Clone Name | rbags9n05 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK058672.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H04, full insert sequence Length = 2175 Score = 218 bits (110), Expect = 2e-53 Identities = 389/482 (80%) Strand = Plus / Minus Query: 124 gtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaaggcca 183 |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 1731 gtcatcttgctctggatttgcctgtgcacatgcacaaggaactccacataggaaaggcca 1672 Query: 184 ccaggtgctttgtcctccaccaacagcgaacggaagaaatctccagacgggtcgcccttt 243 |||||||| |||||||| ||| | || ||||||||||| ||||| || || ||| || Sbjct: 1671 ccaggtgccttgtcctctgtcaaaaatgagcggaagaaatcaccagatggttcacccctt 1612 Query: 244 cggcacagtctcagtctcaagtaagagcatctctgtcgccttatttcattcacgacttca 303 | ||| || | || || || ||||| |||||||| || ||||||||||| | |||||| Sbjct: 1611 ctgcatagacgcaaccttaaataagaacatctctggcgtcttatttcattaattacttca 1552 Query: 304 ttcactttcctggacaatgcattatcaaattgctccaatgccaacagatttggtgcacca 363 || || |||| |||| | |||| |||||||||||||| | | || ||||| || Sbjct: 1551 tttaccttccgtgacagttcattgtcaaattgctccaacacagcctgacttggtaatgca 1492 Query: 364 gccaaggatgagagaccaaatatttgctccagggtggccgggttcaccgcatttccgaca 423 ||||| || || | |||||||||||| || ||| ||| ||| | ||| ||||||| ||| Sbjct: 1491 gccaaagaagacacaccaaatatttgttcgaggatggtcggctctaccacatttcctaca 1432 Query: 424 tagataaaaccatcctcgccattttccaataaataaatcccatcatcctgtatattctca 483 || || | ||||||||| ||||||||||||||||| | ||||| || ||||||| ||| Sbjct: 1431 taaattagaccatcctcaccattttccaataaatagactccatcttcacgtatattttca 1372 Query: 484 ctattgagagtaaggggatttggaataagggaatcctcatcatcccttgatgtaagatca 543 |||||||| |||||||| | |||||||| || || || || |||||||||| |||||| Sbjct: 1371 ctattgagcataaggggactaggaataagtgattcatcgtctccccttgatgtgagatca 1312 Query: 544 tggagagcaatcatcctagggaacaccaatggaatggctaataacacagaaactgaggag 603 || | | ||||| ||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 1311 tgaatcggaatcaatctagggaacaccaatggaacagctaatagaacagaaactgaggag 1252 Query: 604 ac 605 || Sbjct: 1251 ac 1250
>gb|AY107397.1| Zea mays PCO076624 mRNA sequence Length = 2256 Score = 214 bits (108), Expect = 3e-52 Identities = 387/480 (80%) Strand = Plus / Minus Query: 120 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 179 ||||||||||||||| |||||||||||||| ||||| || |||||||| || ||||| | Sbjct: 1839 tcaggtcatcttgctttggatttgcctgtggacatgcacaaggaactcgacgtaggagaa 1780 Query: 180 gccaccaggtgctttgtcctccaccaacagcgaacggaagaaatctccagacgggtcgcc 239 | | ||||| || ||||||||||| || | || ||||| ||||| ||||| || || || Sbjct: 1779 gacgccaggcgccttgtcctccactaaaaatgaccggaaaaaatcaccagatggttcacc 1720 Query: 240 ctttcggcacagtctcagtctcaagtaagagcatctctgtcgccttatttcattcacgac 299 | ||| ||| |||| | |||||||| ||||| ||||| || ||||||||||| || || Sbjct: 1719 ccttctgcattgtcttaacctcaagtatgagcacctctggcgtcttatttcatttacaac 1660 Query: 300 ttcattcactttcctggacaatgcattatcaaattgctccaatgccaacagatttggtgc 359 ||| || || ||||| || | | | || |||||||||||||| |||||| | |||| Sbjct: 1659 ttcgttaaccttcctcgagagttcgttgtcaaattgctccaacgccaactgggctggtaa 1600 Query: 360 accagccaaggatgagagaccaaatatttgctccagggtggccgggttcaccgcatttcc 419 ||||||| || |||| ||| |||||||| |||||||| ||||| || ||| ||||| Sbjct: 1599 tgcagccaaagaagagacaccgaatatttgttccagggtagccggatttaccatgtttcc 1540 Query: 420 gacatagataaaaccatcctcgccattttccaataaataaatcccatcatcctgtatatt 479 ||||| || ||||||||||| ||||||||||||||||||| ||||| || |||| ||| Sbjct: 1539 tacataaattaaaccatcctcaccattttccaataaataaactccatcctcttgtacatt 1480 Query: 480 ctcactattgagagtaaggggatttggaataagggaatcctcatcatcccttgatgtaag 539 |||||||||||| |||||||| | || ||||| ||||| || |||||||||||||| || Sbjct: 1479 ctcactattgagcataaggggactgggtataagagaatcatcgtcatcccttgatgtgag 1420 Query: 540 atcatggagagcaatcatcctagggaacaccaatggaatggctaataacacagaaactga 599 ||| |||| || ||||| |||||||||||||| |||| |||| || ||||||||||| Sbjct: 1419 atcgtggataggaatcaatctagggaacaccaaaggaacagctagtactacagaaactga 1360
>gb|BT016644.1| Zea mays clone Contig477 mRNA sequence Length = 1961 Score = 206 bits (104), Expect = 7e-50 Identities = 386/480 (80%) Strand = Plus / Minus Query: 120 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 179 ||||||||||||||| |||||||||||||| ||||| || |||||||| || ||||| | Sbjct: 1302 tcaggtcatcttgctttggatttgcctgtggacatgcacaaggaactcgacgtaggagaa 1243 Query: 180 gccaccaggtgctttgtcctccaccaacagcgaacggaagaaatctccagacgggtcgcc 239 | | ||||| || ||||||||||| || | || ||||| ||||| ||||| || || || Sbjct: 1242 gacgccaggcgccttgtcctccactaaaaatgaccggaaaaaatcaccagatggttcacc 1183 Query: 240 ctttcggcacagtctcagtctcaagtaagagcatctctgtcgccttatttcattcacgac 299 | ||| ||| |||| | |||||||| ||||| ||||| || ||||||||||| || || Sbjct: 1182 ccttctgcattgtcttaacctcaagtatgagcacctctggcgtcttatttcatttacaac 1123 Query: 300 ttcattcactttcctggacaatgcattatcaaattgctccaatgccaacagatttggtgc 359 || || || ||||| || | | | || |||||||||||||| |||||| | |||| Sbjct: 1122 ttggttaaccttcctcgagagttcgttgtcaaattgctccaacgccaactgggctggtaa 1063 Query: 360 accagccaaggatgagagaccaaatatttgctccagggtggccgggttcaccgcatttcc 419 ||||||| || |||| ||| |||||||| |||||||| ||||| || ||| ||||| Sbjct: 1062 tgcagccaaagaagagacaccgaatatttgttccagggtagccggatttaccatgtttcc 1003 Query: 420 gacatagataaaaccatcctcgccattttccaataaataaatcccatcatcctgtatatt 479 ||||| || ||||||||||| ||||||||||||||||||| ||||| || |||| ||| Sbjct: 1002 tacataaattaaaccatcctcaccattttccaataaataaactccatcctcttgtacatt 943 Query: 480 ctcactattgagagtaaggggatttggaataagggaatcctcatcatcccttgatgtaag 539 |||||||||||| |||||||| | || ||||| ||||| || |||||||||||||| || Sbjct: 942 ctcactattgagcataaggggactgggtataagagaatcatcgtcatcccttgatgtgag 883 Query: 540 atcatggagagcaatcatcctagggaacaccaatggaatggctaataacacagaaactga 599 ||| |||| || ||||| |||||||||||||| |||| |||| || ||||||||||| Sbjct: 882 atcgtggataggaatcaatctagggaacaccaaaggaacagctagtactacagaaactga 823
>gb|BT016902.1| Zea mays clone Contig735 mRNA sequence Length = 987 Score = 176 bits (89), Expect = 6e-41 Identities = 416/525 (79%) Strand = Plus / Plus Query: 120 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 179 ||||||||||||||| ||||| |||||||| ||||| ||||| |||||| | ||||| | Sbjct: 438 tcaggtcatcttgctttggatctgcctgtggacatgcacgagaaactcctcgtaggagaa 497 Query: 180 gccaccaggtgctttgtcctccaccaacagcgaacggaagaaatctccagacgggtcgcc 239 | | |||||||| |||||||| | | | || ||||| ||||||||||| || ||||| Sbjct: 498 gacgccaggtgccttgtcctctattagaaatgaccggaaaaaatctccagatggttcgcc 557 Query: 240 ctttcggcacagtctcagtctcaagtaagagcatctctgtcgccttatttcattcacgac 299 | ||| ||| ||||| | |||||||| ||||| ||||| ||||| |||||||| || || Sbjct: 558 ccttctgcatagtcttaacctcaagtatgagcacctctggcgcctaatttcatttacaac 617 Query: 300 ttcattcactttcctggacaatgcattatcaaattgctccaatgccaacagatttggtgc 359 ||| || | ||||| || | | | || ||||| ||||||||||| ||| | |||| Sbjct: 618 ttcgttaatcttcctcgagagttcgttgtcaaactgctccaatgctaactgggctggtaa 677 Query: 360 accagccaaggatgagagaccaaatatttgctccagggtggccgggttcaccgcatttcc 419 ||||||| || |||| ||| |||||||| |||||||| ||||| || ||| |||||| Sbjct: 678 tgcagccaaagaagagacaccgaatatttgttccagggtagccggatttaccatatttcc 737 Query: 420 gacatagataaaaccatcctcgccattttccaataaataaatcccatcatcctgtatatt 479 || |||| | ||||||||| || |||||||||||||| | |||||| || |||| ||| Sbjct: 738 tacgtagactagaccatcctcaccgttttccaataaatagaccccatcctcttgtacatt 797 Query: 480 ctcactattgagagtaaggggatttggaataagggaatcctcatcatcccttgatgtaag 539 ||||| ||||| |||||||| |||| | ||||||||| |||||||||||||| || || Sbjct: 798 ttcacttttgagcataaggggacttggtacaagggaatcatcatcatcccttgacgtgag 857 Query: 540 atcatggagagcaatcatcctagggaacaccaatggaatggctaataacacagaaactga 599 |||||||| || || || ||||||||||||| |||| |||| || ||||||||||| Sbjct: 858 atcatggataggaaacaatctagggaacaccagaggaacagctagtactacagaaactga 917 Query: 600 ggagacaacagagacccaataggatcgatcgtctactctcccatc 644 ||||| | ||| | ||||||||| || || |||| || |||||| Sbjct: 918 cgagaccagagatatccaataggaacggtcatctaatcgcccatc 962
>gb|AY105862.1| Zea mays PCO076623 mRNA sequence Length = 924 Score = 170 bits (86), Expect = 4e-39 Identities = 416/526 (79%) Strand = Plus / Minus Query: 120 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 179 ||||||||||||||| ||||| |||||||| ||||| ||||| |||||| | ||||| | Sbjct: 830 tcaggtcatcttgctttggatctgcctgtggacatgcacgagaaactcctcgtaggagaa 771 Query: 180 gccaccaggtgctttgtcctccaccaacagcgaacggaagaaatctccagacgggtcgcc 239 | | |||||||| |||||||| | | | || ||||| ||||||||||| || ||||| Sbjct: 770 gacgccaggtgccttgtcctctattagaaatgaccggaaaaaatctccagatggttcgcc 711 Query: 240 ctttcggcacagtctcagtctcaagtaagagcatctctgtcgccttatttcattcacgac 299 | ||| ||| ||||||| |||||||| ||||| ||||| ||||| |||||||| || || Sbjct: 710 ccttctgcatagtctcaacctcaagtatgagcacctctggcgcctaatttcatttacaac 651 Query: 300 ttcattcactttcctggacaatgcattatcaaattgctccaatgccaacagatttggtgc 359 ||| || | ||||| || | | | || ||||| ||||||||||| ||| | |||| Sbjct: 650 ttcgttaatcttcctcgagagttcgttgtcaaactgctccaatgctaactgggctggtaa 591 Query: 360 accagccaaggatgagagaccaaatatttgctccagggtggccgggttcaccgcatttcc 419 ||||||| || |||| ||| |||||||| |||||||| ||||| || ||| ||||| Sbjct: 590 tgcagccaaagaagagacaccgaatatttgttccagggtagccggatttaccatgtttcc 531 Query: 420 gacatagataaaaccatcctcgccattttccaataaataaatcccatcatcctgtatatt 479 || |||| | ||||||||| || |||||||||||||| | |||||| || |||| ||| Sbjct: 530 tacgtagactagaccatcctcaccgttttccaataaatagaccccatcctcttgtacatt 471 Query: 480 ctcactattgagagtaaggggatttggaataagggaatcctcatcatcccttgatgtaag 539 ||||| ||||| |||| ||| |||| | ||||||||| ||||||||||| || || || Sbjct: 470 ttcacttttgagcataagtggacttggtacaagggaatcatcatcatccctggacgtgag 411 Query: 540 atcatggagagcaatcatcctagggaacaccaatggaatggctaataacacagaaactga 599 |||||||| || ||||| ||||||||||||| |||| |||| || ||||||||||| Sbjct: 410 atcatggataggaatcaatctagggaacaccagaggaacagctagtactacagaaactga 351 Query: 600 ggagacaacagagacccaataggatcgatcgtctactctcccatca 645 ||||| | ||| | ||||||||| || || |||| || ||||||| Sbjct: 350 cgagaccagagatatccaataggaacggtcatctaatcgcccatca 305
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 159 bits (80), Expect = 1e-35 Identities = 152/176 (86%) Strand = Plus / Plus Query: 350 gatttggtgcaccagccaaggatgagagaccaaatatttgctccagggtggccgggttca 409 |||||||| | |||||||| ||||| | ||||||||||||||| |||||||| ||||| | Sbjct: 13860971 gatttggtactccagccaaagatgaaacaccaaatatttgctcaagggtggcagggttta 13861030 Query: 410 ccgcatttccgacatagataaaaccatcctcgccattttccaataaataaatcccatcat 469 | |||||||||||||| | |||||||||||| ||||||||||| |||||||| ||| || Sbjct: 13861031 ctgcatttccgacataaacaaaaccatcctcaccattttccaacaaataaattccaaaat 13861090 Query: 470 cctgtatattctcactattgagagtaaggggatttggaataagggaatcctcatca 525 | | |||||||||||||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 13861091 caagcgtattctcactattgagtgtaagggggtttggtataagggaatcatcatca 13861146 Score = 131 bits (66), Expect = 3e-27 Identities = 111/126 (88%) Strand = Plus / Plus Query: 527 cccttgatgtaagatcatggagagcaatcatcctagggaacaccaatggaatggctaata 586 ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 13861229 cccttgacgcaagatcatggagggcaatcatcctagggaacaccaatggaatggctagta 13861288 Query: 587 acacagaaactgaggagacaacagagacccaataggatcgatcgtctactctcccatcat 646 ||||||||| ||| |||||| || ||||||||||| ||||| || | |||||||||| Sbjct: 13861289 acacagaaattgaagagacagttgacacccaataggaccgatcatccaatctcccatcag 13861348 Query: 647 tcctca 652 |||||| Sbjct: 13861349 tcctca 13861354 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 120 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 179 ||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 13860418 tcaggtcatcttgctttggatttgcctatgaacatgtacaaggaactctacataagaaag 13860477 Query: 180 gccaccaggtgctttgtcctccaccaacagcgaacggaagaaatctcc 227 |||||||||||| ||||| || ||||| || || |||||||||||||| Sbjct: 13860478 gccaccaggtgccttgtcttcgaccaatagtgagcggaagaaatctcc 13860525 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 259 ctcaagtaagagcatctctgtcgccttatttcattcacgacttcattcactttcctggac 318 ||||| || ||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 13860722 ctcaaataggagcatctctgtcgccttatttcattcaccacttcatttactttcctggaa 13860781 Query: 319 aatgcattatcaaattgctccaatgccaac 348 | | | |||||| ||||||||||| ||||| Sbjct: 13860782 agttcgttatcatattgctccaataccaac 13860811
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 159 bits (80), Expect = 1e-35 Identities = 152/176 (86%) Strand = Plus / Plus Query: 350 gatttggtgcaccagccaaggatgagagaccaaatatttgctccagggtggccgggttca 409 |||||||| | |||||||| ||||| | ||||||||||||||| |||||||| ||||| | Sbjct: 13815251 gatttggtactccagccaaagatgaaacaccaaatatttgctcaagggtggcagggttta 13815310 Query: 410 ccgcatttccgacatagataaaaccatcctcgccattttccaataaataaatcccatcat 469 | |||||||||||||| | |||||||||||| ||||||||||| |||||||| ||| || Sbjct: 13815311 ctgcatttccgacataaacaaaaccatcctcaccattttccaacaaataaattccaaaat 13815370 Query: 470 cctgtatattctcactattgagagtaaggggatttggaataagggaatcctcatca 525 | | |||||||||||||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 13815371 caagcgtattctcactattgagtgtaagggggtttggtataagggaatcatcatca 13815426 Score = 131 bits (66), Expect = 3e-27 Identities = 111/126 (88%) Strand = Plus / Plus Query: 527 cccttgatgtaagatcatggagagcaatcatcctagggaacaccaatggaatggctaata 586 ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 13815509 cccttgacgcaagatcatggagggcaatcatcctagggaacaccaatggaatggctagta 13815568 Query: 587 acacagaaactgaggagacaacagagacccaataggatcgatcgtctactctcccatcat 646 ||||||||| ||| |||||| || ||||||||||| ||||| || | |||||||||| Sbjct: 13815569 acacagaaattgaagagacagttgacacccaataggaccgatcatccaatctcccatcag 13815628 Query: 647 tcctca 652 |||||| Sbjct: 13815629 tcctca 13815634 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 120 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 179 ||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 13814698 tcaggtcatcttgctttggatttgcctatgaacatgtacaaggaactctacataagaaag 13814757 Query: 180 gccaccaggtgctttgtcctccaccaacagcgaacggaagaaatctcc 227 |||||||||||| ||||| || ||||| || || |||||||||||||| Sbjct: 13814758 gccaccaggtgccttgtcttcgaccaatagtgagcggaagaaatctcc 13814805 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 259 ctcaagtaagagcatctctgtcgccttatttcattcacgacttcattcactttcctggac 318 ||||| || ||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 13815002 ctcaaataggagcatctctgtcgccttatttcattcaccacttcatttactttcctggaa 13815061 Query: 319 aatgcattatcaaattgctccaatgccaac 348 | | | |||||| ||||||||||| ||||| Sbjct: 13815062 agttcgttatcatattgctccaataccaac 13815091
>emb|BX667525.2|CNS09SC3 Oryza sativa chromosome 12, . Partial sequence from PAC P0185F07 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 50021 Score = 159 bits (80), Expect = 1e-35 Identities = 152/176 (86%) Strand = Plus / Plus Query: 350 gatttggtgcaccagccaaggatgagagaccaaatatttgctccagggtggccgggttca 409 |||||||| | |||||||| ||||| | ||||||||||||||| |||||||| ||||| | Sbjct: 29774 gatttggtactccagccaaagatgaaacaccaaatatttgctcaagggtggcagggttta 29833 Query: 410 ccgcatttccgacatagataaaaccatcctcgccattttccaataaataaatcccatcat 469 | |||||||||||||| | |||||||||||| ||||||||||| |||||||| ||| || Sbjct: 29834 ctgcatttccgacataaacaaaaccatcctcaccattttccaacaaataaattccaaaat 29893 Query: 470 cctgtatattctcactattgagagtaaggggatttggaataagggaatcctcatca 525 | | |||||||||||||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 29894 caagcgtattctcactattgagtgtaagggggtttggtataagggaatcatcatca 29949 Score = 131 bits (66), Expect = 3e-27 Identities = 111/126 (88%) Strand = Plus / Plus Query: 527 cccttgatgtaagatcatggagagcaatcatcctagggaacaccaatggaatggctaata 586 ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 30032 cccttgacgcaagatcatggagggcaatcatcctagggaacaccaatggaatggctagta 30091 Query: 587 acacagaaactgaggagacaacagagacccaataggatcgatcgtctactctcccatcat 646 ||||||||| ||| |||||| || ||||||||||| ||||| || | |||||||||| Sbjct: 30092 acacagaaattgaagagacagttgacacccaataggaccgatcatccaatctcccatcag 30151 Query: 647 tcctca 652 |||||| Sbjct: 30152 tcctca 30157 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 120 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 179 ||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 29221 tcaggtcatcttgctttggatttgcctatgaacatgtacaaggaactctacataagaaag 29280 Query: 180 gccaccaggtgctttgtcctccaccaacagcgaacggaagaaatctcc 227 |||||||||||| ||||| || ||||| || || |||||||||||||| Sbjct: 29281 gccaccaggtgccttgtcttcgaccaatagtgagcggaagaaatctcc 29328 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 259 ctcaagtaagagcatctctgtcgccttatttcattcacgacttcattcactttcctggac 318 ||||| || ||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 29525 ctcaaataggagcatctctgtcgccttatttcattcaccacttcatttactttcctggaa 29584 Query: 319 aatgcattatcaaattgctccaatgccaac 348 | | | |||||| ||||||||||| ||||| Sbjct: 29585 agttcgttatcatattgctccaataccaac 29614
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Minus Query: 124 gtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaaggcca 183 |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 87657 gtcatcttgctctggatttgcctgtgcacatgcacaaggaactccacataggaaaggcca 87598 Query: 184 ccaggtgctttgtcctc 200 |||||||| |||||||| Sbjct: 87597 ccaggtgccttgtcctc 87581 Score = 77.8 bits (39), Expect = 4e-11 Identities = 111/135 (82%) Strand = Plus / Minus Query: 378 accaaatatttgctccagggtggccgggttcaccgcatttccgacatagataaaaccatc 437 |||||||||||| || ||| ||| ||| | ||| ||||||| ||||| || | |||||| Sbjct: 87085 accaaatatttgttcgaggatggtcggctctaccacatttcctacataaattagaccatc 87026 Query: 438 ctcgccattttccaataaataaatcccatcatcctgtatattctcactattgagagtaag 497 ||| ||||||||||||||||| | ||||| || ||||||| ||||||||||| |||| Sbjct: 87025 ctcaccattttccaataaatagactccatcttcacgtatattttcactattgagcataag 86966 Query: 498 gggatttggaataag 512 |||| | |||||||| Sbjct: 86965 gggactaggaataag 86951 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 527 cccttgatgtaagatcatggagagcaatcatcctagggaacaccaatggaatggctaata 586 |||||||||| |||||||| | | ||||| ||||||||||||||||||| ||||||| Sbjct: 86820 cccttgatgtgagatcatgaatcggaatcaatctagggaacaccaatggaacagctaata 86761 Query: 587 acacagaaactgaggagac 605 ||||||||||||||||| Sbjct: 86760 gaacagaaactgaggagac 86742 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 265 taagagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaatgca 324 ||||| |||||||| || ||||||||||| | |||||||| || |||| |||| | || Sbjct: 87351 taagaacatctctggcgtcttatttcattaattacttcatttaccttccgtgacagttca 87292 Query: 325 ttatcaaattgctccaa 341 || |||||||||||||| Sbjct: 87291 ttgtcaaattgctccaa 87275
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Minus Query: 124 gtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaaggcca 183 |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 16347222 gtcatcttgctctggatttgcctgtgcacatgcacaaggaactccacataggaaaggcca 16347163 Query: 184 ccaggtgctttgtcctc 200 |||||||| |||||||| Sbjct: 16347162 ccaggtgccttgtcctc 16347146 Score = 77.8 bits (39), Expect = 4e-11 Identities = 111/135 (82%) Strand = Plus / Minus Query: 378 accaaatatttgctccagggtggccgggttcaccgcatttccgacatagataaaaccatc 437 |||||||||||| || ||| ||| ||| | ||| ||||||| ||||| || | |||||| Sbjct: 16346650 accaaatatttgttcgaggatggtcggctctaccacatttcctacataaattagaccatc 16346591 Query: 438 ctcgccattttccaataaataaatcccatcatcctgtatattctcactattgagagtaag 497 ||| ||||||||||||||||| | ||||| || ||||||| ||||||||||| |||| Sbjct: 16346590 ctcaccattttccaataaatagactccatcttcacgtatattttcactattgagcataag 16346531 Query: 498 gggatttggaataag 512 |||| | |||||||| Sbjct: 16346530 gggactaggaataag 16346516 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 527 cccttgatgtaagatcatggagagcaatcatcctagggaacaccaatggaatggctaata 586 |||||||||| |||||||| | | ||||| ||||||||||||||||||| ||||||| Sbjct: 16346385 cccttgatgtgagatcatgaatcggaatcaatctagggaacaccaatggaacagctaata 16346326 Query: 587 acacagaaactgaggagac 605 ||||||||||||||||| Sbjct: 16346325 gaacagaaactgaggagac 16346307 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 265 taagagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaatgca 324 ||||| |||||||| || ||||||||||| | |||||||| || |||| |||| | || Sbjct: 16346916 taagaacatctctggcgtcttatttcattaattacttcatttaccttccgtgacagttca 16346857 Query: 325 ttatcaaattgctccaa 341 || |||||||||||||| Sbjct: 16346856 ttgtcaaattgctccaa 16346840
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Minus Query: 124 gtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaaggcca 183 |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 16437201 gtcatcttgctctggatttgcctgtgcacatgcacaaggaactccacataggaaaggcca 16437142 Query: 184 ccaggtgctttgtcctc 200 |||||||| |||||||| Sbjct: 16437141 ccaggtgccttgtcctc 16437125 Score = 77.8 bits (39), Expect = 4e-11 Identities = 111/135 (82%) Strand = Plus / Minus Query: 378 accaaatatttgctccagggtggccgggttcaccgcatttccgacatagataaaaccatc 437 |||||||||||| || ||| ||| ||| | ||| ||||||| ||||| || | |||||| Sbjct: 16436629 accaaatatttgttcgaggatggtcggctctaccacatttcctacataaattagaccatc 16436570 Query: 438 ctcgccattttccaataaataaatcccatcatcctgtatattctcactattgagagtaag 497 ||| ||||||||||||||||| | ||||| || ||||||| ||||||||||| |||| Sbjct: 16436569 ctcaccattttccaataaatagactccatcttcacgtatattttcactattgagcataag 16436510 Query: 498 gggatttggaataag 512 |||| | |||||||| Sbjct: 16436509 gggactaggaataag 16436495 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 527 cccttgatgtaagatcatggagagcaatcatcctagggaacaccaatggaatggctaata 586 |||||||||| |||||||| | | ||||| ||||||||||||||||||| ||||||| Sbjct: 16436364 cccttgatgtgagatcatgaatcggaatcaatctagggaacaccaatggaacagctaata 16436305 Query: 587 acacagaaactgaggagac 605 ||||||||||||||||| Sbjct: 16436304 gaacagaaactgaggagac 16436286 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 265 taagagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaatgca 324 ||||| |||||||| || ||||||||||| | |||||||| || |||| |||| | || Sbjct: 16436895 taagaacatctctggcgtcttatttcattaattacttcatttaccttccgtgacagttca 16436836 Query: 325 ttatcaaattgctccaa 341 || |||||||||||||| Sbjct: 16436835 ttgtcaaattgctccaa 16436819
>gb|BT016818.1| Zea mays clone Contig651 mRNA sequence Length = 686 Score = 97.6 bits (49), Expect = 5e-17 Identities = 184/229 (80%) Strand = Plus / Plus Query: 120 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 179 ||||||||||||||| |||||||||||||| ||||| || |||||||| || ||||| | Sbjct: 377 tcaggtcatcttgctttggatttgcctgtggacatgcacaaggaactcgacgtaggagaa 436 Query: 180 gccaccaggtgctttgtcctccaccaacagcgaacggaagaaatctccagacgggtcgcc 239 | | ||||| || ||||||||||| || | || ||||| ||||| ||||| || || || Sbjct: 437 gacgccaggcgccttgtcctccactaaaaatgaccggaaaaaatcaccagatggttcacc 496 Query: 240 ctttcggcacagtctcagtctcaagtaagagcatctctgtcgccttatttcattcacgac 299 | ||| ||| |||| | |||||||| ||||| ||||| || ||||||||||| || || Sbjct: 497 ccttctgcattgtcttaacctcaagtatgagcacctctggcgtcttatttcatttacaac 556 Query: 300 ttcattcactttcctggacaatgcattatcaaattgctccaatgccaac 348 ||| || || ||||| || | | | || |||||||||||||| |||||| Sbjct: 557 ttcgttaaccttcctcgagagttcgttgtcaaattgctccaacgccaac 605
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 414 atttccgacatagataaaaccat 436 ||||||||||||||||||||||| Sbjct: 174199 atttccgacatagataaaaccat 174177
>emb|AL772172.18| Mouse DNA sequence from clone RP23-478A2 on chromosome 4, complete sequence Length = 160595 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 atcatcctagggaacaccaat 573 ||||||||||||||||||||| Sbjct: 64270 atcatcctagggaacaccaat 64290
>ref|NM_102680.2| Arabidopsis thaliana AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding / nucleic acid binding AT1G29400 (AML5) transcript variant AT1G29400.1 mRNA, complete cds Length = 2880 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aatctctaccaaccaaaata 103 |||||||||||||||||||| Sbjct: 34 aatctctaccaaccaaaata 15
>ref|NM_179396.1| Arabidopsis thaliana AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding / nucleic acid binding AT1G29400 (AML5) transcript variant AT1G29400.2 mRNA, complete cds Length = 2921 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aatctctaccaaccaaaata 103 |||||||||||||||||||| Sbjct: 78 aatctctaccaaccaaaata 59
>gb|AC093102.2| Drosophila melanogaster clone BACR34C10, complete sequence Length = 179428 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 aaaccatcctcgccattttc 449 |||||||||||||||||||| Sbjct: 148846 aaaccatcctcgccattttc 148865
>gb|AY587061.1| Sus scrofa ataxia-telangiectasia mutated protein gene, exons 1 through 64 and complete cds Length = 153745 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 attgagagtaaggggatttg 505 |||||||||||||||||||| Sbjct: 28345 attgagagtaaggggatttg 28364
>gb|AY623111.1| Homo sapiens CDC14 cell division cycle 14 homolog A (S. cerevisiae) (CDC14A) gene, complete cds Length = 170869 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 caatcatcctagggaacacc 570 |||||||||||||||||||| Sbjct: 24612 caatcatcctagggaacacc 24593
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 4 gtaattaagtacgagtacaaactctttt 31 |||||||||||| ||||||||||||||| Sbjct: 16427078 gtaattaagtac-agtacaaactctttt 16427052
>emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in linkage group 15, complete sequence Length = 179357 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 atgaagcttcaggtcatcttgctc 135 |||||||||||| ||||||||||| Sbjct: 135763 atgaagcttcagttcatcttgctc 135786
>gb|AC122344.3| Mus musculus BAC clone RP23-364M19 from chromosome 9, complete sequence Length = 209165 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 aataaataaatcccatcatc 470 |||||||||||||||||||| Sbjct: 63923 aataaataaatcccatcatc 63904
>gb|AC110823.5| Mus musculus BAC clone RP24-366C12 from chromosome 7, complete sequence Length = 141116 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 aaagaaaaacggtccattta 53 |||||||||||||||||||| Sbjct: 42222 aaagaaaaacggtccattta 42203
>gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, complete sequence Length = 221903 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ccaaaatatcacaccaatga 115 |||||||||||||||||||| Sbjct: 103131 ccaaaatatcacaccaatga 103112
>emb|AL109924.20|HSDJ495K2 Human DNA sequence from clone RP3-495K2 on chromosome 6q26-27 Contains three novel genes and two CpG islands, complete sequence Length = 130296 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 453 taaataaatcccatcatcctgtatattc 480 ||||||||| |||| ||||||||||||| Sbjct: 30557 taaataaataccattatcctgtatattc 30584
>gb|AC133932.4| Oryza sativa chromosome 3 BAC OSJNBb0074M06 genomic sequence, complete sequence Length = 146775 Score = 40.1 bits (20), Expect = 9.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 4 gtaattaagtacgagtacaaactctttt 31 |||||||||||| ||||||||||||||| Sbjct: 40132 gtaattaagtac-agtacaaactctttt 40158
>gb|AY070368.1| Arabidopsis thaliana putative RNA-binding protein MEI2 (At1g29400) mRNA, complete cds Length = 2927 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aatctctaccaaccaaaata 103 |||||||||||||||||||| Sbjct: 73 aatctctaccaaccaaaata 54
>emb|AL672240.13| Mouse DNA sequence from clone RP23-27I16 on chromosome 11, complete sequence Length = 224603 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ttcattcacgacttcattca 307 |||||||||||||||||||| Sbjct: 105313 ttcattcacgacttcattca 105294
>gb|AC104457.2| Homo sapiens chromosome 1 clone RP5-837M10, complete sequence Length = 168505 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 caatcatcctagggaacacc 570 |||||||||||||||||||| Sbjct: 94050 caatcatcctagggaacacc 94069
>ref|NM_135561.1| Drosophila melanogaster CG13142-RA (CG13142), mRNA Length = 810 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 aaaccatcctcgccattttc 449 |||||||||||||||||||| Sbjct: 656 aaaccatcctcgccattttc 637
>gb|AY062613.1| Arabidopsis thaliana RNA-binding protein MEI2, putative (F15D2.30) mRNA, complete cds Length = 2856 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aatctctaccaaccaaaata 103 |||||||||||||||||||| Sbjct: 73 aatctctaccaaccaaaata 54
>dbj|AB179423.1| Macaca fascicularis testis cDNA clone: QtsA-19777, similar to human v-raf murine sarcoma viral oncogene homolog B1 (BRAF), mRNA, RefSeq: NM_004333.2 Length = 2849 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 accaggtgctttgtcctcca 202 |||||||||||||||||||| Sbjct: 2314 accaggtgctttgtcctcca 2333
>gb|BT023592.1| Drosophila melanogaster IP09347 full insert cDNA Length = 1051 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 aaaccatcctcgccattttc 449 |||||||||||||||||||| Sbjct: 808 aaaccatcctcgccattttc 789
>gb|BT023579.1| Drosophila melanogaster IP09447 full insert cDNA Length = 1017 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 aaaccatcctcgccattttc 449 |||||||||||||||||||| Sbjct: 774 aaaccatcctcgccattttc 755
>gb|BT023569.1| Drosophila melanogaster IP09547 full insert cDNA Length = 1021 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 aaaccatcctcgccattttc 449 |||||||||||||||||||| Sbjct: 773 aaaccatcctcgccattttc 754
>gb|AF256764.1|AF256764 Salmo salar clone BHMS129 microsatellite sequence Length = 522 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 atcccttgatgtaagatcat 544 |||||||||||||||||||| Sbjct: 204 atcccttgatgtaagatcat 223
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 4 gtaattaagtacgagtacaaactctttt 31 |||||||||||| ||||||||||||||| Sbjct: 16420711 gtaattaagtac-agtacaaactctttt 16420685
>gb|AC068667.6|AC068667 Arabidopsis thaliana chromosome 1 BAC F15D2 genomic sequence, complete sequence Length = 130653 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aatctctaccaaccaaaata 103 |||||||||||||||||||| Sbjct: 36872 aatctctaccaaccaaaata 36891
>gb|AF426190.1| Plagiomnium ellipticum 23S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, 4.5S ribosomal RNA gene, internal transcribed spacer 3, and 5S ribosomal RNA gene, complete sequence; 5S rRNA-trnR intergenic spacer, partial sequence; chloroplast genes for chloroplast products Length = 743 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 accaatggaatggctaataa 587 |||||||||||||||||||| Sbjct: 698 accaatggaatggctaataa 679
>gb|AF426189.1| Splachnum luteum 23S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, 4.5S ribosomal RNA gene, internal transcribed spacer 3, and 5S ribosomal RNA gene, complete sequence; 5S rRNA-trnR intergenic spacer, partial sequence; chloroplast genes for chloroplast products Length = 737 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 accaatggaatggctaataa 587 |||||||||||||||||||| Sbjct: 689 accaatggaatggctaataa 670
>gb|AC007451.1|AC007451 Drosophila melanogaster, chromosome 2L, region 31D1-31F4, BAC clones DS00953 and BACR48K04, complete sequence Length = 161754 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 aaaccatcctcgccattttc 449 |||||||||||||||||||| Sbjct: 100264 aaaccatcctcgccattttc 100245
>gb|AE003628.2| Drosophila melanogaster chromosome 2L, section 37 of 83 of the complete sequence Length = 269102 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 aaaccatcctcgccattttc 449 |||||||||||||||||||| Sbjct: 202532 aaaccatcctcgccattttc 202513
>gb|AF033642.1| Hylocomium splendens 23S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, 4.5S ribosomal RNA gene, internal transcribed spacer 3, and 5S ribosomal RNA gene, complete sequence, chloroplast genes for chloroplast RNAs Length = 765 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 accaatggaatggctaataa 587 |||||||||||||||||||| Sbjct: 711 accaatggaatggctaataa 692
>gb|AC150312.2| Mus musculus BAC clone RP23-336M16 from 7, complete sequence Length = 207429 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aaagaaaaacggtccattta 53 |||||||||||||||||||| Sbjct: 197196 aaagaaaaacggtccattta 197215
>gb|AC148975.3| Mus musculus BAC clone RP23-398E10 from 7, complete sequence Length = 209924 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aaagaaaaacggtccattta 53 |||||||||||||||||||| Sbjct: 31014 aaagaaaaacggtccattta 31033
>emb|AL590994.13| Mouse DNA sequence from clone RP23-382C19 on chromosome 11, complete sequence Length = 207814 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 656 ctatgcttttaaccaaggcc 675 |||||||||||||||||||| Sbjct: 55347 ctatgcttttaaccaaggcc 55328 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,899,080 Number of Sequences: 3902068 Number of extensions: 7899080 Number of successful extensions: 138101 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 137802 Number of HSP's gapped (non-prelim): 305 length of query: 686 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 663 effective length of database: 17,143,297,704 effective search space: 11366006377752 effective search space used: 11366006377752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)