ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9m05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 248 2e-62
2gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome... 248 2e-62
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 248 2e-62
4dbj|AK059226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
5ref|XM_470192.1| Oryza sativa (japonica cultivar-group), predic... 218 2e-53
6gb|AF244674.1|AF244674 Zea mays glutathione S-transferase GST 9 ... 135 2e-28
7gb|AY111697.1| Zea mays CL1117_-1 mRNA sequence 135 2e-28
8gb|AY111699.1| Zea mays CL1117_-2 mRNA sequence 123 8e-25
9gb|AF244678.1|AF244678 Zea mays glutathione S-transferase GST 13... 64 6e-07
10gb|AF244677.1|AF244677 Zea mays glutathione S-transferase GST 12... 56 2e-04
11gb|AY103863.1| Zea mays PCO132785 mRNA sequence 56 2e-04
12ref|XM_470191.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
13gb|AY533123.1| Oryza sativa (japonica cultivar-group) glutathion... 52 0.002
14dbj|AK059955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
15gb|AC122422.4| Mus musculus BAC clone RP24-169N11 from chromosom... 42 2.3
16gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosom... 42 2.3
17gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 9.2
18gb|AC099412.4| Homo sapiens BAC clone RP11-345D8 from 7, complet... 40 9.2
19emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chr... 40 9.2
20gb|AC159655.8| Mus musculus 6 BAC RP24-559F15 (Roswell Park Canc... 40 9.2
21ref|NR_002656.1| Caenorhabditis elegans strain Bristol N2 chromo... 40 9.2
22emb|Y07752.1|VCPHEROPH V.carteri mRNA for pherophorin-S 40 9.2
23gb|AC008013.8| Homo sapiens 12 BAC RP11-551L14 (Roswell Park Can... 40 9.2
24emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left termina... 40 9.2
25gb|AC137723.6| Homo sapiens chromosome 17, clone RP11-1182P23, c... 40 9.2
26emb|Z81141.2|CEZC47 Caenorhabditis elegans Cosmid ZC47, complete... 40 9.2
27dbj|AP006114.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 9.2
28emb|AL732392.8| Mouse DNA sequence from clone RP23-171G10 on chr... 40 9.2

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  248 bits (125), Expect = 2e-62
 Identities = 318/381 (83%), Gaps = 1/381 (0%)
 Strand = Plus / Plus

                                                                           
Query: 161     tactcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcgg 220
               |||||||| || || ||||||||| | ||||||||||| ||||||| ||| |||| ||| 
Sbjct: 1932995 tactcgaatgcacccggatgctccctctgcatcttgaccacctgcttccatgtctcgcgc 1933054

                                                                           
Query: 221     ctcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatcccc 280
                | |||||||||||| ||||||| |||||||| ||||||   |||||||||||| | || 
Sbjct: 1933055 tttgagatttggtcgtaccaccttgccacattcttcctgccagtgaagagcttccttcct 1933114

                                                                           
Query: 281     ctctccgagctcacaatgtactgcgagtccggaaggtgacagaggtcagccagggtgaac 340
               ||||| || ||||||||||| || ||||  ||||||||| | ||||||||||||||||||
Sbjct: 1933115 ctctcagaactcacaatgtaatgtgagtttggaaggtgagaaaggtcagccagggtgaac 1933174

                                                                           
Query: 341     tcatcgccagccaggtactcgttcttcgagagtatttcatcgtagacgttgaggacttgc 400
               ||||| |||||||||||||| ||||| |||||||| ||||| || || ||||||||||||
Sbjct: 1933175 tcatcaccagccaggtactcattctttgagagtatctcatcataaacattgaggacttgc 1933234

                                                                           
Query: 401     tgaagcttcctctcattctctgcaatgaccatgtggtcttgagggatttccaaaacagga 460
               ||||| ||| ||||||| |||||||| ||    ||||| || || || | || |   |||
Sbjct: 1933235 tgaagtttcttctcattttctgcaataacagcatggtcctggggaatgttcagatgggga 1933294

                                                                           
Query: 461     gcaaatgccagctgaaacacgagggccgagctgggagggtttgaagttctgagcctctgc 520
               |||||||| || || || |||||||||||||||||||||  |||| || ||||| |||||
Sbjct: 1933295 gcaaatgcgagatggaagacgagggccgagctgggaggg-ctgaaattttgagcttctgc 1933353

                                    
Query: 521     ttgcagccactgttctattga 541
               ||| |||||||||||||||||
Sbjct: 1933354 ttgaagccactgttctattga 1933374



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                             
Query: 323     aggtcagccagggtgaactcatcgccagccaggtactcgttcttcg 368
               ||||| |||||||||||||| ||||| || ||||||| ||||||||
Sbjct: 1929171 aggtcggccagggtgaactcgtcgccggcgaggtacttgttcttcg 1929216



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Plus

                                                                           
Query: 162     actcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcggc 221
               |||||||||||||||| |||||  | ||||||||||| ||||||| ||| |    |||| 
Sbjct: 1929004 actcgaacgcgccagggtgctcgctctgcatcttgaccacctgcttccaggaggcgcggt 1929063

                                                                           
Query: 222     tcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatccccc 281
               | ||||| |  ||| |||||||||| || |  ||| ||||||||||||||||| | ||||
Sbjct: 1929064 tggagatctcctcgtaccacctcgcgacgtgcttcttggaggtgaagagcttcttgcccc 1929123

                 
Query: 282     tc 283
               ||
Sbjct: 1929124 tc 1929125



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 633     aacaagagtcttgtcaccatgcttgaatgtcac 665
               ||||||||||||||| ||||||||||| |||||
Sbjct: 1929569 aacaagagtcttgtcgccatgcttgaaagtcac 1929601



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>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06,
             complete sequence
          Length = 122218

 Score =  248 bits (125), Expect = 2e-62
 Identities = 318/381 (83%), Gaps = 1/381 (0%)
 Strand = Plus / Minus

                                                                         
Query: 161   tactcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcgg 220
             |||||||| || || ||||||||| | ||||||||||| ||||||| ||| |||| ||| 
Sbjct: 42416 tactcgaatgcacccggatgctccctctgcatcttgaccacctgcttccatgtctcgcgc 42357

                                                                         
Query: 221   ctcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatcccc 280
              | |||||||||||| ||||||| |||||||| ||||||   |||||||||||| | || 
Sbjct: 42356 tttgagatttggtcgtaccaccttgccacattcttcctgccagtgaagagcttccttcct 42297

                                                                         
Query: 281   ctctccgagctcacaatgtactgcgagtccggaaggtgacagaggtcagccagggtgaac 340
             ||||| || ||||||||||| || ||||  ||||||||| | ||||||||||||||||||
Sbjct: 42296 ctctcagaactcacaatgtaatgtgagtttggaaggtgagaaaggtcagccagggtgaac 42237

                                                                         
Query: 341   tcatcgccagccaggtactcgttcttcgagagtatttcatcgtagacgttgaggacttgc 400
             ||||| |||||||||||||| ||||| |||||||| ||||| || || ||||||||||||
Sbjct: 42236 tcatcaccagccaggtactcattctttgagagtatctcatcataaacattgaggacttgc 42177

                                                                         
Query: 401   tgaagcttcctctcattctctgcaatgaccatgtggtcttgagggatttccaaaacagga 460
             ||||| ||| ||||||| |||||||| ||    ||||| || || || | || |   |||
Sbjct: 42176 tgaagtttcttctcattttctgcaataacagcatggtcctggggaatgttcagatgggga 42117

                                                                         
Query: 461   gcaaatgccagctgaaacacgagggccgagctgggagggtttgaagttctgagcctctgc 520
             |||||||| || || || |||||||||||||||||||||  |||| || ||||| |||||
Sbjct: 42116 gcaaatgcgagatggaagacgagggccgagctgggaggg-ctgaaattttgagcttctgc 42058

                                  
Query: 521   ttgcagccactgttctattga 541
             ||| |||||||||||||||||
Sbjct: 42057 ttgaagccactgttctattga 42037



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                         
Query: 162   actcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcggc 221
             |||||||||||||||| |||||  | ||||||||||| ||||||| ||| |    |||| 
Sbjct: 46407 actcgaacgcgccagggtgctcgctctgcatcttgaccacctgcttccaggaggcgcggt 46348

                                                                         
Query: 222   tcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatccccc 281
             | ||||| |  ||| |||||||||| || |  ||| ||||||||||||||||| | ||||
Sbjct: 46347 tggagatctcctcgtaccacctcgcgacgtgcttcttggaggtgaagagcttcttgcccc 46288

               
Query: 282   tc 283
             ||
Sbjct: 46287 tc 46286



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 323   aggtcagccagggtgaactcatcgccagccaggtactcgttcttcg 368
             ||||| |||||||||||||| ||||| || ||||||| ||||||||
Sbjct: 46240 aggtcggccagggtgaactcgtcgccggcgaggtacttgttcttcg 46195



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 633   aacaagagtcttgtcaccatgcttgaatgtcac 665
             ||||||||||||||| ||||||||||| |||||
Sbjct: 45842 aacaagagtcttgtcgccatgcttgaaagtcac 45810



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  248 bits (125), Expect = 2e-62
 Identities = 318/381 (83%), Gaps = 1/381 (0%)
 Strand = Plus / Plus

                                                                           
Query: 161     tactcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcgg 220
               |||||||| || || ||||||||| | ||||||||||| ||||||| ||| |||| ||| 
Sbjct: 1932993 tactcgaatgcacccggatgctccctctgcatcttgaccacctgcttccatgtctcgcgc 1933052

                                                                           
Query: 221     ctcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatcccc 280
                | |||||||||||| ||||||| |||||||| ||||||   |||||||||||| | || 
Sbjct: 1933053 tttgagatttggtcgtaccaccttgccacattcttcctgccagtgaagagcttccttcct 1933112

                                                                           
Query: 281     ctctccgagctcacaatgtactgcgagtccggaaggtgacagaggtcagccagggtgaac 340
               ||||| || ||||||||||| || ||||  ||||||||| | ||||||||||||||||||
Sbjct: 1933113 ctctcagaactcacaatgtaatgtgagtttggaaggtgagaaaggtcagccagggtgaac 1933172

                                                                           
Query: 341     tcatcgccagccaggtactcgttcttcgagagtatttcatcgtagacgttgaggacttgc 400
               ||||| |||||||||||||| ||||| |||||||| ||||| || || ||||||||||||
Sbjct: 1933173 tcatcaccagccaggtactcattctttgagagtatctcatcataaacattgaggacttgc 1933232

                                                                           
Query: 401     tgaagcttcctctcattctctgcaatgaccatgtggtcttgagggatttccaaaacagga 460
               ||||| ||| ||||||| |||||||| ||    ||||| || || || | || |   |||
Sbjct: 1933233 tgaagtttcttctcattttctgcaataacagcatggtcctggggaatgttcagatgggga 1933292

                                                                           
Query: 461     gcaaatgccagctgaaacacgagggccgagctgggagggtttgaagttctgagcctctgc 520
               |||||||| || || || |||||||||||||||||||||  |||| || ||||| |||||
Sbjct: 1933293 gcaaatgcgagatggaagacgagggccgagctgggaggg-ctgaaattttgagcttctgc 1933351

                                    
Query: 521     ttgcagccactgttctattga 541
               ||| |||||||||||||||||
Sbjct: 1933352 ttgaagccactgttctattga 1933372



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                             
Query: 323     aggtcagccagggtgaactcatcgccagccaggtactcgttcttcg 368
               ||||| |||||||||||||| ||||| || ||||||| ||||||||
Sbjct: 1929169 aggtcggccagggtgaactcgtcgccggcgaggtacttgttcttcg 1929214



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Plus

                                                                           
Query: 162     actcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcggc 221
               |||||||||||||||| |||||  | ||||||||||| ||||||| ||| |    |||| 
Sbjct: 1929002 actcgaacgcgccagggtgctcgctctgcatcttgaccacctgcttccaggaggcgcggt 1929061

                                                                           
Query: 222     tcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatccccc 281
               | ||||| |  ||| |||||||||| || |  ||| ||||||||||||||||| | ||||
Sbjct: 1929062 tggagatctcctcgtaccacctcgcgacgtgcttcttggaggtgaagagcttcttgcccc 1929121

                 
Query: 282     tc 283
               ||
Sbjct: 1929122 tc 1929123



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 633     aacaagagtcttgtcaccatgcttgaatgtcac 665
               ||||||||||||||| ||||||||||| |||||
Sbjct: 1929567 aacaagagtcttgtcgccatgcttgaaagtcac 1929599



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>dbj|AK059226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D08, full
           insert sequence
          Length = 631

 Score =  248 bits (125), Expect = 2e-62
 Identities = 318/381 (83%), Gaps = 1/381 (0%)
 Strand = Plus / Minus

                                                                       
Query: 161 tactcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcgg 220
           |||||||| || || ||||||||| | ||||||||||| ||||||| ||| |||| ||| 
Sbjct: 389 tactcgaatgcacccggatgctccctctgcatcttgaccacctgcttccatgtctcgcgc 330

                                                                       
Query: 221 ctcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatcccc 280
            | |||||||||||| ||||||| |||||||| ||||||   |||||||||||| | || 
Sbjct: 329 tttgagatttggtcgtaccaccttgccacattcttcctgccagtgaagagcttccttcct 270

                                                                       
Query: 281 ctctccgagctcacaatgtactgcgagtccggaaggtgacagaggtcagccagggtgaac 340
           ||||| || ||||||||||| || ||||  ||||||||| | ||||||||||||||||||
Sbjct: 269 ctctcagaactcacaatgtaatgtgagtttggaaggtgagaaaggtcagccagggtgaac 210

                                                                       
Query: 341 tcatcgccagccaggtactcgttcttcgagagtatttcatcgtagacgttgaggacttgc 400
           ||||| |||||||||||||| ||||| |||||||| ||||| || || ||||||||||||
Sbjct: 209 tcatcaccagccaggtactcattctttgagagtatctcatcataaacattgaggacttgc 150

                                                                       
Query: 401 tgaagcttcctctcattctctgcaatgaccatgtggtcttgagggatttccaaaacagga 460
           ||||| ||| ||||||| |||||||| ||    ||||| || || || | || |   |||
Sbjct: 149 tgaagtttcttctcattttctgcaataacagcatggtcctggggaatgttcagatgggga 90

                                                                       
Query: 461 gcaaatgccagctgaaacacgagggccgagctgggagggtttgaagttctgagcctctgc 520
           |||||||| || || || |||||||||||||||||||||  |||| || ||||| |||||
Sbjct: 89  gcaaatgcgagatggaagacgagggccgagctgggaggg-ctgaaattttgagcttctgc 31

                                
Query: 521 ttgcagccactgttctattga 541
           ||| |||||||||||||||||
Sbjct: 30  ttgaagccactgttctattga 10



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>ref|XM_470192.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 531

 Score =  218 bits (110), Expect = 2e-53
 Identities = 227/266 (85%)
 Strand = Plus / Minus

                                                                       
Query: 161 tactcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcgg 220
           |||||||| || || ||||||||| | ||||||||||| ||||||| ||| |||| ||| 
Sbjct: 530 tactcgaatgcacccggatgctccctctgcatcttgaccacctgcttccatgtctcgcgc 471

                                                                       
Query: 221 ctcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatcccc 280
            | |||||||||||| ||||||| |||||||| ||||||   |||||||||||| | || 
Sbjct: 470 tttgagatttggtcgtaccaccttgccacattcttcctgccagtgaagagcttccttcct 411

                                                                       
Query: 281 ctctccgagctcacaatgtactgcgagtccggaaggtgacagaggtcagccagggtgaac 340
           ||||| || ||||||||||| || ||||  ||||||||| | ||||||||||||||||||
Sbjct: 410 ctctcagaactcacaatgtaatgtgagtttggaaggtgagaaaggtcagccagggtgaac 351

                                                                       
Query: 341 tcatcgccagccaggtactcgttcttcgagagtatttcatcgtagacgttgaggacttgc 400
           ||||| |||||||||||||| ||||| |||||||| ||||| || || ||||||||||||
Sbjct: 350 tcatcaccagccaggtactcattctttgagagtatctcatcataaacattgaggacttgc 291

                                     
Query: 401 tgaagcttcctctcattctctgcaat 426
           ||||| ||| ||||||| ||||||||
Sbjct: 290 tgaagtttcttctcattttctgcaat 265



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>gb|AF244674.1|AF244674 Zea mays glutathione S-transferase GST 9 mRNA, complete cds
          Length = 999

 Score =  135 bits (68), Expect = 2e-28
 Identities = 185/224 (82%)
 Strand = Plus / Minus

                                                                       
Query: 161 tactcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcgg 220
           |||| |||||| |||||||| ||| | ||||||||||| |||||| |||| |||| ||| 
Sbjct: 749 tacttgaacgcaccaggatgttccttctgcatcttgacgacctgcacccatgtctcgcgc 690

                                                                       
Query: 221 ctcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatcccc 280
            ||||||    |||  ||||  |||||||||| ||| ||  ||||||||||||| | || 
Sbjct: 689 ttcgagagcctgtcataccatttcgccacattcttcttgttggtgaagagcttccttcct 630

                                                                       
Query: 281 ctctccgagctcacaatgtactgcgagtccggaaggtgacagaggtcagccagggtgaac 340
           ||||| | | | || ||||| ||||||| |||||||||| | ||||| ||||||||||||
Sbjct: 629 ctctcggtgtttacgatgtagtgcgagttcggaaggtgagacaggtcggccagggtgaac 570

                                                       
Query: 341 tcatcgccagccaggtactcgttcttcgagagtatttcatcgta 384
           ||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct: 569 tcatcaccagccaggtactcgttcttggagagtatttcgtcgta 526



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 165/203 (81%), Gaps = 4/203 (1%)
 Strand = Plus / Minus

                                                                       
Query: 467 gccagctgaaacacgagggccgagctgggagggtttgaagttctgagcctctgcttgcag 526
           |||||||||||||| || || ||||||||||||    |||||||| || ||||| || ||
Sbjct: 434 gccagctgaaacacaagcgcagagctgggagggcca-aagttctgggcttctgcctggag 376

                                                                       
Query: 527 ccactgttctattgagggcccgttccagagaaccagtcccattagaggttcctgtttccc 586
           |||||||||||| || | ||||||| |||| |||||  |||| ||||| || ||||||| 
Sbjct: 375 ccactgttctatcgatg-cccgttctagagcaccagatccat-agaggctcttgtttccg 318

                                                                       
Query: 587 tggtttgggaactgggtacagaggtaccggcaaatagcccttggat-aacaagagtcttg 645
           |  ||||| |||||| | || | ||||||||| ||  |||||| || |||||| || |||
Sbjct: 317 taatttggaaactggttgcaaacgtaccggcatatgtcccttgaatcaacaagggttttg 258

                                  
Query: 646 tcaccatgcttgaatgtcacttg 668
           || ||||||||||| ||||||||
Sbjct: 257 tcgccatgcttgaaggtcacttg 235



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>gb|AY111697.1| Zea mays CL1117_-1 mRNA sequence
          Length = 977

 Score =  135 bits (68), Expect = 2e-28
 Identities = 185/224 (82%)
 Strand = Plus / Minus

                                                                       
Query: 161 tactcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcgg 220
           |||| |||||| |||||||| ||| | ||||||||||| |||||| |||| |||| ||| 
Sbjct: 749 tacttgaacgcaccaggatgttccttctgcatcttgacgacctgcacccatgtctcgcgc 690

                                                                       
Query: 221 ctcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatcccc 280
            ||||||    |||  ||||  |||||||||| ||| ||  ||||||||||||| | || 
Sbjct: 689 ttcgagagcctgtcataccatttcgccacattcttcttgttggtgaagagcttccttcct 630

                                                                       
Query: 281 ctctccgagctcacaatgtactgcgagtccggaaggtgacagaggtcagccagggtgaac 340
           ||||| | | | || ||||| ||||||| |||||||||| | ||||| ||||||||||||
Sbjct: 629 ctctcggtgtttacgatgtagtgcgagttcggaaggtgagacaggtcggccagggtgaac 570

                                                       
Query: 341 tcatcgccagccaggtactcgttcttcgagagtatttcatcgta 384
           ||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct: 569 tcatcaccagccaggtactcgttcttggagagtatttcgtcgta 526



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 165/203 (81%), Gaps = 4/203 (1%)
 Strand = Plus / Minus

                                                                       
Query: 467 gccagctgaaacacgagggccgagctgggagggtttgaagttctgagcctctgcttgcag 526
           |||||||||||||| || || ||||||||||||    |||||||| || ||||| || ||
Sbjct: 434 gccagctgaaacacaagcgcagagctgggagggcca-aagttctgggcttctgcctggag 376

                                                                       
Query: 527 ccactgttctattgagggcccgttccagagaaccagtcccattagaggttcctgtttccc 586
           |||||||||||| || | ||||||| |||| |||||  |||| ||||| || ||||||| 
Sbjct: 375 ccactgttctatcgatg-cccgttctagagcaccagatccat-agaggctcttgtttccg 318

                                                                       
Query: 587 tggtttgggaactgggtacagaggtaccggcaaatagcccttggat-aacaagagtcttg 645
           |  ||||| |||||| | || | ||||||||| ||  |||||| || |||||| || |||
Sbjct: 317 taatttggaaactggttgcaaacgtaccggcatatgtcccttgaatcaacaagggttttg 258

                                  
Query: 646 tcaccatgcttgaatgtcacttg 668
           || ||||||||||| ||||||||
Sbjct: 257 tcgccatgcttgaaggtcacttg 235



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>gb|AY111699.1| Zea mays CL1117_-2 mRNA sequence
          Length = 633

 Score =  123 bits (62), Expect = 8e-25
 Identities = 185/226 (81%)
 Strand = Plus / Minus

                                                                       
Query: 162 actcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcggc 221
           |||||||||| |||||||| ||| | ||||||||  | ||||||| |||||||| |||  
Sbjct: 435 actcgaacgcaccaggatgttccttctgcatcttagcgacctgcttccacgtctcgcgct 376

                                                                       
Query: 222 tcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatccccc 281
           ||||||  |  ||| ||||| | ||||| || ||| ||   |||||||||||| | || |
Sbjct: 375 tcgagagcttctcgtaccacttggccacgttcttcttgttagtgaagagcttccttcctc 316

                                                                       
Query: 282 tctccgagctcacaatgtactgcgagtccggaaggtgacagaggtcagccagggtgaact 341
           |||| | | |||| ||||| ||||||| ||| |||||  ||||||| |||||||||||||
Sbjct: 315 tctcggtgttcacgatgtagtgcgagttcgggaggtgggagaggtcggccagggtgaact 256

                                                         
Query: 342 catcgccagccaggtactcgttcttcgagagtatttcatcgtagac 387
           | ||||||||||||||||||||| |||||||||| || ||||||||
Sbjct: 255 cgtcgccagccaggtactcgttcctcgagagtatctcgtcgtagac 210



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>gb|AF244678.1|AF244678 Zea mays glutathione S-transferase GST 13 mRNA, complete cds
          Length = 1134

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 181/230 (78%), Gaps = 3/230 (1%)
 Strand = Plus / Minus

                                                                       
Query: 162 actcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcggc 221
           ||||||||||||| || |||||| | ||||||||||  ||||||  |||||  | |||| 
Sbjct: 736 actcgaacgcgccggggtgctccctctgcatcttgatgacctgcctccacgagtcgcggg 677

                                                                       
Query: 222 tcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatccccc 281
           | ||||| | |||| ||||||| || || |  ||||||| ||||||||||||  | ||||
Sbjct: 676 tggagatcttgtcgtaccacctggcgacgtgcttcctggcggtgaagagctttctgcccc 617

                                                                       
Query: 282 tctc---cgagctcacaatgtactgcgagtccggaaggtgacagaggtcagccagggtga 338
           | ||    ||| | || ||||| || ||||  || |||||  ||||||| ||||||||||
Sbjct: 616 tgtcggaggagttgacgatgtagtgggagttgggcaggtgggagaggtcggccagggtga 557

                                                             
Query: 339 actcatcgccagccaggtactcgttcttcgagagtatttcatcgtagacg 388
           | || ||||| || |||||||||||||| ||||| || || |||||||||
Sbjct: 556 agtcgtcgccggcgaggtactcgttcttggagaggatgtcgtcgtagacg 507



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>gb|AF244677.1|AF244677 Zea mays glutathione S-transferase GST 12 mRNA, complete cds
          Length = 1198

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 321 agaggtcagccagggtgaactcatcgccagccaggtactcgttcttcgagagtatttcat 380
           ||||||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || |
Sbjct: 617 agaggtcggccagtgtgaagtcgtcgccggcgaggtactcgttcttggagaggatgtcgt 558

                   
Query: 381 cgtagacg 388
           ||||||||
Sbjct: 557 cgtagacg 550



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>gb|AY103863.1| Zea mays PCO132785 mRNA sequence
          Length = 959

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 321 agaggtcagccagggtgaactcatcgccagccaggtactcgttcttcgagagtatttcat 380
           ||||||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || |
Sbjct: 640 agaggtcggccagtgtgaagtcgtcgccggcgaggtactcgttcttggagaggatgtcgt 581

                   
Query: 381 cgtagacg 388
           ||||||||
Sbjct: 580 cgtagacg 573



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>ref|XM_470191.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 678

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 162 actcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcggc 221
           |||||||||||||||| |||||  | ||||||||||| ||||||| ||| |    |||| 
Sbjct: 676 actcgaacgcgccagggtgctcgctctgcatcttgaccacctgcttccaggaggcgcggt 617

                                                                       
Query: 222 tcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatccccc 281
           | ||||| |  ||| |||||||||| || |  ||| ||||||||||||||||| | ||||
Sbjct: 616 tggagatctcctcgtaccacctcgcgacgtgcttcttggaggtgaagagcttcttgcccc 557

             
Query: 282 tc 283
           ||
Sbjct: 556 tc 555



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 323 aggtcagccagggtgaactcatcgccagccaggtactcgttcttcg 368
           ||||| |||||||||||||| ||||| || ||||||| ||||||||
Sbjct: 509 aggtcggccagggtgaactcgtcgccggcgaggtacttgttcttcg 464



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 633 aacaagagtcttgtcaccatgcttgaatgtcac 665
           ||||||||||||||| ||||||||||| |||||
Sbjct: 201 aacaagagtcttgtcgccatgcttgaaagtcac 169



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>gb|AY533123.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase
           GSTF15 mRNA, complete cds
          Length = 678

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 162 actcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcggc 221
           |||||||||||||||| |||||  | ||||||||||| ||||||| ||| |    |||| 
Sbjct: 676 actcgaacgcgccagggtgctcgctctgcatcttgaccacctgcttccaggaggcgcggt 617

                                                                       
Query: 222 tcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatccccc 281
           | ||||| |  ||| |||||||||| || |  ||| ||||||||||||||||| | ||||
Sbjct: 616 tggagatctcctcgtaccacctcgcgacgtgcttcttggaggtgaagagcttcttgcccc 557

             
Query: 282 tc 283
           ||
Sbjct: 556 tc 555



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 323 aggtcagccagggtgaactcatcgccagccaggtactcgttcttcg 368
           ||||| |||||||||||||| ||||| || ||||||| ||||||||
Sbjct: 509 aggtcggccagggtgaactcgtcgccggcgaggtacttgttcttcg 464



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 633 aacaagagtcttgtcaccatgcttgaatgtcac 665
           ||||||||||||||| ||||||||||| |||||
Sbjct: 201 aacaagagtcttgtcgccatgcttgaaagtcac 169



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>dbj|AK059955.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D02, full
           insert sequence
          Length = 951

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 162 actcgaacgcgccaggatgctccatttgcatcttgacaacctgctcccacgtcttgcggc 221
           |||||||||||||||| |||||  | ||||||||||| ||||||| ||| |    |||| 
Sbjct: 784 actcgaacgcgccagggtgctcgctctgcatcttgaccacctgcttccaggaggcgcggt 725

                                                                       
Query: 222 tcgagatttggtcgaaccacctcgccacatttttcctggaggtgaagagcttcatccccc 281
           | ||||| |  ||| |||||||||| || |  ||| ||||||||||||||||| | ||||
Sbjct: 724 tggagatctcctcgtaccacctcgcgacgtgcttcttggaggtgaagagcttcttgcccc 665

             
Query: 282 tc 283
           ||
Sbjct: 664 tc 663



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 323 aggtcagccagggtgaactcatcgccagccaggtactcgttcttcg 368
           ||||| |||||||||||||| ||||| || ||||||| ||||||||
Sbjct: 617 aggtcggccagggtgaactcgtcgccggcgaggtacttgttcttcg 572



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 633 aacaagagtcttgtcaccatgcttgaatgtcac 665
           ||||||||||||||| ||||||||||| |||||
Sbjct: 309 aacaagagtcttgtcgccatgcttgaaagtcac 277



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>gb|AC122422.4| Mus musculus BAC clone RP24-169N11 from chromosome 17, complete sequence
          Length = 181626

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 393    ggacttgctgaagcttcctctcatt 417
              |||||||||||||||| ||||||||
Sbjct: 119348 ggacttgctgaagcttgctctcatt 119372



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>gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosome 17, complete
            sequence
          Length = 206481

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 393  ggacttgctgaagcttcctctcatt 417
            |||||||||||||||| ||||||||
Sbjct: 1877 ggacttgctgaagcttgctctcatt 1901



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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 165     cgaacgcgccaggatgctcc 184
               ||||||||||||||||||||
Sbjct: 2291102 cgaacgcgccaggatgctcc 2291083



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>gb|AC099412.4| Homo sapiens BAC clone RP11-345D8 from 7, complete sequence
          Length = 45701

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    gaaagaacacatgaaaataa 97
             ||||||||||||||||||||
Sbjct: 28189 gaaagaacacatgaaaataa 28170



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>emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chromosome 10 Contains the
             5' end of the RSU1 gene for Ras suppressor protein 1, the
             3' end of the CUBN gene for cubilin (intrinsic
             factor-cobalamin receptor) and a CpG island, complete
             sequence
          Length = 184703

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 572   aggttcctgtttccctggtt 591
             ||||||||||||||||||||
Sbjct: 74640 aggttcctgtttccctggtt 74659



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>gb|AC159655.8| Mus musculus 6 BAC RP24-559F15 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 200889

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 515   ctctgcttgcagccactgtt 534
             ||||||||||||||||||||
Sbjct: 84411 ctctgcttgcagccactgtt 84430



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>ref|NR_002656.1| Caenorhabditis elegans strain Bristol N2 chromosome III
          Length = 963

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 330 ccagggtgaactcatcgcca 349
           ||||||||||||||||||||
Sbjct: 844 ccagggtgaactcatcgcca 825



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>emb|Y07752.1|VCPHEROPH V.carteri mRNA for pherophorin-S
          Length = 1800

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 501  ttgaagttctgagcctctgc 520
            ||||||||||||||||||||
Sbjct: 1160 ttgaagttctgagcctctgc 1141



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>gb|AC008013.8| Homo sapiens 12 BAC RP11-551L14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 168986

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 269   agcttcatccccctctccgagctc 292
             ||||||||||||||||||| ||||
Sbjct: 23398 agcttcatccccctctccgtgctc 23421



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>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 204    gctcccacgtcttgcggctcgaga 227
              ||||||||||| ||||||||||||
Sbjct: 213590 gctcccacgtcgtgcggctcgaga 213567



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>gb|AC137723.6| Homo sapiens chromosome 17, clone RP11-1182P23, complete sequence
          Length = 57644

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 412   ctcattctctgcaatgacca 431
             ||||||||||||||||||||
Sbjct: 40619 ctcattctctgcaatgacca 40638



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>emb|Z81141.2|CEZC47 Caenorhabditis elegans Cosmid ZC47, complete sequence
          Length = 26347

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   ccagggtgaactcatcgcca 349
             ||||||||||||||||||||
Sbjct: 17196 ccagggtgaactcatcgcca 17215



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   ccagggtgaactcatcgcca 349
             ||||||||||||||||||||
Sbjct: 12728 ccagggtgaactcatcgcca 12747



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>dbj|AP006114.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT43M15, TM0198a,
             complete sequence
          Length = 75051

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 73    atgacgaaagaacacatgaaaataagat 100
             |||| ||||||| |||||||||||||||
Sbjct: 30383 atgaagaaagaatacatgaaaataagat 30410



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>emb|AL732392.8| Mouse DNA sequence from clone RP23-171G10 on chromosome X, complete
             sequence
          Length = 188116

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 582   ttccctggtttgggaactgg 601
             ||||||||||||||||||||
Sbjct: 59695 ttccctggtttgggaactgg 59676


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,036,752
Number of Sequences: 3902068
Number of extensions: 5036752
Number of successful extensions: 90224
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90073
Number of HSP's gapped (non-prelim): 144
length of query: 675
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 652
effective length of database: 17,143,297,704
effective search space: 11177430103008
effective search space used: 11177430103008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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