEYLATQQTKDVRPILNSFE 346 Query: 325 G-RDIAAEFIERSRRLHEQ 272 +++A EF R ++L ++ Sbjct: 347 DKKNLAEEFDHRVKKLKDK 365
>TIM50_EMENI (Q5B4P0) Import inner membrane translocase subunit tim50,| mitochondrial precursor Length = 532 Score = 105 bits (262), Expect = 1e-22 Identities = 56/137 (40%), Positives = 83/137 (60%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDPAR 503 L ++YE+V+++ SM D V+ +LD +R L R AT+Y G++ +DLS LNRD ++ Sbjct: 288 LNQYYELVLFTSVPSMMADQVLRKLDPYRIIRWPLFREATRYKDGEYIKDLSYLNRDLSK 347 Query: 502 VIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFEG 323 VI I + LQPEN + + W +D L+ LIP LEY+A V D+R VL SFEG Sbjct: 348 VILIDTKEEHARLQPENAIILDKWNGNPKDKTLVALIPFLEYLAGMGVDDVRTVLKSFEG 407 Query: 322 RDIAAEFIERSRRLHEQ 272 + I EF +R + + E+ Sbjct: 408 QSIPIEFAKREKAMRER 424
>TIM50_CAEEL (Q22647) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 452 Score = 105 bits (261), Expect = 2e-22 Identities = 56/137 (40%), Positives = 84/137 (61%), Gaps = 1/137 (0%) Frame = -2 Query: 670 YEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDPARVIYI 491 +EVV+YS + M PV++ D K + ++L R TKY++G H +DLSKLNRD ++VIYI Sbjct: 289 FEVVIYSSESMMTAAPVVDSFDPKQRIMYKLFRDCTKYMNGHHVKDLSKLNRDLSKVIYI 348 Query: 490 SGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASF-EGRDI 314 A L PEN L + WK +DT L+DL LL+ + ++ D+RP+L + + D Sbjct: 349 DFDAKSGQLNPENMLRVPEWKGNMDDTSLVDLAELLKTIHLSDAEDVRPMLQYYSQYDDP 408 Query: 313 AAEFIERSRRLHEQKQQ 263 A EF R+ L +Q++Q Sbjct: 409 AKEFRRRAVYLSQQEEQ 425
>TIM50_MOUSE (Q9D880) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 353 Score = 103 bits (258), Expect = 4e-22 Identities = 53/143 (37%), Positives = 87/143 (60%), Gaps = 1/143 (0%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 +QLA YE+V+++ + M P+++ +D G + +RL R AT+Y+ G H +D+S LNRDP Sbjct: 182 QQLAPLYEIVIFTSETGMTAFPLIDSVDPHGFISYRLFRDATRYMEGHHVKDISCLNRDP 241 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASF 329 ARV+ + LQP N + ++PW ++D L+DL L+ +A+ +V D+R VL + Sbjct: 242 ARVVVVDCKKEAFRLQPFNGVALRPWDGNSDDRVLLDLSAFLKTIALNQVEDVRTVLEHY 301 Query: 328 EGRDIAAE-FIERSRRLHEQKQQ 263 D E F +R RL +++QQ Sbjct: 302 ALEDDPLEAFKQRQSRLEQEEQQ 324
>TIM50_CANGA (Q6FRX4) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 485 Score = 103 bits (257), Expect = 5e-22 Identities = 59/159 (37%), Positives = 95/159 (59%), Gaps = 7/159 (4%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDA-KGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 L+++YE+V++S MY + + E++D + + L + Y G H +DLSKLNRD Sbjct: 234 LSQYYEIVLFSSNYMMYAEKIAEKMDPIHAFISYNLFKEHCVYKDGVHIKDLSKLNRDLK 293 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFE 326 +V+ I LQPEN +P+ PW +A+D +L+ LIP LEY+A +V D+RP+L S+ Sbjct: 294 KVMIIDTDENSYKLQPENAIPMDPWDGKADD-KLLRLIPFLEYMATQQVEDVRPILKSYH 352 Query: 325 G-RDIAAEFIERSRRL-----HEQKQQHGRIWRR*LLNL 227 R++ AEF +R ++L +QK+++ W LL L Sbjct: 353 NKRELPAEFEQRVQKLKNKFEQDQKKKNDSNWLLKLLGL 391
>TIM50_CAEBR (Q61JS7) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 456 Score = 103 bits (257), Expect = 5e-22 Identities = 55/137 (40%), Positives = 84/137 (61%), Gaps = 1/137 (0%) Frame = -2 Query: 670 YEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDPARVIYI 491 +EVV+YS + M PV++ D K + ++L R TKY++G H +DLSKLNRD ++VIYI Sbjct: 293 FEVVIYSSESMMTAAPVVDSFDQKQRIMYKLFRDCTKYMNGHHVKDLSKLNRDLSKVIYI 352 Query: 490 SGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASF-EGRDI 314 A L PEN L + W+ +DT L+DL LL+ + ++ D+RP+L + + D Sbjct: 353 DFDAKSGQLNPENMLRVPEWRGNMDDTSLVDLAELLKTIHLSDAEDVRPMLQYYSQYDDP 412 Query: 313 AAEFIERSRRLHEQKQQ 263 A EF R+ L +Q++Q Sbjct: 413 AKEFRRRAVYLAQQEEQ 429
>TIM50_PONPY (Q5RAJ8) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 353 Score = 102 bits (254), Expect = 1e-21 Identities = 53/143 (37%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 +QLA YE+V+++ + M P+++ +D G + +RL R AT+Y+ G H +D+S LNRDP Sbjct: 182 QQLAPLYEIVIFTSETGMTAFPLIDSVDPHGFISYRLFRDATRYMDGHHVKDISCLNRDP 241 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASF 329 ARV+ + LQP N + ++PW ++D L+DL L+ +A+ V D+R VL + Sbjct: 242 ARVVVVDCKKEAFRLQPYNGVALRPWDGNSDDRVLLDLSAFLKTIALNGVEDVRTVLEHY 301 Query: 328 E-GRDIAAEFIERSRRLHEQKQQ 263 D A F +R RL +++QQ Sbjct: 302 ALEDDPLAAFKQRQSRLEQEEQQ 324
>TIM50_HUMAN (Q3ZCQ8) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 353 Score = 102 bits (254), Expect = 1e-21 Identities = 53/143 (37%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 +QLA YE+V+++ + M P+++ +D G + +RL R AT+Y+ G H +D+S LNRDP Sbjct: 182 QQLAPLYEIVIFTSETGMTAFPLIDSVDPHGFISYRLFRDATRYMDGHHVKDISCLNRDP 241 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASF 329 ARV+ + LQP N + ++PW ++D L+DL L+ +A+ V D+R VL + Sbjct: 242 ARVVVVDCKKEAFRLQPYNGVALRPWDGNSDDRVLLDLSAFLKTIALNGVEDVRTVLEHY 301 Query: 328 E-GRDIAAEFIERSRRLHEQKQQ 263 D A F +R RL +++QQ Sbjct: 302 ALEDDPLAAFKQRQSRLEQEEQQ 324
>TIM50_PHYIN (Q5S7T7) Import inner membrane translocase subunit TIM50,| mitochondrial precursor (NIF domain protein 3) Length = 409 Score = 102 bits (253), Expect = 1e-21 Identities = 56/149 (37%), Positives = 87/149 (58%), Gaps = 7/149 (4%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 E L ++YE+V++S + ++++LD K C H LSR AT+Y++G H +DLS LNRD Sbjct: 203 ETLCQYYEIVIFSQNYG--AEEIVQKLDPKQCALHILSRDATRYLNGAHVKDLSNLNRDL 260 Query: 508 ARVIYISGHALESCLQPENCLPIKPWK--LEAEDTQLIDLIPLLEYVAMARVSDIRPVLA 335 +V+ + LQPEN +P+ P+ + +D +L DLIP L+ +A RV D R V+ Sbjct: 261 RQVVILDDDPAAYQLQPENAIPVTPFTNGRDRDDHELKDLIPFLKALASERVPDFRQVIG 320 Query: 334 SFEG-----RDIAAEFIERSRRLHEQKQQ 263 F RD+A ++ R +L QK+Q Sbjct: 321 EFRDEDGVVRDLATKYGARVHQLEMQKEQ 349
>TIM50_BOVIN (Q3SZB3) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 355 Score = 101 bits (251), Expect = 2e-21 Identities = 52/143 (36%), Positives = 85/143 (59%), Gaps = 1/143 (0%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 +QLA YE+V+++ + M P+++ +D G + +RL R AT+Y+ G H +D+S LNRDP Sbjct: 184 QQLAPLYEIVIFTSETGMTAFPLIDSVDPHGFISYRLFRDATRYMDGHHVKDISCLNRDP 243 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASF 329 ARV+ + LQP N + ++PW ++D L+DL L+ +A+ V D+R VL + Sbjct: 244 ARVVVVDCKKEAFRLQPYNGVALRPWDGNSDDRVLLDLSAFLKTIALNGVEDVRTVLEHY 303 Query: 328 E-GRDIAAEFIERSRRLHEQKQQ 263 D F +R RL +++QQ Sbjct: 304 ALEEDPLEAFKQRQSRLEQEEQQ 326
>TIM50_CANAL (Q59W44) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 469 Score = 101 bits (251), Expect = 2e-21 Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 3/145 (2%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDA-KGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 L+++YE+VV+S +Y D + +LD + + L R A +Y GK +DLS LNRD Sbjct: 224 LSQYYEIVVFSSNSQIYSDKTVNKLDPYHAYISYALFREACRYKDGKLIKDLSLLNRDLG 283 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFE 326 + + I + LQPEN + +K W+ + D LI LIP LEY+A V D+RP+L S++ Sbjct: 284 KTVMIDVDEDSAALQPENSIIVKKWEGQ-PDEYLISLIPFLEYLATQPVKDVRPILNSYK 342 Query: 325 GR-DIAAEFIERSRRLHEQ-KQQHG 257 + +I AEF ER +L EQ ++ HG Sbjct: 343 DKSNIVAEFAERENKLREQWRKDHG 367
>TIM50_GIBZE (Q4I099) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 525 Score = 100 bits (249), Expect = 4e-21 Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 3/142 (2%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDPAR 503 L+++YE+V+++ +PVM +LD + L R ATK+ G+ +DLS LNRD ++ Sbjct: 274 LSQYYELVLFTTTPYATGEPVMRKLDPFRLILWPLYREATKFEDGEIVKDLSYLNRDLSK 333 Query: 502 VIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFEG 323 VI I A QP+N + + PWK + +D L++LIP LEY+ + SD+R V+ SF+G Sbjct: 334 VIIIDTKAKHVRNQPDNAIILDPWKGDKDDKNLVNLIPFLEYIHTMQYSDVRKVIKSFDG 393 Query: 322 RDIAAEFIER---SRRLHEQKQ 266 +DI EF R +R+ + KQ Sbjct: 394 KDIPTEFARREAIARKEFQAKQ 415
>TIM50_SCHPO (O13636) Import inner membrane translocase subunit tim50,| mitochondrial precursor Length = 452 Score = 100 bits (248), Expect = 5e-21 Identities = 50/135 (37%), Positives = 84/135 (62%), Gaps = 1/135 (0%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDAKGC-VRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 L+ +YEVV+++ Q P+++++D + L+R ++KY GK +DLS LNRD + Sbjct: 213 LSMYYEVVIFTRQYLATAKPIIDKIDPYHVSISAVLTRESSKYEKGKVIKDLSYLNRDLS 272 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFE 326 RVI I + QP+N + + PW +D +L+ LIPLLE++A+ + D+RPVL S++ Sbjct: 273 RVIMIDTNPESWSKQPDNAIAMAPWTGNPKDKELVGLIPLLEFIAIMDIKDVRPVLKSYQ 332 Query: 325 GRDIAAEFIERSRRL 281 G++I E+ R +L Sbjct: 333 GKNIPLEYARREEKL 347
>TIM50_DEBHA (Q6BVY9) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 471 Score = 99.8 bits (247), Expect = 7e-21 Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 2/139 (1%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDA-KGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 L+++YE+V++ MY + + +LD V + L R A +Y GK +DLS LNRD Sbjct: 226 LSQYYEIVIFGSNYQMYSENTVGKLDPFHAYVSYALFREACRYKDGKLVKDLSLLNRDLG 285 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFE 326 + + I +QP+N +P+KPW +DT L+ LIP LEY+A V D+RP+L SF+ Sbjct: 286 KTVLIDVEEDSWSMQPDNAIPMKPWDGSYDDT-LVKLIPFLEYLATQPVKDVRPILNSFK 344 Query: 325 GR-DIAAEFIERSRRLHEQ 272 + +I EF ER +L EQ Sbjct: 345 DKSNIVQEFAEREAKLREQ 363
>TIM50_CRYNE (Q5KNV7) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 516 Score = 99.4 bits (246), Expect = 9e-21 Identities = 52/148 (35%), Positives = 88/148 (59%), Gaps = 1/148 (0%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDA-KGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 L++FYE+V++S Q P+ E++D + + +RL R +T+ V GK +D+S LNRDP+ Sbjct: 272 LSQFYEIVLFSSQPLYTAAPIAEKIDPYQAFMPYRLFRESTRSVKGKVVKDISFLNRDPS 331 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFE 326 +VI + + LQPEN + ++PW D L+D+IP LE + + +D+RP+L ++ Sbjct: 332 KVIVLDVNPEHVALQPENGIVLQPWNGSPGDKGLVDMIPFLESIGIFNPADVRPILQAYA 391 Query: 325 GRDIAAEFIERSRRLHEQKQQHGRIWRR 242 G+DI E+ ++ E K + W R Sbjct: 392 GKDIPIEYAKKEA---EAKAKAIEEWER 416
>TIM50_KLULA (Q6CM45) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 480 Score = 99.0 bits (245), Expect = 1e-20 Identities = 55/146 (37%), Positives = 90/146 (61%), Gaps = 2/146 (1%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDA-KGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 L+++YE+V++S MY + + E+LD + + L + Y G H +DLSKLNRD Sbjct: 231 LSQYYEIVLFSSNYMMYAEKIAEKLDPIHAFITYNLFKEHCLYKDGVHIKDLSKLNRDLG 290 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASF- 329 +V+ I LQPEN + ++PW +A+D +L+ LIP LEY+A +VSD+RP+L SF Sbjct: 291 KVLIIDTDENSFKLQPENAIYLEPWDGKADD-RLLRLIPFLEYLATQQVSDVRPILKSFP 349 Query: 328 EGRDIAAEFIERSRRLHEQKQQHGRI 251 + ++I F +R + L E+ ++ R+ Sbjct: 350 DNKNIPEAFEKRVQVLKEKFERDERV 375
>TIM50_NEUCR (Q874C1) Import inner membrane translocase subunit tim-50,| mitochondrial precursor Length = 540 Score = 95.5 bits (236), Expect = 1e-19 Identities = 48/130 (36%), Positives = 76/130 (58%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDPAR 503 L+++YE+V+++ +P++ ++D + L R ATKY G+ +DLS LNRD ++ Sbjct: 285 LSQYYEIVLFTSVPFANAEPIVRKMDPYRFIMWPLFREATKYKDGEIVKDLSYLNRDLSK 344 Query: 502 VIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFEG 323 VI I QPEN + + WK + +DT+L+ L+P LE++ D+R VL SFEG Sbjct: 345 VIIIDTDPKHVRAQPENAIVLPKWKGDPKDTELVSLVPFLEFIHTMNFPDVRKVLKSFEG 404 Query: 322 RDIAAEFIER 293 + I EF R Sbjct: 405 QHIPTEFARR 414
>TI50A_DROME (Q9V9P3) Import inner membrane translocase subunit TIM50-A,| mitochondrial precursor Length = 343 Score = 94.4 bits (233), Expect = 3e-19 Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 +Q ++ +E+V+Y+ + M P+++ LD G +++RL R AT V G+H ++L LNRD Sbjct: 174 QQCSRNFEIVIYTSEQGMTAFPLLDALDPYGYIKYRLVRGATDLVEGQHTKNLDYLNRDL 233 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASF 329 +RVI + + L P+N L + W +D QL DL L+ +A +V+D+R VL + Sbjct: 234 SRVIVVDCDPYTTPLHPDNSLVLTKWLGNDDDVQLFDLTAFLQLIAEHQVNDVREVLRYY 293 Query: 328 -EGRDIAAEFIERSRRLHEQKQQ 263 + D +F + RRL EQ Q+ Sbjct: 294 RQFEDPMEQFKDNQRRLQEQSQE 316
>TIM50_YARLI (Q6CDV7) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 466 Score = 94.0 bits (232), Expect = 4e-19 Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 1/138 (0%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDA-KGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 L ++YE+V++S Q + ++ +LD H L+R T Y GK +DLS +NRD Sbjct: 229 LGQYYEIVLFSSQYMANCEKLIMKLDPYHAWFSHVLTREHTTYEDGKLVKDLSLMNRDMG 288 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFE 326 ++I I + QPEN +PI+PWK D +L+ LIP LE++ V+D+RP+L +F+ Sbjct: 289 KIIIIDPDTGCTMKQPENSIPIEPWKGTPGDKELVKLIPFLEWLVSQNVNDVRPILKAFD 348 Query: 325 GRDIAAEFIERSRRLHEQ 272 G + EF R E+ Sbjct: 349 GTYLPDEFTRREAIAREK 366
>TI50C_DROME (Q9W4V8) Import inner membrane translocase subunit TIM50-C,| mitochondrial precursor Length = 428 Score = 91.7 bits (226), Expect = 2e-18 Identities = 52/146 (35%), Positives = 82/146 (56%), Gaps = 1/146 (0%) Frame = -2 Query: 685 QLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 + AK +E+VV++ + M V P+++ LD G + +RL R AT +V G H ++L LNRD Sbjct: 264 ECAKDFEIVVFTAEQGMTVFPILDALDPNGYIMYRLVRDATHFVDGHHVKNLDNLNRDLK 323 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASF- 329 +VI + A + + P+N + W +D QL+DLI L+ +A V D+R VL + Sbjct: 324 KVIVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVREVLHYYR 383 Query: 328 EGRDIAAEFIERSRRLHEQKQQHGRI 251 + D +F E R+L EQ + RI Sbjct: 384 QFDDPINQFRENQRKLAEQMLEAERI 409
>TIM50_BRARE (Q6NWD4) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 387 Score = 91.3 bits (225), Expect = 3e-18 Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 19/168 (11%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 +QLA YE+V+++ + M P+++ +D +G V +RL R AT+Y+ G H +D+S LNRD Sbjct: 217 QQLAPLYEIVIFTSETGMTAYPLIDSIDPQGFVMYRLFRDATRYMEGHHVKDVSCLNRDT 276 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASF 329 ++VI + LQP N L + W +ED L DL L+ +A + V D+R VL ++ Sbjct: 277 SKVIVVDCKREAFGLQPFNGLALCKWDGNSEDRTLYDLAAFLKTIATSGVEDVRSVLENY 336 Query: 328 EGRD------------IAAEFIERSRRLHEQKQQ-------HGRIWRR 242 + +A E +R + +QK+Q GR W R Sbjct: 337 AHEEDPIEAFKRRQAQLAREEEQRISEMAQQKKQGFSLGTIAGRFWSR 384
>TIM50_USTMA (Q4PEW9) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 493 Score = 90.9 bits (224), Expect = 3e-18 Identities = 46/139 (33%), Positives = 81/139 (58%), Gaps = 1/139 (0%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDA-KGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 L++FYE+V+++ Q P++E+LD + + + L R + + V GK +DL+ LNRD + Sbjct: 257 LSQFYEIVLFTTQPFFTAGPIIEKLDPDRRFITYTLFRESCRTVDGKLVKDLNHLNRDLS 316 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFE 326 +V+ + + L PEN + +KPWK E ED +LI LIP E + + + D+R + ++ Sbjct: 317 KVVVVDTNPDSFHLHPENGILVKPWKGEREDRELIGLIPFFEAIGIYNIDDVRNTIKAYT 376 Query: 325 GRDIAAEFIERSRRLHEQK 269 G I E R+ + E++ Sbjct: 377 GTHIPTEHARRTAAIRERE 395
>TI50B_DROME (Q9W0S3) Import inner membrane translocase subunit TIM50-B,| mitochondrial precursor Length = 409 Score = 84.3 bits (207), Expect = 3e-16 Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 1/139 (0%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 ++ AK++E+VVY+ + + V P+++ LD GC+ +RL R +T + G H ++L LNRD Sbjct: 244 KECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDNLNRDL 303 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASF 329 RV+ + + P N I W DT L +L L + + + D+R VL + Sbjct: 304 KRVVVVDWDRNSTKFHPSNSFSIPRWSGNDNDTTLFELTSFLSVLGTSEIDDVREVLQYY 363 Query: 328 -EGRDIAAEFIERSRRLHE 275 + D ++F E R+L E Sbjct: 364 NQFSDSLSQFRENQRKLGE 382
>PSR2_YEAST (Q07949) Probable phosphatase PSR2 (EC 3.1.3.-) (Plasma membrane| sodium response protein 2) Length = 397 Score = 80.5 bits (197), Expect = 4e-15 Identities = 37/116 (31%), Positives = 66/116 (56%) Frame = -2 Query: 685 QLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 ++++ YEVVV++ +S Y +P+++ LD G + HRL R A G + ++LS++ R + Sbjct: 278 RVSQLYEVVVFTASVSRYANPLLDTLDPNGTIHHRLFREACYNYEGNYIKNLSQIGRPLS 337 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVL 338 I + P++ +PI W + D +L+D+IPLLE ++ V D+ VL Sbjct: 338 ETIILDNSPASYIFHPQHAVPISSWFSDTHDNELLDIIPLLEDLSSGNVLDVGSVL 393
>YA22_SCHPO (Q09695) Hypothetical protein C2F7.02c in chromosome I| Length = 325 Score = 79.3 bits (194), Expect = 1e-14 Identities = 43/117 (36%), Positives = 64/117 (54%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 +++ +E+VV++ L+ Y DPV++ LD +RHRL R A G +DLS+L R+ Sbjct: 207 KKMGDMFEIVVFTASLAKYADPVLDMLDHSHVIRHRLFREACCNYEGNFVKDLSQLGRNL 266 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVL 338 I I P + +PI W + D +LIDLIP LE+ +ARV D+ VL Sbjct: 267 EDSIIIDNSPSSYIFHPSHAVPISSWFNDMHDMELIDLIPFLEH--LARVPDVSTVL 321
>TIM50_ASHGO (Q75A73) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 476 Score = 78.6 bits (192), Expect = 2e-14 Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 2/136 (1%) Frame = -2 Query: 682 LAKFYEVVVYSDQLSMYVDPVMERLDA-KGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 L+ +YE V++ +Y V+E+LD + + + L + Y G H +DLS LNRD Sbjct: 227 LSDYYENVLFPSNYMVYSKKVVEKLDPIRAFITYNLFKDHCVYKDGIHIKDLSHLNRDLG 286 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVLASFE 326 + + I LQ EN + +PW +A+D L+ IP LEY+ ++D+RP+L SF+ Sbjct: 287 KTLIIDTDPNSVKLQMENAILAEPWDGKADDA-LLRYIPFLEYLVTQPINDVRPILNSFK 345 Query: 325 GR-DIAAEFIERSRRL 281 R I EF ER +L Sbjct: 346 DRHHIPEEFAERVEKL 361
>CTDSL_MOUSE (P58465) CTD small phosphatase-like protein (CTDSP-like) (Small| C-terminal domain phosphatase 3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (NIF-like protein) Length = 276 Score = 77.8 bits (190), Expect = 3e-14 Identities = 38/117 (32%), Positives = 67/117 (57%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 +++ + +E V+++ L+ Y DPV + LD G R RL R + + G + +DLS+L R+ Sbjct: 156 QRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGREL 215 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVL 338 ++VI + PEN +P++ W + DT+L+DLIP E ++R D+ +L Sbjct: 216 SKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFE--GLSREDDVYSML 270
>CTDSL_HUMAN (O15194) CTD small phosphatase-like protein (CTDSP-like) (Small| C-terminal domain phosphatase 3) (Small CTD phosphatase 3) (SCP3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (NIF-like protein) (RBSP3) (YA22 protei Length = 276 Score = 77.8 bits (190), Expect = 3e-14 Identities = 38/117 (32%), Positives = 67/117 (57%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 +++ + +E V+++ L+ Y DPV + LD G R RL R + + G + +DLS+L R+ Sbjct: 156 QRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGREL 215 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVL 338 ++VI + PEN +P++ W + DT+L+DLIP E ++R D+ +L Sbjct: 216 SKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFE--GLSREDDVYSML 270
>CTDS1_MOUSE (P58466) Carboxy-terminal domain RNA polymerase II polypeptide A| small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (Golli-interacting protein) (GIP) Length = 261 Score = 77.0 bits (188), Expect = 5e-14 Identities = 39/117 (33%), Positives = 64/117 (54%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 +++ + +E V+++ L+ Y DPV + LD G R RL R + + G + +DLS+L RD Sbjct: 140 QRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDL 199 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVL 338 RV+ + P+N +P+ W DT+L DL+P E ++RV D+ VL Sbjct: 200 RRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFE--QLSRVDDVYSVL 254
>CTDS1_HUMAN (Q9GZU7) Carboxy-terminal domain RNA polymerase II polypeptide A| small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (NLI-IF) Length = 261 Score = 77.0 bits (188), Expect = 5e-14 Identities = 39/117 (33%), Positives = 64/117 (54%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 +++ + +E V+++ L+ Y DPV + LD G R RL R + + G + +DLS+L RD Sbjct: 140 QRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDL 199 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVL 338 RV+ + P+N +P+ W DT+L DL+P E ++RV D+ VL Sbjct: 200 RRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFE--QLSRVDDVYSVL 254
>PSR1_YEAST (Q07800) Phosphatase PSR1 (EC 3.1.3.-) (Plasma membrane sodium| response protein 1) Length = 427 Score = 77.0 bits (188), Expect = 5e-14 Identities = 36/117 (30%), Positives = 66/117 (56%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 E++ K +EVVV++ +S Y DP+++ LD + HRL R A G + ++LS++ R Sbjct: 307 ERVGKLFEVVVFTASVSRYGDPLLDILDTDKVIHHRLFREACYNYEGNYIKNLSQIGRPL 366 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMARVSDIRPVL 338 + +I + P++ +PI W + D +L+D+IPLLE +++ D+ +L Sbjct: 367 SDIIILDNSPASYIFHPQHAIPISSWFSDTHDNELLDIIPLLEDLSVKTSLDVGKIL 423
>CTDSL_CHICK (Q9PTJ6) CTD small phosphatase-like protein (CTDSP-like) (Small| C-terminal domain phosphatase 3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) Length = 275 Score = 76.3 bits (186), Expect = 8e-14 Identities = 35/103 (33%), Positives = 60/103 (58%) Frame = -2 Query: 688 EQLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDP 509 +++ + +E V+++ L+ Y DPV + LD G R RL R + + G + +DLS+L R+ Sbjct: 155 QRMGELFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGREL 214 Query: 508 ARVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLE 380 ++VI + PEN +P++ W + DT+L+DLIP E Sbjct: 215 SKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFE 257
>CTDS2_MOUSE (Q8BX07) Carboxy-terminal domain RNA polymerase II polypeptide A| small phosphatase 2 (EC 3.1.3.16) Length = 270 Score = 72.4 bits (176), Expect = 1e-12 Identities = 34/102 (33%), Positives = 58/102 (56%) Frame = -2 Query: 685 QLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 ++ + +E V+++ L+ Y DPV + LD G R RL R A + G + +DLS+L RD Sbjct: 151 RMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFREACVFHQGCYVKDLSRLGRDLR 210 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLE 380 + + + PEN +P++ W + DT+L++LIP+ E Sbjct: 211 KTVILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPVFE 252
>CTDS2_HUMAN (O14595) Carboxy-terminal domain RNA polymerase II polypeptide A| small phosphatase 2 (EC 3.1.3.16) (Small CTD phosphatase 2) (SCP2) (Nuclear LIM interactor-interacting factor 2) (NLI-interacting factor 2) (Protein OS-4) Length = 271 Score = 71.6 bits (174), Expect = 2e-12 Identities = 34/107 (31%), Positives = 61/107 (57%) Frame = -2 Query: 685 QLAKFYEVVVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDPA 506 ++ + +E V+++ L+ Y DPV + LD G R RL R + + G + +DLS+L RD Sbjct: 152 RMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFRESCVFHQGCYVKDLSRLGRDLR 211 Query: 505 RVIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMA 365 + + + PEN +P++ W + DT+L++LIP+ E ++ A Sbjct: 212 KTLILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPIFEELSGA 258
>YHG4_YEAST (P38757) Hypothetical 50.6 kDa protein in RPL14B-GPA1 intergenic| region Length = 446 Score = 44.3 bits (103), Expect = 4e-04 Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 13/134 (9%) Frame = -2 Query: 685 QLAKFYEVVVYSDQLSMYVDPVMERLDAK--GCVRHRLSRVATKYVHGKHY-RDLSKLNR 515 +++K+Y++++++ + Y DPV++ L++ R R G Y +DLS + Sbjct: 308 KVSKWYDLIIFTASMKEYADPVIDWLESSFPSSFSKRYYRSDCVLRDGVGYIKDLSIVKD 367 Query: 514 DPAR----------VIYISGHALESCLQPENCLPIKPWKLEAEDTQLIDLIPLLEYVAMA 365 VI I + + +N + ++ W + DT L++L+P LE AM Sbjct: 368 SEENGKGSSSSLDDVIIIDNSPVSYAMNVDNAIQVEGWISDPTDTDLLNLLPFLE--AMR 425 Query: 364 RVSDIRPVLASFEG 323 +D+R +LA G Sbjct: 426 YSTDVRNILALKHG 439
>MAM1_SCHPO (P78966) Mating factor M secretion protein mam1 (Multiple drug| resistance protein homolog) (P-glycoprotein) Length = 1336 Score = 30.4 bits (67), Expect = 5.3 Identities = 15/69 (21%), Positives = 31/69 (44%) Frame = -2 Query: 661 VVYSDQLSMYVDPVMERLDAKGCVRHRLSRVATKYVHGKHYRDLSKLNRDPARVIYISGH 482 ++ D+ + +DP+ + L HR + H D+S++N D ++ GH Sbjct: 591 ILILDEPTSALDPITKNLVMDAIRAHRKGKTTLVITH-----DMSQINNDELVLVIDKGH 645 Query: 481 ALESCLQPE 455 ++ C + E Sbjct: 646 LIQRCARKE 654
>Y104_SULSO (P95957) Putative aminotransferase SSO0104 (EC 2.6.1.-) (AspB-1)| Length = 401 Score = 30.0 bits (66), Expect = 7.0 Identities = 25/84 (29%), Positives = 36/84 (42%) Frame = -2 Query: 583 RLSRVATKYVHGKHYRDLSKLNRDPARVIYISGHALESCLQPENCLPIKPWKLEAEDTQL 404 R TKY+ RDL KL + VI ++G L P++ K A+D L Sbjct: 4 RFLSTETKYLRTSEIRDLLKLT-EGKNVISLAGG-----LPDPQTFPVEEIKKIADDILL 57 Query: 403 IDLIPLLEYVAMARVSDIRPVLAS 332 L+Y A A +S+ R L + Sbjct: 58 NSADKALQYTATAGISEFRRELVN 81 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,950,245 Number of Sequences: 219361 Number of extensions: 1727120 Number of successful extensions: 3967 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3809 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3947 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
