ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9n04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105376.1| Zea mays PCO091943 mRNA sequence 135 2e-28
2ref|XM_469518.1| Oryza sativa (japonica cultivar-group), mRNA 125 2e-25
3dbj|AK106520.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
4dbj|AK106515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
5dbj|AK122108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 3e-21
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 80 1e-11
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
8gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033... 80 1e-11
9ref|NM_125625.2| Arabidopsis thaliana IRE (INCOMPLETE ROOT HAIR ... 46 0.14
10dbj|AB037133.1| Arabidopsis thaliana IRE gene for IRE, complete cds 46 0.14
11emb|BX511209.11| Zebrafish DNA sequence from clone CH211-129A6 i... 44 0.54
12emb|BX000437.7| Zebrafish DNA sequence from clone DKEY-106O5 in ... 44 0.54
13gb|AC093172.3| Homo sapiens BAC clone RP11-747K3 from 7, complet... 42 2.1
14gb|AC142340.1| Pan troglodytes BAC clone RP43-43B11 from 7, comp... 42 2.1
15gb|AC117460.7| Homo sapiens 3 BAC RP11-343D2 (Roswell Park Cance... 42 2.1
16emb|AL928677.6| Zebrafish DNA sequence from clone BUSM1-70B1 in ... 42 2.1
17emb|AL583917.1|MLEPRTN1 Mycobacterium leprae strain TN complete ... 42 2.1
18emb|AL035500.1|MLCL373 Mycobacterium leprae cosmid L373 42 2.1
19dbj|AB023033.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.1
20ref|NM_195541.1| Oryza sativa (japonica cultivar-group) hypothet... 40 8.4
21ref|XM_368899.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 8.4
22gb|BC068038.1| Danio rerio zgc:77713, mRNA (cDNA clone MGC:77713... 40 8.4
23gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, co... 40 8.4
24gb|AC125082.3| Mus musculus BAC clone RP24-90M24 from chromosome... 40 8.4
25gb|AC132253.5| Mus musculus BAC clone RP24-456H22 from chromosom... 40 8.4
26ref|XM_388733.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 8.4
27gb|AC107792.10| Mus musculus chromosome 17, clone RP23-83F8, com... 40 8.4
28gb|AC124445.4| Mus musculus BAC clone RP24-191B18 from chromosom... 40 8.4
29emb|CR759875.6| Zebrafish DNA sequence from clone DKEY-274K22 in... 40 8.4
30emb|CR405706.7| Zebrafish DNA sequence from clone CH211-233D12 i... 40 8.4
31emb|BX936325.9| Zebrafish DNA sequence from clone CH211-74P16 in... 40 8.4
32gb|AC120497.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.4
33gb|AC113339.1| Genomic sequence for Oryza sativa (japonica culti... 40 8.4
34ref|XM_681381.1| PREDICTED: Danio rerio similar to putative prot... 40 8.4
35dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
36ref|NM_205602.2| Danio rerio zgc:77713 (zgc:77713), mRNA 40 8.4
37gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
38emb|AL954713.11| Mouse DNA sequence from clone RP23-463K8 on chr... 40 8.4
39emb|AL844559.14| Zebrafish DNA sequence from clone DKEY-14K1, co... 40 8.4 
>gb|AY105376.1| Zea mays PCO091943 mRNA sequence
          Length = 1560

 Score =  135 bits (68), Expect = 2e-28
 Identities = 139/161 (86%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                       
Query: 455 ttgatggatgcaagttgtgaaagattcttgaacganaagttgctgaaagagtaattgaca 514
           |||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 871 ttgatggaagcaagttgtgatagattcttgaacgagaagttgctgaaagaataattgaca 812

                                                                       
Query: 515 tttgggccanattcaaagtcagtggggccacctccatgctcatcccccatgtcatcttgg 574
           ||||  | | ||||||| ||| || |||||  ||  || || ||||||||||||||||||
Sbjct: 811 tttgcactagattcaaactcattgaggcca--tcgctg-tcctcccccatgtcatcttgg 755

                                                    
Query: 575 tgattgctcacgcaactactgctgccactatggcttccatt 615
            | |||||||| ||||||||||| |||||| ||||||||||
Sbjct: 754 cggttgctcacacaactactgcttccactaaggcttccatt 714



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 105  ttcagggtttgtattctgattacagtaa 132
            ||||||| ||||||||||| ||||||||
Sbjct: 1260 ttcaggggttgtattctgaatacagtaa 1233
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>ref|XM_469518.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4752

 Score =  125 bits (63), Expect = 2e-25
 Identities = 129/151 (85%), Gaps = 3/151 (1%)
 Strand = Plus / Minus

                                                                        
Query: 465  caagttgtgaaagattcttgaacganaagttgctgaaagagtaattgacatttgggccan 524
            |||||||||| ||||||||||| || || ||||||||||| || |||||||||| || | 
Sbjct: 3757 caagttgtgatagattcttgaatgagaaattgctgaaagaatagttgacatttgagctag 3698

                                                                        
Query: 525  attcaaagtcagtggggccacctccatgctcatcccccatgtcatcttggtgattgctca 584
            ||||||| ||||||  |||||    |  |||||||||||| |||||||||||||||||||
Sbjct: 3697 attcaaactcagtgaagccact---agactcatcccccatatcatcttggtgattgctca 3641

                                           
Query: 585  cgcaactactgctgccactatggcttccatt 615
            | || ||||||||||||||| ||||||||||
Sbjct: 3640 cacagctactgctgccactaaggcttccatt 3610



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 60/65 (92%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 304  cactttcatatgtacaagatccacaccacccgagcgccttgtaaactgttttggttactt 363
            ||||||||||||||||||||| ||||||| ||||| ||||||||| || |||||||||||
Sbjct: 3916 cactttcatatgtacaagatctacaccacgcgagcaccttgtaaattg-tttggttactt 3858

                 
Query: 364  caaat 368
            |||||
Sbjct: 3857 caaat 3853



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                    
Query: 200  gctcctaggtgactcatgccaacttatggtcaaggatgtttcaccgacgatgacac 255
            ||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 4061 gctcctaggtgacgcattccaacttatggtcaaggatgtttcatcgatgatgacac 4006
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>dbj|AK106520.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-C10, full
            insert sequence
          Length = 2732

 Score =  125 bits (63), Expect = 2e-25
 Identities = 129/151 (85%), Gaps = 3/151 (1%)
 Strand = Plus / Minus

                                                                        
Query: 465  caagttgtgaaagattcttgaacganaagttgctgaaagagtaattgacatttgggccan 524
            |||||||||| ||||||||||| || || ||||||||||| || |||||||||| || | 
Sbjct: 2168 caagttgtgatagattcttgaatgagaaattgctgaaagaatagttgacatttgagctag 2109

                                                                        
Query: 525  attcaaagtcagtggggccacctccatgctcatcccccatgtcatcttggtgattgctca 584
            ||||||| ||||||  |||||    |  |||||||||||| |||||||||||||||||||
Sbjct: 2108 attcaaactcagtgaagccact---agactcatcccccatatcatcttggtgattgctca 2052

                                           
Query: 585  cgcaactactgctgccactatggcttccatt 615
            | || ||||||||||||||| ||||||||||
Sbjct: 2051 cacagctactgctgccactaaggcttccatt 2021



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 60/65 (92%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 304  cactttcatatgtacaagatccacaccacccgagcgccttgtaaactgttttggttactt 363
            ||||||||||||||||||||| ||||||| ||||| ||||||||| || |||||||||||
Sbjct: 2327 cactttcatatgtacaagatctacaccacgcgagcaccttgtaaattg-tttggttactt 2269

                 
Query: 364  caaat 368
            |||||
Sbjct: 2268 caaat 2264



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 200  gctcctaggtgactcatgccaacttatggtcaaggatgtttcaccgacgatgacac 255
            ||||||||||||| | | ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 2472 gctcctaggtgacgccttccaacttatggtcaaggatgtttcatcgatgatgacac 2417
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>dbj|AK106515.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A10, full
            insert sequence
          Length = 3151

 Score =  125 bits (63), Expect = 2e-25
 Identities = 129/151 (85%), Gaps = 3/151 (1%)
 Strand = Plus / Minus

                                                                        
Query: 465  caagttgtgaaagattcttgaacganaagttgctgaaagagtaattgacatttgggccan 524
            |||||||||| ||||||||||| || || ||||||||||| || |||||||||| || | 
Sbjct: 2322 caagttgtgatagattcttgaatgagaaattgctgaaagaatagttgacatttgagctag 2263

                                                                        
Query: 525  attcaaagtcagtggggccacctccatgctcatcccccatgtcatcttggtgattgctca 584
            ||||||| ||||||  |||||    |  |||||||||||| |||||||||||||||||||
Sbjct: 2262 attcaaactcagtgaagccact---agactcatcccccatatcatcttggtgattgctca 2206

                                           
Query: 585  cgcaactactgctgccactatggcttccatt 615
            | || ||||||||||||||| ||||||||||
Sbjct: 2205 cacagctactgctgccactaaggcttccatt 2175



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 60/65 (92%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 304  cactttcatatgtacaagatccacaccacccgagcgccttgtaaactgttttggttactt 363
            ||||||||||||||||||||| ||||||| ||||| ||||||||| || |||||||||||
Sbjct: 2481 cactttcatatgtacaagatctacaccacgcgagcaccttgtaaattg-tttggttactt 2423

                 
Query: 364  caaat 368
            |||||
Sbjct: 2422 caaat 2418



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                    
Query: 200  gctcctaggtgactcatgccaacttatggtcaaggatgtttcaccgacgatgacac 255
            ||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 2626 gctcctaggtgacgcattccaacttatggtcaaggatgtttcatcgatgatgacac 2571
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>dbj|AK122108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126F17, full
            insert sequence
          Length = 4613

 Score =  111 bits (56), Expect = 3e-21
 Identities = 128/151 (84%), Gaps = 5/151 (3%)
 Strand = Plus / Minus

                                                                        
Query: 465  caagttgtgaaagattcttgaacganaagttgctgaaagagtaattgacatttgggccan 524
            |||||||||| ||||||||||  || || ||||||||||| || |||||||||| || | 
Sbjct: 3784 caagttgtgatagattcttga--gagaaattgctgaaagaatagttgacatttgagctag 3727

                                                                        
Query: 525  attcaaagtcagtggggccacctccatgctcatcccccatgtcatcttggtgattgctca 584
            ||||||| ||||||  |||||    |  |||||||||||| |||||||||||||||||||
Sbjct: 3726 attcaaactcagtgaagccact---agactcatcccccatatcatcttggtgattgctca 3670

                                           
Query: 585  cgcaactactgctgccactatggcttccatt 615
            | || ||||||||||||||| ||||||||||
Sbjct: 3669 cacagctactgctgccactaaggcttccatt 3639



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 60/65 (92%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 304  cactttcatatgtacaagatccacaccacccgagcgccttgtaaactgttttggttactt 363
            ||||||||||||||||||||| ||||||| ||||| ||||||||| || |||||||||||
Sbjct: 3943 cactttcatatgtacaagatctacaccacgcgagcaccttgtaaattg-tttggttactt 3885

                 
Query: 364  caaat 368
            |||||
Sbjct: 3884 caaat 3880



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                    
Query: 200  gctcctaggtgactcatgccaacttatggtcaaggatgtttcaccgacgatgacac 255
            ||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 4088 gctcctaggtgacgcattccaacttatggtcaaggatgtttcatcgatgatgacac 4033
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 200      gctcctaggtgactcatgccaacttatggtcaaggatgtttcaccgacgatgacac 255
                ||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 28455811 gctcctaggtgacgcattccaacttatggtcaaggatgtttcatcgatgatgacac 28455866



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                       
Query: 561      ccatgtcatcttggtgattgctcacgcaactactgctgccactatggcttccatt 615
                |||| |||||||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 28457316 ccatatcatcttggtgattgctcacacagctactgctgccactaaggcttccatt 28457370



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 51/56 (91%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                        
Query: 313      atgtacaagatccacaccacccgagcgccttgtaaactgttttggttacttcaaat 368
                |||||||||||| ||||||| ||||| ||||||||| || ||||||||||||||||
Sbjct: 28456056 atgtacaagatctacaccacgcgagcaccttgtaaattg-tttggttacttcaaat 28456110



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                          
Query: 481      cttgaacganaagttgctgaaagagtaattgacatttgggccanattcaaagtcagtg 538
                |||||| || || ||||||||||| || |||||||||| || | ||||||| ||||||
Sbjct: 28457127 cttgaatgagaaattgctgaaagaatagttgacatttgagctagattcaaactcagtg 28457184
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 200      gctcctaggtgactcatgccaacttatggtcaaggatgtttcaccgacgatgacac 255
                ||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 28547135 gctcctaggtgacgcattccaacttatggtcaaggatgtttcatcgatgatgacac 28547190



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                       
Query: 561      ccatgtcatcttggtgattgctcacgcaactactgctgccactatggcttccatt 615
                |||| |||||||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 28548640 ccatatcatcttggtgattgctcacacagctactgctgccactaaggcttccatt 28548694



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 51/56 (91%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                        
Query: 313      atgtacaagatccacaccacccgagcgccttgtaaactgttttggttacttcaaat 368
                |||||||||||| ||||||| ||||| ||||||||| || ||||||||||||||||
Sbjct: 28547380 atgtacaagatctacaccacgcgagcaccttgtaaattg-tttggttacttcaaat 28547434



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                          
Query: 481      cttgaacganaagttgctgaaagagtaattgacatttgggccanattcaaagtcagtg 538
                |||||| || || ||||||||||| || |||||||||| || | ||||||| ||||||
Sbjct: 28548451 cttgaatgagaaattgctgaaagaatagttgacatttgagctagattcaaactcagtg 28548508
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>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
             sequence
          Length = 143681

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                     
Query: 200   gctcctaggtgactcatgccaacttatggtcaaggatgtttcaccgacgatgacac 255
             ||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 49941 gctcctaggtgacgcattccaacttatggtcaaggatgtttcatcgatgatgacac 49996



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                    
Query: 561   ccatgtcatcttggtgattgctcacgcaactactgctgccactatggcttccatt 615
             |||| |||||||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 51446 ccatatcatcttggtgattgctcacacagctactgctgccactaaggcttccatt 51500



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 51/56 (91%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                     
Query: 313   atgtacaagatccacaccacccgagcgccttgtaaactgttttggttacttcaaat 368
             |||||||||||| ||||||| ||||| ||||||||| || ||||||||||||||||
Sbjct: 50186 atgtacaagatctacaccacgcgagcaccttgtaaattg-tttggttacttcaaat 50240



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 481   cttgaacganaagttgctgaaagagtaattgacatttgggccanattcaaagtcagtg 538
             |||||| || || ||||||||||| || |||||||||| || | ||||||| ||||||
Sbjct: 51257 cttgaatgagaaattgctgaaagaatagttgacatttgagctagattcaaactcagtg 51314
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>ref|NM_125625.2| Arabidopsis thaliana IRE (INCOMPLETE ROOT HAIR ELONGATION); kinase
            AT5G62310 (IRE) mRNA, complete cds
          Length = 3557

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 452  tagttgatggatgcaagttgtgaaagattcttgaacganaagttgctgaa 501
            |||||||| || || |||||||| || ||||||||||| || ||||||||
Sbjct: 3484 tagttgatcgaagccagttgtgagaggttcttgaacgaaaaattgctgaa 3435
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>dbj|AB037133.1| Arabidopsis thaliana IRE gene for IRE, complete cds
          Length = 3842

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 452  tagttgatggatgcaagttgtgaaagattcttgaacganaagttgctgaa 501
            |||||||| || || |||||||| || ||||||||||| || ||||||||
Sbjct: 3557 tagttgatcgaagccagttgtgagaggttcttgaacgaaaaattgctgaa 3508
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>emb|BX511209.11| Zebrafish DNA sequence from clone CH211-129A6 in linkage group 5,
             complete sequence
          Length = 159017

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 54    catccccaatgacctgccacaa 75
             ||||||||||||||||||||||
Sbjct: 89253 catccccaatgacctgccacaa 89232
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>emb|BX000437.7| Zebrafish DNA sequence from clone DKEY-106O5 in linkage group 5, complete
              sequence
          Length = 178961

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 54     catccccaatgacctgccacaa 75
              ||||||||||||||||||||||
Sbjct: 171334 catccccaatgacctgccacaa 171355
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>gb|AC093172.3| Homo sapiens BAC clone RP11-747K3 from 7, complete sequence
          Length = 24934

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 48   ctactccatccccaatgacct 68
            |||||||||||||||||||||
Sbjct: 7013 ctactccatccccaatgacct 6993
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>gb|AC142340.1| Pan troglodytes BAC clone RP43-43B11 from 7, complete sequence
          Length = 173662

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    ctactccatccccaatgacct 68
             |||||||||||||||||||||
Sbjct: 95798 ctactccatccccaatgacct 95818
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>gb|AC117460.7| Homo sapiens 3 BAC RP11-343D2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 183595

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 350    tgttttggttacttcaaataa 370
              |||||||||||||||||||||
Sbjct: 139947 tgttttggttacttcaaataa 139927
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>emb|AL928677.6| Zebrafish DNA sequence from clone BUSM1-70B1 in linkage group 7
             Contains a novel gene similar to mouse and rodent CHRNA7
             (cholinergic receptor, nicotinic, alpha polypeptide 7), a
             novel gene and two CpG islands, complete sequence
          Length = 144076

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 360   acttcaaataaaacaaacctc 380
             |||||||||||||||||||||
Sbjct: 12955 acttcaaataaaacaaacctc 12935
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>emb|AL583917.1|MLEPRTN1 Mycobacterium leprae strain TN complete genome; segment 1/10
          Length = 344050

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 322    atccacaccacccgagcgcct 342
              |||||||||||||||||||||
Sbjct: 216707 atccacaccacccgagcgcct 216727
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>emb|AL035500.1|MLCL373 Mycobacterium leprae cosmid L373
          Length = 37304

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 322 atccacaccacccgagcgcct 342
           |||||||||||||||||||||
Sbjct: 854 atccacaccacccgagcgcct 874
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>dbj|AB023033.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K6M13
          Length = 77129

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 575   tgattgctcacgcaactactgctgccact 603
             ||||||| || ||||||||||||||||||
Sbjct: 58198 tgattgcgcaagcaactactgctgccact 58170
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>ref|NM_195541.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBb0047B19.4), mRNA
          Length = 2148

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  ttcaccgacgatgacaccac 258
            ||||||||||||||||||||
Sbjct: 1307 ttcaccgacgatgacaccac 1288
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>ref|XM_368899.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
            (MG00345.4) partial mRNA
          Length = 5859

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 475  aagattcttgaacganaagttgc 497
            ||||||||||||||| |||||||
Sbjct: 3843 aagattcttgaacgaaaagttgc 3821
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>gb|BC068038.1| Danio rerio zgc:77713, mRNA (cDNA clone MGC:77713 IMAGE:7000543),
            complete cds
          Length = 1926

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  ttttggttacttcaaataaa 371
            ||||||||||||||||||||
Sbjct: 1849 ttttggttacttcaaataaa 1868
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>gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, complete sequence
          Length = 235471

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     ttctgagtacagggaaacct 49
              ||||||||||||||||||||
Sbjct: 127586 ttctgagtacagggaaacct 127605
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>gb|AC125082.3| Mus musculus BAC clone RP24-90M24 from chromosome 10, complete sequence
          Length = 226256

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    tcctaggtgactcatgccaa 221
              ||||||||||||||||||||
Sbjct: 203564 tcctaggtgactcatgccaa 203583
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>gb|AC132253.5| Mus musculus BAC clone RP24-456H22 from chromosome 19, complete
             sequence
          Length = 194083

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    tacagggaaacctactccat 56
             ||||||||||||||||||||
Sbjct: 40251 tacagggaaacctactccat 40270
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>ref|XM_388733.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08557.1)
            partial mRNA
          Length = 4374

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 567  catcttggtgattgctcacg 586
            ||||||||||||||||||||
Sbjct: 2670 catcttggtgattgctcacg 2689
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>gb|AC107792.10| Mus musculus chromosome 17, clone RP23-83F8, complete sequence
          Length = 253013

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 493   gttgctgaaagagtaattgacatt 516
             |||||||||||||| |||||||||
Sbjct: 92308 gttgctgaaagagtgattgacatt 92285
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>gb|AC124445.4| Mus musculus BAC clone RP24-191B18 from chromosome 10, complete sequence
          Length = 190295

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    tcctaggtgactcatgccaa 221
              ||||||||||||||||||||
Sbjct: 133820 tcctaggtgactcatgccaa 133801
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>emb|CR759875.6| Zebrafish DNA sequence from clone DKEY-274K22 in linkage group 1,
             complete sequence
          Length = 216255

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   ttttggttacttcaaataaa 371
             ||||||||||||||||||||
Sbjct: 64644 ttttggttacttcaaataaa 64625
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>emb|CR405706.7| Zebrafish DNA sequence from clone CH211-233D12 in linkage group 1,
              complete sequence
          Length = 181249

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 352    ttttggttacttcaaataaa 371
              ||||||||||||||||||||
Sbjct: 155368 ttttggttacttcaaataaa 155349
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>emb|BX936325.9| Zebrafish DNA sequence from clone CH211-74P16 in linkage group 1,
             complete sequence
          Length = 185075

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   ttttggttacttcaaataaa 371
             ||||||||||||||||||||
Sbjct: 95847 ttttggttacttcaaataaa 95866
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>gb|AC120497.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0082N11, from chromosome 10, complete sequence
          Length = 127525

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   ttcaccgacgatgacaccac 258
             ||||||||||||||||||||
Sbjct: 86594 ttcaccgacgatgacaccac 86613
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>gb|AC113339.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBb0047B19, from chromosome 10,
             complete sequence
          Length = 137015

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   ttcaccgacgatgacaccac 258
             ||||||||||||||||||||
Sbjct: 19069 ttcaccgacgatgacaccac 19088
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>ref|XM_681381.1| PREDICTED: Danio rerio similar to putative protein of bilaterial
            origin (11.2 kD) (3E558) (LOC558192), mRNA
          Length = 1915

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  ttttggttacttcaaataaa 371
            ||||||||||||||||||||
Sbjct: 1885 ttttggttacttcaaataaa 1904
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 239     ttcaccgacgatgacaccac 258
               ||||||||||||||||||||
Sbjct: 7576075 ttcaccgacgatgacaccac 7576094
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>ref|NM_205602.2| Danio rerio zgc:77713 (zgc:77713), mRNA
          Length = 1926

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  ttttggttacttcaaataaa 371
            ||||||||||||||||||||
Sbjct: 1849 ttttggttacttcaaataaa 1868
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 239     ttcaccgacgatgacaccac 258
               ||||||||||||||||||||
Sbjct: 7580274 ttcaccgacgatgacaccac 7580293
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>emb|AL954713.11| Mouse DNA sequence from clone RP23-463K8 on chromosome 2, complete
              sequence
          Length = 171734

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 466    aagttgtgaaagattcttgaacga 489
              ||||| ||||||||||||||||||
Sbjct: 113542 aagttttgaaagattcttgaacga 113519
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>emb|AL844559.14| Zebrafish DNA sequence from clone DKEY-14K1, complete sequence
          Length = 216608

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    ttttggttacttcaaataaa 371
              ||||||||||||||||||||
Sbjct: 144422 ttttggttacttcaaataaa 144441


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,894,135
Number of Sequences: 3902068
Number of extensions: 4894135
Number of successful extensions: 115269
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115047
Number of HSP's gapped (non-prelim): 215
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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