>NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)|
          Length = 522

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = +1

Query: 400 TAAFQAVVVASPF*APSNLVSGPSDTWLLAFASPGSEPSAFLFRAGFTSADPTGSSA*EA 579
           T A  + V +S   AP+  V GPS T      +P +    F F  G T A P+G +   A
Sbjct: 122 TNAISSTVTSSQGTAPTGFVFGPSTT----SVAPATTSGGFSFTGGST-AQPSGFNIGSA 176

Query: 580 GSLARGAA 603
           G+ A+  A
Sbjct: 177 GNSAQPTA 184

>IMMI_ECOLI (P08701) Colicin-Ia immunity protein|
          Length = 111

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = -1

Query: 438 EWRCYHHCLKSCSLT-YPVL--YVDDFLVSIFLVHYMREPFFSVTRRRNGLICVYQGT 274
           ++R    C+  C +  YPV   Y++D  +      +    FF+ T  + GL+ VY GT
Sbjct: 30  KYRLLFWCISLCGMVLYPVAKWYIEDTALKFTRPDFWNSGFFADTPGKMGLLAVYTGT 87

>FTSK_ECOLI (P46889) DNA translocase ftsK|
          Length = 1329

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -2

Query: 608 SWAAPLASEPASHADEPVGSADVKPARKRKAEGSEPGEANANNHVSDGPE 459
           SWAAP+  EP +    PV S DV PA+   A    PG       ++  PE
Sbjct: 332 SWAAPV--EPVTQTP-PVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPE 378

>EXOC1_HUMAN (Q9NV70) Exocyst complex component 1 (Exocyst complex component|
           Sec3)
          Length = 893

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 125 RHLILHHKVSYISTSRNIYDPKGFDGASPI-QHSVELTVPNRRIFCR 262
           R L      S+++   N++  +G D +S + QHSVELT+PN   F R
Sbjct: 339 RELFARRLASHLN---NVFVQQGHDQSSTLAQHSVELTLPNHHPFHR 382

>ENV_BIV27 (P19557) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP62 (Surface protein); Coat protein GP40
           (Transmembrane glycoprotein)]
          Length = 904

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +2

Query: 41  IVEESIPTYSTTQQFPTNSSVSYKGENKRHLILHHKVSYISTSRNIYDPKGFDGASP 211
           +VE  +   S   Q     +  ++  N R  +LHH+VSY+     I   + F G  P
Sbjct: 590 VVERVVQNVSYIAQTQDQFTHLFRNINNRLNVLHHRVSYLEYVEEIRQKQVFFGCKP 646

>VGFR3_MOUSE (P35917) Vascular endothelial growth factor receptor 3 precursor (EC|
            2.7.10.1) (VEGFR-3) (Tyrosine-protein kinase receptor
            FLT4)
          Length = 1363

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 581  PASHADEPVGSADVKPARKRKAEGSEPGEANANNHVSDGPETKLEG 444
            P  H D P G  D +  R+R  +G++ G+   NN   +  +   EG
Sbjct: 1302 PGQHMDIPRGHPDPQGRRRRPTQGAQGGKVFYNNEYGEVSQPCTEG 1347

>EXOC1_MOUSE (Q8R3S6) Exocyst complex component 1 (Exocyst complex component|
           Sec3)
          Length = 893

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +2

Query: 173 NIYDPKGFDGASPI-QHSVELTVPNRRIFCR 262
           N++  +G D +S + QHSVELT+PN   F R
Sbjct: 352 NVFVQQGHDQSSTLAQHSVELTLPNHHPFHR 382

>MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1) (Protein nM15)|
          Length = 529

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 229 TYCPKSSDFLSTSKVR-ALVHTYKAITASRYRKKGLPHIMDKEYRDEEIIDVEHWVRQ 399
           T+ P SS F +TS+ + A ++ +K  +A+    K LP+ +   +   E +    WV Q
Sbjct: 62  TFAPSSSVFPATSQFQPASLNAFKGPSAASETPKSLPYALQDPFACVEALPAVPWVPQ 119

>IF2_SYMTH (Q67P86) Translation initiation factor IF-2|
          Length = 1044

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -2

Query: 602 AAPLASE--PASHADEPVGSADVKPARKRKAEGSEPGEANA 486
           A P A+E  PA  A++  G+A  KPAR     G+    A+A
Sbjct: 221 ATPAAAEQKPAGKAEQTAGAAQAKPARAEAGTGASSRPASA 261


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,135,347
Number of Sequences: 219361
Number of extensions: 2178432
Number of successful extensions: 5842
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5837
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)